==> af1_minimized_rpr.pdb <==
REMARK 250 Model edited with rna-tools
REMARK 250  ver 3.8.13.1+39.gca2dada6.dirty 
REMARK 250  https://github.com/mmagnus/rna-tools 
REMARK 250  Wed Jan 21 15:03:10 2026
ATOM      1  P     C A   1      59.812  31.178  -5.424  1.00 30.83      A    P  
ATOM      2  OP1   C A   1      59.008  30.927  -6.641  1.00 28.78      A    O  
ATOM      3  OP2   C A   1      58.908  31.605  -4.334  1.00 27.73      A    O  
ATOM      4  O5'   C A   1      60.585  29.844  -4.999  1.00 31.19      A    O  
ATOM      5  C5'   C A   1      61.850  29.474  -5.584  1.00 29.81      A    C  
ATOM      6  C4'   C A   1      62.334  28.138  -5.014  1.00 30.50      A    C  

==> boltz2_minimized_rpr.pdb <==
REMARK 250 Model edited with rna-tools
REMARK 250  ver 3.8.13.1+39.gca2dada6.dirty 
REMARK 250  https://github.com/mmagnus/rna-tools 
REMARK 250  Wed Jan 21 15:03:12 2026
ATOM      1  P     C A   1     -11.765 -15.215  10.338  1.00 20.49           P  
ATOM      2  OP1   C A   1     -12.543 -14.879   9.125  1.00 20.49           O  
ATOM      3  OP2   C A   1     -10.670 -14.239  10.531  1.00 20.49           O  
ATOM      4  O5'   C A   1     -12.721 -15.216  11.618  1.00 20.49           O  
ATOM      5  C5'   C A   1     -13.885 -16.060  11.707  1.00 20.49           C  
ATOM      6  C4'   C A   1     -14.464 -16.040  13.128  1.00 20.49           C  

==> farfar1_minimized_rpr.pdb <==
REMARK 250 Model edited with rna-tools
REMARK 250  ver 3.8.13.1+39.gca2dada6.dirty 
REMARK 250  https://github.com/mmagnus/rna-tools 
REMARK 250  Wed Jan 21 15:03:13 2026
REMARK 250 Fixed atoms/residues:
REMARK 250  - add OP3 at the beginning of the chain  in chain: A <Residue C het=  resseq=1 icode= > residue # 1
ATOM      1  P     C A   1       0.081   0.047  -0.203  1.00 11.89           P  
ATOM      2  OP1   C A   1      -0.342   0.927  -1.319  1.00 14.35           O  
ATOM      3  OP2   C A   1      -0.328  -1.367  -0.170  1.00 12.68           O  
ATOM      4  O5'   C A   1       1.661   0.051  -0.048  1.00 10.34           O  

==> farfar3_minimized_rpr.pdb <==
REMARK 250 Model edited with rna-tools
REMARK 250  ver 3.8.13.1+39.gca2dada6.dirty 
REMARK 250  https://github.com/mmagnus/rna-tools 
REMARK 250  Wed Jan 21 15:03:15 2026
REMARK 250 Fixed atoms/residues:
REMARK 250  - add OP3 at the beginning of the chain  in chain: A <Residue C het=  resseq=1 icode= > residue # 1
ATOM      1  P     C A   1       0.108  -0.252  -0.131  1.00 11.89           P  
ATOM      2  OP1   C A   1      -0.398   0.574  -1.253  1.00 14.35           O  
ATOM      3  OP2   C A   1      -0.202  -1.690  -0.063  1.00 12.68           O  
ATOM      4  O5'   C A   1       1.687  -0.137  -0.012  1.00 10.34           O  

==> simrna_minimized_rpr.pdb <==
REMARK 250 Model edited with rna-tools
REMARK 250  ver 3.8.13.1+39.gca2dada6.dirty 
REMARK 250  https://github.com/mmagnus/rna-tools 
REMARK 250  Wed Jan 21 15:03:16 2026
ATOM      1  P     C A   1      12.458  44.989  76.524  1.00  0.00           P  
ATOM      2  OP1   C A   1      13.330  45.435  75.414  1.00  0.00           O  
ATOM      3  OP2   C A   1      11.295  45.900  76.612  1.00  0.00           O  
ATOM      4  O5'   C A   1      11.933  43.486  76.323  1.00  0.00           O  
ATOM      5  C5'   C A   1      11.236  42.820  77.398  1.00  0.00           C  
ATOM      6  C4'   C A   1      10.587  41.509  76.939  1.00  0.00           C  
DONE!