============================================================================= Reading config file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/90a3fe85/tmp/apt_refx/configfile.txt ============================================================================= ----------------------------------------------------------------------------- Warning: Non-parallel version of QRNA cannot spawn threads. Warning: More threads than cores available. Parameters to be used: Number of minimization steps (NSTEPS): 5000 Golden section step sizes: maximal (MAXSTEP): 0.0001 minimal (MINSTEP): 1e-08 Verbosity (VERBOSE): 1 Write output every: 100 steps (WRITEFREQ) Record trajectory (TRAJECTORY): disabled Pedantic treatment of molecules (PEDANTICMOL): disabled Van der Waals cutoff radius (CUTOFF): 12 Born generalized solvent (USEBORN): disabled Constraints on secondary struct. (SSCONSTR): enabled Auto-detection of secondary struct. (SSDETECT): enabled Secondary structure (SECSTRUCT): none specified Hydrogen bonds (HBONDS): enabled Electrostatics (ELECTR): enabled van der Waals interactions (VANDERWAALS): enabled Anti-blow-up protection (BLOWGUARD): enabled Occupancy as positional restraint (POSRESTRAINTS): disabled Restraints description (RESTRFILE): none Number of parallel threads: 1 ----------------------------------------------------------------------------- Internal Warning: unknown atom type(s) in bond: C2 H5 Internal Warning: unknown atom type(s) in bond: C2 N* Internal Warning: unknown atom type(s) in bond: C2 NB Internal Warning: unknown atom type(s) in bond: C C1 Internal Warning: unknown atom type(s) in bond: CA C1 Internal Warning: unknown atom type(s) in bond: C1 C1 Internal Warning: unknown atom type(s) in bond: C1 CT Internal Warning: unknown atom type(s) in bond: C1 HA Internal Warning: unknown atom type(s) in bond: C1 H4 Internal Warning: unknown atom type(s) in bond: C1 N* Internal Warning: unknown atoms in angle: H5 C2 N* Internal Warning: unknown atoms in angle: H5 C2 NB Internal Warning: unknown atoms in angle: N* C2 NB Internal Warning: unknown atoms in angle: CB N* C2 Internal Warning: unknown atoms in angle: C2 N* CT Internal Warning: unknown atoms in angle: CB NB C2 Internal Warning: unknown atoms in angle: C1 C NA Internal Warning: unknown atoms in angle: C1 C O Internal Warning: unknown atoms in angle: C1 CA N2 Internal Warning: unknown atoms in angle: C1 CA NC Internal Warning: unknown atoms in angle: C C1 C1 Internal Warning: unknown atoms in angle: C C1 CT Internal Warning: unknown atoms in angle: C C1 HA Internal Warning: unknown atoms in angle: C C1 H4 Internal Warning: unknown atoms in angle: CA C1 C1 Internal Warning: unknown atoms in angle: CA C1 HA Internal Warning: unknown atoms in angle: CA C1 H4 Internal Warning: unknown atoms in angle: C1 C1 CT Internal Warning: unknown atoms in angle: C1 C1 HA Internal Warning: unknown atoms in angle: C1 C1 H4 Internal Warning: unknown atoms in angle: C1 C1 N* Internal Warning: unknown atoms in angle: H4 C1 N* Internal Warning: unknown atoms in angle: H1 CT C1 Internal Warning: unknown atoms in angle: HC CT C1 Internal Warning: unknown atoms in angle: C N* C1 Internal Warning: unknown atoms in angle: C1 N* CT Internal Warning: unknown atom(s) in dihedral: X C2 N* X Internal Warning: unknown atom(s) in dihedral: X C2 NB X Internal Warning: unknown atom(s) in dihedral: X C C1 X Internal Warning: unknown atom(s) in dihedral: X CA C1 X Internal Warning: unknown atom(s) in dihedral: X C1 C1 X Internal Warning: unknown atom(s) in dihedral: X C1 CT X Internal Warning: unknown atom(s) in dihedral: X C1 N* X Internal Warning: unknown atom(s) in dihedral: HC CT C1 C1 Internal Warning: unknown atom(s) in dihedral: HC CT C1 C1 Internal Warning: unknown atom(s) in dihedral: C1 C1 C O Internal Warning: unknown atom(s) in dihedral: C1 C1 C O Internal Warning: unknown atom(s) in dihedral: OS CT N* C2 Internal Warning: unknown atom(s) in dihedral: OS CT N* C2 Internal Warning: unknown atom(s) in dihedral: OS CT N* C2 Internal Warning: unknown atom(s) in dihedral: OS CT N* C1 Internal Warning: unknown atom(s) in dihedral: OS CT N* C1 Internal Warning: unknown atom(s) in dihedral: OS CT N* C1 Internal Warning: unknown atom(s) in dihedral: OS CT N* C1 Internal Warning: unknown atom(s) in improper: C C1 N* CT Internal Warning: unknown atom(s) in improper: C C1 C1 CT Internal Warning: unknown atom(s) in improper: C1 N2 CA NC Initializing... Generic atom descriptions read: 47 Generic bond descriptions read: 199 Generic angle descriptions read: 567 Generic dihedral descriptions read: 812 Generic improper descriptions read: 116 Generic vdW descriptions read: 47 ----------------------------------------------------------------------------- ============================================================================= Reading PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/90a3fe85/tmp/apt_refx/apt.pdb ============================================================================= Atom's 1 H5T residue renamed to RG5 Atom's 2 O5' residue renamed to RG5 Atom's 3 C5' residue renamed to RG5 Atom's 4 H5'1 residue renamed to RG5 Atom's 5 H5'2 residue renamed to RG5 Atom's 6 C4' residue renamed to RG5 Atom's 7 H4' residue renamed to RG5 Atom's 8 O4' residue renamed to RG5 Atom's 9 C1' residue renamed to RG5 Atom's 10 H1' residue renamed to RG5 Atom's 11 N9 residue renamed to RG5 Atom's 12 C4 residue renamed to RG5 Atom's 13 N3 residue renamed to RG5 Atom's 14 C2 residue renamed to RG5 Atom's 15 N2 residue renamed to RG5 Atom's 16 H21 residue renamed to RG5 Atom's 17 H22 residue renamed to RG5 Atom's 18 N1 residue renamed to RG5 Atom's 19 H1 residue renamed to RG5 Atom's 20 C6 residue renamed to RG5 Atom's 21 O6 residue renamed to RG5 Atom's 22 C5 residue renamed to RG5 Atom's 23 N7 residue renamed to RG5 Atom's 24 C8 residue renamed to RG5 Atom's 25 H8 residue renamed to RG5 Atom's 26 C2' residue renamed to RG5 Atom's 27 H2' residue renamed to RG5 Atom's 28 O2' residue renamed to RG5 Atom's 29 HO'2 residue renamed to RG5 Atom's 30 C3' residue renamed to RG5 Atom's 31 H3' residue renamed to RG5 Atom's 32 O3' residue renamed to RG5 Atom's 1739 H3T residue renamed to RC3 Atom's 1738 O3' residue renamed to RC3 Atom's 1737 C3' residue renamed to RC3 Atom's 1736 H3' residue renamed to RC3 Atom's 1735 HO'2 residue renamed to RC3 Atom's 1734 O2' residue renamed to RC3 Atom's 1733 H2' residue renamed to RC3 Atom's 1732 C2' residue renamed to RC3 Atom's 1731 H5 residue renamed to RC3 Atom's 1730 C5 residue renamed to RC3 Atom's 1729 H42 residue renamed to RC3 Atom's 1728 H41 residue renamed to RC3 Atom's 1727 N4 residue renamed to RC3 Atom's 1726 C4 residue renamed to RC3 Atom's 1725 N3 residue renamed to RC3 Atom's 1724 O2 residue renamed to RC3 Atom's 1723 C2 residue renamed to RC3 Atom's 1722 H6 residue renamed to RC3 Atom's 1721 C6 residue renamed to RC3 Atom's 1720 N1 residue renamed to RC3 Atom's 1719 H1' residue renamed to RC3 Atom's 1718 C1' residue renamed to RC3 Atom's 1717 O4' residue renamed to RC3 Atom's 1716 H4' residue renamed to RC3 Atom's 1715 C4' residue renamed to RC3 Atom's 1714 H5'2 residue renamed to RC3 Atom's 1713 H5'1 residue renamed to RC3 Atom's 1712 C5' residue renamed to RC3 Atom's 1711 O5' residue renamed to RC3 Atom's 1710 OP2 residue renamed to RC3 Atom's 1709 OP1 residue renamed to RC3 Atom's 1708 P residue renamed to RC3 Number of atoms: 1739 Number of residues: 54 Building intraresidual bonds... Building intraresidual angles... Building intraresidual dihedrals... Building intraresidual impropers... Building interresidual bonds... Building interresidual angles... Internal Warning: unknown atoms in angle: H5 C2 N* Internal Warning: unknown atoms in angle: H5 C2 NB Internal Warning: unknown atoms in angle: N* C2 NB Internal Warning: unknown atoms in angle: CB N* C2 Internal Warning: unknown atoms in angle: C2 N* CT Internal Warning: unknown atoms in angle: CB NB C2 Internal Warning: unknown atoms in angle: C1 C NA Internal Warning: unknown atoms in angle: C1 C O Internal Warning: unknown atoms in angle: C1 CA N2 Internal Warning: unknown atoms in angle: C1 CA NC Internal Warning: unknown atoms in angle: C C1 C1 Internal Warning: unknown atoms in angle: C C1 CT Internal Warning: unknown atoms in angle: C C1 HA Internal Warning: unknown atoms in angle: C C1 H4 Internal Warning: unknown atoms in angle: CA C1 C1 Internal Warning: unknown atoms in angle: CA C1 HA Internal Warning: unknown atoms in angle: CA C1 H4 Internal Warning: unknown atoms in angle: C1 C1 CT Internal Warning: unknown atoms in angle: C1 C1 HA Internal Warning: unknown atoms in angle: C1 C1 H4 Internal Warning: unknown atoms in angle: C1 C1 N* Internal Warning: unknown atoms in angle: H4 C1 N* Internal Warning: unknown atoms in angle: H1 CT C1 Internal Warning: unknown atoms in angle: HC CT C1 Internal Warning: unknown atoms in angle: C N* C1 Internal Warning: unknown atoms in angle: C1 N* CT Building interresidual dihedrals... Internal Warning: unknown atom(s) in dihedral: X C2 N* X Internal Warning: unknown atom(s) in dihedral: X C2 NB X Internal Warning: unknown atom(s) in dihedral: X C C1 X Internal Warning: unknown atom(s) in dihedral: X CA C1 X Internal Warning: unknown atom(s) in dihedral: X C1 C1 X Internal Warning: unknown atom(s) in dihedral: X C1 CT X Internal Warning: unknown atom(s) in dihedral: X C1 N* X Internal Warning: unknown atom(s) in dihedral: HC CT C1 C1 Internal Warning: unknown atom(s) in dihedral: HC CT C1 C1 Internal Warning: unknown atom(s) in dihedral: C1 C1 C O Internal Warning: unknown atom(s) in dihedral: C1 C1 C O Internal Warning: unknown atom(s) in dihedral: OS CT N* C2 Internal Warning: unknown atom(s) in dihedral: OS CT N* C2 Internal Warning: unknown atom(s) in dihedral: OS CT N* C2 Internal Warning: unknown atom(s) in dihedral: OS CT N* C1 Internal Warning: unknown atom(s) in dihedral: OS CT N* C1 Internal Warning: unknown atom(s) in dihedral: OS CT N* C1 Internal Warning: unknown atom(s) in dihedral: OS CT N* C1 Number of bonds built: 1875 Number of angles built: 3351 Number of dihedrals built: 5104 Number of impropers built: 371 ----------------------------------------------------------------------------- End of molecule (chain) ----------------------------------------------------------------------------- ----------------------------------------------------------------------------- Building interresidual nonbonded pairs & H-bonds (it may take a while)... Number of electrostatic pairs: 1505965 Number of van der Waals pairs: 212951 Number of H-bonds built: 50 Number of spring restraints: 0 Number of positional restraints: 0 Number of base pairs built: 15 Number of molecules (chains) read: 1 ----------------------------------------------------------------------------- Performing minimization step: 1. Total energy = 2533 kcal/mol (2528 without restraints) Performing minimization step: 2. Total energy = 2526 kcal/mol (2521 without restraints) Performing minimization step: 3. Total energy = 2520 kcal/mol (2515 without restraints) Performing minimization step: 4. Total energy = 2513 kcal/mol (2508 without restraints) Performing minimization step: 5. Total energy = 2507 kcal/mol (2502 without restraints) Performing minimization step: 6. Total energy = 2501 kcal/mol (2495 without restraints) Performing minimization step: 7. Total energy = 2494 kcal/mol (2489 without restraints) Performing minimization step: 8. Total energy = 2488 kcal/mol (2483 without restraints) Performing minimization step: 9. Total energy = 2482 kcal/mol (2477 without restraints) Performing minimization step: 10. Total energy = 2476 kcal/mol (2471 without restraints) Performing minimization step: 11. Total energy = 2470 kcal/mol (2465 without restraints) Performing minimization step: 12. Total energy = 2464 kcal/mol (2459 without restraints) Performing minimization step: 13. Total energy = 2458 kcal/mol (2453 without restraints) Performing minimization step: 14. Total energy = 2452 kcal/mol (2447 without restraints) Performing minimization step: 15. Total energy = 2447 kcal/mol (2442 without restraints) Performing minimization step: 16. Total energy = 2441 kcal/mol (2436 without restraints) Performing minimization step: 17. Total energy = 2435 kcal/mol (2430 without restraints) Performing minimization step: 18. Total energy = 2430 kcal/mol (2425 without restraints) Performing minimization step: 19. Total energy = 2424 kcal/mol (2419 without restraints) Performing minimization step: 20. Total energy = 2419 kcal/mol (2414 without restraints) Performing minimization step: 21. Total energy = 2413 kcal/mol (2408 without restraints) Performing minimization step: 22. Total energy = 2408 kcal/mol (2403 without restraints) Performing minimization step: 23. Total energy = 2403 kcal/mol (2398 without restraints) Performing minimization step: 24. Total energy = 2397 kcal/mol (2393 without restraints) Performing minimization step: 25. Total energy = 2392 kcal/mol (2387 without restraints) Performing minimization step: 26. Total energy = 2387 kcal/mol (2382 without restraints) Performing minimization step: 27. Total energy = 2382 kcal/mol (2377 without restraints) Performing minimization step: 28. Total energy = 2377 kcal/mol (2372 without restraints) Performing minimization step: 29. Total energy = 2372 kcal/mol (2367 without restraints) Performing minimization step: 30. Total energy = 2367 kcal/mol (2362 without restraints) Performing minimization step: 31. Total energy = 2362 kcal/mol (2357 without restraints) Performing minimization step: 32. Total energy = 2357 kcal/mol (2352 without restraints) Performing minimization step: 33. Total energy = 2352 kcal/mol (2348 without restraints) Performing minimization step: 34. Total energy = 2348 kcal/mol (2343 without restraints) Performing minimization step: 35. Total energy = 2343 kcal/mol (2338 without restraints) Performing minimization step: 36. Total energy = 2338 kcal/mol (2333 without restraints) Performing minimization step: 37. Total energy = 2333 kcal/mol (2329 without restraints) Performing minimization step: 38. Total energy = 2329 kcal/mol (2324 without restraints) Performing minimization step: 39. Total energy = 2324 kcal/mol (2319 without restraints) Performing minimization step: 40. Total energy = 2320 kcal/mol (2315 without restraints) Performing minimization step: 41. Total energy = 2315 kcal/mol (2310 without restraints) Performing minimization step: 42. Total energy = 2311 kcal/mol (2306 without restraints) Performing minimization step: 43. Total energy = 2306 kcal/mol (2302 without restraints) Performing minimization step: 44. Total energy = 2302 kcal/mol (2297 without restraints) Performing minimization step: 45. Total energy = 2298 kcal/mol (2293 without restraints) Performing minimization step: 46. Total energy = 2293 kcal/mol (2289 without restraints) Performing minimization step: 47. Total energy = 2289 kcal/mol (2284 without restraints) Performing minimization step: 48. Total energy = 2285 kcal/mol (2280 without restraints) Performing minimization step: 49. Total energy = 2281 kcal/mol (2276 without restraints) Performing minimization step: 50. Total energy = 2276 kcal/mol (2272 without restraints) Performing minimization step: 51. Total energy = 2272 kcal/mol (2268 without restraints) Performing minimization step: 52. Total energy = 2268 kcal/mol (2264 without restraints) Performing minimization step: 53. Total energy = 2264 kcal/mol (2259 without restraints) Performing minimization step: 54. Total energy = 2260 kcal/mol (2255 without restraints) Performing minimization step: 55. Total energy = 2256 kcal/mol (2251 without restraints) Performing minimization step: 56. Total energy = 2252 kcal/mol (2247 without restraints) Performing minimization step: 57. Total energy = 2248 kcal/mol (2244 without restraints) Performing minimization step: 58. Total energy = 2244 kcal/mol (2240 without restraints) Performing minimization step: 59. Total energy = 2241 kcal/mol (2236 without restraints) Performing minimization step: 60. Total energy = 2237 kcal/mol (2232 without restraints) Performing minimization step: 61. Total energy = 2233 kcal/mol (2228 without restraints) Performing minimization step: 62. Total energy = 2229 kcal/mol (2224 without restraints) Performing minimization step: 63. Total energy = 2225 kcal/mol (2221 without restraints) Performing minimization step: 64. Total energy = 2222 kcal/mol (2217 without restraints) Performing minimization step: 65. Total energy = 2218 kcal/mol (2213 without restraints) Performing minimization step: 66. Total energy = 2214 kcal/mol (2210 without restraints) Performing minimization step: 67. Total energy = 2211 kcal/mol (2206 without restraints) Performing minimization step: 68. Total energy = 2207 kcal/mol (2202 without restraints) Performing minimization step: 69. Total energy = 2204 kcal/mol (2199 without restraints) Performing minimization step: 70. Total energy = 2200 kcal/mol (2195 without restraints) Performing minimization step: 71. Total energy = 2197 kcal/mol (2192 without restraints) Performing minimization step: 72. Total energy = 2193 kcal/mol (2188 without restraints) Performing minimization step: 73. Total energy = 2190 kcal/mol (2185 without restraints) Performing minimization step: 74. Total energy = 2186 kcal/mol (2182 without restraints) Performing minimization step: 75. Total energy = 2183 kcal/mol (2178 without restraints) Performing minimization step: 76. Total energy = 2179 kcal/mol (2175 without restraints) Performing minimization step: 77. Total energy = 2176 kcal/mol (2171 without restraints) Performing minimization step: 78. Total energy = 2173 kcal/mol (2168 without restraints) Performing minimization step: 79. Total energy = 2169 kcal/mol (2165 without restraints) Performing minimization step: 80. Total energy = 2166 kcal/mol (2162 without restraints) Performing minimization step: 81. Total energy = 2163 kcal/mol (2158 without restraints) Performing minimization step: 82. Total energy = 2160 kcal/mol (2155 without restraints) Performing minimization step: 83. Total energy = 2157 kcal/mol (2152 without restraints) Performing minimization step: 84. Total energy = 2153 kcal/mol (2149 without restraints) Performing minimization step: 85. Total energy = 2150 kcal/mol (2146 without restraints) Performing minimization step: 86. Total energy = 2147 kcal/mol (2143 without restraints) Performing minimization step: 87. Total energy = 2144 kcal/mol (2139 without restraints) Performing minimization step: 88. Total energy = 2141 kcal/mol (2136 without restraints) Performing minimization step: 89. Total energy = 2138 kcal/mol (2133 without restraints) Performing minimization step: 90. Total energy = 2135 kcal/mol (2130 without restraints) Performing minimization step: 91. Total energy = 2132 kcal/mol (2127 without restraints) Performing minimization step: 92. Total energy = 2129 kcal/mol (2124 without restraints) Performing minimization step: 93. Total energy = 2126 kcal/mol (2121 without restraints) Performing minimization step: 94. Total energy = 2123 kcal/mol (2118 without restraints) Performing minimization step: 95. Total energy = 2120 kcal/mol (2115 without restraints) Performing minimization step: 96. Total energy = 2117 kcal/mol (2113 without restraints) Performing minimization step: 97. Total energy = 2114 kcal/mol (2110 without restraints) Performing minimization step: 98. Total energy = 2111 kcal/mol (2107 without restraints) Performing minimization step: 99. Total energy = 2109 kcal/mol (2104 without restraints) Performing minimization step: 100. Total energy = 2106 kcal/mol (2101 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/90a3fe85/tmp/apt_refx/apt_refx.pdb ...Done. Performing minimization step: 101. Total energy = 2103 kcal/mol (2098 without restraints) Performing minimization step: 102. Total energy = 2100 kcal/mol (2096 without restraints) Performing minimization step: 103. Total energy = 2097 kcal/mol (2093 without restraints) Performing minimization step: 104. Total energy = 2095 kcal/mol (2090 without restraints) Performing minimization step: 105. Total energy = 2092 kcal/mol (2087 without restraints) Performing minimization step: 106. Total energy = 2089 kcal/mol (2085 without restraints) Performing minimization step: 107. Total energy = 2086 kcal/mol (2082 without restraints) Performing minimization step: 108. Total energy = 2084 kcal/mol (2079 without restraints) Performing minimization step: 109. Total energy = 2081 kcal/mol (2077 without restraints) Performing minimization step: 110. Total energy = 2079 kcal/mol (2074 without restraints) Performing minimization step: 111. Total energy = 2076 kcal/mol (2071 without restraints) Performing minimization step: 112. Total energy = 2073 kcal/mol (2069 without restraints) Performing minimization step: 113. Total energy = 2071 kcal/mol (2066 without restraints) Performing minimization step: 114. Total energy = 2068 kcal/mol (2064 without restraints) Performing minimization step: 115. Total energy = 2066 kcal/mol (2061 without restraints) Performing minimization step: 116. Total energy = 2063 kcal/mol (2059 without restraints) Performing minimization step: 117. Total energy = 2061 kcal/mol (2056 without restraints) Performing minimization step: 118. Total energy = 2058 kcal/mol (2054 without restraints) Performing minimization step: 119. Total energy = 2056 kcal/mol (2051 without restraints) Performing minimization step: 120. Total energy = 2053 kcal/mol (2049 without restraints) Performing minimization step: 121. Total energy = 2051 kcal/mol (2046 without restraints) Performing minimization step: 122. Total energy = 2048 kcal/mol (2044 without restraints) Performing minimization step: 123. Total energy = 2046 kcal/mol (2041 without restraints) Performing minimization step: 124. Total energy = 2043 kcal/mol (2039 without restraints) Performing minimization step: 125. Total energy = 2041 kcal/mol (2037 without restraints) Performing minimization step: 126. Total energy = 2039 kcal/mol (2034 without restraints) Performing minimization step: 127. Total energy = 2036 kcal/mol (2032 without restraints) Performing minimization step: 128. Total energy = 2034 kcal/mol (2029 without restraints) Performing minimization step: 129. Total energy = 2032 kcal/mol (2027 without restraints) Performing minimization step: 130. Total energy = 2029 kcal/mol (2025 without restraints) Performing minimization step: 131. Total energy = 2027 kcal/mol (2023 without restraints) Performing minimization step: 132. Total energy = 2025 kcal/mol (2020 without restraints) Performing minimization step: 133. Total energy = 2022 kcal/mol (2018 without restraints) Performing minimization step: 134. Total energy = 2020 kcal/mol (2016 without restraints) Performing minimization step: 135. Total energy = 2018 kcal/mol (2013 without restraints) Performing minimization step: 136. Total energy = 2016 kcal/mol (2011 without restraints) Performing minimization step: 137. Total energy = 2013 kcal/mol (2009 without restraints) Performing minimization step: 138. Total energy = 2011 kcal/mol (2007 without restraints) Performing minimization step: 139. Total energy = 2009 kcal/mol (2005 without restraints) Performing minimization step: 140. Total energy = 2007 kcal/mol (2002 without restraints) Performing minimization step: 141. Total energy = 2005 kcal/mol (2000 without restraints) Performing minimization step: 142. Total energy = 2002 kcal/mol (1998 without restraints) Performing minimization step: 143. Total energy = 2000 kcal/mol (1996 without restraints) Performing minimization step: 144. Total energy = 1998 kcal/mol (1994 without restraints) Performing minimization step: 145. Total energy = 1996 kcal/mol (1992 without restraints) Performing minimization step: 146. Total energy = 1994 kcal/mol (1990 without restraints) Performing minimization step: 147. Total energy = 1992 kcal/mol (1987 without restraints) Performing minimization step: 148. Total energy = 1990 kcal/mol (1985 without restraints) Performing minimization step: 149. Total energy = 1988 kcal/mol (1983 without restraints) Performing minimization step: 150. Total energy = 1986 kcal/mol (1981 without restraints) Performing minimization step: 151. Total energy = 1983 kcal/mol (1979 without restraints) Performing minimization step: 152. Total energy = 1981 kcal/mol (1977 without restraints) Performing minimization step: 153. Total energy = 1979 kcal/mol (1975 without restraints) Performing minimization step: 154. Total energy = 1977 kcal/mol (1973 without restraints) Performing minimization step: 155. Total energy = 1975 kcal/mol (1971 without restraints) Performing minimization step: 156. Total energy = 1973 kcal/mol (1969 without restraints) Performing minimization step: 157. Total energy = 1971 kcal/mol (1967 without restraints) Performing minimization step: 158. Total energy = 1969 kcal/mol (1965 without restraints) Performing minimization step: 159. Total energy = 1967 kcal/mol (1963 without restraints) Performing minimization step: 160. Total energy = 1965 kcal/mol (1961 without restraints) Performing minimization step: 161. Total energy = 1963 kcal/mol (1959 without restraints) Performing minimization step: 162. Total energy = 1961 kcal/mol (1957 without restraints) Performing minimization step: 163. Total energy = 1959 kcal/mol (1955 without restraints) Performing minimization step: 164. Total energy = 1957 kcal/mol (1953 without restraints) Performing minimization step: 165. Total energy = 1956 kcal/mol (1951 without restraints) Performing minimization step: 166. Total energy = 1954 kcal/mol (1949 without restraints) Performing minimization step: 167. Total energy = 1952 kcal/mol (1947 without restraints) Performing minimization step: 168. Total energy = 1950 kcal/mol (1946 without restraints) Performing minimization step: 169. Total energy = 1948 kcal/mol (1944 without restraints) Performing minimization step: 170. Total energy = 1946 kcal/mol (1942 without restraints) Performing minimization step: 171. Total energy = 1944 kcal/mol (1940 without restraints) Performing minimization step: 172. Total energy = 1942 kcal/mol (1938 without restraints) Performing minimization step: 173. Total energy = 1940 kcal/mol (1936 without restraints) Performing minimization step: 174. Total energy = 1939 kcal/mol (1934 without restraints) Performing minimization step: 175. Total energy = 1937 kcal/mol (1932 without restraints) Performing minimization step: 176. Total energy = 1935 kcal/mol (1931 without restraints) Performing minimization step: 177. Total energy = 1933 kcal/mol (1929 without restraints) Performing minimization step: 178. Total energy = 1931 kcal/mol (1927 without restraints) Performing minimization step: 179. Total energy = 1929 kcal/mol (1925 without restraints) Performing minimization step: 180. Total energy = 1928 kcal/mol (1923 without restraints) Performing minimization step: 181. Total energy = 1926 kcal/mol (1922 without restraints) Performing minimization step: 182. Total energy = 1924 kcal/mol (1920 without restraints) Performing minimization step: 183. Total energy = 1922 kcal/mol (1918 without restraints) Performing minimization step: 184. Total energy = 1921 kcal/mol (1916 without restraints) Performing minimization step: 185. Total energy = 1919 kcal/mol (1914 without restraints) Performing minimization step: 186. Total energy = 1917 kcal/mol (1913 without restraints) Performing minimization step: 187. Total energy = 1915 kcal/mol (1911 without restraints) Performing minimization step: 188. Total energy = 1913 kcal/mol (1909 without restraints) Performing minimization step: 189. Total energy = 1912 kcal/mol (1907 without restraints) Performing minimization step: 190. Total energy = 1910 kcal/mol (1906 without restraints) Performing minimization step: 191. Total energy = 1908 kcal/mol (1904 without restraints) Performing minimization step: 192. Total energy = 1907 kcal/mol (1902 without restraints) Performing minimization step: 193. Total energy = 1905 kcal/mol (1901 without restraints) Performing minimization step: 194. Total energy = 1903 kcal/mol (1899 without restraints) Performing minimization step: 195. Total energy = 1901 kcal/mol (1897 without restraints) Performing minimization step: 196. Total energy = 1900 kcal/mol (1896 without restraints) Performing minimization step: 197. Total energy = 1898 kcal/mol (1894 without restraints) Performing minimization step: 198. Total energy = 1896 kcal/mol (1892 without restraints) Performing minimization step: 199. Total energy = 1895 kcal/mol (1891 without restraints) Performing minimization step: 200. Total energy = 1893 kcal/mol (1889 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/90a3fe85/tmp/apt_refx/apt_refx.pdb ...Done. Performing minimization step: 201. Total energy = 1891 kcal/mol (1887 without restraints) Performing minimization step: 202. Total energy = 1890 kcal/mol (1886 without restraints) Performing minimization step: 203. Total energy = 1888 kcal/mol (1884 without restraints) Performing minimization step: 204. Total energy = 1887 kcal/mol (1882 without restraints) Performing minimization step: 205. Total energy = 1885 kcal/mol (1881 without restraints) Performing minimization step: 206. Total energy = 1883 kcal/mol (1879 without restraints) Performing minimization step: 207. Total energy = 1882 kcal/mol (1877 without restraints) Performing minimization step: 208. Total energy = 1880 kcal/mol (1876 without restraints) Performing minimization step: 209. Total energy = 1878 kcal/mol (1874 without restraints) Performing minimization step: 210. Total energy = 1877 kcal/mol (1873 without restraints) Performing minimization step: 211. Total energy = 1875 kcal/mol (1871 without restraints) Performing minimization step: 212. Total energy = 1874 kcal/mol (1869 without restraints) Performing minimization step: 213. Total energy = 1872 kcal/mol (1868 without restraints) Performing minimization step: 214. Total energy = 1870 kcal/mol (1866 without restraints) Performing minimization step: 215. Total energy = 1869 kcal/mol (1865 without restraints) Performing minimization step: 216. Total energy = 1867 kcal/mol (1863 without restraints) Performing minimization step: 217. Total energy = 1866 kcal/mol (1862 without restraints) Performing minimization step: 218. Total energy = 1864 kcal/mol (1860 without restraints) Performing minimization step: 219. Total energy = 1863 kcal/mol (1858 without restraints) Performing minimization step: 220. Total energy = 1861 kcal/mol (1857 without restraints) Performing minimization step: 221. Total energy = 1860 kcal/mol (1855 without restraints) Performing minimization step: 222. Total energy = 1858 kcal/mol (1854 without restraints) Performing minimization step: 223. Total energy = 1857 kcal/mol (1852 without restraints) Performing minimization step: 224. Total energy = 1855 kcal/mol (1851 without restraints) Performing minimization step: 225. Total energy = 1853 kcal/mol (1849 without restraints) Performing minimization step: 226. Total energy = 1852 kcal/mol (1848 without restraints) Performing minimization step: 227. Total energy = 1850 kcal/mol (1846 without restraints) Performing minimization step: 228. Total energy = 1849 kcal/mol (1845 without restraints) Performing minimization step: 229. Total energy = 1847 kcal/mol (1843 without restraints) Performing minimization step: 230. Total energy = 1846 kcal/mol (1842 without restraints) Performing minimization step: 231. Total energy = 1844 kcal/mol (1840 without restraints) Performing minimization step: 232. Total energy = 1843 kcal/mol (1839 without restraints) Performing minimization step: 233. Total energy = 1842 kcal/mol (1837 without restraints) Performing minimization step: 234. Total energy = 1840 kcal/mol (1836 without restraints) Performing minimization step: 235. Total energy = 1839 kcal/mol (1834 without restraints) Performing minimization step: 236. Total energy = 1837 kcal/mol (1833 without restraints) Performing minimization step: 237. Total energy = 1836 kcal/mol (1832 without restraints) Performing minimization step: 238. Total energy = 1834 kcal/mol (1830 without restraints) Performing minimization step: 239. Total energy = 1833 kcal/mol (1829 without restraints) Performing minimization step: 240. Total energy = 1831 kcal/mol (1827 without restraints) Performing minimization step: 241. Total energy = 1830 kcal/mol (1826 without restraints) Performing minimization step: 242. Total energy = 1828 kcal/mol (1824 without restraints) Performing minimization step: 243. Total energy = 1827 kcal/mol (1823 without restraints) Performing minimization step: 244. Total energy = 1826 kcal/mol (1821 without restraints) Performing minimization step: 245. Total energy = 1824 kcal/mol (1820 without restraints) Performing minimization step: 246. Total energy = 1823 kcal/mol (1819 without restraints) Performing minimization step: 247. Total energy = 1821 kcal/mol (1817 without restraints) Performing minimization step: 248. Total energy = 1820 kcal/mol (1816 without restraints) Performing minimization step: 249. Total energy = 1819 kcal/mol (1814 without