==> r1107_3drna_corrected_rpr.pdb <==
REMARK 250 Model edited with rna-tools
REMARK 250  ver 3.8.13.1+39.gca2dada6.dirty 
REMARK 250  https://github.com/mmagnus/rna-tools 
REMARK 250  Wed Aug 30 09:52:12 2023
REMARK 250 Fixed atoms/residues:
REMARK 250  - add OP3 at the beginning of the chain  in chain: A <Residue G het=  resseq=1 icode= > residue # 1
ATOM      1  P     G A   1      98.715  73.881 165.828  1.00 11.89           P  
ATOM      2  OP1   G A   1      99.244  75.219 165.468  1.00 14.35           O  
ATOM      3  OP2   G A   1      98.921  73.335 167.179  1.00 12.68           O  
ATOM      4  O5'   G A   1      97.153  73.799 165.554  1.00 10.34           O  

==> r1107_df_rpr.pdb <==
REMARK 250 Model edited with rna-tools
REMARK 250  ver 3.8.13.1+39.gca2dada6.dirty 
REMARK 250  https://github.com/mmagnus/rna-tools 
REMARK 250  Wed Aug 30 09:52:13 2023
ATOM      1  P     G A   1      -2.098   1.994  -0.460  1.00  0.00           P  
ATOM      2  OP1   G A   1      -2.275   2.403   0.957  1.00  0.00           O  
ATOM      3  OP2   G A   1      -2.041   3.101  -1.427  1.00  0.00           O  
ATOM      4  O5'   G A   1      -0.829   1.169  -0.734  1.00  0.00           O  
ATOM      5  C5'   G A   1      -0.112   0.406   0.211  1.00  0.00           C  
ATOM      6  C4'   G A   1       1.195   0.157  -0.515  1.00  0.00           C  

==> r1107_drfold_rpr.pdb <==
/home/ubuntu/.local/lib/python3.8/site-packages/Bio/PDB/PDBIO.py:200: BiopythonWarning: Missing occupancy in atom ('', 0, 'A', (' ', 1, ' '), ('P', ' ')) written as blank
  warnings.warn(
/home/ubuntu/.local/lib/python3.8/site-packages/Bio/PDB/PDBIO.py:200: BiopythonWarning: Missing occupancy in atom ('', 0, 'A', (' ', 1, ' '), ('OP1', ' ')) written as blank
  warnings.warn(
/home/ubuntu/.local/lib/python3.8/site-packages/Bio/PDB/PDBIO.py:200: BiopythonWarning: Missing occupancy in atom ('', 0, 'A', (' ', 1, ' '), ('OP2', ' ')) written as blank
  warnings.warn(
/home/ubuntu/.local/lib/python3.8/site-packages/Bio/PDB/PDBIO.py:200: BiopythonWarning: Missing occupancy in atom ('', 0, 'A', (' ', 1, ' '), ("O5'", ' ')) written as blank
  warnings.warn(
/home/ubuntu/.local/lib/python3.8/site-packages/Bio/PDB/PDBIO.py:200: BiopythonWarning: Missing occupancy in atom ('', 0, 'A', (' ', 1, ' '), ("C5'", ' ')) written as blank
  warnings.warn(

==> r1107_native_rpr.pdb <==
REMARK 250 Model edited with rna-tools
REMARK 250  ver 3.8.13.1+39.gca2dada6.dirty 
REMARK 250  https://github.com/mmagnus/rna-tools 
REMARK 250  Wed Aug 30 09:52:14 2023
REMARK 250 Fixed atoms/residues:
REMARK 250  - add OP3 at the beginning of the chain  in chain: A <Residue G het=  resseq=1 icode= > residue # 1
ATOM      1  P     G A   1      -7.198  13.213   7.212  1.00 11.89           P  
ATOM      2  OP1   G A   1      -8.610  13.647   7.083  1.00 14.35           O  
ATOM      3  OP2   G A   1      -6.241  14.008   7.999  1.00 12.68           O  
ATOM      4  O5'   G A   1      -7.112  11.733   7.781  1.00 10.34           O  

==> r1107_rf_rpr.pdb <==
REMARK 250 Model edited with rna-tools
REMARK 250  ver 3.8.13.1+39.gca2dada6.dirty 
REMARK 250  https://github.com/mmagnus/rna-tools 
REMARK 250  Wed Aug 30 09:52:14 2023
ATOM      1  P     G A   1      41.549 -29.037 -14.956  1.00 73.35           P  
ATOM      2  OP1   G A   1      40.641 -29.262 -13.803  1.00 73.35           O  
ATOM      3  OP2   G A   1      41.928 -27.650 -15.330  1.00 73.35           O  
ATOM      4  O5'   G A   1      42.887 -29.865 -14.709  1.00 73.35           O  
ATOM      5  C5'   G A   1      42.851 -31.274 -14.536  1.00 73.35           C  
ATOM      6  C4'   G A   1      44.216 -31.828 -14.212  1.00 73.35           C  

==> r1107_rhofold_rpr.pdb <==
REMARK 250 Model edited with rna-tools
REMARK 250  ver 3.8.13.1+39.gca2dada6.dirty 
REMARK 250  https://github.com/mmagnus/rna-tools 
REMARK 250  Wed Aug 30 09:52:15 2023
REMARK 250 Fixed atoms/residues:
REMARK 250  - add OP3 at the beginning of the chain  in chain: A <Residue G het=  resseq=1 icode= > residue # 1
ATOM      1  P     G A   1      -5.665  -1.359   1.278  1.00 11.89           P  
ATOM      2  OP1   G A   1      -6.503  -2.389   1.937  1.00 14.35           O  
ATOM      3  OP2   G A   1      -4.264  -1.646   0.930  1.00 12.68           O  
ATOM      4  O5'   G A   1      -6.352  -0.841  -0.057  1.00 10.34           O  

==> r1107_rnac_rpr.pdb <==
REMARK 250 Model edited with rna-tools
REMARK 250  ver 3.8.13.1+39.gca2dada6.dirty 
REMARK 250  https://github.com/mmagnus/rna-tools 
REMARK 250  Wed Aug 30 09:52:15 2023
REMARK 250 Fixed atoms/residues:
REMARK 250  - add OP3 at the beginning of the chain  in chain: A <Residue G het=  resseq=1 icode= > residue # 1
ATOM      1  P     G A   1      -0.352   0.098  -2.121  1.00 11.89           P  
ATOM      2  OP1   G A   1       0.359  -0.896  -2.962  1.00 14.35           O  
ATOM      3  OP2   G A   1      -1.823   0.127  -2.080  1.00 12.68           O  
ATOM      4  O5'   G A   1       0.128   0.006  -0.610  1.00 10.34           O  

==> r1107_trr_rpr.pdb <==
REMARK 250 Model edited with rna-tools
REMARK 250  ver 3.8.13.1+39.gca2dada6.dirty 
REMARK 250  https://github.com/mmagnus/rna-tools 
REMARK 250  Wed Aug 30 09:52:16 2023
ATOM      1  P     G A   1      -0.123  -0.301  -0.653  1.00  0.00           P  
ATOM      2  OP1   G A   1      -0.355  -1.539  -1.443  1.00  0.00           O  
ATOM      3  OP2   G A   1      -1.186   0.235   0.239  1.00  0.00           O  
ATOM      4  O5'   G A   1       1.246  -0.379   0.169  1.00  0.00           O  
ATOM      5  C5'   G A   1       2.183   0.669  -0.008  1.00  0.00           C  
ATOM      6  C4'   G A   1       3.018   1.027   1.205  1.00  0.00           C  
DONE!