restraints) Performing minimization step: 250. Total energy = 1817 kcal/mol (1813 without restraints) Performing minimization step: 251. Total energy = 1816 kcal/mol (1812 without restraints) Performing minimization step: 252. Total energy = 1814 kcal/mol (1810 without restraints) Performing minimization step: 253. Total energy = 1813 kcal/mol (1809 without restraints) Performing minimization step: 254. Total energy = 1812 kcal/mol (1808 without restraints) Performing minimization step: 255. Total energy = 1810 kcal/mol (1806 without restraints) Performing minimization step: 256. Total energy = 1809 kcal/mol (1805 without restraints) Performing minimization step: 257. Total energy = 1808 kcal/mol (1803 without restraints) Performing minimization step: 258. Total energy = 1806 kcal/mol (1802 without restraints) Performing minimization step: 259. Total energy = 1805 kcal/mol (1801 without restraints) Performing minimization step: 260. Total energy = 1804 kcal/mol (1799 without restraints) Performing minimization step: 261. Total energy = 1802 kcal/mol (1798 without restraints) Performing minimization step: 262. Total energy = 1801 kcal/mol (1797 without restraints) Performing minimization step: 263. Total energy = 1800 kcal/mol (1795 without restraints) Performing minimization step: 264. Total energy = 1798 kcal/mol (1794 without restraints) Performing minimization step: 265. Total energy = 1797 kcal/mol (1793 without restraints) Performing minimization step: 266. Total energy = 1796 kcal/mol (1791 without restraints) Performing minimization step: 267. Total energy = 1794 kcal/mol (1790 without restraints) Performing minimization step: 268. Total energy = 1793 kcal/mol (1789 without restraints) Performing minimization step: 269. Total energy = 1792 kcal/mol (1787 without restraints) Performing minimization step: 270. Total energy = 1790 kcal/mol (1786 without restraints) Performing minimization step: 271. Total energy = 1789 kcal/mol (1785 without restraints) Performing minimization step: 272. Total energy = 1788 kcal/mol (1784 without restraints) Performing minimization step: 273. Total energy = 1786 kcal/mol (1782 without restraints) Performing minimization step: 274. Total energy = 1785 kcal/mol (1781 without restraints) Performing minimization step: 275. Total energy = 1784 kcal/mol (1780 without restraints) Performing minimization step: 276. Total energy = 1783 kcal/mol (1778 without restraints) Performing minimization step: 277. Total energy = 1781 kcal/mol (1777 without restraints) Performing minimization step: 278. Total energy = 1780 kcal/mol (1776 without restraints) Performing minimization step: 279. Total energy = 1779 kcal/mol (1775 without restraints) Performing minimization step: 280. Total energy = 1777 kcal/mol (1773 without restraints) Performing minimization step: 281. Total energy = 1776 kcal/mol (1772 without restraints) Performing minimization step: 282. Total energy = 1775 kcal/mol (1771 without restraints) Performing minimization step: 283. Total energy = 1774 kcal/mol (1770 without restraints) Performing minimization step: 284. Total energy = 1772 kcal/mol (1768 without restraints) Performing minimization step: 285. Total energy = 1771 kcal/mol (1767 without restraints) Performing minimization step: 286. Total energy = 1770 kcal/mol (1766 without restraints) Performing minimization step: 287. Total energy = 1769 kcal/mol (1765 without restraints) Performing minimization step: 288. Total energy = 1767 kcal/mol (1763 without restraints) Performing minimization step: 289. Total energy = 1766 kcal/mol (1762 without restraints) Performing minimization step: 290. Total energy = 1765 kcal/mol (1761 without restraints) Performing minimization step: 291. Total energy = 1764 kcal/mol (1760 without restraints) Performing minimization step: 292. Total energy = 1763 kcal/mol (1759 without restraints) Performing minimization step: 293. Total energy = 1761 kcal/mol (1757 without restraints) Performing minimization step: 294. Total energy = 1760 kcal/mol (1756 without restraints) Performing minimization step: 295. Total energy = 1759 kcal/mol (1755 without restraints) Performing minimization step: 296. Total energy = 1758 kcal/mol (1754 without restraints) Performing minimization step: 297. Total energy = 1757 kcal/mol (1753 without restraints) Performing minimization step: 298. Total energy = 1755 kcal/mol (1751 without restraints) Performing minimization step: 299. Total energy = 1754 kcal/mol (1750 without restraints) Performing minimization step: 300. Total energy = 1753 kcal/mol (1749 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/90a3fe85/tmp/apt_refx/apt_refx.pdb ...Done. Performing minimization step: 301. Total energy = 1752 kcal/mol (1748 without restraints) Performing minimization step: 302. Total energy = 1751 kcal/mol (1747 without restraints) Performing minimization step: 303. Total energy = 1749 kcal/mol (1745 without restraints) Performing minimization step: 304. Total energy = 1748 kcal/mol (1744 without restraints) Performing minimization step: 305. Total energy = 1747 kcal/mol (1743 without restraints) Performing minimization step: 306. Total energy = 1746 kcal/mol (1742 without restraints) Performing minimization step: 307. Total energy = 1745 kcal/mol (1741 without restraints) Performing minimization step: 308. Total energy = 1744 kcal/mol (1740 without restraints) Performing minimization step: 309. Total energy = 1742 kcal/mol (1738 without restraints) Performing minimization step: 310. Total energy = 1741 kcal/mol (1737 without restraints) Performing minimization step: 311. Total energy = 1740 kcal/mol (1736 without restraints) Performing minimization step: 312. Total energy = 1739 kcal/mol (1735 without restraints) Performing minimization step: 313. Total energy = 1738 kcal/mol (1734 without restraints) Performing minimization step: 314. Total energy = 1737 kcal/mol (1733 without restraints) Performing minimization step: 315. Total energy = 1736 kcal/mol (1732 without restraints) Performing minimization step: 316. Total energy = 1734 kcal/mol (1730 without restraints) Performing minimization step: 317. Total energy = 1733 kcal/mol (1729 without restraints) Performing minimization step: 318. Total energy = 1732 kcal/mol (1728 without restraints) Performing minimization step: 319. Total energy = 1731 kcal/mol (1727 without restraints) Performing minimization step: 320. Total energy = 1730 kcal/mol (1726 without restraints) Performing minimization step: 321. Total energy = 1729 kcal/mol (1725 without restraints) Performing minimization step: 322. Total energy = 1728 kcal/mol (1724 without restraints) Performing minimization step: 323. Total energy = 1727 kcal/mol (1723 without restraints) Performing minimization step: 324. Total energy = 1725 kcal/mol (1721 without restraints) Performing minimization step: 325. Total energy = 1724 kcal/mol (1720 without restraints) Performing minimization step: 326. Total energy = 1723 kcal/mol (1719 without restraints) Performing minimization step: 327. Total energy = 1722 kcal/mol (1718 without restraints) Performing minimization step: 328. Total energy = 1721 kcal/mol (1717 without restraints) Performing minimization step: 329. Total energy = 1720 kcal/mol (1716 without restraints) Performing minimization step: 330. Total energy = 1719 kcal/mol (1715 without restraints) Performing minimization step: 331. Total energy = 1718 kcal/mol (1714 without restraints) Performing minimization step: 332. Total energy = 1717 kcal/mol (1713 without restraints) Performing minimization step: 333. Total energy = 1716 kcal/mol (1712 without restraints) Performing minimization step: 334. Total energy = 1715 kcal/mol (1711 without restraints) Performing minimization step: 335. Total energy = 1714 kcal/mol (1710 without restraints) Performing minimization step: 336. Total energy = 1712 kcal/mol (1709 without restraints) Performing minimization step: 337. Total energy = 1711 kcal/mol (1707 without restraints) Performing minimization step: 338. Total energy = 1710 kcal/mol (1706 without restraints) Performing minimization step: 339. Total energy = 1709 kcal/mol (1705 without restraints) Performing minimization step: 340. Total energy = 1708 kcal/mol (1704 without restraints) Performing minimization step: 341. Total energy = 1707 kcal/mol (1703 without restraints) Performing minimization step: 342. Total energy = 1706 kcal/mol (1702 without restraints) Performing minimization step: 343. Total energy = 1705 kcal/mol (1701 without restraints) Performing minimization step: 344. Total energy = 1704 kcal/mol (1700 without restraints) Performing minimization step: 345. Total energy = 1703 kcal/mol (1699 without restraints) Performing minimization step: 346. Total energy = 1702 kcal/mol (1698 without restraints) Performing minimization step: 347. Total energy = 1701 kcal/mol (1697 without restraints) Performing minimization step: 348. Total energy = 1700 kcal/mol (1696 without restraints) Performing minimization step: 349. Total energy = 1699 kcal/mol (1695 without restraints) Performing minimization step: 350. Total energy = 1698 kcal/mol (1694 without restraints) Performing minimization step: 351. Total energy = 1697 kcal/mol (1693 without restraints) Performing minimization step: 352. Total energy = 1696 kcal/mol (1692 without restraints) Performing minimization step: 353. Total energy = 1695 kcal/mol (1691 without restraints) Performing minimization step: 354. Total energy = 1694 kcal/mol (1690 without restraints) Performing minimization step: 355. Total energy = 1693 kcal/mol (1689 without restraints) Performing minimization step: 356. Total energy = 1692 kcal/mol (1688 without restraints) Performing minimization step: 357. Total energy = 1691 kcal/mol (1687 without restraints) Performing minimization step: 358. Total energy = 1690 kcal/mol (1686 without restraints) Performing minimization step: 359. Total energy = 1689 kcal/mol (1685 without restraints) Performing minimization step: 360. Total energy = 1688 kcal/mol (1684 without restraints) Performing minimization step: 361. Total energy = 1687 kcal/mol (1683 without restraints) Performing minimization step: 362. Total energy = 1686 kcal/mol (1682 without restraints) Performing minimization step: 363. Total energy = 1685 kcal/mol (1681 without restraints) Performing minimization step: 364. Total energy = 1684 kcal/mol (1680 without restraints) Performing minimization step: 365. Total energy = 1683 kcal/mol (1679 without restraints) Performing minimization step: 366. Total energy = 1682 kcal/mol (1678 without restraints) Performing minimization step: 367. Total energy = 1681 kcal/mol (1677 without restraints) Performing minimization step: 368. Total energy = 1680 kcal/mol (1676 without restraints) Performing minimization step: 369. Total energy = 1679 kcal/mol (1675 without restraints) Performing minimization step: 370. Total energy = 1678 kcal/mol (1674 without restraints) Performing minimization step: 371. Total energy = 1677 kcal/mol (1673 without restraints) Performing minimization step: 372. Total energy = 1676 kcal/mol (1672 without restraints) Performing minimization step: 373. Total energy = 1675 kcal/mol (1671 without restraints) Performing minimization step: 374. Total energy = 1674 kcal/mol (1670 without restraints) Performing minimization step: 375. Total energy = 1673 kcal/mol (1669 without restraints) Performing minimization step: 376. Total energy = 1672 kcal/mol (1668 without restraints) Performing minimization step: 377. Total energy = 1671 kcal/mol (1667 without restraints) Performing minimization step: 378. Total energy = 1670 kcal/mol (1666 without restraints) Performing minimization step: 379. Total energy = 1669 kcal/mol (1666 without restraints) Performing minimization step: 380. Total energy = 1668 kcal/mol (1665 without restraints) Performing minimization step: 381. Total energy = 1667 kcal/mol (1664 without restraints) Performing minimization step: 382. Total energy = 1667 kcal/mol (1663 without restraints) Performing minimization step: 383. Total energy = 1666 kcal/mol (1662 without restraints) Performing minimization step: 384. Total energy = 1665 kcal/mol (1661 without restraints) Performing minimization step: 385. Total energy = 1664 kcal/mol (1660 without restraints) Performing minimization step: 386. Total energy = 1663 kcal/mol (1659 without restraints) Performing minimization step: 387. Total energy = 1662 kcal/mol (1658 without restraints) Performing minimization step: 388. Total energy = 1661 kcal/mol (1657 without restraints) Performing minimization step: 389. Total energy = 1660 kcal/mol (1656 without restraints) Performing minimization step: 390. Total energy = 1659 kcal/mol (1655 without restraints) Performing minimization step: 391. Total energy = 1658 kcal/mol (1654 without restraints) Performing minimization step: 392. Total energy = 1657 kcal/mol (1654 without restraints) Performing minimization step: 393. Total energy = 1656 kcal/mol (1653 without restraints) Performing minimization step: 394. Total energy = 1656 kcal/mol (1652 without restraints) Performing minimization step: 395. Total energy = 1655 kcal/mol (1651 without restraints) Performing minimization step: 396. Total energy = 1654 kcal/mol (1650 without restraints) Performing minimization step: 397. Total energy = 1653 kcal/mol (1649 without restraints) Performing minimization step: 398. Total energy = 1652 kcal/mol (1648 without restraints) Performing minimization step: 399. Total energy = 1651 kcal/mol (1647 without restraints) Performing minimization step: 400. Total energy = 1650 kcal/mol (1646 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/90a3fe85/tmp/apt_refx/apt_refx.pdb ...Done. Performing minimization step: 401. Total energy = 1649 kcal/mol (1646 without restraints) Performing minimization step: 402. Total energy = 1648 kcal/mol (1645 without restraints) Performing minimization step: 403. Total energy = 1648 kcal/mol (1644 without restraints) Performing minimization step: 404. Total energy = 1647 kcal/mol (1643 without restraints) Performing minimization step: 405. Total energy = 1646 kcal/mol (1642 without restraints) Performing minimization step: 406. Total energy = 1645 kcal/mol (1641 without restraints) Performing minimization step: 407. Total energy = 1644 kcal/mol (1640 without restraints) Performing minimization step: 408. Total energy = 1643 kcal/mol (1639 without restraints) Performing minimization step: 409. Total energy = 1642 kcal/mol (1639 without restraints) Performing minimization step: 410. Total energy = 1641 kcal/mol (1638 without restraints) Performing minimization step: 411. Total energy = 1641 kcal/mol (1637 without restraints) Performing minimization step: 412. Total energy = 1640 kcal/mol (1636 without restraints) Performing minimization step: 413. Total energy = 1639 kcal/mol (1635 without restraints) Performing minimization step: 414. Total energy = 1638 kcal/mol (1634 without restraints) Performing minimization step: 415. Total energy = 1637 kcal/mol (1633 without restraints) Performing minimization step: 416. Total energy = 1636 kcal/mol (1633 without restraints) Performing minimization step: 417. Total energy = 1635 kcal/mol (1632 without restraints) Performing minimization step: 418. Total energy = 1635 kcal/mol (1631 without restraints) Performing minimization step: 419. Total energy = 1634 kcal/mol (1630 without restraints) Performing minimization step: 420. Total energy = 1633 kcal/mol (1629 without restraints) Performing minimization step: 421. Total energy = 1632 kcal/mol (1628 without restraints) Performing minimization step: 422. Total energy = 1631 kcal/mol (1628 without restraints) Performing minimization step: 423. Total energy = 1630 kcal/mol (1627 without restraints) Performing minimization step: 424. Total energy = 1630 kcal/mol (1626 without restraints) Performing minimization step: 425. Total energy = 1629 kcal/mol (1625 without restraints) Performing minimization step: 426. Total energy = 1628 kcal/mol (1624 without restraints) Performing minimization step: 427. Total energy = 1627 kcal/mol (1623 without restraints) Performing minimization step: 428. Total energy = 1626 kcal/mol (1623 without restraints) Performing minimization step: 429. Total energy = 1626 kcal/mol (1622 without restraints) Performing minimization step: 430. Total energy = 1625 kcal/mol (1621 without restraints) Performing minimization step: 431. Total energy = 1624 kcal/mol (1620 without restraints) Performing minimization step: 432. Total energy = 1623 kcal/mol (1619 without restraints) Performing minimization step: 433. Total energy = 1622 kcal/mol (1619 without restraints) Performing minimization step: 434. Total energy = 1621 kcal/mol (1618 without restraints) Performing minimization step: 435. Total energy = 1621 kcal/mol (1617 without restraints) Performing minimization step: 436. Total energy = 1620 kcal/mol (1616 without restraints) Performing minimization step: 437. Total energy = 1619 kcal/mol (1615 without restraints) Performing minimization step: 438. Total energy = 1618 kcal/mol (1615 without restraints) Performing minimization step: 439. Total energy = 1617 kcal/mol (1614 without restraints) Performing minimization step: 440. Total energy = 1617 kcal/mol (1613 without restraints) Performing minimization step: 441. Total energy = 1616 kcal/mol (1612 without restraints) Performing minimization step: 442. Total energy = 1615 kcal/mol (1611 without restraints) Performing minimization step: 443. Total energy = 1614 kcal/mol (1611 without restraints) Performing minimization step: 444. Total energy = 1614 kcal/mol (1610 without restraints) Performing minimization step: 445. Total energy = 1613 kcal/mol (1609 without restraints) Performing minimization step: 446. Total energy = 1612 kcal/mol (1608 without restraints) Performing minimization step: 447. Total energy = 1611 kcal/mol (1608 without restraints) Performing minimization step: 448. Total energy = 1610 kcal/mol (1607 without restraints) Performing minimization step: 449. Total energy = 1610 kcal/mol (1606 without restraints) Performing minimization step: 450. Total energy = 1609 kcal/mol (1605 without restraints) Performing minimization step: 451. Total energy = 1608 kcal/mol (1604 without restraints) Performing minimization step: 452. Total energy = 1607 kcal/mol (1604 without restraints) Performing minimization step: 453. Total energy = 1607 kcal/mol (1603 without restraints) Performing minimization step: 454. Total energy = 1606 kcal/mol (1602 without restraints) Performing minimization step: 455. Total energy = 1605 kcal/mol (1601 without restraints) Performing minimization step: 456. Total energy = 1604 kcal/mol (1601 without restraints) Performing minimization step: 457. Total energy = 1604 kcal/mol (1600 without restraints) Performing minimization step: 458. Total energy = 1603 kcal/mol (1599 without restraints) Performing minimization step: 459. Total energy = 1602 kcal/mol (1598 without restraints) Performing minimization step: 460. Total energy = 1601 kcal/mol (1598 without restraints) Performing minimization step: 461. Total energy = 1600 kcal/mol (1597 without restraints) Performing minimization step: 462. Total energy = 1600 kcal/mol (1596 without restraints) Performing minimization step: 463. Total energy = 1599 kcal/mol (1595 without restraints) Performing minimization step: 464. Total energy = 1598 kcal/mol (1595 without restraints) Performing minimization step: 465. Total energy = 1598 kcal/mol (1594 without restraints) Performing minimization step: 466. Total energy = 1597 kcal/mol (1593 without restraints) Performing minimization step: 467. Total energy = 1596 kcal/mol (1592 without restraints) Performing minimization step: 468. Total energy = 1595 kcal/mol (1592 without restraints) Performing minimization step: 469. Total energy = 1595 kcal/mol (1591 without restraints) Performing minimization step: 470. Total energy = 1594 kcal/mol (1590 without restraints) Performing minimization step: 471. Total energy = 1593 kcal/mol (1589 without restraints) Performing minimization step: 472. Total energy = 1592 kcal/mol (1589 without restraints) Performing minimization step: 473. Total energy = 1592 kcal/mol (1588 without restraints) Performing minimization step: 474. Total energy = 1591 kcal/mol (1587 without restraints) Performing minimization step: 475. Total energy = 1590 kcal/mol (1587 without restraints) Performing minimization step: 476. Total energy = 1589 kcal/mol (1586 without restraints) Performing minimization step: 477. Total energy = 1589 kcal/mol (1585 without restraints) Performing minimization step: 478. Total energy = 1588 kcal/mol (1584 without restraints) Performing minimization step: 479. Total energy = 1587 kcal/mol (1584 without restraints) Performing minimization step: 480. Total energy = 1587 kcal/mol (1583 without restraints) Performing minimization step: 481. Total energy = 1586 kcal/mol (1582 without restraints) Performing minimization step: 482. Total energy = 1585 kcal/mol (1582 without restraints) Performing minimization step: 483. Total energy = 1585 kcal/mol (1581 without restraints) Performing minimization step: 484. Total energy = 1584 kcal/mol (1580 without restraints) Performing minimization step: 485. Total energy = 1583 kcal/mol (1580 without restraints) Performing minimization step: 486. Total energy = 1582 kcal/mol (1579 without restraints) Performing minimization step: 487. Total energy = 1582 kcal/mol (1578 without restraints) Performing minimization step: 488. Total energy = 1581 kcal/mol (1577 without restraints) Performing minimization step: 489. Total energy = 1580 kcal/mol (1577 without restraints) Performing minimization step: 490. Total energy = 1580 kcal/mol (1576 without restraints) Performing minimization step: 491. Total energy = 1579 kcal/mol (1575 without restraints) Performing minimization step: 492. Total energy = 1578 kcal/mol (1575 without restraints) Performing minimization step: 493. Total energy = 1578 kcal/mol (1574 without restraints) Performing minimization step: 494. Total energy = 1577 kcal/mol (1573 without restraints) Performing minimization step: 495. Total energy = 1576 kcal/mol (1573 without restraints) Performing minimization step: 496. Total energy = 1575 kcal/mol (1572 without restraints) Performing minimization step: 497. Total energy = 1575 kcal/mol (1571 without restraints) Performing minimization step: 498. Total energy = 1574 kcal/mol (1571 without restraints) Performing minimization step: 499. Total energy = 1573 kcal/mol (1570 without restraints) Performing minimization step: 500. Total energy = 1573 kcal/mol (1569 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/90a3fe85/tmp/apt_refx/apt_refx.pdb ...Done. Performing minimization step: 501. Total energy = 1572 kcal/mol (1569 without restraints) Performing minimization step: 502. Total energy = 1571 kcal/mol (1568 without restraints) Performing minimization step: 503. Total energy = 1571 kcal/mol (1567 without restraints) Performing minimization step: 504. Total energy = 1570 kcal/mol (1567 without restraints) Performing minimization step: 505. Total energy = 1569 kcal/mol (1566 without restraints) Performing minimization step: 506. Total energy = 1569 kcal/mol (1565 without restraints) Performing minimization step: 507. Total energy = 1568 kcal/mol (1565 without restraints) Performing minimization step: 508. Total energy = 1567 kcal/mol (1564 without restraints) Performing minimization step: 509. Total energy = 1567 kcal/mol (1563 without restraints) Performing minimization step: 510. Total energy = 1566 kcal/mol (1563 without restraints) Performing minimization step: 511. Total energy = 1565 kcal/mol (1562 without restraints) Performing minimization step: 512. Total energy = 1565 kcal/mol (1561 without restraints) Performing minimization step: 513. Total energy = 1564 kcal/mol (1561 without restraints) Performing minimization step: 514. Total energy = 1564 kcal/mol (1560 without restraints) Performing minimization step: 515. Total energy = 1563 kcal/mol (1559 without restraints) Performing minimization step: 516. Total energy = 1562 kcal/mol (1559 without restraints) Performing minimization step: 517. Total energy = 1562 kcal/mol (1558 without restraints) Performing minimization step: 518. Total energy = 1561 kcal/mol (1557 without restraints) Performing minimization step: 519. Total energy = 1560 kcal/mol (1557 without restraints) Performing minimization step: 520. Total energy = 1560 kcal/mol (1556 without restraints) Performing minimization step: 521. Total energy = 1559 kcal/mol (1556 without restraints) Performing minimization step: 522. Total energy = 1558 kcal/mol (1555 without restraints) Performing minimization step: 523. Total energy = 1558 kcal/mol (1554 without restraints) Performing minimization step: 524. Total energy = 1557 kcal/mol (1554 without restraints) Performing minimization step: 525. Total energy = 1556 kcal/mol (1553 without restraints) Performing minimization step: 526. Total energy = 1556 kcal/mol (1552 without restraints) Performing minimization step: 527. Total energy = 1555 kcal/mol (1552 without restraints) Performing minimization step: 528. Total energy = 1555 kcal/mol (1551 without restraints) Performing minimization step: 529. Total energy = 1554 kcal/mol (1550 without restraints) Performing minimization step: 530. Total energy = 1553 kcal/mol (1550 without restraints) Performing minimization step: 531. Total energy = 1553 kcal/mol (1549 without restraints) Performing minimization step: 532. Total energy = 1552 kcal/mol (1549 without restraints) Performing minimization step: 533. Total energy = 1551 kcal/mol (1548 without restraints) Performing minimization step: 534. Total energy = 1551 kcal/mol (1547 without restraints) Performing minimization step: 535. Total energy = 1550 kcal/mol (1547 without restraints) Performing minimization step: 536. Total energy = 1550 kcal/mol (1546 without restraints) Performing minimization step: 537. Total energy = 1549 kcal/mol (1546 without restraints) Performing minimization step: 538. Total energy = 1548 kcal/mol (1545 without restraints) Performing minimization step: 539. Total energy = 1548 kcal/mol (1544 without restraints) Performing minimization step: 540. Total energy = 1547 kcal/mol (1544 without restraints) Performing minimization step: 541. Total energy = 1547 kcal/mol (1543 without restraints) Performing minimization step: 542. Total energy = 1546 kcal/mol (1543 without restraints) Performing minimization step: 543. Total energy = 1545 kcal/mol (1542 without restraints) Performing minimization step: 544. Total energy = 1545 kcal/mol (1541 without restraints) Performing minimization step: 545. Total energy = 1544 kcal/mol (1541 without restraints) Performing minimization step: 546. Total energy = 1544 kcal/mol (1540 without restraints) Performing minimization step: 547. Total energy = 1543 kcal/mol (1540 without restraints) Performing minimization step: 548. Total energy = 1542 kcal/mol (1539 without restraints) Performing minimization step: 549. Total energy = 1542 kcal/mol (1538 without restraints) Performing minimization step: 550. Total energy = 1541 kcal/mol (1538 without restraints) Performing minimization step: 551. Total energy = 1541 kcal/mol (1537 without restraints) Performing minimization step: 552. Total energy = 1540 kcal/mol (1537 without restraints) Performing minimization step: 553. Total energy = 1539 kcal/mol (1536 without restraints) Performing minimization step: 554. Total energy = 1539 kcal/mol (1535 without restraints) Performing minimization step: 555. Total energy = 1538 kcal/mol (1535 without restraints) Performing minimization step: 556. Total energy = 1538 kcal/mol (1534 without restraints) Performing minimization step: 557. Total energy = 1537 kcal/mol (1534 without restraints) Performing minimization step: 558. Total energy = 1536 kcal/mol (1533 without restraints) Performing minimization step: 559. Total energy = 1536 kcal/mol (1532 without restraints) Performing minimization step: 560. Total energy = 1535 kcal/mol (1532 without restraints) Performing minimization step: 561. Total energy = 1535 kcal/mol (1531 without restraints) Performing minimization step: 562. Total energy = 1534 kcal/mol (1531 without restraints) Performing minimization step: 563. Total energy = 1534 kcal/mol (1530 without restraints) Performing minimization step: 564. Total energy = 1533 kcal/mol (1530 without restraints) Performing minimization step: 565. Total energy = 1532 kcal/mol (1529 without restraints) Performing minimization step: 566. Total energy = 1532 kcal/mol (1528 without restraints) Performing minimization step: 567. Total energy = 1531 kcal/mol (1528 without restraints) Performing minimization step: 568. Total energy = 1531 kcal/mol (1527 without restraints) Performing minimization step: 569. Total energy = 1530 kcal/mol (1527 without restraints) Performing minimization step: 570. Total energy = 1530 kcal/mol (1526 without restraints) Performing minimization step: 571. Total energy = 1529 kcal/mol (1526 without restraints) Performing minimization step: 572. Total energy = 1528 kcal/mol (1525 without restraints) Performing minimization step: 573. Total energy = 1528 kcal/mol (1525 without restraints) Performing minimization step: 574. Total energy = 1527 kcal/mol (1524 without restraints) Performing minimization step: 575. Total energy = 1527 kcal/mol (1523 without restraints) Performing minimization step: 576. Total energy = 1526 kcal/mol (1523 without restraints) Performing minimization step: 577. Total energy = 1526 kcal/mol (1522 without restraints) Performing minimization step: 578. Total energy = 1525 kcal/mol (1522 without restraints) Performing minimization step: 579. Total energy = 1525 kcal/mol (1521 without restraints) Performing minimization step: 580. Total energy = 1524 kcal/mol (1521 without restraints) Performing minimization step: 581. Total energy = 1523 kcal/mol (1520 without restraints) Performing minimization step: 582. Total energy = 1523 kcal/mol (1520 without restraints) Performing minimization step: 583. Total energy = 1522 kcal/mol (1519 without restraints) Performing minimization step: 584. Total energy = 1522 kcal/mol (1518 without restraints) Performing minimization step: 585. Total energy = 1521 kcal/mol (1518 without restraints) Performing minimization step: 586. Total energy = 1521 kcal/mol (1517 without restraints) Performing minimization step: 587. Total energy = 1520 kcal/mol (1517 without restraints) Performing minimization step: 588. Total energy = 1520 kcal/mol (1516 without restraints) Performing minimization step: 589. Total energy = 1519 kcal/mol (1516 without restraints) Performing minimization step: 590. Total energy = 1519 kcal/mol (1515 without restraints) Performing minimization step: 591. Total energy = 1518 kcal/mol (1515 without restraints) Performing minimization step: 592. Total energy = 1517 kcal/mol (1514 without restraints) Performing minimization step: 593. Total energy = 1517 kcal/mol (1514 without restraints) Performing minimization step: 594. Total energy = 1516 kcal/mol (1513 without restraints) Performing minimization step: 595. Total energy = 1516 kcal/mol (1513 without restraints) Performing minimization step: 596. Total energy = 1515 kcal/mol (1512 without restraints) Performing minimization step: 597. Total energy = 1515 kcal/mol (1512 without restraints) Performing minimization step: 598. Total energy = 1514 kcal/mol (1511 without restraints) Performing minimization step: 599. Total energy = 1514 kcal/mol (1510 without restraints) Performing minimization step: 600. Total energy = 1513 kcal/mol (1510 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/90a3fe85/tmp/apt_refx/apt_refx.pdb ...Done. Performing minimization step: 601. Total energy = 1513 kcal/mol (1509 without restraints) Performing minimization step: 602. Total energy = 1512 kcal/mol (1509 without restraints) Performing minimization step: 603. Total energy = 1512 kcal/mol (1508 without restraints) Performing minimization step: 604. Total energy = 1511 kcal/mol (1508 without restraints) Performing minimization step: 605. Total energy = 1511 kcal/mol (1507 without restraints) Performing minimization step: 606. Total energy = 1510 kcal/mol (1507 without restraints) Performing minimization step: 607. Total energy = 1510 kcal/mol (1506 without restraints) Performing minimization step: 608. Total energy = 1509 kcal/mol (1506 without restraints) Performing minimization step: 609. Total energy = 1509 kcal/mol (1505 without restraints) Performing minimization step: 610. Total energy = 1508 kcal/mol (1505 without restraints) Performing minimization step: 611. Total energy = 1508 kcal/mol (1504 without restraints) Performing minimization step: 612. Total energy = 1507 kcal/mol (1504 without restraints) Performing minimization step: 613. Total energy = 1507 kcal/mol (1503 without restraints) Performing minimization step: 614. Total energy = 1506 kcal/mol (1503 without restraints) Performing minimization step: 615. Total energy = 1506 kcal/mol (1502 without restraints) Performing minimization step: 616. Total energy = 1505 kcal/mol (1502 without restraints) Performing minimization step: 617. Total energy = 1504 kcal/mol (1501 without restraints) Performing minimization step: 618. Total energy = 1504 kcal/mol (1501 without restraints) Performing minimization step: 619. Total energy = 1503 kcal/mol (1500 without restraints) Performing minimization step: 620. Total energy = 1503 kcal/mol (1500 without restraints) Performing minimization step: 621. Total energy = 1502 kcal/mol (1499 without restraints) Performing minimization step: 622. Total energy = 1502 kcal/mol (1499 without restraints) Performing minimization step: 623. Total energy = 1501 kcal/mol (1498 without restraints) Performing minimization step: 624. Total energy = 1501 kcal/mol (1498 without restraints) Performing minimization step: 625. Total energy = 1500 kcal/mol (1497 without restraints) Performing minimization step: 626. Total energy = 1500 kcal/mol (1497 without restraints) Performing minimization step: 627. Total energy = 1500 kcal/mol (1496 without restraints) Performing minimization step: 628. Total energy = 1499 kcal/mol (1496 without restraints) Performing minimization step: 629. Total energy = 1499 kcal/mol (1495 without restraints) Performing minimization step: 630. Total energy = 1498 kcal/mol (1495 without restraints) Performing minimization step: 631. Total energy = 1498 kcal/mol (1494 without restraints) Performing minimization step: 632. Total energy = 1497 kcal/mol (1494 without restraints) Performing minimization step: 633. Total energy = 1497 kcal/mol (1493 without restraints) Performing minimization step: 634. Total energy = 1496 kcal/mol (1493 without restraints) Performing minimization step: 635. Total energy = 1496 kcal/mol (1492 without restraints) Performing minimization step: 636. Total energy = 1495 kcal/mol (1492 without restraints) Performing minimization step: 637. Total energy = 1495 kcal/mol (1491 without restraints) Performing minimization step: 638. Total energy = 1494 kcal/mol (1491 without restraints) Performing minimization step: 639. Total energy = 1494 kcal/mol (1490 without restraints) Performing minimization step: 640. Total energy = 1493 kcal/mol (1490 without restraints) Performing minimization step: 641. Total energy = 1493 kcal/mol (1490 without restraints) Performing minimization step: 642. Total energy = 1492 kcal/mol (1489 without restraints) Performing minimization step: 643. Total energy = 1492 kcal/mol (1489 without restraints) Performing minimization step: 644. Total energy = 1491 kcal/mol (1488 without restraints) Performing minimization step: 645. Total energy = 1491 kcal/mol (1488 without restraints) Performing minimization step: 646. Total energy = 1490 kcal/mol (1487 without restraints) Performing minimization step: 647. Total energy = 1490 kcal/mol (1487 without restraints) Performing minimization step: 648. Total energy = 1489 kcal/mol (1486 without restraints) Performing minimization step: 649. Total energy = 1489 kcal/mol (1486 without restraints) Performing minimization step: 650. Total energy = 1488 kcal/mol (1485 without restraints) Performing minimization step: 651. Total energy = 1488 kcal/mol (1485 without restraints) Performing minimization step: 652. Total energy = 1488 kcal/mol (1484 without restraints) Performing minimization step: 653. Total energy = 1487 kcal/mol (1484 without restraints) Performing minimization step: 654. Total energy = 1487 kcal/mol (1483 without restraints) Performing minimization step: 655. Total energy = 1486 kcal/mol (1483 without restraints) Performing minimization step: 656. Total energy = 1486 kcal/mol (1483 without restraints) Performing minimization step: 657. Total energy = 1485 kcal/mol (1482 without restraints) Performing minimization step: 658. Total energy = 1485 kcal/mol (1482 without restraints) Performing minimization step: 659. Total energy = 1484 kcal/mol (1481 without restraints) Performing minimization step: 660. Total energy = 1484 kcal/mol (1481 without restraints) Performing minimization step: 661. Total energy = 1483 kcal/mol (1480 without restraints) Performing minimization step: 662. Total energy = 1483 kcal/mol (1480 without restraints) Performing minimization step: 663. Total energy = 1482 kcal/mol (1479 without restraints) Performing minimization step: 664. Total energy = 1482 kcal/mol (1479 without restraints) Performing minimization step: 665. Total energy = 1482 kcal/mol (1478 without restraints) Performing minimization step: 666. Total energy = 1481 kcal/mol (1478 without restraints) Performing minimization step: 667. Total energy = 1481 kcal/mol (1478 without restraints) Performing minimization step: 668. Total energy = 1480 kcal/mol (1477 without restraints) Performing minimization step: 669. Total energy = 1480 kcal/mol (1477 without restraints) Performing minimization step: 670. Total energy = 1479 kcal/mol (1476 without restraints) Performing minimization step: 671. Total energy = 1479 kcal/mol (1476 without restraints) Performing minimization step: 672. Total energy = 1478 kcal/mol (1475 without restraints) Performing minimization step: 673. Total energy = 1478 kcal/mol (1475 without restraints) Performing minimization step: 674. Total energy = 1478 kcal/mol (1474 without restraints) Performing minimization step: 675. Total energy = 1477 kcal/mol (1474 without restraints) Performing minimization step: 676. Total energy = 1477 kcal/mol (1474 without restraints) Performing minimization step: 677. Total energy = 1476 kcal/mol (1473 without restraints) Performing minimization step: 678. Total energy = 1476 kcal/mol (1473 without restraints) Performing minimization step: 679. Total energy = 1475 kcal/mol (1472 without restraints) Performing minimization step: 680. Total energy = 1475 kcal/mol (1472 without restraints) Performing minimization step: 681. Total energy = 1474 kcal/mol (1471 without restraints) Performing minimization step: 682. Total energy = 1474 kcal/mol (1471 without restraints) Performing minimization step: 683. Total energy = 1474 kcal/mol (1470 without restraints) Performing minimization step: 684. Total energy = 1473 kcal/mol (1470 without restraints) Performing minimization step: 685. Total energy = 1473 kcal/mol (1470 without restraints) Performing minimization step: 686. Total energy = 1472 kcal/mol (1469 without restraints) Performing minimization step: 687. Total energy = 1472 kcal/mol (1469 without restraints) Performing minimization step: 688. Total energy = 1471 kcal/mol (1468 without restraints) Performing minimization step: 689. Total energy = 1471 kcal/mol (1468 without restraints) Performing minimization step: 690. Total energy = 1471 kcal/mol (1467 without restraints) Performing minimization step: 691. Total energy = 1470 kcal/mol (1467 without restraints) Performing minimization step: 692. Total energy = 1470 kcal/mol (1467 without restraints) Performing minimization step: 693. Total energy = 1469 kcal/mol (1466 without restraints) Performing minimization step: 694. Total energy = 1469 kcal/mol (1466 without restraints) Performing minimization step: 695. Total energy = 1468 kcal/mol (1465 without restraints) Performing minimization step: 696. Total energy = 1468 kcal/mol (1465 without restraints) Performing minimization step: 697. Total energy = 1468 kcal/mol (1465 without restraints) Performing minimization step: 698. Total energy = 1467 kcal/mol (1464 without restraints) Performing minimization step: 699. Total energy = 1467 kcal/mol (1464 without restraints) Performing minimization step: 700. Total energy = 1466 kcal/mol (1463 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/90a3fe85/tmp/apt_refx/apt_refx.pdb ...Done. Performing minimization step: 701. Total energy = 1466 kcal/mol (1463 without restraints) Performing minimization step: 702. Total energy = 1465 kcal/mol (1462 without restraints) Performing minimization step: 703. Total energy = 1465 kcal/mol (1462 without restraints) Performing minimization step: 704. Total energy = 1465 kcal/mol (1462 without restraints) Performing minimization step: 705. Total energy = 1464 kcal/mol (1461 without restraints) Performing minimization step: 706. Total energy = 1464 kcal/mol (1461 without restraints) Performing minimization step: 707. Total energy = 1463 kcal/mol (1460 without restraints) Performing minimization step: 708. Total energy = 1463 kcal/mol (1460 without restraints) Performing minimization step: 709. Total energy = 1463 kcal/mol (1460 without restraints) Performing minimization step: 710. Total energy = 1462 kcal/mol (1459 without restraints) Performing minimization step: 711. Total energy = 1462 kcal/mol (1459 without restraints) Performing minimization step: 712. Total energy = 1461 kcal/mol (1458 without restraints) Performing minimization step: 713. Total energy = 1461 kcal/mol (1458 without restraints) Performing minimization step: 714. Total energy = 1461 kcal/mol (1457 without restraints) Performing minimization step: 715. Total energy = 1460 kcal/mol (1457 without restraints) Performing minimization step: 716. Total energy = 1460 kcal/mol (1457 without restraints) Performing minimization step: 717. Total energy = 1459 kcal/mol (1456 without restraints) Performing minimization step: 718. Total energy = 1459 kcal/mol (1456 without restraints) Performing minimization step: 719. Total energy = 1458 kcal/mol (1455 without restraints) Performing minimization step: 720. Total energy = 1458 kcal/mol (1455 without restraints) Performing minimization step: 721. Total energy = 1458 kcal/mol (1455 without restraints) Performing minimization step: 722. Total energy = 1457 kcal/mol (1454 without restraints) Performing minimization step: 723. Total energy = 1457 kcal/mol (1454 without restraints) Performing minimization step: 724. Total energy = 1456 kcal/mol (1453 without restraints) Performing minimization step: 725. Total energy = 1456 kcal/mol (1453 without restraints) Performing minimization step: 726. Total energy = 1456 kcal/mol (1453 without restraints) Performing minimization step: 727. Total energy = 1455 kcal/mol (1452 without restraints) Performing minimization step: 728. Total energy = 1455 kcal/mol (1452 without restraints) Performing minimization step: 729. Total energy = 1455 kcal/mol (1452 without restraints) Performing minimization step: 730. Total energy = 1454 kcal/mol (1451 without restraints) Performing minimization step: 731. Total energy = 1454 kcal/mol (1451 without restraints) Performing minimization step: 732. Total energy = 1453 kcal/mol (1450 without restraints) Performing minimization step: 733. Total energy = 1453 kcal/mol (1450 without restraints) Performing minimization step: 734. Total energy = 1453 kcal/mol (1450 without restraints) Performing minimization step: 735. Total energy = 1452 kcal/mol (1449 without restraints) Performing minimization step: 736. Total energy = 1452 kcal/mol (1449 without restraints) Performing minimization step: 737. Total energy = 1451 kcal/mol (1448 without restraints) Performing minimization step: 738. Total energy = 1451 kcal/mol (1448 without restraints) Performing minimization step: 739. Total energy = 1451 kcal/mol (1448 without restraints) Performing minimization step: 740. Total energy = 1450 kcal/mol (1447 without restraints) Performing minimization step: 741. Total energy = 1450 kcal/mol (1447 without restraints) Performing minimization step: 742. Total energy = 1449 kcal/mol (1446 without restraints) Performing minimization step: 743. Total energy = 1449 kcal/mol (1446 without restraints) Performing minimization step: 744. Total energy = 1449 kcal/mol (1446 without restraints) Performing minimization step: 745. Total energy = 1448 kcal/mol (1445 without restraints) Performing minimization step: 746. Total energy = 1448 kcal/mol (1445 without restraints) Performing minimization step: 747. Total energy = 1448 kcal/mol (1445 without restraints) Performing minimization step: 748. Total energy = 1447 kcal/mol (1444 without restraints) Performing minimization step: 749. Total energy = 1447 kcal/mol (1444 without restraints) Performing minimization step: 750. Total energy = 1446 kcal/mol (1443 without restraints) Performing minimization step: 751. Total energy = 1446 kcal/mol (1443 without restraints) Performing minimization step: 752. Total energy = 1446 kcal/mol (1443 without restraints) Performing minimization step: 753. Total energy = 1445 kcal/mol (1442 without restraints) Performing minimization step: 754. Total energy = 1445 kcal/mol (1442 without restraints) Performing minimization step: 755. Total energy = 1445 kcal/mol (1442 without restraints) Performing minimization step: 756. Total energy = 1444 kcal/mol (1441 without restraints) Performing minimization step: 757. Total energy = 1444 kcal/mol (1441 without restraints) Performing minimization step: 758. Total energy = 1443 kcal/mol (1440 without restraints) Performing minimization step: 759. Total energy = 1443 kcal/mol (1440 without restraints) Performing minimization step: 760. Total energy = 1443 kcal/mol (1440 without restraints) Performing minimization step: 761. Total energy = 1442 kcal/mol (1439 without restraints) Performing minimization step: 762. Total energy = 1442 kcal/mol (1439 without restraints) Performing minimization step: 763. Total energy = 1442 kcal/mol (1439 without restraints) Performing minimization step: 764. Total energy = 1441 kcal/mol (1438 without restraints) Performing minimization step: 765. Total energy = 1441 kcal/mol (1438 without restraints) Performing minimization step: 766. Total energy = 1440 kcal/mol (1438 without restraints) Performing minimization step: 767. Total energy = 1440 kcal/mol (1437 without restraints) Performing minimization step: 768. Total energy = 1440 kcal/mol (1437 without restraints) Performing minimization step: 769. Total energy = 1439 kcal/mol (1436 without restraints) Performing minimization step: 770. Total energy = 1439 kcal/mol (1436 without restraints) Performing minimization step: 771. Total energy = 1439 kcal/mol (1436 without restraints) Performing minimization step: 772. Total energy = 1438 kcal/mol (1435 without restraints) Performing minimization step: 773. Total energy = 1438 kcal/mol (1435 without restraints) Performing minimization step: 774. Total energy = 1438 kcal/mol (1435 without restraints) Performing minimization step: 775. Total energy = 1437 kcal/mol (1434 without restraints) Performing minimization step: 776. Total energy = 1437 kcal/mol (1434 without restraints) Performing minimization step: 777. Total energy = 1436 kcal/mol (1434 without restraints) Performing minimization step: 778. Total energy = 1436 kcal/mol (1433 without restraints) Performing minimization step: 779. Total energy = 1436 kcal/mol (1433 without restraints) Performing minimization step: 780. Total energy = 1435 kcal/mol (1432 without restraints) Performing minimization step: 781. Total energy = 1435 kcal/mol (1432 without restraints) Performing minimization step: 782. Total energy = 1435 kcal/mol (1432 without restraints) Performing minimization step: 783. Total energy = 1434 kcal/mol (1431 without restraints) Performing minimization step: 784. Total energy = 1434 kcal/mol (1431 without restraints) Performing minimization step: 785. Total energy = 1434 kcal/mol (1431 without restraints) Performing minimization step: 786. Total energy = 1433 kcal/mol (1430 without restraints) Performing minimization step: 787. Total energy = 1433 kcal/mol (1430 without restraints) Performing minimization step: 788. Total energy = 1433 kcal/mol (1430 without restraints) Performing minimization step: 789. Total energy = 1432 kcal/mol (1429 without restraints) Performing minimization step: 790. Total energy = 1432 kcal/mol (1429 without restraints) Performing minimization step: 791. Total energy = 1431 kcal/mol (1429 without restraints) Performing minimization step: 792. Total energy = 1431 kcal/mol (1428 without restraints) Performing minimization step: 793. Total energy = 1431 kcal/mol (1428 without restraints) Performing minimization step: 794. Total energy = 1430 kcal/mol (1428 without restraints) Performing minimization step: 795. Total energy = 1430 kcal/mol (1427 without restraints) Performing minimization step: 796. Total energy = 1430 kcal/mol (1427 without restraints) Performing minimization step: 797. Total energy = 1429 kcal/mol (1427 without restraints) Performing minimization step: 798. Total energy = 1429 kcal/mol (1426 without restraints) Performing minimization step: 799. Total energy = 1429 kcal/mol (1426 without restraints) Performing minimization step: 800. Total energy = 1428 kcal/mol (1426 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/90a3fe85/tmp/apt_refx/apt_refx.pdb ...Done. Performing minimization step: 801. Total energy = 1428 kcal/mol (1425 without restraints) Performing minimization step: 802. Total energy = 1428 kcal/mol (1425 without restraints) Performing minimization step: 803. Total energy = 1427 kcal/mol (1425 without restraints) Performing minimization step: 804. Total energy = 1427 kcal/mol (1424 without restraints) Performing minimization step: 805. Total energy = 1427 kcal/mol (1424 without restraints) Performing minimization step: 806. Total energy = 1426 kcal/mol (1424 without restraints) Performing minimization step: 807. Total energy = 1426 kcal/mol (1423 without restraints) Performing minimization step: 808. Total energy = 1426 kcal/mol (1423 without restraints) Performing minimization step: 809. Total energy = 1425 kcal/mol (1423 without restraints) Performing minimization step: 810. Total energy = 1425 kcal/mol (1422 without restraints) Performing minimization step: 811. Total energy = 1425 kcal/mol (1422 without restraints) Performing minimization step: 812. Total energy = 1424 kcal/mol (1422 without restraints) Performing minimization step: 813. Total energy = 1424 kcal/mol (1421 without restraints) Performing minimization step: 814. Total energy = 1424 kcal/mol (1421 without restraints) Performing minimization step: 815. Total energy = 1423 kcal/mol (1421 without restraints) Performing minimization step: 816. Total energy = 1423 kcal/mol (1420 without restraints) Performing minimization step: 817. Total energy = 1423 kcal/mol (1420 without restraints) Performing minimization step: 818. Total energy = 1422 kcal/mol (1420 without restraints) Performing minimization step: 819. Total energy = 1422 kcal/mol (1419 without restraints) Performing minimization step: 820. Total energy = 1422 kcal/mol (1419 without restraints) Performing minimization step: 821. Total energy = 1421 kcal/mol (1419 without restraints) Performing minimization step: 822. Total energy = 1421 kcal/mol (1418 without restraints) Performing minimization step: 823. Total energy = 1421 kcal/mol (1418 without restraints) Performing minimization step: 824. Total energy = 1420 kcal/mol (1418 without restraints) Performing minimization step: 825. Total energy = 1420 kcal/mol (1417 without restraints) Performing minimization step: 826. Total energy = 1420 kcal/mol (1417 without restraints) Performing minimization step: 827. Total energy = 1419 kcal/mol (1417 without restraints) Performing minimization step: 828. Total energy = 1419 kcal/mol (1416 without restraints) Performing minimization step: 829. Total energy = 1419 kcal/mol (1416 without restraints) Performing minimization step: 830. Total energy = 1418 kcal/mol (1416 without restraints) Performing minimization step: 831. Total energy = 1418 kcal/mol (1415 without restraints) Performing minimization step: 832. Total energy = 1418 kcal/mol (1415 without restraints) Performing minimization step: 833. Total energy = 1417 kcal/mol (1415 without restraints) Performing minimization step: 834. Total energy = 1417 kcal/mol (1414 without restraints) Performing minimization step: 835. Total energy = 1417 kcal/mol (1414 without restraints) Performing minimization step: 836. Total energy = 1416 kcal/mol (1414 without restraints) Performing minimization step: 837. Total energy = 1416 kcal/mol (1413 without restraints) Performing minimization step: 838. Total energy = 1416 kcal/mol (1413 without restraints) Performing minimization step: 839. Total energy = 1415 kcal/mol (1413 without restraints) Performing minimization step: 840. Total energy = 1415 kcal/mol (1412 without restraints) Performing minimization step: 841. Total energy = 1415 kcal/mol (1412 without restraints) Performing minimization step: 842. Total energy = 1415 kcal/mol (1412 without restraints) Performing minimization step: 843. Total energy = 1414 kcal/mol (1411 without restraints) Performing minimization step: 844. Total energy = 1414 kcal/mol (1411 without restraints) Performing minimization step: 845. Total energy = 1414 kcal/mol (1411 without restraints) Performing minimization step: 846. Total energy = 1413 kcal/mol (1411 without restraints) Performing minimization step: 847. Total energy = 1413 kcal/mol (1410 without restraints) Performing minimization step: 848. Total energy = 1413 kcal/mol (1410 without restraints) Performing minimization step: 849. Total energy = 1412 kcal/mol (1410 without restraints) Performing minimization step: 850. Total energy = 1412 kcal/mol (1409 without restraints) Performing minimization step: 851. Total energy = 1412 kcal/mol (1409 without restraints) Performing minimization step: 852. Total energy = 1411 kcal/mol (1409 without restraints) Performing minimization step: 853. Total energy = 1411 kcal/mol (1408 without restraints) Performing minimization step: 854. Total energy = 1411 kcal/mol (1408 without restraints) Performing minimization step: 855. Total energy = 1410 kcal/mol (1408 without restraints) Performing minimization step: 856. Total energy = 1410 kcal/mol (1407 without restraints) Performing minimization step: 857. Total energy = 1410 kcal/mol (1407 without restraints) Performing minimization step: 858. Total energy = 1410 kcal/mol (1407 without restraints) Performing minimization step: 859. Total energy = 1409 kcal/mol (1407 without restraints) Performing minimization step: 860. Total energy = 1409 kcal/mol (1406 without restraints) Performing minimization step: 861. Total energy = 1409 kcal/mol (1406 without restraints) Performing minimization step: 862. Total energy = 1408 kcal/mol (1406 without restraints) Performing minimization step: 863. Total energy = 1408 kcal/mol (1405 without restraints) Performing minimization step: 864. Total energy = 1408 kcal/mol (1405 without restraints) Performing minimization step: 865. Total energy = 1407 kcal/mol (1405 without restraints) Performing minimization step: 866. Total energy = 1407 kcal/mol (1404 without restraints) Performing minimization step: 867. Total energy = 1407 kcal/mol (1404 without restraints) Performing minimization step: 868. Total energy = 1406 kcal/mol (1404 without restraints) Performing minimization step: 869. Total energy = 1406 kcal/mol (1403 without restraints) Performing minimization step: 870. Total energy = 1406 kcal/mol (1403 without restraints) Performing minimization step: 871. Total energy = 1406 kcal/mol (1403 without restraints) Performing minimization step: 872. Total energy = 1405 kcal/mol (1403 without restraints) Performing minimization step: 873. Total energy = 1405 kcal/mol (1402 without restraints) Performing minimization step: 874. Total energy = 1405 kcal/mol (1402 without restraints) Performing minimization step: 875. Total energy = 1404 kcal/mol (1402 without restraints) Performing minimization step: 876. Total energy = 1404 kcal/mol (1401 without restraints) Performing minimization step: 877. Total energy = 1404 kcal/mol (1401 without restraints) Performing minimization step: 878. Total energy = 1403 kcal/mol (1401 without restraints) Performing minimization step: 879. Total energy = 1403 kcal/mol (1400 without restraints) Performing minimization step: 880. Total energy = 1403 kcal/mol (1400 without restraints) Performing minimization step: 881. Total energy = 1403 kcal/mol (1400 without restraints) Performing minimization step: 882. Total energy = 1402 kcal/mol (1400 without restraints) Performing minimization step: 883. Total energy = 1402 kcal/mol (1399 without restraints) Performing minimization step: 884. Total energy = 1402 kcal/mol (1399 without restraints) Performing minimization step: 885. Total energy = 1401 kcal/mol (1399 without restraints) Performing minimization step: 886. Total energy = 1401 kcal/mol (1398 without restraints) Performing minimization step: 887. Total energy = 1401 kcal/mol (1398 without restraints) Performing minimization step: 888. Total energy = 1401 kcal/mol (1398 without restraints) Performing minimization step: 889. Total energy = 1400 kcal/mol (1398 without restraints) Performing minimization step: 890. Total energy = 1400 kcal/mol (1397 without restraints) Performing minimization step: 891. Total energy = 1400 kcal/mol (1397 without restraints) Performing minimization step: 892. Total energy = 1399 kcal/mol (1397 without restraints) Performing minimization step: 893. Total energy = 1399 kcal/mol (1396 without restraints) Performing minimization step: 894. Total energy = 1399 kcal/mol (1396 without restraints) Performing minimization step: 895. Total energy = 1398 kcal/mol (1396 without restraints) Performing minimization step: 896. Total energy = 1398 kcal/mol (1396 without restraints) Performing minimization step: 897. Total energy = 1398 kcal/mol (1395 without restraints) Performing minimization step: 898. Total energy = 1398 kcal/mol (1395 without restraints) Performing minimization step: 899. Total energy = 1397 kcal/mol (1395 without restraints) Performing minimization step: 900. Total energy = 1397 kcal/mol (1394 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/90a3fe85/tmp/apt_refx/apt_refx.pdb ...Done. Performing minimization step: 901. Total energy = 1397 kcal/mol (1394 without restraints) Performing minimization step: 902. Total energy = 1396 kcal/mol (1394 without restraints) Performing minimization step: 903. Total energy = 1396 kcal/mol (1394 without restraints) Performing minimization step: 904. Total energy = 1396 kcal/mol (1393 without restraints) Performing minimization step: 905. Total energy = 1396 kcal/mol (1393 without restraints) Performing minimization step: 906. Total energy = 1395 kcal/mol (1393 without restraints) Performing minimization step: 907. Total energy = 1395 kcal/mol (1392 without restraints) Performing minimization step: 908. Total energy = 1395 kcal/mol (1392 without restraints) Performing minimization step: 909. Total energy = 1394 kcal/mol (1392 without restraints) Performing minimization step: 910. Total energy = 1394 kcal/mol (1392 without restraints) Performing minimization step: 911. Total energy = 1394 kcal/mol (1391 without restraints) Performing minimization step: 912. Total energy = 1394 kcal/mol (1391 without restraints) Performing minimization step: 913. Total energy = 1393 kcal/mol (1391 without restraints) Performing minimization step: 914. Total energy = 1393 kcal/mol (1390 without restraints) Performing minimization step: 915. Total energy = 1393 kcal/mol (1390 without restraints) Performing minimization step: 916. Total energy = 1393 kcal/mol (1390 without restraints) Performing minimization step: 917. Total energy = 1392 kcal/mol (1390 without restraints) Performing minimization step: 918. Total energy = 1392 kcal/mol (1389 without restraints) Performing minimization step: 919. Total energy = 1392 kcal/mol (1389 without restraints) Performing minimization step: 920. Total energy = 1391 kcal/mol (1389 without restraints) Performing minimization step: 921. Total energy = 1391 kcal/mol (1389 without restraints) Performing minimization step: 922. Total energy = 1391 kcal/mol (1388 without restraints) Performing minimization step: 923. Total energy = 1391 kcal/mol (1388 without restraints) Performing minimization step: 924. Total energy = 1390 kcal/mol (1388 without restraints) Performing minimization step: 925. Total energy = 1390 kcal/mol (1387 without restraints) Performing minimization step: 926. Total energy = 1390 kcal/mol (1387 without restraints) Performing minimization step: 927. Total energy = 1389 kcal/mol (1387 without restraints) Performing minimization step: 928. Total energy = 1389 kcal/mol (1387 without restraints) Performing minimization step: 929. Total energy = 1389 kcal/mol (1386 without restraints) Performing minimization step: 930. Total energy = 1389 kcal/mol (1386 without restraints) Performing minimization step: 931. Total energy = 1388 kcal/mol (1386 without restraints) Performing minimization step: 932. Total energy = 1388 kcal/mol (1386 without restraints) Performing minimization step: 933. Total energy = 1388 kcal/mol (1385 without restraints) Performing minimization step: 934. Total energy = 1388 kcal/mol (1385 without restraints) Performing minimization step: 935. Total energy = 1387 kcal/mol (1385 without restraints) Performing minimization step: 936. Total energy = 1387 kcal/mol (1384 without restraints) Performing minimization step: 937. Total energy = 1387 kcal/mol (1384 without restraints) Performing minimization step: 938. Total energy = 1387 kcal/mol (1384 without restraints) Performing minimization step: 939. Total energy = 1386 kcal/mol (1384 without restraints) Performing minimization step: 940. Total energy = 1386 kcal/mol (1383 without restraints) Performing minimization step: 941. Total energy = 1386 kcal/mol (1383 without restraints) Performing minimization step: 942. Total energy = 1385 kcal/mol (1383 without restraints) Performing minimization step: 943. Total energy = 1385 kcal/mol (1383 without restraints) Performing minimization step: 944. Total energy = 1385 kcal/mol (1382 without restraints) Performing minimization step: 945. Total energy = 1385 kcal/mol (1382 without restraints) Performing minimization step: 946. Total energy = 1384 kcal/mol (1382 without restraints) Performing minimization step: 947. Total energy = 1384 kcal/mol (1382 without restraints) Performing minimization step: 948. Total energy = 1384 kcal/mol (1381 without restraints) Performing minimization step: 949. Total energy = 1384 kcal/mol (1381 without restraints) Performing minimization step: 950. Total energy = 1383 kcal/mol (1381 without restraints) Performing minimization step: 951. Total energy = 1383 kcal/mol (1381 without restraints) Performing minimization step: 952. Total energy = 1383 kcal/mol (1380 without restraints) Performing minimization step: 953. Total energy = 1383 kcal/mol (1380 without restraints) Performing minimization step: 954. Total energy = 1382 kcal/mol (1380 without restraints) Performing minimization step: 955. Total energy = 1382 kcal/mol (1379 without restraints) Performing minimization step: 956. Total energy = 1382 kcal/mol (1379 without restraints) Performing minimization step: 957. Total energy = 1381 kcal/mol (1379 without restraints) Performing minimization step: 958. Total energy = 1381 kcal/mol (1379 without restraints) Performing minimization step: 959. Total energy = 1381 kcal/mol (1378 without restraints) Performing minimization step: 960. Total energy = 1381 kcal/mol (1378 without restraints) Performing minimization step: 961. Total energy = 1380 kcal/mol (1378 without restraints) Performing minimization step: 962. Total energy = 1380 kcal/mol (1378 without restraints) Performing minimization step: 963. Total energy = 1380 kcal/mol (1377 without restraints) Performing minimization step: 964. Total energy = 1380 kcal/mol (1377 without restraints) Performing minimization step: 965. Total energy = 1379 kcal/mol (1377 without restraints) Performing minimization step: 966. Total energy = 1379 kcal/mol (1377 without restraints) Performing minimization step: 967. Total energy = 1379 kcal/mol (1376 without restraints) Performing minimization step: 968. Total energy = 1379 kcal/mol (1376 without restraints) Performing minimization step: 969. Total energy = 1378 kcal/mol (1376 without restraints) Performing minimization step: 970. Total energy = 1378 kcal/mol (1376 without restraints) Performing minimization step: 971. Total energy = 1378 kcal/mol (1375 without restraints) Performing minimization step: 972. Total energy = 1378 kcal/mol (1375 without restraints) Performing minimization step: 973. Total energy = 1377 kcal/mol (1375 without restraints) Performing minimization step: 974. Total energy = 1377 kcal/mol (1375 without restraints) Performing minimization step: 975. Total energy = 1377 kcal/mol (1374 without restraints) Performing minimization step: 976. Total energy = 1377 kcal/mol (1374 without restraints) Performing minimization step: 977. Total energy = 1376 kcal/mol (1374 without restraints) Performing minimization step: 978. Total energy = 1376 kcal/mol (1374 without restraints) Performing minimization step: 979. Total energy = 1376 kcal/mol (1373 without restraints) Performing minimization step: 980. Total energy = 1376 kcal/mol (1373 without restraints) Performing minimization step: 981. Total energy = 1375 kcal/mol (1373 without restraints) Performing minimization step: 982. Total energy = 1375 kcal/mol (1373 without restraints) Performing minimization step: 983. Total energy = 1375 kcal/mol (1372 without restraints) Performing minimization step: 984. Total energy = 1375 kcal/mol (1372 without restraints) Performing minimization step: 985. Total energy = 1374 kcal/mol (1372 without restraints) Performing minimization step: 986. Total energy = 1374 kcal/mol (1372 without restraints) Performing minimization step: 987. Total energy = 1374 kcal/mol (1371 without restraints) Performing minimization step: 988. Total energy = 1374 kcal/mol (1371 without restraints) Performing minimization step: 989. Total energy = 1373 kcal/mol (1371 without restraints) Performing minimization step: 990. Total energy = 1373 kcal/mol (1371 without restraints) Performing minimization step: 991. Total energy = 1373 kcal/mol (1370 without restraints) Performing minimization step: 992. Total energy = 1373 kcal/mol (1370 without restraints) Performing minimization step: 993. Total energy = 1372 kcal/mol (1370 without restraints) Performing minimization step: 994. Total energy = 1372 kcal/mol (1370 without restraints) Performing minimization step: 995. Total energy = 1372 kcal/mol (1369 without restraints) Performing minimization step: 996. Total energy = 1372 kcal/mol (1369 without restraints) Performing minimization step: 997. Total energy = 1371 kcal/mol (1369 without restraints) Performing minimization step: 998. Total energy = 1371 kcal/mol (1369 without restraints) Performing minimization step: 999. Total energy = 1371 kcal/mol (1368 without restraints) Performing minimization step: 1000. Total energy = 1371 kcal/mol (1368 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/90a3fe85/tmp/apt_refx/apt_refx.pdb ...Done. Performing minimization step: 1001. Total energy = 1370 kcal/mol (1368 without restraints) Performing minimization step: 1002. Total energy = 1370 kcal/mol (1368 without restraints) Performing minimization step: 1003. Total energy = 1370 kcal/mol (1367 without restraints) Performing minimization step: 1004. Total energy = 1370 kcal/mol (1367 without restraints) Performing minimization step: 1005. Total energy = 1369 kcal/mol (1367 without restraints) Performing minimization step: 1006. Total energy = 1369 kcal/mol (1367 without restraints) Performing minimization step: 1007. Total energy = 1369 kcal/mol (1367 without restraints) Performing minimization step: 1008. Total energy = 1369 kcal/mol (1366 without restraints) Performing minimization step: 1009. Total energy = 1368 kcal/mol (1366 without restraints) Performing minimization step: 1010. Total energy = 1368 kcal/mol (1366 without restraints) Performing minimization step: 1011. Total energy = 1368 kcal/mol (1366 without restraints) Performing minimization step: 1012. Total energy = 1368 kcal/mol (1365 without restraints) Performing minimization step: 1013. Total energy = 1368 kcal/mol (1365 without restraints) Performing minimization step: 1014. Total energy = 1367 kcal/mol (1365 without restraints) Performing minimization step: 1015. Total energy = 1367 kcal/mol (1365 without restraints) Performing minimization step: 1016. Total energy = 1367 kcal/mol (1364 without restraints) Performing minimization step: 1017. Total energy = 1367 kcal/mol (1364 without restraints) Performing minimization step: 1018. Total energy = 1366 kcal/mol (1364 without restraints) Performing minimization step: 1019. Total energy = 1366 kcal/mol (1364 without restraints) Performing minimization step: 1020. Total energy = 1366 kcal/mol (1363 without restraints) Performing minimization step: 1021. Total energy = 1366 kcal/mol (1363 without restraints) Performing minimization step: 1022. Total energy = 1365 kcal/mol (1363 without restraints) Performing minimization step: 1023. Total energy = 1365 kcal/mol (1363 without restraints) Performing minimization step: 1024. Total energy = 1365 kcal/mol (1362 without restraints) Performing minimization step: 1025. Total energy = 1365 kcal/mol (1362 without restraints) Performing minimization step: 1026. Total energy = 1364 kcal/mol (1362 without restraints) Performing minimization step: 1027. Total energy = 1364 kcal/mol (1362 without restraints) Performing minimization step: 1028. Total energy = 1364 kcal/mol (1362 without restraints) Performing minimization step: 1029. Total energy = 1364 kcal/mol (1361 without restraints) Performing minimization step: 1030. Total energy = 1363 kcal/mol (1361 without restraints) Performing minimization step: 1031. Total energy = 1363 kcal/mol (1361 without restraints) Performing minimization step: 1032. Total energy = 1363 kcal/mol (1361 without restraints) Performing minimization step: 1033. Total energy = 1363 kcal/mol (1360 without restraints) Performing minimization step: 1034. Total energy = 1363 kcal/mol (1360 without restraints) Performing minimization step: 1035. Total energy = 1362 kcal/mol (1360 without restraints) Performing minimization step: 1036. Total energy = 1362 kcal/mol (1360 without restraints) Performing minimization step: 1037. Total energy = 1362 kcal/mol (1359 without restraints) Performing minimization step: 1038. Total energy = 1362 kcal/mol (1359 without restraints) Performing minimization step: 1039. Total energy = 1361 kcal/mol (1359 without restraints) Performing minimization step: 1040. Total energy = 1361 kcal/mol (1359 without restraints) Performing minimization step: 1041. Total energy = 1361 kcal/mol (1359 without restraints) Performing minimization step: 1042. Total energy = 1361 kcal/mol (1358 without restraints) Performing minimization step: 1043. Total energy = 1360 kcal/mol (1358 without restraints) Performing minimization step: 1044. Total energy = 1360 kcal/mol (1358 without restraints) Performing minimization step: 1045. Total energy = 1360 kcal/mol (1358 without restraints) Performing minimization step: 1046. Total energy = 1360 kcal/mol (1357 without restraints) Performing minimization step: 1047. Total energy = 1360 kcal/mol (1357 without restraints) Performing minimization step: 1048. Total energy = 1359 kcal/mol (1357 without restraints) Performing minimization step: 1049. Total energy = 1359 kcal/mol (1357 without restraints) Performing minimization step: 1050. Total energy = 1359 kcal/mol (1357 without restraints) Performing minimization step: 1051. Total energy = 1359 kcal/mol (1356 without restraints) Performing minimization step: 1052. Total energy = 1358 kcal/mol (1356 without restraints) Performing minimization step: 1053. Total energy = 1358 kcal/mol (1356 without restraints) Performing minimization step: 1054. Total energy = 1358 kcal/mol (1356 without restraints) Performing minimization step: 1055. Total energy = 1358 kcal/mol (1355 without restraints) Performing minimization step: 1056. Total energy = 1358 kcal/mol (1355 without restraints) Performing minimization step: 1057. Total energy = 1357 kcal/mol (1355 without restraints) Performing minimization step: 1058. Total energy = 1357 kcal/mol (1355 without restraints) Performing minimization step: 1059. Total energy = 1357 kcal/mol (1354 without restraints) Performing minimization step: 1060. Total energy = 1357 kcal/mol (1354 without restraints) Performing minimization step: 1061. Total energy = 1356 kcal/mol (1354 without restraints) Performing minimization step: 1062. Total energy = 1356 kcal/mol (1354 without restraints) Performing minimization step: 1063. Total energy = 1356 kcal/mol (1354 without restraints) Performing minimization step: 1064. Total energy = 1356 kcal/mol (1353 without restraints) Performing minimization step: 1065. Total energy = 1356 kcal/mol (1353 without restraints) Performing minimization step: 1066. Total energy = 1355 kcal/mol (1353 without restraints) Performing minimization step: 1067. Total energy = 1355 kcal/mol (1353 without restraints) Performing minimization step: 1068. Total energy = 1355 kcal/mol (1353 without restraints) Performing minimization step: 1069. Total energy = 1355 kcal/mol (1352 without restraints) Performing minimization step: 1070. Total energy = 1354 kcal/mol (1352 without restraints) Performing minimization step: 1071. Total energy = 1354 kcal/mol (1352 without restraints) Performing minimization step: 1072. Total energy = 1354 kcal/mol (1352 without restraints) Performing minimization step: 1073. Total energy = 1354 kcal/mol (1351 without restraints) Performing minimization step: 1074. Total energy = 1354 kcal/mol (1351 without restraints) Performing minimization step: 1075. Total energy = 1353 kcal/mol (1351 without restraints) Performing minimization step: 1076. Total energy = 1353 kcal/mol (1351 without restraints) Performing minimization step: 1077. Total energy = 1353 kcal/mol (1351 without restraints) Performing minimization step: 1078. Total energy = 1353 kcal/mol (1350 without restraints) Performing minimization step: 1079. Total energy = 1352 kcal/mol (1350 without restraints) Performing minimization step: 1080. Total energy = 1352 kcal/mol (1350 without restraints) Performing minimization step: 1081. Total energy = 1352 kcal/mol (1350 without restraints) Performing minimization step: 1082. Total energy = 1352 kcal/mol (1349 without restraints) Performing minimization step: 1083. Total energy = 1352 kcal/mol (1349 without restraints) Performing minimization step: 1084. Total energy = 1351 kcal/mol (1349 without restraints) Performing minimization step: 1085. Total energy = 1351 kcal/mol (1349 without restraints) Performing minimization step: 1086. Total energy = 1351 kcal/mol (1349 without restraints) Performing minimization step: 1087. Total energy = 1351 kcal/mol (1348 without restraints) Performing minimization step: 1088. Total energy = 1350 kcal/mol (1348 without restraints) Performing minimization step: 1089. Total energy = 1350 kcal/mol (1348 without restraints) Performing minimization step: 1090. Total energy = 1350 kcal/mol (1348 without restraints) Performing minimization step: 1091. Total energy = 1350 kcal/mol (1348 without restraints) Performing minimization step: 1092. Total energy = 1350 kcal/mol (1347 without restraints) Performing minimization step: 1093. Total energy = 1349 kcal/mol (1347 without restraints) Performing minimization step: 1094. Total energy = 1349 kcal/mol (1347 without restraints) Performing minimization step: 1095. Total energy = 1349 kcal/mol (1347 without restraints) Performing minimization step: 1096. Total energy = 1349 kcal/mol (1346 without restraints) Performing minimization step: 1097. Total energy = 1349 kcal/mol (1346 without restraints) Performing minimization step: 1098. Total energy = 1348 kcal/mol (1346 without restraints) Performing minimization step: 1099. Total energy = 1348 kcal/mol (1346 without restraints) Performing minimization step: 1100. Total energy = 1348 kcal/mol (1346 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/90a3fe85/tmp/apt_refx/apt_refx.pdb ...Done. Performing minimization step: 1101. Total energy = 1348 kcal/mol (1345 without restraints) Performing minimization step: 1102. Total energy = 1348 kcal/mol (1345 without restraints) Performing minimization step: 1103. Total energy = 1347 kcal/mol (1345 without restraints) Performing minimization step: 1104. Total energy = 1347 kcal/mol (1345 without restraints) Performing minimization step: 1105. Total energy = 1347 kcal/mol (1345 without restraints) Performing minimization step: 1106. Total energy = 1347 kcal/mol (1344 without restraints) Performing minimization step: 1107. Total energy = 1346 kcal/mol (1344 without restraints) Performing minimization step: 1108. Total energy = 1346 kcal/mol (1344 without restraints) Performing minimization step: 1109. Total energy = 1346 kcal/mol (1344 without restraints) Performing minimization step: 1110. Total energy = 1346 kcal/mol (1344 without restraints) Performing minimization step: 1111. Total energy = 1346 kcal/mol (1343 without restraints) Performing minimization step: 1112. Total energy = 1345 kcal/mol (1343 without restraints) Performing minimization step: 1113. Total energy = 1345 kcal/mol (1343 without restraints) Performing minimization step: 1114. Total energy = 1345 kcal/mol (1343 without restraints) Performing minimization step: 1115. Total energy = 1345 kcal/mol (1342 without restraints) Performing minimization step: 1116. Total energy = 1345 kcal/mol (1342 without restraints) Performing minimization step: 1117. Total energy = 1344 kcal/mol (1342 without restraints) Performing minimization step: 1118. Total energy = 1344 kcal/mol (1342 without restraints) Performing minimization step: 1119. Total energy = 1344 kcal/mol (1342 without restraints) Performing minimization step: 1120. Total energy = 1344 kcal/mol (1341 without restraints) Performing minimization step: 1121. Total energy = 1344 kcal/mol (1341 without restraints) Performing minimization step: 1122. Total energy = 1343 kcal/mol (1341 without restraints) Performing minimization step: 1123. Total energy = 1343 kcal/mol (1341 without restraints) Performing minimization step: 1124. Total energy = 1343 kcal/mol (1341 without restraints) Performing minimization step: 1125. Total energy = 1343 kcal/mol (1340 without restraints) Performing minimization step: 1126. Total energy = 1343 kcal/mol (1340 without restraints) Performing minimization step: 1127. Total energy = 1342 kcal/mol (1340 without restraints) Performing minimization step: 1128. Total energy = 1342 kcal/mol (1340 without restraints) Performing minimization step: 1129. Total energy = 1342 kcal/mol (1340 without restraints) Performing minimization step: 1130. Total energy = 1342 kcal/mol (1339 without restraints) Performing minimization step: 1131. Total energy = 1341 kcal/mol (1339 without restraints) Performing minimization step: 1132. Total energy = 1341 kcal/mol (1339 without restraints) Performing minimization step: 1133. Total energy = 1341 kcal/mol (1339 without restraints) Performing minimization step: 1134. Total energy = 1341 kcal/mol (1339 without restraints) Performing minimization step: 1135. Total energy = 1341 kcal/mol (1338 without restraints) Performing minimization step: 1136. Total energy = 1340 kcal/mol (1338 without restraints) Performing minimization step: 1137. Total energy = 1340 kcal/mol (1338 without restraints) Performing minimization step: 1138. Total energy = 1340 kcal/mol (1338 without restraints) Performing minimization step: 1139. Total energy = 1340 kcal/mol (1338 without restraints) Performing minimization step: 1140. Total energy = 1340 kcal/mol (1337 without restraints) Performing minimization step: 1141. Total energy = 1339 kcal/mol (1337 without restraints) Performing minimization step: 1142. Total energy = 1339 kcal/mol (1337 without restraints) Performing minimization step: 1143. Total energy = 1339 kcal/mol (1337 without restraints) Performing minimization step: 1144. Total energy = 1339 kcal/mol (1337 without restraints) Performing minimization step: 1145. Total energy = 1339 kcal/mol (1336 without restraints) Performing minimization step: 1146. Total energy = 1338 kcal/mol (1336 without restraints) Performing minimization step: 1147. Total energy = 1338 kcal/mol (1336 without restraints) Performing minimization step: 1148. Total energy = 1338 kcal/mol (1336 without restraints) Performing minimization step: 1149. Total energy = 1338 kcal/mol (1336 without restraints) Performing minimization step: 1150. Total energy = 1338 kcal/mol (1335 without restraints) Performing minimization step: 1151. Total energy = 1337 kcal/mol (1335 without restraints) Performing minimization step: 1152. Total energy = 1337 kcal/mol (1335 without restraints) Performing minimization step: 1153. Total energy = 1337 kcal/mol (1335 without restraints) Performing minimization step: 1154. Total energy = 1337 kcal/mol (1335 without restraints) Performing minimization step: 1155. Total energy = 1337 kcal/mol (1334 without restraints) Performing minimization step: 1156. Total energy = 1336 kcal/mol (1334 without restraints) Performing minimization step: 1157. Total energy = 1336 kcal/mol (1334 without restraints) Performing minimization step: 1158. Total energy = 1336 kcal/mol (1334 without restraints) Performing minimization step: 1159. Total energy = 1336 kcal/mol (1334 without restraints) Performing minimization step: 1160. Total energy = 1336 kcal/mol (1333 without restraints) Performing minimization step: 1161. Total energy = 1335 kcal/mol (1333 without restraints) Performing minimization step: 1162. Total energy = 1335 kcal/mol (1333 without restraints) Performing minimization step: 1163. Total energy = 1335 kcal/mol (1333 without restraints) Performing minimization step: 1164. Total energy = 1335 kcal/mol (1333 without restraints) Performing minimization step: 1165. Total energy = 1335 kcal/mol (1332 without restraints) Performing minimization step: 1166. Total energy = 1335 kcal/mol (1332 without restraints) Performing minimization step: 1167. Total energy = 1334 kcal/mol (1332 without restraints) Performing minimization step: 1168. Total energy = 1334 kcal/mol (1332 without restraints) Performing minimization step: 1169. Total energy = 1334 kcal/mol (1332 without restraints) Performing minimization step: 1170. Total energy = 1334 kcal/mol (1332 without restraints) Performing minimization step: 1171. Total energy = 1334 kcal/mol (1331 without restraints) Performing minimization step: 1172. Total energy = 1333 kcal/mol (1331 without restraints) Performing minimization step: 1173. Total energy = 1333 kcal/mol (1331 without restraints) Performing minimization step: 1174. Total energy = 1333 kcal/mol (1331 without restraints) Performing minimization step: 1175. Total energy = 1333 kcal/mol (1331 without restraints) Performing minimization step: 1176. Total energy = 1333 kcal/mol (1330 without restraints) Performing minimization step: 1177. Total energy = 1332 kcal/mol (1330 without restraints) Performing minimization step: 1178. Total energy = 1332 kcal/mol (1330 without restraints) Performing minimization step: 1179. Total energy = 1332 kcal/mol (1330 without restraints) Performing minimization step: 1180. Total energy = 1332 kcal/mol (1330 without restraints) Performing minimization step: 1181. Total energy = 1332 kcal/mol (1329 without restraints) Performing minimization step: 1182. Total energy = 1331 kcal/mol (1329 without restraints) Performing minimization step: 1183. Total energy = 1331 kcal/mol (1329 without restraints) Performing minimization step: 1184. Total energy = 1331 kcal/mol (1329 without restraints) Performing minimization step: 1185. Total energy = 1331 kcal/mol (1329 without restraints) Performing minimization step: 1186. Total energy = 1331 kcal/mol (1328 without restraints) Performing minimization step: 1187. Total energy = 1330 kcal/mol (1328 without restraints) Performing minimization step: 1188. Total energy = 1330 kcal/mol (1328 without restraints) Performing minimization step: 1189. Total energy = 1330 kcal/mol (1328 without restraints) Performing minimization step: 1190. Total energy = 1330 kcal/mol (1328 without restraints) Performing minimization step: 1191. Total energy = 1330 kcal/mol (1328 without restraints) Performing minimization step: 1192. Total energy = 1330 kcal/mol (1327 without restraints) Performing minimization step: 1193. Total energy = 1329 kcal/mol (1327 without restraints) Performing minimization step: 1194. Total energy = 1329 kcal/mol (1327 without restraints) Performing minimization step: 1195. Total energy = 1329 kcal/mol (1327 without restraints) Performing minimization step: 1196. Total energy = 1329 kcal/mol (1327 without restraints) Performing minimization step: 1197. Total energy = 1329 kcal/mol (1326 without restraints) Performing minimization step: 1198. Total energy = 1328 kcal/mol (1326 without restraints) Performing minimization step: 1199. Total energy = 1328 kcal/mol (1326 without restraints) Performing minimization step: 1200. Total energy = 1328 kcal/mol (1326 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/90a3fe85/tmp/apt_refx/apt_refx.pdb ...Done. Performing minimization step: 1201. Total energy = 1328 kcal/mol (1326 without restraints) Performing minimization step: 1202. Total energy = 1328 kcal/mol (1325 without restraints) Performing minimization step: 1203. Total energy = 1327 kcal/mol (1325 without restraints) Performing minimization step: 1204. Total energy = 1327 kcal/mol (1325 without restraints) Performing minimization step: 1205. Total energy = 1327 kcal/mol (1325 without restraints) Performing minimization step: 1206. Total energy = 1327 kcal/mol (1325 without restraints) Performing minimization step: 1207. Total energy = 1327 kcal/mol (1325 without restraints) Performing minimization step: 1208. Total energy = 1327 kcal/mol (1324 without restraints) Performing minimization step: 1209. Total energy = 1326 kcal/mol (1324 without restraints) Performing minimization step: 1210. Total energy = 1326 kcal/mol (1324 without restraints) Performing minimization step: 1211. Total energy = 1326 kcal/mol (1324 without restraints) Performing minimization step: 1212. Total energy = 1326 kcal/mol (1324 without restraints) Performing minimization step: 1213. Total energy = 1326 kcal/mol (1323 without restraints) Performing minimization step: 1214. Total energy = 1325 kcal/mol (1323 without restraints) Performing minimization step: 1215. Total energy = 1325 kcal/mol (1323 without restraints) Performing minimization step: 1216. Total energy = 1325 kcal/mol (1323 without restraints) Performing minimization step: 1217. Total energy = 1325 kcal/mol (1323 without restraints) Performing minimization step: 1218. Total energy = 1325 kcal/mol (1323 without restraints) Performing minimization step: 1219. Total energy = 1324 kcal/mol (1322 without restraints) Performing minimization step: 1220. Total energy = 1324 kcal/mol (1322 without restraints) Performing minimization step: 1221. Total energy = 1324 kcal/mol (1322 without restraints) Performing minimization step: 1222. Total energy = 1324 kcal/mol (1322 without restraints) Performing minimization step: 1223. Total energy = 1324 kcal/mol (1322 without restraints) Performing minimization step: 1224. Total energy = 1324 kcal/mol (1321 without restraints) Performing minimization step: 1225. Total energy = 1323 kcal/mol (1321 without restraints) Performing minimization step: 1226. Total energy = 1323 kcal/mol (1321 without restraints) Performing minimization step: 1227. Total energy = 1323 kcal/mol (1321 without restraints) Performing minimization step: 1228. Total energy = 1323 kcal/mol (1321 without restraints) Performing minimization step: 1229. Total energy = 1323 kcal/mol (1321 without restraints) Performing minimization step: 1230. Total energy = 1322 kcal/mol (1320 without restraints) Performing minimization step: 1231. Total energy = 1322 kcal/mol (1320 without restraints) Performing minimization step: 1232. Total energy = 1322 kcal/mol (1320 without restraints) Performing minimization step: 1233. Total energy = 1322 kcal/mol (1320 without restraints) Performing minimization step: 1234. Total energy = 1322 kcal/mol (1320 without restraints) Performing minimization step: 1235. Total energy = 1322 kcal/mol (1319 without restraints) Performing minimization step: 1236. Total energy = 1321 kcal/mol (1319 without restraints) Performing minimization step: 1237. Total energy = 1321 kcal/mol (1319 without restraints) Performing minimization step: 1238. Total energy = 1321 kcal/mol (1319 without restraints) Performing minimization step: 1239. Total energy = 1321 kcal/mol (1319 without restraints) Performing minimization step: 1240. Total energy = 1321 kcal/mol (1319 without restraints) Performing minimization step: 1241. Total energy = 1320 kcal/mol (1318 without restraints) Performing minimization step: 1242. Total energy = 1320 kcal/mol (1318 without restraints) Performing minimization step: 1243. Total energy = 1320 kcal/mol (1318 without restraints) Performing minimization step: 1244. Total energy = 1320 kcal/mol (1318 without restraints) Performing minimization step: 1245. Total energy = 1320 kcal/mol (1318 without restraints) Performing minimization step: 1246. Total energy = 1320 kcal/mol (1317 without restraints) Performing minimization step: 1247. Total energy = 1319 kcal/mol (1317 without restraints) Performing minimization step: 1248. Total energy = 1319 kcal/mol (1317 without restraints) Performing minimization step: 1249. Total energy = 1319 kcal/mol (1317 without restraints) Performing minimization step: 1250. Total energy = 1319 kcal/mol (1317 without restraints) Performing minimization step: 1251. Total energy = 1319 kcal/mol (1317 without restraints) Performing minimization step: 1252. Total energy = 1319 kcal/mol (1316 without restraints) Performing minimization step: 1253. Total energy = 1318 kcal/mol (1316 without restraints) Performing minimization step: 1254. Total energy = 1318 kcal/mol (1316 without restraints) Performing minimization step: 1255. Total energy = 1318 kcal/mol (1316 without restraints) Performing minimization step: 1256. Total energy = 1318 kcal/mol (1316 without restraints) Performing minimization step: 1257. Total energy = 1318 kcal/mol (1316 without restraints) Performing minimization step: 1258. Total energy = 1317 kcal/mol (1315 without restraints) Performing minimization step: 1259. Total energy = 1317 kcal/mol (1315 without restraints) Performing minimization step: 1260. Total energy = 1317 kcal/mol (1315 without restraints) Performing minimization step: 1261. Total energy = 1317 kcal/mol (1315 without restraints) Performing minimization step: 1262. Total energy = 1317 kcal/mol (1315 without restraints) Performing minimization step: 1263. Total energy = 1317 kcal/mol (1314 without restraints) Performing minimization step: 1264. Total energy = 1316 kcal/mol (1314 without restraints) Performing minimization step: 1265. Total energy = 1316 kcal/mol (1314 without restraints) Performing minimization step: 1266. Total energy = 1316 kcal/mol (1314 without restraints) Performing minimization step: 1267. Total energy = 1316 kcal/mol (1314 without restraints) Performing minimization step: 1268. Total energy = 1316 kcal/mol (1314 without restraints) Performing minimization step: 1269. Total energy = 1316 kcal/mol (1313 without restraints) Performing minimization step: 1270. Total energy = 1315 kcal/mol (1313 without restraints) Performing minimization step: 1271. Total energy = 1315 kcal/mol (1313 without restraints) Performing minimization step: 1272. Total energy = 1315 kcal/mol (1313 without restraints) Performing minimization step: 1273. Total energy = 1315 kcal/mol (1313 without restraints) Performing minimization step: 1274. Total energy = 1315 kcal/mol (1313 without restraints) Performing minimization step: 1275. Total energy = 1314 kcal/mol (1312 without restraints) Performing minimization step: 1276. Total energy = 1314 kcal/mol (1312 without restraints) Performing minimization step: 1277. Total energy = 1314 kcal/mol (1312 without restraints) Performing minimization step: 1278. Total energy = 1314 kcal/mol (1312 without restraints) Performing minimization step: 1279. Total energy = 1314 kcal/mol (1312 without restraints) Performing minimization step: 1280. Total energy = 1314 kcal/mol (1312 without restraints) Performing minimization step: 1281. Total energy = 1313 kcal/mol (1311 without restraints) Performing minimization step: 1282. Total energy = 1313 kcal/mol (1311 without restraints) Performing minimization step: 1283. Total energy = 1313 kcal/mol (1311 without restraints) Performing minimization step: 1284. Total energy = 1313 kcal/mol (1311 without restraints) Performing minimization step: 1285. Total energy = 1313 kcal/mol (1311 without restraints) Performing minimization step: 1286. Total energy = 1313 kcal/mol (1311 without restraints) Performing minimization step: 1287. Total energy = 1312 kcal/mol (1310 without restraints) Performing minimization step: 1288. Total energy = 1312 kcal/mol (1310 without restraints) Performing minimization step: 1289. Total energy = 1312 kcal/mol (1310 without restraints) Performing minimization step: 1290. Total energy = 1312 kcal/mol (1310 without restraints) Performing minimization step: 1291. Total energy = 1312 kcal/mol (1310 without restraints) Performing minimization step: 1292. Total energy = 1312 kcal/mol (1309 without restraints) Performing minimization step: 1293. Total energy = 1311 kcal/mol (1309 without restraints) Performing minimization step: 1294. Total energy = 1311 kcal/mol (1309 without restraints) Performing minimization step: 1295. Total energy = 1311 kcal/mol (1309 without restraints) Performing minimization step: 1296. Total energy = 1311 kcal/mol (1309 without restraints) Performing minimization step: 1297. Total energy = 1311 kcal/mol (1309 without restraints) Performing minimization step: 1298. Total energy = 1311 kcal/mol (1308 without restraints) Performing minimization step: 1299. Total energy = 1310 kcal/mol (1308 without restraints) Performing minimization step: 1300. Total energy = 1310 kcal/mol (1308 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/90a3fe85/tmp/apt_refx/apt_refx.pdb ...Done. Performing minimization step: 1301. Total energy = 1310 kcal/mol (1308 without restraints) Performing minimization step: 1302. Total energy = 1310 kcal/mol (1308 without restraints) Performing minimization step: 1303. Total energy = 1310 kcal/mol (1308 without restraints) Performing minimization step: 1304. Total energy = 1310 kcal/mol (1307 without restraints) Performing minimization step: 1305. Total energy = 1309 kcal/mol (1307 without restraints) Performing minimization step: 1306. Total energy = 1309 kcal/mol (1307 without restraints) Performing minimization step: 1307. Total energy = 1309 kcal/mol (1307 without restraints) Performing minimization step: 1308. Total energy = 1309 kcal/mol (1307 without restraints) Performing minimization step: 1309. Total energy = 1309 kcal/mol (1307 without restraints) Performing minimization step: 1310. Total energy = 1309 kcal/mol (1306 without restraints) Performing minimization step: 1311. Total energy = 1308 kcal/mol (1306 without restraints) Performing minimization step: 1312. Total energy = 1308 kcal/mol (1306 without restraints) Performing minimization step: 1313. Total energy = 1308 kcal/mol (1306 without restraints) Performing minimization step: 1314. Total energy = 1308 kcal/mol (1306 without restraints) Performing minimization step: 1315. Total energy = 1308 kcal/mol (1306 without restraints) Performing minimization step: 1316. Total energy = 1308 kcal/mol (1305 without restraints) Performing minimization step: 1317. Total energy = 1307 kcal/mol (1305 without restraints) Performing minimization step: 1318. Total energy = 1307 kcal/mol (1305 without restraints) Performing minimization step: 1319. Total energy = 1307 kcal/mol (1305 without restraints) Performing minimization step: 1320. Total energy = 1307 kcal/mol (1305 without restraints) Performing minimization step: 1321. Total energy = 1307 kcal/mol (1305 without restraints) Performing minimization step: 1322. Total energy = 1307 kcal/mol (1304 without restraints) Performing minimization step: 1323. Total energy = 1306 kcal/mol (1304 without restraints) Performing minimization step: 1324. Total energy = 1306 kcal/mol (1304 without restraints) Performing minimization step: 1325. Total energy = 1306 kcal/mol (1304 without restraints) Performing minimization step: 1326. Total energy = 1306 kcal/mol (1304 without restraints) Performing minimization step: 1327. Total energy = 1306 kcal/mol (1304 without restraints) Performing minimization step: 1328. Total energy = 1306 kcal/mol (1303 without restraints) Performing minimization step: 1329. Total energy = 1305 kcal/mol (1303 without restraints) Performing minimization step: 1330. Total energy = 1305 kcal/mol (1303 without restraints) Performing minimization step: 1331. Total energy = 1305 kcal/mol (1303 without restraints) Performing minimization step: 1332. Total energy = 1305 kcal/mol (1303 without restraints) Performing minimization step: 1333. Total energy = 1305 kcal/mol (1303 without restraints) Performing minimization step: 1334. Total energy = 1305 kcal/mol (1303 without restraints) Performing minimization step: 1335. Total energy = 1304 kcal/mol (1302 without restraints) Performing minimization step: 1336. Total energy = 1304 kcal/mol (1302 without restraints) Performing minimization step: 1337. Total energy = 1304 kcal/mol (1302 without restraints) Performing minimization step: 1338. Total energy = 1304 kcal/mol (1302 without restraints) Performing minimization step: 1339. Total energy = 1304 kcal/mol (1302 without restraints) Performing minimization step: 1340. Total energy = 1304 kcal/mol (1302 without restraints) Performing minimization step: 1341. Total energy = 1303 kcal/mol (1301 without restraints) Performing minimization step: 1342. Total energy = 1303 kcal/mol (1301 without restraints) Performing minimization step: 1343. Total energy = 1303 kcal/mol (1301 without restraints) Performing minimization step: 1344. Total energy = 1303 kcal/mol (1301 without restraints) Performing minimization step: 1345. Total energy = 1303 kcal/mol (1301 without restraints) Performing minimization step: 1346. Total energy = 1303 kcal/mol (1301 without restraints) Performing minimization step: 1347. Total energy = 1302 kcal/mol (1300 without restraints) Performing minimization step: 1348. Total energy = 1302 kcal/mol (1300 without restraints) Performing minimization step: 1349. Total energy = 1302 kcal/mol (1300 without restraints) Performing minimization step: 1350. Total energy = 1302 kcal/mol (1300 without restraints) Performing minimization step: 1351. Total energy = 1302 kcal/mol (1300 without restraints) Performing minimization step: 1352. Total energy = 1302 kcal/mol (1300 without restraints) Performing minimization step: 1353. Total energy = 1301 kcal/mol (1299 without restraints) Performing minimization step: 1354. Total energy = 1301 kcal/mol (1299 without restraints) Performing minimization step: 1355. Total energy = 1301 kcal/mol (1299 without restraints) Performing minimization step: 1356. Total energy = 1301 kcal/mol (1299 without restraints) Performing minimization step: 1357. Total energy = 1301 kcal/mol (1299 without restraints) Performing minimization step: 1358. Total energy = 1301 kcal/mol (1299 without restraints) Performing minimization step: 1359. Total energy = 1301 kcal/mol (1298 without restraints) Performing minimization step: 1360. Total energy = 1300 kcal/mol (1298 without restraints) Performing minimization step: 1361. Total energy = 1300 kcal/mol (1298 without restraints) Performing minimization step: 1362. Total energy = 1300 kcal/mol (1298 without restraints) Performing minimization step: 1363. Total energy = 1300 kcal/mol (1298 without restraints) Performing minimization step: 1364. Total energy = 1300 kcal/mol (1298 without restraints) Performing minimization step: 1365. Total energy = 1300 kcal/mol (1298 without restraints) Performing minimization step: 1366. Total energy = 1299 kcal/mol (1297 without restraints) Performing minimization step: 1367. Total energy = 1299 kcal/mol (1297 without restraints) Performing minimization step: 1368. Total energy = 1299 kcal/mol (1297 without restraints) Performing minimization step: 1369. Total energy = 1299 kcal/mol (1297 without restraints) Performing minimization step: 1370. Total energy = 1299 kcal/mol (1297 without restraints) Performing minimization step: 1371. Total energy = 1299 kcal/mol (1297 without restraints) Performing minimization step: 1372. Total energy = 1298 kcal/mol (1296 without restraints) Performing minimization step: 1373. Total energy = 1298 kcal/mol (1296 without restraints) Performing minimization step: 1374. Total energy = 1298 kcal/mol (1296 without restraints) Performing minimization step: 1375. Total energy = 1298 kcal/mol (1296 without restraints) Performing minimization step: 1376. Total energy = 1298 kcal/mol (1296 without restraints) Performing minimization step: 1377. Total energy = 1298 kcal/mol (1296 without restraints) Performing minimization step: 1378. Total energy = 1298 kcal/mol (1296 without restraints) Performing minimization step: 1379. Total energy = 1297 kcal/mol (1295 without restraints) Performing minimization step: 1380. Total energy = 1297 kcal/mol (1295 without restraints) Performing minimization step: 1381. Total energy = 1297 kcal/mol (1295 without restraints) Performing minimization step: 1382. Total energy = 1297 kcal/mol (1295 without restraints) Performing minimization step: 1383. Total energy = 1297 kcal/mol (1295 without restraints) Performing minimization step: 1384. Total energy = 1297 kcal/mol (1295 without restraints) Performing minimization step: 1385. Total energy = 1296 kcal/mol (1294 without restraints) Performing minimization step: 1386. Total energy = 1296 kcal/mol (1294 without restraints) Performing minimization step: 1387. Total energy = 1296 kcal/mol (1294 without restraints) Performing minimization step: 1388. Total energy = 1296 kcal/mol (1294 without restraints) Performing minimization step: 1389. Total energy = 1296 kcal/mol (1294 without restraints) Performing minimization step: 1390. Total energy = 1296 kcal/mol (1294 without restraints) Performing minimization step: 1391. Total energy = 1295 kcal/mol (1293 without restraints) Performing minimization step: 1392. Total energy = 1295 kcal/mol (1293 without restraints) Performing minimization step: 1393. Total energy = 1295 kcal/mol (1293 without restraints) Performing minimization step: 1394. Total energy = 1295 kcal/mol (1293 without restraints) Performing minimization step: 1395. Total energy = 1295 kcal/mol (1293 without restraints) Performing minimization step: 1396. Total energy = 1295 kcal/mol (1293 without restraints) Performing minimization step: 1397. Total energy = 1295 kcal/mol (1293 without restraints) Performing minimization step: 1398. Total energy = 1294 kcal/mol (1292 without restraints) Performing minimization step: 1399. Total energy = 1294 kcal/mol (1292 without restraints) Performing minimization step: 1400. Total energy = 1294 kcal/mol (1292 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/90a3fe85/tmp/apt_refx/apt_refx.pdb ...Done. Performing minimization step: 1401. Total energy = 1294 kcal/mol (1292 without restraints) Performing minimization step: 1402. Total energy = 1294 kcal/mol (1292 without restraints) Performing minimization step: 1403. Total energy = 1294 kcal/mol (1292 without restraints) Performing minimization step: 1404. Total energy = 1293 kcal/mol (1291 without restraints) Performing minimization step: 1405. Total energy = 1293 kcal/mol (1291 without restraints) Performing minimization step: 1406. Total energy = 1293 kcal/mol (1291 without restraints) Performing minimization step: 1407. Total energy = 1293 kcal/mol (1291 without restraints) Performing minimization step: 1408. Total energy = 1293 kcal/mol (1291 without restraints) Performing minimization step: 1409. Total energy = 1293 kcal/mol (1291 without restraints) Performing minimization step: 1410. Total energy = 1293 kcal/mol (1291 without restraints) Performing minimization step: 1411. Total energy = 1292 kcal/mol (1290 without restraints) Performing minimization step: 1412. Total energy = 1292 kcal/mol (1290 without restraints) Performing minimization step: 1413. Total energy = 1292 kcal/mol (1290 without restraints) Performing minimization step: 1414. Total energy = 1292 kcal/mol (1290 without restraints) Performing minimization step: 1415. Total energy = 1292 kcal/mol (1290 without restraints) Performing minimization step: 1416. Total energy = 1292 kcal/mol (1290 without restraints) Performing minimization step: 1417. Total energy = 1292 kcal/mol (1290 without restraints) Performing minimization step: 1418. Total energy = 1291 kcal/mol (1289 without restraints) Performing minimization step: 1419. Total energy = 1291 kcal/mol (1289 without restraints) Performing minimization step: 1420. Total energy = 1291 kcal/mol (1289 without restraints) Performing minimization step: 1421. Total energy = 1291 kcal/mol (1289 without restraints) Performing minimization step: 1422. Total energy = 1291 kcal/mol (1289 without restraints) Performing minimization step: 1423. Total energy = 1291 kcal/mol (1289 without restraints) Performing minimization step: 1424. Total energy = 1290 kcal/mol (1288 without restraints) Performing minimization step: 1425. Total energy = 1290 kcal/mol (1288 without restraints) Performing minimization step: 1426. Total energy = 1290 kcal/mol (1288 without restraints) Performing minimization step: 1427. Total energy = 1290 kcal/mol (1288 without restraints) Performing minimization step: 1428. Total energy = 1290 kcal/mol (1288 without restraints) Performing minimization step: 1429. Total energy = 1290 kcal/mol (1288 without restraints) Performing minimization step: 1430. Total energy = 1290 kcal/mol (1288 without restraints) Performing minimization step: 1431. Total energy = 1289 kcal/mol (1287 without restraints) Performing minimization step: 1432. Total energy = 1289 kcal/mol (1287 without restraints) Performing minimization step: 1433. Total energy = 1289 kcal/mol (1287 without restraints) Performing minimization step: 1434. Total energy = 1289 kcal/mol (1287 without restraints) Performing minimization step: 1435. Total energy = 1289 kcal/mol (1287 without restraints) Performing minimization step: 1436. Total energy = 1289 kcal/mol (1287 without restraints) Performing minimization step: 1437. Total energy = 1288 kcal/mol (1287 without restraints) Performing minimization step: 1438. Total energy = 1288 kcal/mol (1286 without restraints) Performing minimization step: 1439. Total energy = 1288 kcal/mol (1286 without restraints) Performing minimization step: 1440. Total energy = 1288 kcal/mol (1286 without restraints) Performing minimization step: 1441. Total energy = 1288 kcal/mol (1286 without restraints) Performing minimization step: 1442. Total energy = 1288 kcal/mol (1286 without restraints) Performing minimization step: 1443. Total energy = 1288 kcal/mol (1286 without restraints) Performing minimization step: 1444. Total energy = 1287 kcal/mol (1285 without restraints) Performing minimization step: 1445. Total energy = 1287 kcal/mol (1285 without restraints) Performing minimization step: 1446. Total energy = 1287 kcal/mol (1285 without restraints) Performing minimization step: 1447. Total energy = 1287 kcal/mol (1285 without restraints) Performing minimization step: 1448. Total energy = 1287 kcal/mol (1285 without restraints) Performing minimization step: 1449. Total energy = 1287 kcal/mol (1285 without restraints) Performing minimization step: 1450. Total energy = 1287 kcal/mol (1285 without restraints) Performing minimization step: 1451. Total energy = 1286 kcal/mol (1284 without restraints) Performing minimization step: 1452. Total energy = 1286 kcal/mol (1284 without restraints) Performing minimization step: 1453. Total energy = 1286 kcal/mol (1284 without restraints) Performing minimization step: 1454. Total energy = 1286 kcal/mol (1284 without restraints) Performing minimization step: 1455. Total energy = 1286 kcal/mol (1284 without restraints) Performing minimization step: 1456. Total energy = 1286 kcal/mol (1284 without restraints) Performing minimization step: 1457. Total energy = 1286 kcal/mol (1284 without restraints) Performing minimization step: 1458. Total energy = 1285 kcal/mol (1283 without restraints) Performing minimization step: 1459. Total energy = 1285 kcal/mol (1283 without restraints) Performing minimization step: 1460. Total energy = 1285 kcal/mol (1283 without restraints) Performing minimization step: 1461. Total energy = 1285 kcal/mol (1283 without restraints) Performing minimization step: 1462. Total energy = 1285 kcal/mol (1283 without restraints) Performing minimization step: 1463. Total energy = 1285 kcal/mol (1283 without restraints) Performing minimization step: 1464. Total energy = 1285 kcal/mol (1283 without restraints) Performing minimization step: 1465. Total energy = 1284 kcal/mol (1282 without restraints) Performing minimization step: 1466. Total energy = 1284 kcal/mol (1282 without restraints) Performing minimization step: 1467. Total energy = 1284 kcal/mol (1282 without restraints) Performing minimization step: 1468. Total energy = 1284 kcal/mol (1282 without restraints) Performing minimization step: 1469. Total energy = 1284 kcal/mol (1282 without restraints) Performing minimization step: 1470. Total energy = 1284 kcal/mol (1282 without restraints) Performing minimization step: 1471. Total energy = 1284 kcal/mol (1282 without restraints) Performing minimization step: 1472. Total energy = 1283 kcal/mol (1281 without restraints) Performing minimization step: 1473. Total energy = 1283 kcal/mol (1281 without restraints) Performing minimization step: 1474. Total energy = 1283 kcal/mol (1281 without restraints) Performing minimization step: 1475. Total energy = 1283 kcal/mol (1281 without restraints) Performing minimization step: 1476. Total energy = 1283 kcal/mol (1281 without restraints) Performing minimization step: 1477. Total energy = 1283 kcal/mol (1281 without restraints) Performing minimization step: 1478. Total energy = 1282 kcal/mol (1281 without restraints) Performing minimization step: 1479. Total energy = 1282 kcal/mol (1280 without restraints) Performing minimization step: 1480. Total energy = 1282 kcal/mol (1280 without restraints) Performing minimization step: 1481. Total energy = 1282 kcal/mol (1280 without restraints) Performing minimization step: 1482. Total energy = 1282 kcal/mol (1280 without restraints) Performing minimization step: 1483. Total energy = 1282 kcal/mol (1280 without restraints) Performing minimization step: 1484. Total energy = 1282 kcal/mol (1280 without restraints) Performing minimization step: 1485. Total energy = 1281 kcal/mol (1280 without restraints) Performing minimization step: 1486. Total energy = 1281 kcal/mol (1279 without restraints) Performing minimization step: 1487. Total energy = 1281 kcal/mol (1279 without restraints) Performing minimization step: 1488. Total energy = 1281 kcal/mol (1279 without restraints) Performing minimization step: 1489. Total energy = 1281 kcal/mol (1279 without restraints) Performing minimization step: 1490. Total energy = 1281 kcal/mol (1279 without restraints) Performing minimization step: 1491. Total energy = 1281 kcal/mol (1279 without restraints) Performing minimization step: 1492. Total energy = 1280 kcal/mol (1279 without restraints) Performing minimization step: 1493. Total energy = 1280 kcal/mol (1278 without restraints) Performing minimization step: 1494. Total energy = 1280 kcal/mol (1278 without restraints) Performing minimization step: 1495. Total energy = 1280 kcal/mol (1278 without restraints) Performing minimization step: 1496. Total energy = 1280 kcal/mol (1278 without restraints) Performing minimization step: 1497. Total energy = 1280 kcal/mol (1278 without restraints) Performing minimization step: 1498. Total energy = 1280 kcal/mol (1278 without restraints) Performing minimization step: 1499. Total energy = 1279 kcal/mol (1278 without restraints) Performing minimization step: 1500. Total energy = 1279 kcal/mol (1277 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/90a3fe85/tmp/apt_refx/apt_refx.pdb ...Done. Performing minimization step: 1501. Total energy = 1279 kcal/mol (1277 without restraints) Performing minimization step: 1502. Total energy = 1279 kcal/mol (1277 without restraints) Performing minimization step: 1503. Total energy = 1279 kcal/mol (1277 without restraints) Performing minimization step: 1504. Total energy = 1279 kcal/mol (1277 without restraints) Performing minimization step: 1505. Total energy = 1279 kcal/mol (1277 without restraints) Performing minimization step: 1506. Total energy = 1279 kcal/mol (1277 without restraints) Performing minimization step: 1507. Total energy = 1278 kcal/mol (1276 without restraints) Performing minimization step: 1508. Total energy = 1278 kcal/mol (1276 without restraints) Performing minimization step: 1509. Total energy = 1278 kcal/mol (1276 without restraints) Performing minimization step: 1510. Total energy = 1278 kcal/mol (1276 without restraints) Performing minimization step: 1511. Total energy = 1278 kcal/mol (1276 without restraints) Performing minimization step: 1512. Total energy = 1278 kcal/mol (1276 without restraints) Performing minimization step: 1513. Total energy = 1278 kcal/mol (1276 without restraints) Performing minimization step: 1514. Total energy = 1277 kcal/mol (1275 without restraints) Performing minimization step: 1515. Total energy = 1277 kcal/mol (1275 without restraints) Performing minimization step: 1516. Total energy = 1277 kcal/mol (1275 without restraints) Performing minimization step: 1517. Total energy = 1277 kcal/mol (1275 without restraints) Performing minimization step: 1518. Total energy = 1277 kcal/mol (1275 without restraints) Performing minimization step: 1519. Total energy = 1277 kcal/mol (1275 without restraints) Performing minimization step: 1520. Total energy = 1277 kcal/mol (1275 without restraints) Performing minimization step: 1521. Total energy = 1276 kcal/mol (1274 without restraints) Performing minimization step: 1522. Total energy = 1276 kcal/mol (1274 without restraints) Performing minimization step: 1523. Total energy = 1276 kcal/mol (1274 without restraints) Performing minimization step: 1524. Total energy = 1276 kcal/mol (1274 without restraints) Performing minimization step: 1525. Total energy = 1276 kcal/mol (1274 without restraints) Performing minimization step: 1526. Total energy = 1276 kcal/mol (1274 without restraints) Performing minimization step: 1527. Total energy = 1276 kcal/mol (1274 without restraints) Performing minimization step: 1528. Total energy = 1275 kcal/mol (1274 without restraints) Performing minimization step: 1529. Total energy = 1275 kcal/mol (1273 without restraints) Performing minimization step: 1530. Total energy = 1275 kcal/mol (1273 without restraints) Performing minimization step: 1531. Total energy = 1275 kcal/mol (1273 without restraints) Performing minimization step: 1532. Total energy = 1275 kcal/mol (1273 without restraints) Performing minimization step: 1533. Total energy = 1275 kcal/mol (1273 without restraints) Performing minimization step: 1534. Total energy = 1275 kcal/mol (1273 without restraints) Performing minimization step: 1535. Total energy = 1274 kcal/mol (1273 without restraints) Performing minimization step: 1536. Total energy = 1274 kcal/mol (1272 without restraints) Performing minimization step: 1537. Total energy = 1274 kcal/mol (1272 without restraints) Performing minimization step: 1538. Total energy = 1274 kcal/mol (1272 without restraints) Performing minimization step: 1539. Total energy = 1274 kcal/mol (1272 without restraints) Performing minimization step: 1540. Total energy = 1274 kcal/mol (1272 without restraints) Performing minimization step: 1541. Total energy = 1274 kcal/mol (1272 without restraints) Performing minimization step: 1542. Total energy = 1274 kcal/mol (1272 without restraints) Performing minimization step: 1543. Total energy = 1273 kcal/mol (1271 without restraints) Performing minimization step: 1544. Total energy = 1273 kcal/mol (1271 without restraints) Performing minimization step: 1545. Total energy = 1273 kcal/mol (1271 without restraints) Performing minimization step: 1546. Total energy = 1273 kcal/mol (1271 without restraints) Performing minimization step: 1547. Total energy = 1273 kcal/mol (1271 without restraints) Performing minimization step: 1548. Total energy = 1273 kcal/mol (1271 without restraints) Performing minimization step: 1549. Total energy = 1273 kcal/mol (1271 without restraints) Performing minimization step: 1550. Total energy = 1272 kcal/mol (1271 without restraints) Performing minimization step: 1551. Total energy = 1272 kcal/mol (1270 without restraints) Performing minimization step: 1552. Total energy = 1272 kcal/mol (1270 without restraints) Performing minimization step: 1553. Total energy = 1272 kcal/mol (1270 without restraints) Performing minimization step: 1554. Total energy = 1272 kcal/mol (1270 without restraints) Performing minimization step: 1555. Total energy = 1272 kcal/mol (1270 without restraints) Performing minimization step: 1556. Total energy = 1272 kcal/mol (1270 without restraints) Performing minimization step: 1557. Total energy = 1271 kcal/mol (1270 without restraints) Performing minimization step: 1558. Total energy = 1271 kcal/mol (1269 without restraints) Performing minimization step: 1559. Total energy = 1271 kcal/mol (1269 without restraints) Performing minimization step: 1560. Total energy = 1271 kcal/mol (1269 without restraints) Performing minimization step: 1561. Total energy = 1271 kcal/mol (1269 without restraints) Performing minimization step: 1562. Total energy = 1271 kcal/mol (1269 without restraints) Performing minimization step: 1563. Total energy = 1271 kcal/mol (1269 without restraints) Performing minimization step: 1564. Total energy = 1271 kcal/mol (1269 without restraints) Performing minimization step: 1565. Total energy = 1270 kcal/mol (1268 without restraints) Performing minimization step: 1566. Total energy = 1270 kcal/mol (1268 without restraints) Performing minimization step: 1567. Total energy = 1270 kcal/mol (1268 without restraints) Performing minimization step: 1568. Total energy = 1270 kcal/mol (1268 without restraints) Performing minimization step: 1569. Total energy = 1270 kcal/mol (1268 without restraints) Performing minimization step: 1570. Total energy = 1270 kcal/mol (1268 without restraints) Performing minimization step: 1571. Total energy = 1270 kcal/mol (1268 without restraints) Performing minimization step: 1572. Total energy = 1269 kcal/mol (1268 without restraints) Performing minimization step: 1573. Total energy = 1269 kcal/mol (1267 without restraints) Performing minimization step: 1574. Total energy = 1269 kcal/mol (1267 without restraints) Performing minimization step: 1575. Total energy = 1269 kcal/mol (1267 without restraints) Performing minimization step: 1576. Total energy = 1269 kcal/mol (1267 without restraints) Performing minimization step: 1577. Total energy = 1269 kcal/mol (1267 without restraints) Performing minimization step: 1578. Total energy = 1269 kcal/mol (1267 without restraints) Performing minimization step: 1579. Total energy = 1269 kcal/mol (1267 without restraints) Performing minimization step: 1580. Total energy = 1268 kcal/mol (1266 without restraints) Performing minimization step: 1581. Total energy = 1268 kcal/mol (1266 without restraints) Performing minimization step: 1582. Total energy = 1268 kcal/mol (1266 without restraints) Performing minimization step: 1583. Total energy = 1268 kcal/mol (1266 without restraints) Performing minimization step: 1584. Total energy = 1268 kcal/mol (1266 without restraints) Performing minimization step: 1585. Total energy = 1268 kcal/mol (1266 without restraints) Performing minimization step: 1586. Total energy = 1268 kcal/mol (1266 without restraints) Performing minimization step: 1587. Total energy = 1267 kcal/mol (1266 without restraints) Performing minimization step: 1588. Total energy = 1267 kcal/mol (1265 without restraints) Performing minimization step: 1589. Total energy = 1267 kcal/mol (1265 without restraints) Performing minimization step: 1590. Total energy = 1267 kcal/mol (1265 without restraints) Performing minimization step: 1591. Total energy = 1267 kcal/mol (1265 without restraints) Performing minimization step: 1592. Total energy = 1267 kcal/mol (1265 without restraints) Performing minimization step: 1593. Total energy = 1267 kcal/mol (1265 without restraints) Performing minimization step: 1594. Total energy = 1267 kcal/mol (1265 without restraints) Performing minimization step: 1595. Total energy = 1266 kcal/mol (1265 without restraints) Performing minimization step: 1596. Total energy = 1266 kcal/mol (1264 without restraints) Performing minimization step: 1597. Total energy = 1266 kcal/mol (1264 without restraints) Performing minimization step: 1598. Total energy = 1266 kcal/mol (1264 without restraints) Performing minimization step: 1599. Total energy = 1266 kcal/mol (1264 without restraints) Performing minimization step: 1600. Total energy = 1266 kcal/mol (1264 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/90a3fe85/tmp/apt_refx/apt_refx.pdb ...Done. Performing minimization step: 1601. Total energy = 1266 kcal/mol (1264 without restraints) Performing minimization step: 1602. Total energy = 1265 kcal/mol (1264 without restraints) Performing minimization step: 1603. Total energy = 1265 kcal/mol (1263 without restraints) Performing minimization step: 1604. Total energy = 1265 kcal/mol (1263 without restraints) Performing minimization step: 1605. Total energy = 1265 kcal/mol (1263 without restraints) Performing minimization step: 1606. Total energy = 1265 kcal/mol (1263 without restraints) Performing minimization step: 1607. Total energy = 1265 kcal/mol (1263 without restraints) Performing minimization step: 1608. Total energy = 1265 kcal/mol (1263 without restraints) Performing minimization step: 1609. Total energy = 1265 kcal/mol (1263 without restraints) Performing minimization step: 1610. Total energy = 1264 kcal/mol (1263 without restraints) Performing minimization step: 1611. Total energy = 1264 kcal/mol (1262 without restraints) Performing minimization step: 1612. Total energy = 1264 kcal/mol (1262 without restraints) Performing minimization step: 1613. Total energy = 1264 kcal/mol (1262 without restraints) Performing minimization step: 1614. Total energy = 1264 kcal/mol (1262 without restraints) Performing minimization step: 1615. Total energy = 1264 kcal/mol (1262 without restraints) Performing minimization step: 1616. Total energy = 1264 kcal/mol (1262 without restraints) Performing minimization step: 1617. Total energy = 1264 kcal/mol (1262 without restraints) Performing minimization step: 1618. Total energy = 1263 kcal/mol (1262 without restraints) Performing minimization step: 1619. Total energy = 1263 kcal/mol (1261 without restraints) Performing minimization step: 1620. Total energy = 1263 kcal/mol (1261 without restraints) Performing minimization step: 1621. Total energy = 1263 kcal/mol (1261 without restraints) Performing minimization step: 1622. Total energy = 1263 kcal/mol (1261 without restraints) Performing minimization step: 1623. Total energy = 1263 kcal/mol (1261 without restraints) Performing minimization step: 1624. Total energy = 1263 kcal/mol (1261 without restraints) Performing minimization step: 1625. Total energy = 1262 kcal/mol (1261 without restraints) Performing minimization step: 1626. Total energy = 1262 kcal/mol (1260 without restraints) Performing minimization step: 1627. Total energy = 1262 kcal/mol (1260 without restraints) Performing minimization step: 1628. Total energy = 1262 kcal/mol (1260 without restraints) Performing minimization step: 1629. Total energy = 1262 kcal/mol (1260 without restraints) Performing minimization step: 1630. Total energy = 1262 kcal/mol (1260 without restraints) Performing minimization step: 1631. Total energy = 1262 kcal/mol (1260 without restraints) Performing minimization step: 1632. Total energy = 1262 kcal/mol (1260 without restraints) Performing minimization step: 1633. Total energy = 1261 kcal/mol (1260 without restraints) Performing minimization step: 1634. Total energy = 1261 kcal/mol (1259 without restraints) Performing minimization step: 1635. Total energy = 1261 kcal/mol (1259 without restraints) Performing minimization step: 1636. Total energy = 1261 kcal/mol (1259 without restraints) Performing minimization step: 1637. Total energy = 1261 kcal/mol (1259 without restraints) Performing minimization step: 1638. Total energy = 1261 kcal/mol (1259 without restraints) Performing minimization step: 1639. Total energy = 1261 kcal/mol (1259 without restraints) Performing minimization step: 1640. Total energy = 1261 kcal/mol (1259 without restraints) Performing minimization step: 1641. Total energy = 1260 kcal/mol (1259 without restraints) Performing minimization step: 1642. Total energy = 1260 kcal/mol (1258 without restraints) Performing minimization step: 1643. Total energy = 1260 kcal/mol (1258 without restraints) Performing minimization step: 1644. Total energy = 1260 kcal/mol (1258 without restraints) Performing minimization step: 1645. Total energy = 1260 kcal/mol (1258 without restraints) Performing minimization step: 1646. Total energy = 1260 kcal/mol (1258 without restraints) Performing minimization step: 1647. Total energy = 1260 kcal/mol (1258 without restraints) Performing minimization step: 1648. Total energy = 1260 kcal/mol (1258 without restraints) Performing minimization step: 1649. Total energy = 1259 kcal/mol (1258 without restraints) Performing minimization step: 1650. Total energy = 1259 kcal/mol (1257 without restraints) Performing minimization step: 1651. Total energy = 1259 kcal/mol (1257 without restraints) Performing minimization step: 1652. Total energy = 1259 kcal/mol (1257 without restraints) Performing minimization step: 1653. Total energy = 1259 kcal/mol (1257 without restraints) Performing minimization step: 1654. Total energy = 1259 kcal/mol (1257 without restraints) Performing minimization step: 1655. Total energy = 1259 kcal/mol (1257 without restraints) Performing minimization step: 1656. Total energy = 1259 kcal/mol (1257 without restraints) Performing minimization step: 1657. Total energy = 1258 kcal/mol (1257 without restraints) Performing minimization step: 1658. Total energy = 1258 kcal/mol (1256 without restraints) Performing minimization step: 1659. Total energy = 1258 kcal/mol (1256 without restraints) Performing minimization step: 1660. Total energy = 1258 kcal/mol (1256 without restraints) Performing minimization step: 1661. Total energy = 1258 kcal/mol (1256 without restraints) Performing minimization step: 1662. Total energy = 1258 kcal/mol (1256 without restraints) Performing minimization step: 1663. Total energy = 1258 kcal/mol (1256 without restraints) Performing minimization step: 1664. Total energy = 1258 kcal/mol (1256 without restraints) Performing minimization step: 1665. Total energy = 1257 kcal/mol (1256 without restraints) Performing minimization step: 1666. Total energy = 1257 kcal/mol (1255 without restraints) Performing minimization step: 1667. Total energy = 1257 kcal/mol (1255 without restraints) Performing minimization step: 1668. Total energy = 1257 kcal/mol (1255 without restraints) Performing minimization step: 1669. Total energy = 1257 kcal/mol (1255 without restraints) Performing minimization step: 1670. Total energy = 1257 kcal/mol (1255 without restraints) Performing minimization step: 1671. Total energy = 1257 kcal/mol (1255 without restraints) Performing minimization step: 1672. Total energy = 1257 kcal/mol (1255 without restraints) Performing minimization step: 1673. Total energy = 1256 kcal/mol (1255 without restraints) Performing minimization step: 1674. Total energy = 1256 kcal/mol (1254 without restraints) Performing minimization step: 1675. Total energy = 1256 kcal/mol (1254 without restraints) Performing minimization step: 1676. Total energy = 1256 kcal/mol (1254 without restraints) Performing minimization step: 1677. Total energy = 1256 kcal/mol (1254 without restraints) Performing minimization step: 1678. Total energy = 1256 kcal/mol (1254 without restraints) Performing minimization step: 1679. Total energy = 1256 kcal/mol (1254 without restraints) Performing minimization step: 1680. Total energy = 1256 kcal/mol (1254 without restraints) Performing minimization step: 1681. Total energy = 1255 kcal/mol (1254 without restraints) Performing minimization step: 1682. Total energy = 1255 kcal/mol (1253 without restraints) Performing minimization step: 1683. Total energy = 1255 kcal/mol (1253 without restraints) Performing minimization step: 1684. Total energy = 1255 kcal/mol (1253 without restraints) Performing minimization step: 1685. Total energy = 1255 kcal/mol (1253 without restraints) Performing minimization step: 1686. Total energy = 1255 kcal/mol (1253 without restraints) Performing minimization step: 1687. Total energy = 1255 kcal/mol (1253 without restraints) Performing minimization step: 1688. Total energy = 1255 kcal/mol (1253 without restraints) Performing minimization step: 1689. Total energy = 1254 kcal/mol (1253 without restraints) Performing minimization step: 1690. Total energy = 1254 kcal/mol (1252 without restraints) Performing minimization step: 1691. Total energy = 1254 kcal/mol (1252 without restraints) Performing minimization step: 1692. Total energy = 1254 kcal/mol (1252 without restraints) Performing minimization step: 1693. Total energy = 1254 kcal/mol (1252 without restraints) Performing minimization step: 1694. Total energy = 1254 kcal/mol (1252 without restraints) Performing minimization step: 1695. Total energy = 1254 kcal/mol (1252 without restraints) Performing minimization step: 1696. Total energy = 1254 kcal/mol (1252 without restraints) Performing minimization step: 1697. Total energy = 1253 kcal/mol (1252 without restraints) Performing minimization step: 1698. Total energy = 1253 kcal/mol (1251 without restraints) Performing minimization step: 1699. Total energy = 1253 kcal/mol (1251 without restraints) Performing minimization step: 1700. Total energy = 1253 kcal/mol (1251 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/90a3fe85/tmp/apt_refx/apt_refx.pdb ...Done. Performing minimization step: 1701. Total energy = 1253 kcal/mol (1251 without restraints) Performing minimization step: 1702. Total energy = 1253 kcal/mol (1251 without restraints) Performing minimization step: 1703. Total energy = 1253 kcal/mol (1251 without restraints) Performing minimization step: 1704. Total energy = 1253 kcal/mol (1251 without restraints) Performing minimization step: 1705. Total energy = 1252 kcal/mol (1251 without restraints) Performing minimization step: 1706. Total energy = 1252 kcal/mol (1251 without restraints) Performing minimization step: 1707. Total energy = 1252 kcal/mol (1250 without restraints) Performing minimization step: 1708. Total energy = 1252 kcal/mol (1250 without restraints) Performing minimization step: 1709. Total energy = 1252 kcal/mol (1250 without restraints) Performing minimization step: 1710. Total energy = 1252 kcal/mol (1250 without restraints) Performing minimization step: 1711. Total energy = 1252 kcal/mol (1250 without restraints) Performing minimization step: 1712. Total energy = 1252 kcal/mol (1250 without restraints) Performing minimization step: 1713. Total energy = 1252 kcal/mol (1250 without restraints) Performing minimization step: 1714. Total energy = 1251 kcal/mol (1250 without restraints) Performing minimization step: 1715. Total energy = 1251 kcal/mol (1249 without restraints) Performing minimization step: 1716. Total energy = 1251 kcal/mol (1249 without restraints) Performing minimization step: 1717. Total energy = 1251 kcal/mol (1249 without restraints) Performing minimization step: 1718. Total energy = 1251 kcal/mol (1249 without restraints) Performing minimization step: 1719. Total energy = 1251 kcal/mol (1249 without restraints) Performing minimization step: 1720. Total energy = 1251 kcal/mol (1249 without restraints) Performing minimization step: 1721. Total energy = 1251 kcal/mol (1249 without restraints) Performing minimization step: 1722. Total energy = 1250 kcal/mol (1249 without restraints) Performing minimization step: 1723. Total energy = 1250 kcal/mol (1248 without restraints) Performing minimization step: 1724. Total energy = 1250 kcal/mol (1248 without restraints) Performing minimization step: 1725. Total energy = 1250 kcal/mol (1248 without restraints) Performing minimization step: 1726. Total energy = 1250 kcal/mol (1248 without restraints) Performing minimization step: 1727. Total energy = 1250 kcal/mol (1248 without restraints) Performing minimization step: 1728. Total energy = 1250 kcal/mol (1248 without restraints) Performing minimization step: 1729. Total energy = 1250 kcal/mol (1248 without restraints) Performing minimization step: 1730. Total energy = 1249 kcal/mol (1248 without restraints) Performing minimization step: 1731. Total energy = 1249 kcal/mol (1248 without restraints) Performing minimization step: 1732. Total energy = 1249 kcal/mol (1247 without restraints) Performing minimization step: 1733. Total energy = 1249 kcal/mol (1247 without restraints) Performing minimization step: 1734. Total energy = 1249 kcal/mol (1247 without restraints) Performing minimization step: 1735. Total energy = 1249 kcal/mol (1247 without restraints) Performing minimization step: 1736. Total energy = 1249 kcal/mol (1247 without restraints) Performing minimization step: 1737. Total energy = 1249 kcal/mol (1247 without restraints) Performing minimization step: 1738. Total energy = 1249 kcal/mol (1247 without restraints) Performing minimization step: 1739. Total energy = 1248 kcal/mol (1247 without restraints) Performing minimization step: 1740. Total energy = 1248 kcal/mol (1246 without restraints) Performing minimization step: 1741. Total energy = 1248 kcal/mol (1246 without restraints) Performing minimization step: 1742. Total energy = 1248 kcal/mol (1246 without restraints) Performing minimization step: 1743. Total energy = 1248 kcal/mol (1246 without restraints) Performing minimization step: 1744. Total energy = 1248 kcal/mol (1246 without restraints) Performing minimization step: 1745. Total energy = 1248 kcal/mol (1246 without restraints) Performing minimization step: 1746. Total energy = 1248 kcal/mol (1246 without restraints) Performing minimization step: 1747. Total energy = 1247 kcal/mol (1246 without restraints) Performing minimization step: 1748. Total energy = 1247 kcal/mol (1245 without restraints) Performing minimization step: 1749. Total energy = 1247 kcal/mol (1245 without restraints) Performing minimization step: 1750. Total energy = 1247 kcal/mol (1245 without restraints) Performing minimization step: 1751. Total energy = 1247 kcal/mol (1245 without restraints) Performing minimization step: 1752. Total energy = 1247 kcal/mol (1245 without restraints) Performing minimization step: 1753. Total energy = 1247 kcal/mol (1245 without restraints) Performing minimization step: 1754. Total energy = 1247 kcal/mol (1245 without restraints) Performing minimization step: 1755. Total energy = 1247 kcal/mol (1245 without restraints) Performing minimization step: 1756. Total energy = 1246 kcal/mol (1245 without restraints) Performing minimization step: 1757. Total energy = 1246 kcal/mol (1244 without restraints) Performing minimization step: 1758. Total energy = 1246 kcal/mol (1244 without restraints) Performing minimization step: 1759. Total energy = 1246 kcal/mol (1244 without restraints) Performing minimization step: 1760. Total energy = 1246 kcal/mol (1244 without restraints) Performing minimization step: 1761. Total energy = 1246 kcal/mol (1244 without restraints) Performing minimization step: 1762. Total energy = 1246 kcal/mol (1244 without restraints) Performing minimization step: 1763. Total energy = 1246 kcal/mol (1244 without restraints) Performing minimization step: 1764. Total energy = 1245 kcal/mol (1244 without restraints) Performing minimization step: 1765. Total energy = 1245 kcal/mol (1244 without restraints) Performing minimization step: 1766. Total energy = 1245 kcal/mol (1243 without restraints) Performing minimization step: 1767. Total energy = 1245 kcal/mol (1243 without restraints) Performing minimization step: 1768. Total energy = 1245 kcal/mol (1243 without restraints) Performing minimization step: 1769. Total energy = 1245 kcal/mol (1243 without restraints) Performing minimization step: 1770. Total energy = 1245 kcal/mol (1243 without restraints) Performing minimization step: 1771. Total energy = 1245 kcal/mol (1243 without restraints) Performing minimization step: 1772. Total energy = 1245 kcal/mol (1243 without restraints) Performing minimization step: 1773. Total energy = 1244 kcal/mol (1243 without restraints) Performing minimization step: 1774. Total energy = 1244 kcal/mol (1242 without restraints) Performing minimization step: 1775. Total energy = 1244 kcal/mol (1242 without restraints) Performing minimization step: 1776. Total energy = 1244 kcal/mol (1242 without restraints) Performing minimization step: 1777. Total energy = 1244 kcal/mol (1242 without restraints) Performing minimization step: 1778. Total energy = 1244 kcal/mol (1242 without restraints) Performing minimization step: 1779. Total energy = 1244 kcal/mol (1242 without restraints) Performing minimization step: 1780. Total energy = 1244 kcal/mol (1242 without restraints) Performing minimization step: 1781. Total energy = 1243 kcal/mol (1242 without restraints) Performing minimization step: 1782. Total energy = 1243 kcal/mol (1242 without restraints) Performing minimization step: 1783. Total energy = 1243 kcal/mol (1241 without restraints) Performing minimization step: 1784. Total energy = 1243 kcal/mol (1241 without restraints) Performing minimization step: 1785. Total energy = 1243 kcal/mol (1241 without restraints) Performing minimization step: 1786. Total energy = 1243 kcal/mol (1241 without restraints) Performing minimization step: 1787. Total energy = 1243 kcal/mol (1241 without restraints) Performing minimization step: 1788. Total energy = 1243 kcal/mol (1241 without restraints) Performing minimization step: 1789. Total energy = 1243 kcal/mol (1241 without restraints) Performing minimization step: 1790. Total energy = 1242 kcal/mol (1241 without restraints) Performing minimization step: 1791. Total energy = 1242 kcal/mol (1241 without restraints) Performing minimization step: 1792. Total energy = 1242 kcal/mol (1240 without restraints) Performing minimization step: 1793. Total energy = 1242 kcal/mol (1240 without restraints) Performing minimization step: 1794. Total energy = 1242 kcal/mol (1240 without restraints) Performing minimization step: 1795. Total energy = 1242 kcal/mol (1240 without restraints) Performing minimization step: 1796. Total energy = 1242 kcal/mol (1240 without restraints) Performing minimization step: 1797. Total energy = 1242 kcal/mol (1240 without restraints) Performing minimization step: 1798. Total energy = 1242 kcal/mol (1240 without restraints) Performing minimization step: 1799. Total energy = 1241 kcal/mol (1240 without restraints) Performing minimization step: 1800. Total energy = 1241 kcal/mol (1239 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/90a3fe85/tmp/apt_refx/apt_refx.pdb ...Done. Performing minimization step: 1801. Total energy = 1241 kcal/mol (1239 without restraints) Performing minimization step: 1802. Total energy = 1241 kcal/mol (1239 without restraints) Performing minimization step: 1803. Total energy = 1241 kcal/mol (1239 without restraints) Performing minimization step: 1804. Total energy = 1241 kcal/mol (1239 without restraints) Performing minimization step: 1805. Total energy = 1241 kcal/mol (1239 without restraints) Performing minimization step: 1806. Total energy = 1241 kcal/mol (1239 without restraints) Performing minimization step: 1807. Total energy = 1240 kcal/mol (1239 without restraints) Performing minimization step: 1808. Total energy = 1240 kcal/mol (1239 without restraints) Performing minimization step: 1809. Total energy = 1240 kcal/mol (1238 without restraints) Performing minimization step: 1810. Total energy = 1240 kcal/mol (1238 without restraints) Performing minimization step: 1811. Total energy = 1240 kcal/mol (1238 without restraints) Performing minimization step: 1812. Total energy = 1240 kcal/mol (1238 without restraints) Performing minimization step: 1813. Total energy = 1240 kcal/mol (1238 without restraints) Performing minimization step: 1814. Total energy = 1240 kcal/mol (1238 without restraints) Performing minimization step: 1815. Total energy = 1240 kcal/mol (1238 without restraints) Performing minimization step: 1816. Total energy = 1239 kcal/mol (1238 without restraints) Performing minimization step: 1817. Total energy = 1239 kcal/mol (1238 without restraints) Performing minimization step: 1818. Total energy = 1239 kcal/mol (1237 without restraints) Performing minimization step: 1819. Total energy = 1239 kcal/mol (1237 without restraints) Performing minimization step: 1820. Total energy = 1239 kcal/mol (1237 without restraints) Performing minimization step: 1821. Total energy = 1239 kcal/mol (1237 without restraints) Performing minimization step: 1822. Total energy = 1239 kcal/mol (1237 without restraints) Performing minimization step: 1823. Total energy = 1239 kcal/mol (1237 without restraints) Performing minimization step: 1824. Total energy = 1239 kcal/mol (1237 without restraints) Performing minimization step: 1825. Total energy = 1238 kcal/mol (1237 without restraints) Performing minimization step: 1826. Total energy = 1238 kcal/mol (1237 without restraints) Performing minimization step: 1827. Total energy = 1238 kcal/mol (1236 without restraints) Performing minimization step: 1828. Total energy = 1238 kcal/mol (1236 without restraints) Performing minimization step: 1829. Total energy = 1238 kcal/mol (1236 without restraints) Performing minimization step: 1830. Total energy = 1238 kcal/mol (1236 without restraints) Performing minimization step: 1831. Total energy = 1238 kcal/mol (1236 without restraints) Performing minimization step: 1832. Total energy = 1238 kcal/mol (1236 without restraints) Performing minimization step: 1833. Total energy = 1238 kcal/mol (1236 without restraints) Performing minimization step: 1834. Total energy = 1237 kcal/mol (1236 without restraints) Performing minimization step: 1835. Total energy = 1237 kcal/mol (1236 without restraints) Performing minimization step: 1836. Total energy = 1237 kcal/mol (1235 without restraints) Performing minimization step: 1837. Total energy = 1237 kcal/mol (1235 without restraints) Performing minimization step: 1838. Total energy = 1237 kcal/mol (1235 without restraints) Performing minimization step: 1839. Total energy = 1237 kcal/mol (1235 without restraints) Performing minimization step: 1840. Total energy = 1237 kcal/mol (1235 without restraints) Performing minimization step: 1841. Total energy = 1237 kcal/mol (1235 without restraints) Performing minimization step: 1842. Total energy = 1237 kcal/mol (1235 without restraints) Performing minimization step: 1843. Total energy = 1236 kcal/mol (1235 without restraints) Performing minimization step: 1844. Total energy = 1236 kcal/mol (1235 without restraints) Performing minimization step: 1845. Total energy = 1236 kcal/mol (1234 without restraints) Performing minimization step: 1846. Total energy = 1236 kcal/mol (1234 without restraints) Performing minimization step: 1847. Total energy = 1236 kcal/mol (1234 without restraints) Performing minimization step: 1848. Total energy = 1236 kcal/mol (1234 without restraints) Performing minimization step: 1849. Total energy = 1236 kcal/mol (1234 without restraints) Performing minimization step: 1850. Total energy = 1236 kcal/mol (1234 without restraints) Performing minimization step: 1851. Total energy = 1236 kcal/mol (1234 without restraints) Performing minimization step: 1852. Total energy = 1235 kcal/mol (1234 without restraints) Performing minimization step: 1853. Total energy = 1235 kcal/mol (1234 without restraints) Performing minimization step: 1854. Total energy = 1235 kcal/mol (1233 without restraints) Performing minimization step: 1855. Total energy = 1235 kcal/mol (1233 without restraints) Performing minimization step: 1856. Total energy = 1235 kcal/mol (1233 without restraints) Performing minimization step: 1857. Total energy = 1235 kcal/mol (1233 without restraints) Performing minimization step: 1858. Total energy = 1235 kcal/mol (1233 without restraints) Performing minimization step: 1859. Total energy = 1235 kcal/mol (1233 without restraints) Performing minimization step: 1860. Total energy = 1235 kcal/mol (1233 without restraints) Performing minimization step: 1861. Total energy = 1234 kcal/mol (1233 without restraints) Performing minimization step: 1862. Total energy = 1234 kcal/mol (1233 without restraints) Performing minimization step: 1863. Total energy = 1234 kcal/mol (1232 without restraints) Performing minimization step: 1864. Total energy = 1234 kcal/mol (1232 without restraints) Performing minimization step: 1865. Total energy = 1234 kcal/mol (1232 without restraints) Performing minimization step: 1866. Total energy = 1234 kcal/mol (1232 without restraints) Performing minimization step: 1867. Total energy = 1234 kcal/mol (1232 without restraints) Performing minimization step: 1868. Total energy = 1234 kcal/mol (1232 without restraints) Performing minimization step: 1869. Total energy = 1234 kcal/mol (1232 without restraints) Performing minimization step: 1870. Total energy = 1233 kcal/mol (1232 without restraints) Performing minimization step: 1871. Total energy = 1233 kcal/mol (1232 without restraints) Performing minimization step: 1872. Total energy = 1233 kcal/mol (1231 without restraints) Performing minimization step: 1873. Total energy = 1233 kcal/mol (1231 without restraints) Performing minimization step: 1874. Total energy = 1233 kcal/mol (1231 without restraints) Performing minimization step: 1875. Total energy = 1233 kcal/mol (1231 without restraints) Performing minimization step: 1876. Total energy = 1233 kcal/mol (1231 without restraints) Performing minimization step: 1877. Total energy = 1233 kcal/mol (1231 without restraints) Performing minimization step: 1878. Total energy = 1233 kcal/mol (1231 without restraints) Performing minimization step: 1879. Total energy = 1233 kcal/mol (1231 without restraints) Performing minimization step: 1880. Total energy = 1232 kcal/mol (1231 without restraints) Performing minimization step: 1881. Total energy = 1232 kcal/mol (1231 without restraints) Performing minimization step: 1882. Total energy = 1232 kcal/mol (1230 without restraints) Performing minimization step: 1883. Total energy = 1232 kcal/mol (1230 without restraints) Performing minimization step: 1884. Total energy = 1232 kcal/mol (1230 without restraints) Performing minimization step: 1885. Total energy = 1232 kcal/mol (1230 without restraints) Performing minimization step: 1886. Total energy = 1232 kcal/mol (1230 without restraints) Performing minimization step: 1887. Total energy = 1232 kcal/mol (1230 without restraints) Performing minimization step: 1888. Total energy = 1232 kcal/mol (1230 without restraints) Performing minimization step: 1889. Total energy = 1231 kcal/mol (1230 without restraints) Performing minimization step: 1890. Total energy = 1231 kcal/mol (1230 without restraints) Performing minimization step: 1891. Total energy = 1231 kcal/mol (1229 without restraints) Performing minimization step: 1892. Total energy = 1231 kcal/mol (1229 without restraints) Performing minimization step: 1893. Total energy = 1231 kcal/mol (1229 without restraints) Performing minimization step: 1894. Total energy = 1231 kcal/mol (1229 without restraints) Performing minimization step: 1895. Total energy = 1231 kcal/mol (1229 without restraints) Performing minimization step: 1896. Total energy = 1231 kcal/mol (1229 without restraints) Performing minimization step: 1897. Total energy = 1231 kcal/mol (1229 without restraints) Performing minimization step: 1898. Total energy = 1230 kcal/mol (1229 without restraints) Performing minimization step: 1899. Total energy = 1230 kcal/mol (1229 without restraints) Performing minimization step: 1900. Total energy = 1230 kcal/mol (1228 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/90a3fe85/tmp/apt_refx/apt_refx.pdb ...Done. Performing minimization step: 1901. Total energy = 1230 kcal/mol (1228 without restraints) Performing minimization step: 1902. Total energy = 1230 kcal/mol (1228 without restraints) Performing minimization step: 1903. Total energy = 1230 kcal/mol (1228 without restraints) Performing minimization step: 1904. Total energy = 1230 kcal/mol (1228 without restraints) Performing minimization step: 1905. Total energy = 1230 kcal/mol (1228 without restraints) Performing minimization step: 1906. Total energy = 1230 kcal/mol (1228 without restraints) Performing minimization step: 1907. Total energy = 1230 kcal/mol (1228 without restraints) Performing minimization step: 1908. Total energy = 1229 kcal/mol (1228 without restraints) Performing minimization step: 1909. Total energy = 1229 kcal/mol (1228 without restraints) Performing minimization step: 1910. Total energy = 1229 kcal/mol (1227 without restraints) Performing minimization step: 1911. Total energy = 1229 kcal/mol (1227 without restraints) Performing minimization step: 1912. Total energy = 1229 kcal/mol (1227 without restraints) Performing minimization step: 1913. Total energy = 1229 kcal/mol (1227 without restraints) Performing minimization step: 1914. Total energy = 1229 kcal/mol (1227 without restraints) Performing minimization step: 1915. Total energy = 1229 kcal/mol (1227 without restraints) Performing minimization step: 1916. Total energy = 1229 kcal/mol (1227 without restraints) Performing minimization step: 1917. Total energy = 1228 kcal/mol (1227 without restraints) Performing minimization step: 1918. Total energy = 1228 kcal/mol (1227 without restraints) Performing minimization step: 1919. Total energy = 1228 kcal/mol (1226 without restraints) Performing minimization step: 1920. Total energy = 1228 kcal/mol (1226 without restraints) Performing minimization step: 1921. Total energy = 1228 kcal/mol (1226 without restraints) Performing minimization step: 1922. Total energy = 1228 kcal/mol (1226 without restraints) Performing minimization step: 1923. Total energy = 1228 kcal/mol (1226 without restraints) Performing minimization step: 1924. Total energy = 1228 kcal/mol (1226 without restraints) Performing minimization step: 1925. Total energy = 1228 kcal/mol (1226 without restraints) Performing minimization step: 1926. Total energy = 1227 kcal/mol (1226 without restraints) Performing minimization step: 1927. Total energy = 1227 kcal/mol (1226 without restraints) Performing minimization step: 1928. Total energy = 1227 kcal/mol (1225 without restraints) Performing minimization step: 1929. Total energy = 1227 kcal/mol (1225 without restraints) Performing minimization step: 1930. Total energy = 1227 kcal/mol (1225 without restraints) Performing minimization step: 1931. Total energy = 1227 kcal/mol (1225 without restraints) Performing minimization step: 1932. Total energy = 1227 kcal/mol (1225 without restraints) Performing minimization step: 1933. Total energy = 1227 kcal/mol (1225 without restraints) Performing minimization step: 1934. Total energy = 1227 kcal/mol (1225 without restraints) Performing minimization step: 1935. Total energy = 1227 kcal/mol (1225 without restraints) Performing minimization step: 1936. Total energy = 1226 kcal/mol (1225 without restraints) Performing minimization step: 1937. Total energy = 1226 kcal/mol (1225 without restraints) Performing minimization step: 1938. Total energy = 1226 kcal/mol (1224 without restraints) Performing minimization step: 1939. Total energy = 1226 kcal/mol (1224 without restraints) Performing minimization step: 1940. Total energy = 1226 kcal/mol (1224 without restraints) Performing minimization step: 1941. Total energy = 1226 kcal/mol (1224 without restraints) Performing minimization step: 1942. Total energy = 1226 kcal/mol (1224 without restraints) Performing minimization step: 1943. Total energy = 1226 kcal/mol (1224 without restraints) Performing minimization step: 1944. Total energy = 1226 kcal/mol (1224 without restraints) Performing minimization step: 1945. Total energy = 1226 kcal/mol (1224 without restraints) Performing minimization step: 1946. Total energy = 1225 kcal/mol (1224 without restraints) Performing minimization step: 1947. Total energy = 1225 kcal/mol (1224 without restraints) Performing minimization step: 1948. Total energy = 1225 kcal/mol (1223 without restraints) Performing minimization step: 1949. Total energy = 1225 kcal/mol (1223 without restraints) Performing minimization step: 1950. Total energy = 1225 kcal/mol (1223 without restraints) Performing minimization step: 1951. Total energy = 1225 kcal/mol (1223 without restraints) Performing minimization step: 1952. Total energy = 1225 kcal/mol (1223 without restraints) Performing minimization step: 1953. Total energy = 1225 kcal/mol (1223 without restraints) Performing minimization step: 1954. Total energy = 1225 kcal/mol (1223 without restraints) Performing minimization step: 1955. Total energy = 1224 kcal/mol (1223 without restraints) Performing minimization step: 1956. Total energy = 1224 kcal/mol (1223 without restraints) Performing minimization step: 1957. Total energy = 1224 kcal/mol (1222 without restraints) Performing minimization step: 1958. Total energy = 1224 kcal/mol (1222 without restraints) Performing minimization step: 1959. Total energy = 1224 kcal/mol (1222 without restraints) Performing minimization step: 1960. Total energy = 1224 kcal/mol (1222 without restraints) Performing minimization step: 1961. Total energy = 1224 kcal/mol (1222 without restraints) Performing minimization step: 1962. Total energy = 1224 kcal/mol (1222 without restraints) Performing minimization step: 1963. Total energy = 1224 kcal/mol (1222 without restraints) Performing minimization step: 1964. Total energy = 1224 kcal/mol (1222 without restraints) Performing minimization step: 1965. Total energy = 1223 kcal/mol (1222 without restraints) Performing minimization step: 1966. Total energy = 1223 kcal/mol (1222 without restraints) Performing minimization step: 1967. Total energy = 1223 kcal/mol (1221 without restraints) Performing minimization step: 1968. Total energy = 1223 kcal/mol (1221 without restraints) Performing minimization step: 1969. Total energy = 1223 kcal/mol (1221 without restraints) Performing minimization step: 1970. Total energy = 1223 kcal/mol (1221 without restraints) Performing minimization step: 1971. Total energy = 1223 kcal/mol (1221 without restraints) Performing minimization step: 1972. Total energy = 1223 kcal/mol (1221 without restraints) Performing minimization step: 1973. Total energy = 1223 kcal/mol (1221 without restraints) Performing minimization step: 1974. Total energy = 1223 kcal/mol (1221 without restraints) Performing minimization step: 1975. Total energy = 1222 kcal/mol (1221 without restraints) Performing minimization step: 1976. Total energy = 1222 kcal/mol (1221 without restraints) Performing minimization step: 1977. Total energy = 1222 kcal/mol (1220 without restraints) Performing minimization step: 1978. Total energy = 1222 kcal/mol (1220 without restraints) Performing minimization step: 1979. Total energy = 1222 kcal/mol (1220 without restraints) Performing minimization step: 1980. Total energy = 1222 kcal/mol (1220 without restraints) Performing minimization step: 1981. Total energy = 1222 kcal/mol (1220 without restraints) Performing minimization step: 1982. Total energy = 1222 kcal/mol (1220 without restraints) Performing minimization step: 1983. Total energy = 1222 kcal/mol (1220 without restraints) Performing minimization step: 1984. Total energy = 1221 kcal/mol (1220 without restraints) Performing minimization step: 1985. Total energy = 1221 kcal/mol (1220 without restraints) Performing minimization step: 1986. Total energy = 1221 kcal/mol (1220 without restraints) Performing minimization step: 1987. Total energy = 1221 kcal/mol (1219 without restraints) Performing minimization step: 1988. Total energy = 1221 kcal/mol (1219 without restraints) Performing minimization step: 1989. Total energy = 1221 kcal/mol (1219 without restraints) Performing minimization step: 1990. Total energy = 1221 kcal/mol (1219 without restraints) Performing minimization step: 1991. Total energy = 1221 kcal/mol (1219 without restraints) Performing minimization step: 1992. Total energy = 1221 kcal/mol (1219 without restraints) Performing minimization step: 1993. Total energy = 1221 kcal/mol (1219 without restraints) Performing minimization step: 1994. Total energy = 1220 kcal/mol (1219 without restraints) Performing minimization step: 1995. Total energy = 1220 kcal/mol (1219 without restraints) Performing minimization step: 1996. Total energy = 1220 kcal/mol (1219 without restraints) Performing minimization step: 1997. Total energy = 1220 kcal/mol (1218 without restraints) Performing minimization step: 1998. Total energy = 1220 kcal/mol (1218 without restraints) Performing minimization step: 1999. Total energy = 1220 kcal/mol (1218 without restraints) Performing minimization step: 2000. Total energy = 1220 kcal/mol (1218 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/90a3fe85/tmp/apt_refx/apt_refx.pdb ...Done. Performing minimization step: 2001. Total energy = 1220 kcal/mol (1218 without restraints) Performing minimization step: 2002. Total energy = 1220 kcal/mol (1218 without restraints) Performing minimization step: 2003. Total energy = 1220 kcal/mol (1218 without restraints) Performing minimization step: 2004. Total energy = 1219 kcal/mol (1218 without restraints) Performing minimization step: 2005. Total energy = 1219 kcal/mol (1218 without restraints) Performing minimization step: 2006. Total energy = 1219 kcal/mol (1218 without restraints) Performing minimization step: 2007. Total energy = 1219 kcal/mol (1217 without restraints) Performing minimization step: 2008. Total energy = 1219 kcal/mol (1217 without restraints) Performing minimization step: 2009. Total energy = 1219 kcal/mol (1217 without restraints) Performing minimization step: 2010. Total energy = 1219 kcal/mol (1217 without restraints) Performing minimization step: 2011. Total energy = 1219 kcal/mol (1217 without restraints) Performing minimization step: 2012. Total energy = 1219 kcal/mol (1217 without restraints) Performing minimization step: 2013. Total energy = 1219 kcal/mol (1217 without restraints) Performing minimization step: 2014. Total energy = 1218 kcal/mol (1217 without restraints) Performing minimization step: 2015. Total energy = 1218 kcal/mol (1217 without restraints) Performing minimization step: 2016. Total energy = 1218 kcal/mol (1217 without restraints) Performing minimization step: 2017. Total energy = 1218 kcal/mol (1216 without restraints) Performing minimization step: 2018. Total energy = 1218 kcal/mol (1216 without restraints) Performing minimization step: 2019. Total energy = 1218 kcal/mol (1216 without restraints) Performing minimization step: 2020. Total energy = 1218 kcal/mol (1216 without restraints) Performing minimization step: 2021. Total energy = 1218 kcal/mol (1216 without restraints) Performing minimization step: 2022. Total energy = 1218 kcal/mol (1216 without restraints) Performing minimization step: 2023. Total energy = 1218 kcal/mol (1216 without restraints) Performing minimization step: 2024. Total energy = 1217 kcal/mol (1216 without restraints) Performing minimization step: 2025. Total energy = 1217 kcal/mol (1216 without restraints) Performing minimization step: 2026. Total energy = 1217 kcal/mol (1216 without restraints) Performing minimization step: 2027. Total energy = 1217 kcal/mol (1215 without restraints) Performing minimization step: 2028. Total energy = 1217 kcal/mol (1215 without restraints) Performing minimization step: 2029. Total energy = 1217 kcal/mol (1215 without restraints) Performing minimization step: 2030. Total energy = 1217 kcal/mol (1215 without restraints) Performing minimization step: 2031. Total energy = 1217 kcal/mol (1215 without restraints) Performing minimization step: 2032. Total energy = 1217 kcal/mol (1215 without restraints) Performing minimization step: 2033. Total energy = 1217 kcal/mol (1215 without restraints) Performing minimization step: 2034. Total energy = 1217 kcal/mol (1215 without restraints) Performing minimization step: 2035. Total energy = 1216 kcal/mol (1215 without restraints) Performing minimization step: 2036. Total energy = 1216 kcal/mol (1215 without restraints) Performing minimization step: 2037. Total energy = 1216 kcal/mol (1214 without restraints) Performing minimization step: 2038. Total energy = 1216 kcal/mol (1214 without restraints) Performing minimization step: 2039. Total energy = 1216 kcal/mol (1214 without restraints) Performing minimization step: 2040. Total energy = 1216 kcal/mol (1214 without restraints) Performing minimization step: 2041. Total energy = 1216 kcal/mol (1214 without restraints) Performing minimization step: 2042. Total energy = 1216 kcal/mol (1214 without restraints) Performing minimization step: 2043. Total energy = 1216 kcal/mol (1214 without restraints) Performing minimization step: 2044. Total energy = 1216 kcal/mol (1214 without restraints) Performing minimization step: 2045. Total energy = 1215 kcal/mol (1214 without restraints) Performing minimization step: 2046. Total energy = 1215 kcal/mol (1214 without restraints) Performing minimization step: 2047. Total energy = 1215 kcal/mol (1213 without restraints) Performing minimization step: 2048. Total energy = 1215 kcal/mol (1213 without restraints) Performing minimization step: 2049. Total energy = 1215 kcal/mol (1213 without restraints) Performing minimization step: 2050. Total energy = 1215 kcal/mol (1213 without restraints) Performing minimization step: 2051. Total energy = 1215 kcal/mol (1213 without restraints) Performing minimization step: 2052. Total energy = 1215 kcal/mol (1213 without restraints) Performing minimization step: 2053. Total energy = 1215 kcal/mol (1213 without restraints) Performing minimization step: 2054. Total energy = 1215 kcal/mol (1213 without restraints) Performing minimization step: 2055. Total energy = 1214 kcal/mol (1213 without restraints) Performing minimization step: 2056. Total energy = 1214 kcal/mol (1213 without restraints) Performing minimization step: 2057. Total energy = 1214 kcal/mol (1212 without restraints) Performing minimization step: 2058. Total energy = 1214 kcal/mol (1212 without restraints) Performing minimization step: 2059. Total energy = 1214 kcal/mol (1212 without restraints) Performing minimization step: 2060. Total energy = 1214 kcal/mol (1212 without restraints) Performing minimization step: 2061. Total energy = 1214 kcal/mol (1212 without restraints) Performing minimization step: 2062. Total energy = 1214 kcal/mol (1212 without restraints) Performing minimization step: 2063. Total energy = 1214 kcal/mol (1212 without restraints) Performing minimization step: 2064. Total energy = 1214 kcal/mol (1212 without restraints) Performing minimization step: 2065. Total energy = 1213 kcal/mol (1212 without restraints) Performing minimization step: 2066. Total energy = 1213 kcal/mol (1212 without restraints) Performing minimization step: 2067. Total energy = 1213 kcal/mol (1212 without restraints) Performing minimization step: 2068. Total energy = 1213 kcal/mol (1211 without restraints) Performing minimization step: 2069. Total energy = 1213 kcal/mol (1211 without restraints) Performing minimization step: 2070. Total energy = 1213 kcal/mol (1211 without restraints) Performing minimization step: 2071. Total energy = 1213 kcal/mol (1211 without restraints) Performing minimization step: 2072. Total energy = 1213 kcal/mol (1211 without restraints) Performing minimization step: 2073. Total energy = 1213 kcal/mol (1211 without restraints) Performing minimization step: 2074. Total energy = 1213 kcal/mol (1211 without restraints) Performing minimization step: 2075. Total energy = 1213 kcal/mol (1211 without restraints) Performing minimization step: 2076. Total energy = 1212 kcal/mol (1211 without restraints) Performing minimization step: 2077. Total energy = 1212 kcal/mol (1211 without restraints) Performing minimization step: 2078. Total energy = 1212 kcal/mol (1210 without restraints) Performing minimization step: 2079. Total energy = 1212 kcal/mol (1210 without restraints) Performing minimization step: 2080. Total energy = 1212 kcal/mol (1210 without restraints) Performing minimization step: 2081. Total energy = 1212 kcal/mol (1210 without restraints) Performing minimization step: 2082. Total energy = 1212 kcal/mol (1210 without restraints) Performing minimization step: 2083. Total energy = 1212 kcal/mol (1210 without restraints) Performing minimization step: 2084. Total energy = 1212 kcal/mol (1210 without restraints) Performing minimization step: 2085. Total energy = 1212 kcal/mol (1210 without restraints) Performing minimization step: 2086. Total energy = 1211 kcal/mol (1210 without restraints) Performing minimization step: 2087. Total energy = 1211 kcal/mol (1210 without restraints) Performing minimization step: 2088. Total energy = 1211 kcal/mol (1210 without restraints) Performing minimization step: 2089. Total energy = 1211 kcal/mol (1209 without restraints) Performing minimization step: 2090. Total energy = 1211 kcal/mol (1209 without restraints) Performing minimization step: 2091. Total energy = 1211 kcal/mol (1209 without restraints) Performing minimization step: 2092. Total energy = 1211 kcal/mol (1209 without restraints) Performing minimization step: 2093. Total energy = 1211 kcal/mol (1209 without restraints) Performing minimization step: 2094. Total energy = 1211 kcal/mol (1209 without restraints) Performing minimization step: 2095. Total energy = 1211 kcal/mol (1209 without restraints) Performing minimization step: 2096. Total energy = 1211 kcal/mol (1209 without restraints) Performing minimization step: 2097. Total energy = 1210 kcal/mol (1209 without restraints) Performing minimization step: 2098. Total energy = 1210 kcal/mol (1209 without restraints) Performing minimization step: 2099. Total energy = 1210 kcal/mol (1208 without restraints) Performing minimization step: 2100. Total energy = 1210 kcal/mol (1208 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/90a3fe85/tmp/apt_refx/apt_refx.pdb ...Done. Performing minimization step: 2101. Total energy = 1210 kcal/mol (1208 without restraints) Performing minimization step: 2102. Total energy = 1210 kcal/mol (1208 without restraints) Performing minimization step: 2103. Total energy = 1210 kcal/mol (1208 without restraints) Performing minimization step: 2104. Total energy = 1210 kcal/mol (1208 without restraints) Performing minimization step: 2105. Total energy = 1210 kcal/mol (1208 without restraints) Performing minimization step: 2106. Total energy = 1210 kcal/mol (1208 without restraints) Performing minimization step: 2107. Total energy = 1209 kcal/mol (1208 without restraints) Performing minimization step: 2108. Total energy = 1209 kcal/mol (1208 without restraints) Performing minimization step: 2109. Total energy = 1209 kcal/mol (1208 without restraints) Performing minimization step: 2110. Total energy = 1209 kcal/mol (1207 without restraints) Performing minimization step: 2111. Total energy = 1209 kcal/mol (1207 without restraints) Performing minimization step: 2112. Total energy = 1209 kcal/mol (1207 without restraints) Performing minimization step: 2113. Total energy = 1209 kcal/mol (1207 without restraints) Performing minimization step: 2114. Total energy = 1209 kcal/mol (1207 without restraints) Performing minimization step: 2115. Total energy = 1209 kcal/mol (1207 without restraints) Performing minimization step: 2116. Total energy = 1209 kcal/mol (1207 without restraints) Performing minimization step: 2117. Total energy = 1209 kcal/mol (1207 without restraints) Performing minimization step: 2118. Total energy = 1208 kcal/mol (1207 without restraints) Performing minimization step: 2119. Total energy = 1208 kcal/mol (1207 without restraints) Performing minimization step: 2120. Total energy = 1208 kcal/mol (1206 without restraints) Performing minimization step: 2121. Total energy = 1208 kcal/mol (1206 without restraints) Performing minimization step: 2122. Total energy = 1208 kcal/mol (1206 without restraints) Performing minimization step: 2123. Total energy = 1208 kcal/mol (1206 without restraints) Performing minimization step: 2124. Total energy = 1208 kcal/mol (1206 without restraints) Performing minimization step: 2125. Total energy = 1208 kcal/mol (1206 without restraints) Performing minimization step: 2126. Total energy = 1208 kcal/mol (1206 without restraints) Performing minimization step: 2127. Total energy = 1208 kcal/mol (1206 without restraints) Performing minimization step: 2128. Total energy = 1208 kcal/mol (1206 without restraints) Performing minimization step: 2129. Total energy = 1207 kcal/mol (1206 without restraints) Performing minimization step: 2130. Total energy = 1207 kcal/mol (1206 without restraints) Performing minimization step: 2131. Total energy = 1207 kcal/mol (1205 without restraints) Performing minimization step: 2132. Total energy = 1207 kcal/mol (1205 without restraints) Performing minimization step: 2133. Total energy = 1207 kcal/mol (1205 without restraints) Performing minimization step: 2134. Total energy = 1207 kcal/mol (1205 without restraints) Performing minimization step: 2135. Total energy = 1207 kcal/mol (1205 without restraints) Performing minimization step: 2136. Total energy = 1207 kcal/mol (1205 without restraints) Performing minimization step: 2137. Total energy = 1207 kcal/mol (1205 without restraints) Performing minimization step: 2138. Total energy = 1207 kcal/mol (1205 without restraints) Performing minimization step: 2139. Total energy = 1206 kcal/mol (1205 without restraints) Performing minimization step: 2140. Total energy = 1206 kcal/mol (1205 without restraints) Performing minimization step: 2141. Total energy = 1206 kcal/mol (1205 without restraints) Performing minimization step: 2142. Total energy = 1206 kcal/mol (1204 without restraints) Performing minimization step: 2143. Total energy = 1206 kcal/mol (1204 without restraints) Performing minimization step: 2144. Total energy = 1206 kcal/mol (1204 without restraints) Performing minimization step: 2145. Total energy = 1206 kcal/mol (1204 without restraints) Performing minimization step: 2146. Total energy = 1206 kcal/mol (1204 without restraints) Performing minimization step: 2147. Total energy = 1206 kcal/mol (1204 without restraints) Performing minimization step: 2148. Total energy = 1206 kcal/mol (1204 without restraints) Performing minimization step: 2149. Total energy = 1206 kcal/mol (1204 without restraints) Performing minimization step: 2150. Total energy = 1205 kcal/mol (1204 without restraints) Performing minimization step: 2151. Total energy = 1205 kcal/mol (1204 without restraints) Performing minimization step: 2152. Total energy = 1205 kcal/mol (1204 without restraints) Performing minimization step: 2153. Total energy = 1205 kcal/mol (1203 without restraints) Performing minimization step: 2154. Total energy = 1205 kcal/mol (1203 without restraints) Performing minimization step: 2155. Total energy = 1205 kcal/mol (1203 without restraints) Performing minimization step: 2156. Total energy = 1205 kcal/mol (1203 without restraints) Performing minimization step: 2157. Total energy = 1205 kcal/mol (1203 without restraints) Performing minimization step: 2158. Total energy = 1205 kcal/mol (1203 without restraints) Performing minimization step: 2159. Total energy = 1205 kcal/mol (1203 without restraints) Performing minimization step: 2160. Total energy = 1205 kcal/mol (1203 without restraints) Performing minimization step: 2161. Total energy = 1204 kcal/mol (1203 without restraints) Performing minimization step: 2162. Total energy = 1204 kcal/mol (1203 without restraints) Performing minimization step: 2163. Total energy = 1204 kcal/mol (1203 without restraints) Performing minimization step: 2164. Total energy = 1204 kcal/mol (1202 without restraints) Performing minimization step: 2165. Total energy = 1204 kcal/mol (1202 without restraints) Performing minimization step: 2166. Total energy = 1204 kcal/mol (1202 without restraints) Performing minimization step: 2167. Total energy = 1204 kcal/mol (1202 without restraints) Performing minimization step: 2168. Total energy = 1204 kcal/mol (1202 without restraints) Performing minimization step: 2169. Total energy = 1204 kcal/mol (1202 without restraints) Performing minimization step: 2170. Total energy = 1204 kcal/mol (1202 without restraints) Performing minimization step: 2171. Total energy = 1204 kcal/mol (1202 without restraints) Performing minimization step: 2172. Total energy = 1203 kcal/mol (1202 without restraints) Performing minimization step: 2173. Total energy = 1203 kcal/mol (1202 without restraints) Performing minimization step: 2174. Total energy = 1203 kcal/mol (1202 without restraints) Performing minimization step: 2175. Total energy = 1203 kcal/mol (1201 without restraints) Performing minimization step: 2176. Total energy = 1203 kcal/mol (1201 without restraints) Performing minimization step: 2177. Total energy = 1203 kcal/mol (1201 without restraints) Performing minimization step: 2178. Total energy = 1203 kcal/mol (1201 without restraints) Performing minimization step: 2179. Total energy = 1203 kcal/mol (1201 without restraints) Performing minimization step: 2180. Total energy = 1203 kcal/mol (1201 without restraints) Performing minimization step: 2181. Total energy = 1203 kcal/mol (1201 without restraints) Performing minimization step: 2182. Total energy = 1203 kcal/mol (1201 without restraints) Performing minimization step: 2183. Total energy = 1202 kcal/mol (1201 without restraints) Performing minimization step: 2184. Total energy = 1202 kcal/mol (1201 without restraints) Performing minimization step: 2185. Total energy = 1202 kcal/mol (1201 without restraints) Performing minimization step: 2186. Total energy = 1202 kcal/mol (1200 without restraints) Performing minimization step: 2187. Total energy = 1202 kcal/mol (1200 without restraints) Performing minimization step: 2188. Total energy = 1202 kcal/mol (1200 without restraints) Performing minimization step: 2189. Total energy = 1202 kcal/mol (1200 without restraints) Performing minimization step: 2190. Total energy = 1202 kcal/mol (1200 without restraints) Performing minimization step: 2191. Total energy = 1202 kcal/mol (1200 without restraints) Performing minimization step: 2192. Total energy = 1202 kcal/mol (1200 without restraints) Performing minimization step: 2193. Total energy = 1202 kcal/mol (1200 without restraints) Performing minimization step: 2194. Total energy = 1201 kcal/mol (1200 without restraints) Performing minimization step: 2195. Total energy = 1201 kcal/mol (1200 without restraints) Performing minimization step: 2196. Total energy = 1201 kcal/mol (1200 without restraints) Performing minimization step: 2197. Total energy = 1201 kcal/mol (1199 without restraints) Performing minimization step: 2198. Total energy = 1201 kcal/mol (1199 without restraints) Performing minimization step: 2199. Total energy = 1201 kcal/mol (1199 without restraints) Performing minimization step: 2200. Total energy = 1201 kcal/mol (1199 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/90a3fe85/tmp/apt_refx/apt_refx.pdb ...Done. Performing minimization step: 2201. Total energy = 1201 kcal/mol (1199 without restraints) Performing minimization step: 2202. Total energy = 1201 kcal/mol (1199 without restraints) Performing minimization step: 2203. Total energy = 1201 kcal/mol (1199 without restraints) Performing minimization step: 2204. Total energy = 1201 kcal/mol (1199 without restraints) Performing minimization step: 2205. Total energy = 1201 kcal/mol (1199 without restraints) Performing minimization step: 2206. Total energy = 1200 kcal/mol (1199 without restraints) Performing minimization step: 2207. Total energy = 1200 kcal/mol (1199 without restraints) Performing minimization step: 2208. Total energy = 1200 kcal/mol (1198 without restraints) Performing minimization step: 2209. Total energy = 1200 kcal/mol (1198 without restraints) Performing minimization step: 2210. Total energy = 1200 kcal/mol (1198 without restraints) Performing minimization step: 2211. Total energy = 1200 kcal/mol (1198 without restraints) Performing minimization step: 2212. Total energy = 1200 kcal/mol (1198 without restraints) Performing minimization step: 2213. Total energy = 1200 kcal/mol (1198 without restraints) Performing minimization step: 2214. Total energy = 1200 kcal/mol (1198 without restraints) Performing minimization step: 2215. Total energy = 1200 kcal/mol (1198 without restraints) Performing minimization step: 2216. Total energy = 1200 kcal/mol (1198 without restraints) Performing minimization step: 2217. Total energy = 1199 kcal/mol (1198 without restraints) Performing minimization step: 2218. Total energy = 1199 kcal/mol (1198 without restraints) Performing minimization step: 2219. Total energy = 1199 kcal/mol (1198 without restraints) Performing minimization step: 2220. Total energy = 1199 kcal/mol (1197 without restraints) Performing minimization step: 2221. Total energy = 1199 kcal/mol (1197 without restraints) Performing minimization step: 2222. Total energy = 1199 kcal/mol (1197 without restraints) Performing minimization step: 2223. Total energy = 1199 kcal/mol (1197 without restraints) Performing minimization step: 2224. Total energy = 1199 kcal/mol (1197 without restraints) Performing minimization step: 2225. Total energy = 1199 kcal/mol (1197 without restraints) Performing minimization step: 2226. Total energy = 1199 kcal/mol (1197 without restraints) Performing minimization step: 2227. Total energy = 1199 kcal/mol (1197 without restraints) Performing minimization step: 2228. Total energy = 1198 kcal/mol (1197 without restraints) Performing minimization step: 2229. Total energy = 1198 kcal/mol (1197 without restraints) Performing minimization step: 2230. Total energy = 1198 kcal/mol (1197 without restraints) Performing minimization step: 2231. Total energy = 1198 kcal/mol (1196 without restraints) Performing minimization step: 2232. Total energy = 1198 kcal/mol (1196 without restraints) Performing minimization step: 2233. Total energy = 1198 kcal/mol (1196 without restraints) Performing minimization step: 2234. Total energy = 1198 kcal/mol (1196 without restraints) Performing minimization step: 2235. Total energy = 1198 kcal/mol (1196 without restraints) Performing minimization step: 2236. Total energy = 1198 kcal/mol (1196 without restraints) Performing minimization step: 2237. Total energy = 1198 kcal/mol (1196 without restraints) Performing minimization step: 2238. Total energy = 1198 kcal/mol (1196 without restraints) Performing minimization step: 2239. Total energy = 1198 kcal/mol (1196 without restraints) Performing minimization step: 2240. Total energy = 1197 kcal/mol (1196 without restraints) Performing minimization step: 2241. Total energy = 1197 kcal/mol (1196 without restraints) Performing minimization step: 2242. Total energy = 1197 kcal/mol (1196 without restraints) Performing minimization step: 2243. Total energy = 1197 kcal/mol (1195 without restraints) Performing minimization step: 2244. Total energy = 1197 kcal/mol (1195 without restraints) Performing minimization step: 2245. Total energy = 1197 kcal/mol (1195 without restraints) Performing minimization step: 2246. Total energy = 1197 kcal/mol (1195 without restraints) Performing minimization step: 2247. Total energy = 1197 kcal/mol (1195 without restraints) Performing minimization step: 2248. Total energy = 1197 kcal/mol (1195 without restraints) Performing minimization step: 2249. Total energy = 1197 kcal/mol (1195 without restraints) Performing minimization step: 2250. Total energy = 1197 kcal/mol (1195 without restraints) Performing minimization step: 2251. Total energy = 1196 kcal/mol (1195 without restraints) Performing minimization step: 2252. Total energy = 1196 kcal/mol (1195 without restraints) Performing minimization step: 2253. Total energy = 1196 kcal/mol (1195 without restraints) Performing minimization step: 2254. Total energy = 1196 kcal/mol (1194 without restraints) Performing minimization step: 2255. Total energy = 1196 kcal/mol (1194 without restraints) Performing minimization step: 2256. Total energy = 1196 kcal/mol (1194 without restraints) Performing minimization step: 2257. Total energy = 1196 kcal/mol (1194 without restraints) Performing minimization step: 2258. Total energy = 1196 kcal/mol (1194 without restraints) Performing minimization step: 2259. Total energy = 1196 kcal/mol (1194 without restraints) Performing minimization step: 2260. Total energy = 1196 kcal/mol (1194 without restraints) Performing minimization step: 2261. Total energy = 1196 kcal/mol (1194 without restraints) Performing minimization step: 2262. Total energy = 1196 kcal/mol (1194 without restraints) Performing minimization step: 2263. Total energy = 1195 kcal/mol (1194 without restraints) Performing minimization step: 2264. Total energy = 1195 kcal/mol (1194 without restraints) Performing minimization step: 2265. Total energy = 1195 kcal/mol (1194 without restraints) Performing minimization step: 2266. Total energy = 1195 kcal/mol (1193 without restraints) Performing minimization step: 2267. Total energy = 1195 kcal/mol (1193 without restraints) Performing minimization step: 2268. Total energy = 1195 kcal/mol (1193 without restraints) Performing minimization step: 2269. Total energy = 1195 kcal/mol (1193 without restraints) Performing minimization step: 2270. Total energy = 1195 kcal/mol (1193 without restraints) Performing minimization step: 2271. Total energy = 1195 kcal/mol (1193 without restraints) Performing minimization step: 2272. Total energy = 1195 kcal/mol (1193 without restraints) Performing minimization step: 2273. Total energy = 1195 kcal/mol (1193 without restraints) Performing minimization step: 2274. Total energy = 1195 kcal/mol (1193 without restraints) Performing minimization step: 2275. Total energy = 1194 kcal/mol (1193 without restraints) Performing minimization step: 2276. Total energy = 1194 kcal/mol (1193 without restraints) Performing minimization step: 2277. Total energy = 1194 kcal/mol (1193 without restraints) Performing minimization step: 2278. Total energy = 1194 kcal/mol (1192 without restraints) Performing minimization step: 2279. Total energy = 1194 kcal/mol (1192 without restraints) Performing minimization step: 2280. Total energy = 1194 kcal/mol (1192 without restraints) Performing minimization step: 2281. Total energy = 1194 kcal/mol (1192 without restraints) Performing minimization step: 2282. Total energy = 1194 kcal/mol (1192 without restraints) Performing minimization step: 2283. Total energy = 1194 kcal/mol (1192 without restraints) Performing minimization step: 2284. Total energy = 1194 kcal/mol (1192 without restraints) Performing minimization step: 2285. Total energy = 1194 kcal/mol (1192 without restraints) Performing minimization step: 2286. Total energy = 1193 kcal/mol (1192 without restraints) Performing minimization step: 2287. Total energy = 1193 kcal/mol (1192 without restraints) Performing minimization step: 2288. Total energy = 1193 kcal/mol (1192 without restraints) Performing minimization step: 2289. Total energy = 1193 kcal/mol (1191 without restraints) Performing minimization step: 2290. Total energy = 1193 kcal/mol (1191 without restraints) Performing minimization step: 2291. Total energy = 1193 kcal/mol (1191 without restraints) Performing minimization step: 2292. Total energy = 1193 kcal/mol (1191 without restraints) Performing minimization step: 2293. Total energy = 1193 kcal/mol (1191 without restraints) Performing minimization step: 2294. Total energy = 1193 kcal/mol (1191 without restraints) Performing minimization step: 2295. Total energy = 1193 kcal/mol (1191 without restraints) Performing minimization step: 2296. Total energy = 1193 kcal/mol (1191 without restraints) Performing minimization step: 2297. Total energy = 1193 kcal/mol (1191 without restraints) Performing minimization step: 2298. Total energy = 1192 kcal/mol (1191 without restraints) Performing minimization step: 2299. Total energy = 1192 kcal/mol (1191 without restraints) Performing minimization step: 2300. Total energy = 1192 kcal/mol (1191 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/90a3fe85/tmp/apt_refx/apt_refx.pdb ...Done. Performing minimization step: 2301. Total energy = 1192 kcal/mol (1190 without restraints) Performing minimization step: 2302. Total energy = 1192 kcal/mol (1190 without restraints) Performing minimization step: 2303. Total energy = 1192 kcal/mol (1190 without restraints) Performing minimization step: 2304. Total energy = 1192 kcal/mol (1190 without restraints) Performing minimization step: 2305. Total energy = 1192 kcal/mol (1190 without restraints) Performing minimization step: 2306. Total energy = 1192 kcal/mol (1190 without restraints) Performing minimization step: 2307. Total energy = 1192 kcal/mol (1190 without restraints) Performing minimization step: 2308. Total energy = 1192 kcal/mol (1190 without restraints) Performing minimization step: 2309. Total energy = 1192 kcal/mol (1190 without restraints) Performing minimization step: 2310. Total energy = 1191 kcal/mol (1190 without restraints) Performing minimization step: 2311. Total energy = 1191 kcal/mol (1190 without restraints) Performing minimization step: 2312. Total energy = 1191 kcal/mol (1190 without restraints) Performing minimization step: 2313. Total energy = 1191 kcal/mol (1189 without restraints) Performing minimization step: 2314. Total energy = 1191 kcal/mol (1189 without restraints) Performing minimization step: 2315. Total energy = 1191 kcal/mol (1189 without restraints) Performing minimization step: 2316. Total energy = 1191 kcal/mol (1189 without restraints) Performing minimization step: 2317. Total energy = 1191 kcal/mol (1189 without restraints) Performing minimization step: 2318. Total energy = 1191 kcal/mol (1189 without restraints) Performing minimization step: 2319. Total energy = 1191 kcal/mol (1189 without restraints) Performing minimization step: 2320. Total energy = 1191 kcal/mol (1189 without restraints) Performing minimization step: 2321. Total energy = 1191 kcal/mol (1189 without restraints) Performing minimization step: 2322. Total energy = 1190 kcal/mol (1189 without restraints) Performing minimization step: 2323. Total energy = 1190 kcal/mol (1189 without restraints) Performing minimization step: 2324. Total energy = 1190 kcal/mol (1189 without restraints) Performing minimization step: 2325. Total energy = 1190 kcal/mol (1188 without restraints) Performing minimization step: 2326. Total energy = 1190 kcal/mol (1188 without restraints) Performing minimization step: 2327. Total energy = 1190 kcal/mol (1188 without restraints) Performing minimization step: 2328. Total energy = 1190 kcal/mol (1188 without restraints) Performing minimization step: 2329. Total energy = 1190 kcal/mol (1188 without restraints) Performing minimization step: 2330. Total energy = 1190 kcal/mol (1188 without restraints) Performing minimization step: 2331. Total energy = 1190 kcal/mol (1188 without restraints) Performing minimization step: 2332. Total energy = 1190 kcal/mol (1188 without restraints) Performing minimization step: 2333. Total energy = 1190 kcal/mol (1188 without restraints) Performing minimization step: 2334. Total energy = 1189 kcal/mol (1188 without restraints) Performing minimization step: 2335. Total energy = 1189 kcal/mol (1188 without restraints) Performing minimization step: 2336. Total energy = 1189 kcal/mol (1188 without restraints) Performing minimization step: 2337. Total energy = 1189 kcal/mol (1187 without restraints) Performing minimization step: 2338. Total energy = 1189 kcal/mol (1187 without restraints) Performing minimization step: 2339. Total energy = 1189 kcal/mol (1187 without restraints) Performing minimization step: 2340. Total energy = 1189 kcal/mol (1187 without restraints) Performing minimization step: 2341. Total energy = 1189 kcal/mol (1187 without restraints) Performing minimization step: 2342. Total energy = 1189 kcal/mol (1187 without restraints) Performing minimization step: 2343. Total energy = 1189 kcal/mol (1187 without restraints) Performing minimization step: 2344. Total energy = 1189 kcal/mol (1187 without restraints) Performing minimization step: 2345. Total energy = 1189 kcal/mol (1187 without restraints) Performing minimization step: 2346. Total energy = 1189 kcal/mol (1187 without restraints) Performing minimization step: 2347. Total energy = 1188 kcal/mol (1187 without restraints) Performing minimization step: 2348. Total energy = 1188 kcal/mol (1187 without restraints) Performing minimization step: 2349. Total energy = 1188 kcal/mol (1187 without restraints) Performing minimization step: 2350. Total energy = 1188 kcal/mol (1186 without restraints) Performing minimization step: 2351. Total energy = 1188 kcal/mol (1186 without restraints) Performing minimization step: 2352. Total energy = 1188 kcal/mol (1186 without restraints) Performing minimization step: 2353. Total energy = 1188 kcal/mol (1186 without restraints) Performing minimization step: 2354. Total energy = 1188 kcal/mol (1186 without restraints) Performing minimization step: 2355. Total energy = 1188 kcal/mol (1186 without restraints) Performing minimization step: 2356. Total energy = 1188 kcal/mol (1186 without restraints) Performing minimization step: 2357. Total energy = 1188 kcal/mol (1186 without restraints) Performing minimization step: 2358. Total energy = 1188 kcal/mol (1186 without restraints) Performing minimization step: 2359. Total energy = 1187 kcal/mol (1186 without restraints) Performing minimization step: 2360. Total energy = 1187 kcal/mol (1186 without restraints) Performing minimization step: 2361. Total energy = 1187 kcal/mol (1186 without restraints) Performing minimization step: 2362. Total energy = 1187 kcal/mol (1185 without restraints) Performing minimization step: 2363. Total energy = 1187 kcal/mol (1185 without restraints) Performing minimization step: 2364. Total energy = 1187 kcal/mol (1185 without restraints) Performing minimization step: 2365. Total energy = 1187 kcal/mol (1185 without restraints) Performing minimization step: 2366. Total energy = 1187 kcal/mol (1185 without restraints) Performing minimization step: 2367. Total energy = 1187 kcal/mol (1185 without restraints) Performing minimization step: 2368. Total energy = 1187 kcal/mol (1185 without restraints) Performing minimization step: 2369. Total energy = 1187 kcal/mol (1185 without restraints) Performing minimization step: 2370. Total energy = 1187 kcal/mol (1185 without restraints) Performing minimization step: 2371. Total energy = 1186 kcal/mol (1185 without restraints) Performing minimization step: 2372. Total energy = 1186 kcal/mol (1185 without restraints) Performing minimization step: 2373. Total energy = 1186 kcal/mol (1185 without restraints) Performing minimization step: 2374. Total energy = 1186 kcal/mol (1184 without restraints) Performing minimization step: 2375. Total energy = 1186 kcal/mol (1184 without restraints) Performing minimization step: 2376. Total energy = 1186 kcal/mol (1184 without restraints) Performing minimization step: 2377. Total energy = 1186 kcal/mol (1184 without restraints) Performing minimization step: 2378. Total energy = 1186 kcal/mol (1184 without restraints) Performing minimization step: 2379. Total energy = 1186 kcal/mol (1184 without restraints) Performing minimization step: 2380. Total energy = 1186 kcal/mol (1184 without restraints) Performing minimization step: 2381. Total energy = 1186 kcal/mol (1184 without restraints) Performing minimization step: 2382. Total energy = 1186 kcal/mol (1184 without restraints) Performing minimization step: 2383. Total energy = 1186 kcal/mol (1184 without restraints) Performing minimization step: 2384. Total energy = 1185 kcal/mol (1184 without restraints) Performing minimization step: 2385. Total energy = 1185 kcal/mol (1184 without restraints) Performing minimization step: 2386. Total energy = 1185 kcal/mol (1184 without restraints) Performing minimization step: 2387. Total energy = 1185 kcal/mol (1183 without restraints) Performing minimization step: 2388. Total energy = 1185 kcal/mol (1183 without restraints) Performing minimization step: 2389. Total energy = 1185 kcal/mol (1183 without restraints) Performing minimization step: 2390. Total energy = 1185 kcal/mol (1183 without restraints) Performing minimization step: 2391. Total energy = 1185 kcal/mol (1183 without restraints) Performing minimization step: 2392. Total energy = 1185 kcal/mol (1183 without restraints) Performing minimization step: 2393. Total energy = 1185 kcal/mol (1183 without restraints) Performing minimization step: 2394. Total energy = 1185 kcal/mol (1183 without restraints) Performing minimization step: 2395. Total energy = 1185 kcal/mol (1183 without restraints) Performing minimization step: 2396. Total energy = 1184 kcal/mol (1183 without restraints) Performing minimization step: 2397. Total energy = 1184 kcal/mol (1183 without restraints) Performing minimization step: 2398. Total energy = 1184 kcal/mol (1183 without restraints) Performing minimization step: 2399. Total energy = 1184 kcal/mol (1183 without restraints) Performing minimization step: 2400. Total energy = 1184 kcal/mol (1182 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/90a3fe85/tmp/apt_refx/apt_refx.pdb ...Done. Performing minimization step: 2401. Total energy = 1184 kcal/mol (1182 without restraints) Performing minimization step: 2402. Total energy = 1184 kcal/mol (1182 without restraints) Performing minimization step: 2403. Total energy = 1184 kcal/mol (1182 without restraints) Performing minimization step: 2404. Total energy = 1184 kcal/mol (1182 without restraints) Performing minimization step: 2405. Total energy = 1184 kcal/mol (1182 without restraints) Performing minimization step: 2406. Total energy = 1184 kcal/mol (1182 without restraints) Performing minimization step: 2407. Total energy = 1184 kcal/mol (1182 without restraints) Performing minimization step: 2408. Total energy = 1184 kcal/mol (1182 without restraints) Performing minimization step: 2409. Total energy = 1183 kcal/mol (1182 without restraints) Performing minimization step: 2410. Total energy = 1183 kcal/mol (1182 without restraints) Performing minimization step: 2411. Total energy = 1183 kcal/mol (1182 without restraints) Performing minimization step: 2412. Total energy = 1183 kcal/mol (1181 without restraints) Performing minimization step: 2413. Total energy = 1183 kcal/mol (1181 without restraints) Performing minimization step: 2414. Total energy = 1183 kcal/mol (1181 without restraints) Performing minimization step: 2415. Total energy = 1183 kcal/mol (1181 without restraints) Performing minimization step: 2416. Total energy = 1183 kcal/mol (1181 without restraints) Performing minimization step: 2417. Total energy = 1183 kcal/mol (1181 without restraints) Performing minimization step: 2418. Total energy = 1183 kcal/mol (1181 without restraints) Performing minimization step: 2419. Total energy = 1183 kcal/mol (1181 without restraints) Performing minimization step: 2420. Total energy = 1183 kcal/mol (1181 without restraints) Performing minimization step: 2421. Total energy = 1183 kcal/mol (1181 without restraints) Performing minimization step: 2422. Total energy = 1182 kcal/mol (1181 without restraints) Performing minimization step: 2423. Total energy = 1182 kcal/mol (1181 without restraints) Performing minimization step: 2424. Total energy = 1182 kcal/mol (1181 without restraints) Performing minimization step: 2425. Total energy = 1182 kcal/mol (1180 without restraints) Performing minimization step: 2426. Total energy = 1182 kcal/mol (1180 without restraints) Performing minimization step: 2427. Total energy = 1182 kcal/mol (1180 without restraints) Performing minimization step: 2428. Total energy = 1182 kcal/mol (1180 without restraints) Performing minimization step: 2429. Total energy = 1182 kcal/mol (1180 without restraints) Performing minimization step: 2430. Total energy = 1182 kcal/mol (1180 without restraints) Performing minimization step: 2431. Total energy = 1182 kcal/mol (1180 without restraints) Performing minimization step: 2432. Total energy = 1182 kcal/mol (1180 without restraints) Performing minimization step: 2433. Total energy = 1182 kcal/mol (1180 without restraints) Performing minimization step: 2434. Total energy = 1182 kcal/mol (1180 without restraints) Performing minimization step: 2435. Total energy = 1181 kcal/mol (1180 without restraints) Performing minimization step: 2436. Total energy = 1181 kcal/mol (1180 without restraints) Performing minimization step: 2437. Total energy = 1181 kcal/mol (1180 without restraints) Performing minimization step: 2438. Total energy = 1181 kcal/mol (1179 without restraints) Performing minimization step: 2439. Total energy = 1181 kcal/mol (1179 without restraints) Performing minimization step: 2440. Total energy = 1181 kcal/mol (1179 without restraints) Performing minimization step: 2441. Total energy = 1181 kcal/mol (1179 without restraints) Performing minimization step: 2442. Total energy = 1181 kcal/mol (1179 without restraints) Performing minimization step: 2443. Total energy = 1181 kcal/mol (1179 without restraints) Performing minimization step: 2444. Total energy = 1181 kcal/mol (1179 without restraints) Performing minimization step: 2445. Total energy = 1181 kcal/mol (1179 without restraints) Performing minimization step: 2446. Total energy = 1181 kcal/mol (1179 without restraints) Performing minimization step: 2447. Total energy = 1181 kcal/mol (1179 without restraints) Performing minimization step: 2448. Total energy = 1180 kcal/mol (1179 without restraints) Performing minimization step: 2449. Total energy = 1180 kcal/mol (1179 without restraints) Performing minimization step: 2450. Total energy = 1180 kcal/mol (1179 without restraints) Performing minimization step: 2451. Total energy = 1180 kcal/mol (1178 without restraints) Performing minimization step: 2452. Total energy = 1180 kcal/mol (1178 without restraints) Performing minimization step: 2453. Total energy = 1180 kcal/mol (1178 without restraints) Performing minimization step: 2454. Total energy = 1180 kcal/mol (1178 without restraints) Performing minimization step: 2455. Total energy = 1180 kcal/mol (1178 without restraints) Performing minimization step: 2456. Total energy = 1180 kcal/mol (1178 without restraints) Performing minimization step: 2457. Total energy = 1180 kcal/mol (1178 without restraints) Performing minimization step: 2458. Total energy = 1180 kcal/mol (1178 without restraints) Performing minimization step: 2459. Total energy = 1180 kcal/mol (1178 without restraints) Performing minimization step: 2460. Total energy = 1180 kcal/mol (1178 without restraints) Performing minimization step: 2461. Total energy = 1179 kcal/mol (1178 without restraints) Performing minimization step: 2462. Total energy = 1179 kcal/mol (1178 without restraints) Performing minimization step: 2463. Total energy = 1179 kcal/mol (1178 without restraints) Performing minimization step: 2464. Total energy = 1179 kcal/mol (1177 without restraints) Performing minimization step: 2465. Total energy = 1179 kcal/mol (1177 without restraints) Performing minimization step: 2466. Total energy = 1179 kcal/mol (1177 without restraints) Performing minimization step: 2467. Total energy = 1179 kcal/mol (1177 without restraints) Performing minimization step: 2468. Total energy = 1179 kcal/mol (1177 without restraints) Performing minimization step: 2469. Total energy = 1179 kcal/mol (1177 without restraints) Performing minimization step: 2470. Total energy = 1179 kcal/mol (1177 without restraints) Performing minimization step: 2471. Total energy = 1179 kcal/mol (1177 without restraints) Performing minimization step: 2472. Total energy = 1179 kcal/mol (1177 without restraints) Performing minimization step: 2473. Total energy = 1179 kcal/mol (1177 without restraints) Performing minimization step: 2474. Total energy = 1178 kcal/mol (1177 without restraints) Performing minimization step: 2475. Total energy = 1178 kcal/mol (1177 without restraints) Performing minimization step: 2476. Total energy = 1178 kcal/mol (1177 without restraints) Performing minimization step: 2477. Total energy = 1178 kcal/mol (1176 without restraints) Performing minimization step: 2478. Total energy = 1178 kcal/mol (1176 without restraints) Performing minimization step: 2479. Total energy = 1178 kcal/mol (1176 without restraints) Performing minimization step: 2480. Total energy = 1178 kcal/mol (1176 without restraints) Performing minimization step: 2481. Total energy = 1178 kcal/mol (1176 without restraints) Performing minimization step: 2482. Total energy = 1178 kcal/mol (1176 without restraints) Performing minimization step: 2483. Total energy = 1178 kcal/mol (1176 without restraints) Performing minimization step: 2484. Total energy = 1178 kcal/mol (1176 without restraints) Performing minimization step: 2485. Total energy = 1178 kcal/mol (1176 without restraints) Performing minimization step: 2486. Total energy = 1178 kcal/mol (1176 without restraints) Performing minimization step: 2487. Total energy = 1177 kcal/mol (1176 without restraints) Performing minimization step: 2488. Total energy = 1177 kcal/mol (1176 without restraints) Performing minimization step: 2489. Total energy = 1177 kcal/mol (1176 without restraints) Performing minimization step: 2490. Total energy = 1177 kcal/mol (1175 without restraints) Performing minimization step: 2491. Total energy = 1177 kcal/mol (1175 without restraints) Performing minimization step: 2492. Total energy = 1177 kcal/mol (1175 without restraints) Performing minimization step: 2493. Total energy = 1177 kcal/mol (1175 without restraints) Performing minimization step: 2494. Total energy = 1177 kcal/mol (1175 without restraints) Performing minimization step: 2495. Total energy = 1177 kcal/mol (1175 without restraints) Performing minimization step: 2496. Total energy = 1177 kcal/mol (1175 without restraints) Performing minimization step: 2497. Total energy = 1177 kcal/mol (1175 without restraints) Performing minimization step: 2498. Total energy = 1177 kcal/mol (1175 without restraints) Performing minimization step: 2499. Total energy = 1177 kcal/mol (1175 without restraints) Performing minimization step: 2500. Total energy = 1176 kcal/mol (1175 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/90a3fe85/tmp/apt_refx/apt_refx.pdb ...Done. Performing minimization step: 2501. Total energy = 1176 kcal/mol (1175 without restraints) Performing minimization step: 2502. Total energy = 1176 kcal/mol (1175 without restraints) Performing minimization step: 2503. Total energy = 1176 kcal/mol (1175 without restraints) Performing minimization step: 2504. Total energy = 1176 kcal/mol (1174 without restraints) Performing minimization step: 2505. Total energy = 1176 kcal/mol (1174 without restraints) Performing minimization step: 2506. Total energy = 1176 kcal/mol (1174 without restraints) Performing minimization step: 2507. Total energy = 1176 kcal/mol (1174 without restraints) Performing minimization step: 2508. Total energy = 1176 kcal/mol (1174 without restraints) Performing minimization step: 2509. Total energy = 1176 kcal/mol (1174 without restraints) Performing minimization step: 2510. Total energy = 1176 kcal/mol (1174 without restraints) Performing minimization step: 2511. Total energy = 1176 kcal/mol (1174 without restraints) Performing minimization step: 2512. Total energy = 1176 kcal/mol (1174 without restraints) Performing minimization step: 2513. Total energy = 1176 kcal/mol (1174 without restraints) Performing minimization step: 2514. Total energy = 1175 kcal/mol (1174 without restraints) Performing minimization step: 2515. Total energy = 1175 kcal/mol (1174 without restraints) Performing minimization step: 2516. Total energy = 1175 kcal/mol (1174 without restraints) Performing minimization step: 2517. Total energy = 1175 kcal/mol (1173 without restraints) Performing minimization step: 2518. Total energy = 1175 kcal/mol (1173 without restraints) Performing minimization step: 2519. Total energy = 1175 kcal/mol (1173 without restraints) Performing minimization step: 2520. Total energy = 1175 kcal/mol (1173 without restraints) Performing minimization step: 2521. Total energy = 1175 kcal/mol (1173 without restraints) Performing minimization step: 2522. Total energy = 1175 kcal/mol (1173 without restraints) Performing minimization step: 2523. Total energy = 1175 kcal/mol (1173 without restraints) Performing minimization step: 2524. Total energy = 1175 kcal/mol (1173 without restraints) Performing minimization step: 2525. Total energy = 1175 kcal/mol (1173 without restraints) Performing minimization step: 2526. Total energy = 1175 kcal/mol (1173 without restraints) Performing minimization step: 2527. Total energy = 1175 kcal/mol (1173 without restraints) Performing minimization step: 2528. Total energy = 1174 kcal/mol (1173 without restraints) Performing minimization step: 2529. Total energy = 1174 kcal/mol (1173 without restraints) Performing minimization step: 2530. Total energy = 1174 kcal/mol (1173 without restraints) Performing minimization step: 2531. Total energy = 1174 kcal/mol (1172 without restraints) Performing minimization step: 2532. Total energy = 1174 kcal/mol (1172 without restraints) Performing minimization step: 2533. Total energy = 1174 kcal/mol (1172 without restraints) Performing minimization step: 2534. Total energy = 1174 kcal/mol (1172 without restraints) Performing minimization step: 2535. Total energy = 1174 kcal/mol (1172 without restraints) Performing minimization step: 2536. Total energy = 1174 kcal/mol (1172 without restraints) Performing minimization step: 2537. Total energy = 1174 kcal/mol (1172 without restraints) Performing minimization step: 2538. Total energy = 1174 kcal/mol (1172 without restraints) Performing minimization step: 2539. Total energy = 1174 kcal/mol (1172 without restraints) Performing minimization step: 2540. Total energy = 1174 kcal/mol (1172 without restraints) Performing minimization step: 2541. Total energy = 1173 kcal/mol (1172 without restraints) Performing minimization step: 2542. Total energy = 1173 kcal/mol (1172 without restraints) Performing minimization step: 2543. Total energy = 1173 kcal/mol (1172 without restraints) Performing minimization step: 2544. Total energy = 1173 kcal/mol (1172 without restraints) Performing minimization step: 2545. Total energy = 1173 kcal/mol (1171 without restraints) Performing minimization step: 2546. Total energy = 1173 kcal/mol (1171 without restraints) Performing minimization step: 2547. Total energy = 1173 kcal/mol (1171 without restraints) Performing minimization step: 2548. Total energy = 1173 kcal/mol (1171 without restraints) Performing minimization step: 2549. Total energy = 1173 kcal/mol (1171 without restraints) Performing minimization step: 2550. Total energy = 1173 kcal/mol (1171 without restraints) Performing minimization step: 2551. Total energy = 1173 kcal/mol (1171 without restraints) Performing minimization step: 2552. Total energy = 1173 kcal/mol (1171 without restraints) Performing minimization step: 2553. Total energy = 1173 kcal/mol (1171 without restraints) Performing minimization step: 2554. Total energy = 1173 kcal/mol (1171 without restraints) Performing minimization step: 2555. Total energy = 1172 kcal/mol (1171 without restraints) Performing minimization step: 2556. Total energy = 1172 kcal/mol (1171 without restraints) Performing minimization step: 2557. Total energy = 1172 kcal/mol (1171 without restraints) Performing minimization step: 2558. Total energy = 1172 kcal/mol (1171 without restraints) Performing minimization step: 2559. Total energy = 1172 kcal/mol (1170 without restraints) Performing minimization step: 2560. Total energy = 1172 kcal/mol (1170 without restraints) Performing minimization step: 2561. Total energy = 1172 kcal/mol (1170 without restraints) Performing minimization step: 2562. Total energy = 1172 kcal/mol (1170 without restraints) Performing minimization step: 2563. Total energy = 1172 kcal/mol (1170 without restraints) Performing minimization step: 2564. Total energy = 1172 kcal/mol (1170 without restraints) Performing minimization step: 2565. Total energy = 1172 kcal/mol (1170 without restraints) Performing minimization step: 2566. Total energy = 1172 kcal/mol (1170 without restraints) Performing minimization step: 2567. Total energy = 1172 kcal/mol (1170 without restraints) Performing minimization step: 2568. Total energy = 1172 kcal/mol (1170 without restraints) Performing minimization step: 2569. Total energy = 1171 kcal/mol (1170 without restraints) Performing minimization step: 2570. Total energy = 1171 kcal/mol (1170 without restraints) Performing minimization step: 2571. Total energy = 1171 kcal/mol (1170 without restraints) Performing minimization step: 2572. Total energy = 1171 kcal/mol (1169 without restraints) Performing minimization step: 2573. Total energy = 1171 kcal/mol (1169 without restraints) Performing minimization step: 2574. Total energy = 1171 kcal/mol (1169 without restraints) Performing minimization step: 2575. Total energy = 1171 kcal/mol (1169 without restraints) Performing minimization step: 2576. Total energy = 1171 kcal/mol (1169 without restraints) Performing minimization step: 2577. Total energy = 1171 kcal/mol (1169 without restraints) Performing minimization step: 2578. Total energy = 1171 kcal/mol (1169 without restraints) Performing minimization step: 2579. Total energy = 1171 kcal/mol (1169 without restraints) Performing minimization step: 2580. Total energy = 1171 kcal/mol (1169 without restraints) Performing minimization step: 2581. Total energy = 1171 kcal/mol (1169 without restraints) Performing minimization step: 2582. Total energy = 1171 kcal/mol (1169 without restraints) Performing minimization step: 2583. Total energy = 1170 kcal/mol (1169 without restraints) Performing minimization step: 2584. Total energy = 1170 kcal/mol (1169 without restraints) Performing minimization step: 2585. Total energy = 1170 kcal/mol (1169 without restraints) Performing minimization step: 2586. Total energy = 1170 kcal/mol (1169 without restraints) Performing minimization step: 2587. Total energy = 1170 kcal/mol (1168 without restraints) Performing minimization step: 2588. Total energy = 1170 kcal/mol (1168 without restraints) Performing minimization step: 2589. Total energy = 1170 kcal/mol (1168 without restraints) Performing minimization step: 2590. Total energy = 1170 kcal/mol (1168 without restraints) Performing minimization step: 2591. Total energy = 1170 kcal/mol (1168 without restraints) Performing minimization step: 2592. Total energy = 1170 kcal/mol (1168 without restraints) Performing minimization step: 2593. Total energy = 1170 kcal/mol (1168 without restraints) Performing minimization step: 2594. Total energy = 1170 kcal/mol (1168 without restraints) Performing minimization step: 2595. Total energy = 1170 kcal/mol (1168 without restraints) Performing minimization step: 2596. Total energy = 1170 kcal/mol (1168 without restraints) Performing minimization step: 2597. Total energy = 1169 kcal/mol (1168 without restraints) Performing minimization step: 2598. Total energy = 1169 kcal/mol (1168 without restraints) Performing minimization step: 2599. Total energy = 1169 kcal/mol (1168 without restraints) Performing minimization step: 2600. Total energy = 1169 kcal/mol (1168 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/90a3fe85/tmp/apt_refx/apt_refx.pdb ...Done. Performing minimization step: 2601. Total energy = 1169 kcal/mol (1167 without restraints) Performing minimization step: 2602. Total energy = 1169 kcal/mol (1167 without restraints) Performing minimization step: 2603. Total energy = 1169 kcal/mol (1167 without restraints) Performing minimization step: 2604. Total energy = 1169 kcal/mol (1167 without restraints) Performing minimization step: 2605. Total energy = 1169 kcal/mol (1167 without restraints) Performing minimization step: 2606. Total energy = 1169 kcal/mol (1167 without restraints) Performing minimization step: 2607. Total energy = 1169 kcal/mol (1167 without restraints) Performing minimization step: 2608. Total energy = 1169 kcal/mol (1167 without restraints) Performing minimization step: 2609. Total energy = 1169 kcal/mol (1167 without restraints) Performing minimization step: 2610. Total energy = 1169 kcal/mol (1167 without restraints) Performing minimization step: 2611. Total energy = 1168 kcal/mol (1167 without restraints) Performing minimization step: 2612. Total energy = 1168 kcal/mol (1167 without restraints) Performing minimization step: 2613. Total energy = 1168 kcal/mol (1167 without restraints) Performing minimization step: 2614. Total energy = 1168 kcal/mol (1167 without restraints) Performing minimization step: 2615. Total energy = 1168 kcal/mol (1166 without restraints) Performing minimization step: 2616. Total energy = 1168 kcal/mol (1166 without restraints) Performing minimization step: 2617. Total energy = 1168 kcal/mol (1166 without restraints) Performing minimization step: 2618. Total energy = 1168 kcal/mol (1166 without restraints) Performing minimization step: 2619. Total energy = 1168 kcal/mol (1166 without restraints) Performing minimization step: 2620. Total energy = 1168 kcal/mol (1166 without restraints) Performing minimization step: 2621. Total energy = 1168 kcal/mol (1166 without restraints) Performing minimization step: 2622. Total energy = 1168 kcal/mol (1166 without restraints) Performing minimization step: 2623. Total energy = 1168 kcal/mol (1166 without restraints) Performing minimization step: 2624. Total energy = 1168 kcal/mol (1166 without restraints) Performing minimization step: 2625. Total energy = 1168 kcal/mol (1166 without restraints) Performing minimization step: 2626. Total energy = 1167 kcal/mol (1166 without restraints) Performing minimization step: 2627. Total energy = 1167 kcal/mol (1166 without restraints) Performing minimization step: 2628. Total energy = 1167 kcal/mol (1166 without restraints) Performing minimization step: 2629. Total energy = 1167 kcal/mol (1165 without restraints) Performing minimization step: 2630. Total energy = 1167 kcal/mol (1165 without restraints) Performing minimization step: 2631. Total energy = 1167 kcal/mol (1165 without restraints) Performing minimization step: 2632. Total energy = 1167 kcal/mol (1165 without restraints) Performing minimization step: 2633. Total energy = 1167 kcal/mol (1165 without restraints) Performing minimization step: 2634. Total energy = 1167 kcal/mol (1165 without restraints) Performing minimization step: 2635. Total energy = 1167 kcal/mol (1165 without restraints) Performing minimization step: 2636. Total energy = 1167 kcal/mol (1165 without restraints) Performing minimization step: 2637. Total energy = 1167 kcal/mol (1165 without restraints) Performing minimization step: 2638. Total energy = 1167 kcal/mol (1165 without restraints) Performing minimization step: 2639. Total energy = 1167 kcal/mol (1165 without restraints) Performing minimization step: 2640. Total energy = 1166 kcal/mol (1165 without restraints) Performing minimization step: 2641. Total energy = 1166 kcal/mol (1165 without restraints) Performing minimization step: 2642. Total energy = 1166 kcal/mol (1165 without restraints) Performing minimization step: 2643. Total energy = 1166 kcal/mol (1165 without restraints) Performing minimization step: 2644. Total energy = 1166 kcal/mol (1164 without restraints) Performing minimization step: 2645. Total energy = 1166 kcal/mol (1164 without restraints) Performing minimization step: 2646. Total energy = 1166 kcal/mol (1164 without restraints) Performing minimization step: 2647. Total energy = 1166 kcal/mol (1164 without restraints) Performing minimization step: 2648. Total energy = 1166 kcal/mol (1164 without restraints) Performing minimization step: 2649. Total energy = 1166 kcal/mol (1164 without restraints) Performing minimization step: 2650. Total energy = 1166 kcal/mol (1164 without restraints) Performing minimization step: 2651. Total energy = 1166 kcal/mol (1164 without restraints) Performing minimization step: 2652. Total energy = 1166 kcal/mol (1164 without restraints) Performing minimization step: 2653. Total energy = 1166 kcal/mol (1164 without restraints) Performing minimization step: 2654. Total energy = 1166 kcal/mol (1164 without restraints) Performing minimization step: 2655. Total energy = 1165 kcal/mol (1164 without restraints) Performing minimization step: 2656. Total energy = 1165 kcal/mol (1164 without restraints) Performing minimization step: 2657. Total energy = 1165 kcal/mol (1164 without restraints) Performing minimization step: 2658. Total energy = 1165 kcal/mol (1164 without restraints) Performing minimization step: 2659. Total energy = 1165 kcal/mol (1163 without restraints) Performing minimization step: 2660. Total energy = 1165 kcal/mol (1163 without restraints) Performing minimization step: 2661. Total energy = 1165 kcal/mol (1163 without restraints) Performing minimization step: 2662. Total energy = 1165 kcal/mol (1163 without restraints) Performing minimization step: 2663. Total energy = 1165 kcal/mol (1163 without restraints) Performing minimization step: 2664. Total energy = 1165 kcal/mol (1163 without restraints) Performing minimization step: 2665. Total energy = 1165 kcal/mol (1163 without restraints) Performing minimization step: 2666. Total energy = 1165 kcal/mol (1163 without restraints) Performing minimization step: 2667. Total energy = 1165 kcal/mol (1163 without restraints) Performing minimization step: 2668. Total energy = 1165 kcal/mol (1163 without restraints) Performing minimization step: 2669. Total energy = 1165 kcal/mol (1163 without restraints) Performing minimization step: 2670. Total energy = 1164 kcal/mol (1163 without restraints) Performing minimization step: 2671. Total energy = 1164 kcal/mol (1163 without restraints) Performing minimization step: 2672. Total energy = 1164 kcal/mol (1163 without restraints) Performing minimization step: 2673. Total energy = 1164 kcal/mol (1162 without restraints) Performing minimization step: 2674. Total energy = 1164 kcal/mol (1162 without restraints) Performing minimization step: 2675. Total energy = 1164 kcal/mol (1162 without restraints) Performing minimization step: 2676. Total energy = 1164 kcal/mol (1162 without restraints) Performing minimization step: 2677. Total energy = 1164 kcal/mol (1162 without restraints) Performing minimization step: 2678. Total energy = 1164 kcal/mol (1162 without restraints) Performing minimization step: 2679. Total energy = 1164 kcal/mol (1162 without restraints) Performing minimization step: 2680. Total energy = 1164 kcal/mol (1162 without restraints) Performing minimization step: 2681. Total energy = 1164 kcal/mol (1162 without restraints) Performing minimization step: 2682. Total energy = 1164 kcal/mol (1162 without restraints) Performing minimization step: 2683. Total energy = 1164 kcal/mol (1162 without restraints) Performing minimization step: 2684. Total energy = 1164 kcal/mol (1162 without restraints) Performing minimization step: 2685. Total energy = 1163 kcal/mol (1162 without restraints) Performing minimization step: 2686. Total energy = 1163 kcal/mol (1162 without restraints) Performing minimization step: 2687. Total energy = 1163 kcal/mol (1162 without restraints) Performing minimization step: 2688. Total energy = 1163 kcal/mol (1161 without restraints) Performing minimization step: 2689. Total energy = 1163 kcal/mol (1161 without restraints) Performing minimization step: 2690. Total energy = 1163 kcal/mol (1161 without restraints) Performing minimization step: 2691. Total energy = 1163 kcal/mol (1161 without restraints) Performing minimization step: 2692. Total energy = 1163 kcal/mol (1161 without restraints) Performing minimization step: 2693. Total energy = 1163 kcal/mol (1161 without restraints) Performing minimization step: 2694. Total energy = 1163 kcal/mol (1161 without restraints) Performing minimization step: 2695. Total energy = 1163 kcal/mol (1161 without restraints) Performing minimization step: 2696. Total energy = 1163 kcal/mol (1161 without restraints) Performing minimization step: 2697. Total energy = 1163 kcal/mol (1161 without restraints) Performing minimization step: 2698. Total energy = 1163 kcal/mol (1161 without restraints) Performing minimization step: 2699. Total energy = 1163 kcal/mol (1161 without restraints) Performing minimization step: 2700. Total energy = 1162 kcal/mol (1161 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/90a3fe85/tmp/apt_refx/apt_refx.pdb ...Done. Performing minimization step: 2701. Total energy = 1162 kcal/mol (1161 without restraints) Performing minimization step: 2702. Total energy = 1162 kcal/mol (1161 without restraints) Performing minimization step: 2703. Total energy = 1162 kcal/mol (1160 without restraints) Performing minimization step: 2704. Total energy = 1162 kcal/mol (1160 without restraints) Performing minimization step: 2705. Total energy = 1162 kcal/mol (1160 without restraints) Performing minimization step: 2706. Total energy = 1162 kcal/mol (1160 without restraints) Performing minimization step: 2707. Total energy = 1162 kcal/mol (1160 without restraints) Performing minimization step: 2708. Total energy = 1162 kcal/mol (1160 without restraints) Performing minimization step: 2709. Total energy = 1162 kcal/mol (1160 without restraints) Performing minimization step: 2710. Total energy = 1162 kcal/mol (1160 without restraints) Performing minimization step: 2711. Total energy = 1162 kcal/mol (1160 without restraints) Performing minimization step: 2712. Total energy = 1162 kcal/mol (1160 without restraints) Performing minimization step: 2713. Total energy = 1162 kcal/mol (1160 without restraints) Performing minimization step: 2714. Total energy = 1162 kcal/mol (1160 without restraints) Performing minimization step: 2715. Total energy = 1161 kcal/mol (1160 without restraints) Performing minimization step: 2716. Total energy = 1161 kcal/mol (1160 without restraints) Performing minimization step: 2717. Total energy = 1161 kcal/mol (1160 without restraints) Performing minimization step: 2718. Total energy = 1161 kcal/mol (1160 without restraints) Performing minimization step: 2719. Total energy = 1161 kcal/mol (1159 without restraints) Performing minimization step: 2720. Total energy = 1161 kcal/mol (1159 without restraints) Performing minimization step: 2721. Total energy = 1161 kcal/mol (1159 without restraints) Performing minimization step: 2722. Total energy = 1161 kcal/mol (1159 without restraints) Performing minimization step: 2723. Total energy = 1161 kcal/mol (1159 without restraints) Performing minimization step: 2724. Total energy = 1161 kcal/mol (1159 without restraints) Performing minimization step: 2725. Total energy = 1161 kcal/mol (1159 without restraints) Performing minimization step: 2726. Total energy = 1161 kcal/mol (1159 without restraints) Performing minimization step: 2727. Total energy = 1161 kcal/mol (1159 without restraints) Performing minimization step: 2728. Total energy = 1161 kcal/mol (1159 without restraints) Performing minimization step: 2729. Total energy = 1161 kcal/mol (1159 without restraints) Performing minimization step: 2730. Total energy = 1160 kcal/mol (1159 without restraints) Performing minimization step: 2731. Total energy = 1160 kcal/mol (1159 without restraints) Performing minimization step: 2732. Total energy = 1160 kcal/mol (1159 without restraints) Performing minimization step: 2733. Total energy = 1160 kcal/mol (1159 without restraints) Performing minimization step: 2734. Total energy = 1160 kcal/mol (1158 without restraints) Performing minimization step: 2735. Total energy = 1160 kcal/mol (1158 without restraints) Performing minimization step: 2736. Total energy = 1160 kcal/mol (1158 without restraints) Performing minimization step: 2737. Total energy = 1160 kcal/mol (1158 without restraints) Performing minimization step: 2738. Total energy = 1160 kcal/mol (1158 without restraints) Performing minimization step: 2739. Total energy = 1160 kcal/mol (1158 without restraints) Performing minimization step: 2740. Total energy = 1160 kcal/mol (1158 without restraints) Performing minimization step: 2741. Total energy = 1160 kcal/mol (1158 without restraints) Performing minimization step: 2742. Total energy = 1160 kcal/mol (1158 without restraints) Performing minimization step: 2743. Total energy = 1160 kcal/mol (1158 without restraints) Performing minimization step: 2744. Total energy = 1160 kcal/mol (1158 without restraints) Performing minimization step: 2745. Total energy = 1160 kcal/mol (1158 without restraints) Performing minimization step: 2746. Total energy = 1159 kcal/mol (1158 without restraints) Performing minimization step: 2747. Total energy = 1159 kcal/mol (1158 without restraints) Performing minimization step: 2748. Total energy = 1159 kcal/mol (1158 without restraints) Performing minimization step: 2749. Total energy = 1159 kcal/mol (1157 without restraints) Performing minimization step: 2750. Total energy = 1159 kcal/mol (1157 without restraints) Performing minimization step: 2751. Total energy = 1159 kcal/mol (1157 without restraints) Performing minimization step: 2752. Total energy = 1159 kcal/mol (1157 without restraints) Performing minimization step: 2753. Total energy = 1159 kcal/mol (1157 without restraints) Performing minimization step: 2754. Total energy = 1159 kcal/mol (1157 without restraints) Performing minimization step: 2755. Total energy = 1159 kcal/mol (1157 without restraints) Performing minimization step: 2756. Total energy = 1159 kcal/mol (1157 without restraints) Performing minimization step: 2757. Total energy = 1159 kcal/mol (1157 without restraints) Performing minimization step: 2758. Total energy = 1159 kcal/mol (1157 without restraints) Performing minimization step: 2759. Total energy = 1159 kcal/mol (1157 without restraints) Performing minimization step: 2760. Total energy = 1159 kcal/mol (1157 without restraints) Performing minimization step: 2761. Total energy = 1158 kcal/mol (1157 without restraints) Performing minimization step: 2762. Total energy = 1158 kcal/mol (1157 without restraints) Performing minimization step: 2763. Total energy = 1158 kcal/mol (1157 without restraints) Performing minimization step: 2764. Total energy = 1158 kcal/mol (1157 without restraints) Performing minimization step: 2765. Total energy = 1158 kcal/mol (1156 without restraints) Performing minimization step: 2766. Total energy = 1158 kcal/mol (1156 without restraints) Performing minimization step: 2767. Total energy = 1158 kcal/mol (1156 without restraints) Performing minimization step: 2768. Total energy = 1158 kcal/mol (1156 without restraints) Performing minimization step: 2769. Total energy = 1158 kcal/mol (1156 without restraints) Performing minimization step: 2770. Total energy = 1158 kcal/mol (1156 without restraints) Performing minimization step: 2771. Total energy = 1158 kcal/mol (1156 without restraints) Performing minimization step: 2772. Total energy = 1158 kcal/mol (1156 without restraints) Performing minimization step: 2773. Total energy = 1158 kcal/mol (1156 without restraints) Performing minimization step: 2774. Total energy = 1158 kcal/mol (1156 without restraints) Performing minimization step: 2775. Total energy = 1158 kcal/mol (1156 without restraints) Performing minimization step: 2776. Total energy = 1158 kcal/mol (1156 without restraints) Performing minimization step: 2777. Total energy = 1157 kcal/mol (1156 without restraints) Performing minimization step: 2778. Total energy = 1157 kcal/mol (1156 without restraints) Performing minimization step: 2779. Total energy = 1157 kcal/mol (1156 without restraints) Performing minimization step: 2780. Total energy = 1157 kcal/mol (1156 without restraints) Performing minimization step: 2781. Total energy = 1157 kcal/mol (1155 without restraints) Performing minimization step: 2782. Total energy = 1157 kcal/mol (1155 without restraints) Performing minimization step: 2783. Total energy = 1157 kcal/mol (1155 without restraints) Performing minimization step: 2784. Total energy = 1157 kcal/mol (1155 without restraints) Performing minimization step: 2785. Total energy = 1157 kcal/mol (1155 without restraints) Performing minimization step: 2786. Total energy = 1157 kcal/mol (1155 without restraints) Performing minimization step: 2787. Total energy = 1157 kcal/mol (1155 without restraints) Performing minimization step: 2788. Total energy = 1157 kcal/mol (1155 without restraints) Performing minimization step: 2789. Total energy = 1157 kcal/mol (1155 without restraints) Performing minimization step: 2790. Total energy = 1157 kcal/mol (1155 without restraints) Performing minimization step: 2791. Total energy = 1157 kcal/mol (1155 without restraints) Performing minimization step: 2792. Total energy = 1157 kcal/mol (1155 without restraints) Performing minimization step: 2793. Total energy = 1156 kcal/mol (1155 without restraints) Performing minimization step: 2794. Total energy = 1156 kcal/mol (1155 without restraints) Performing minimization step: 2795. Total energy = 1156 kcal/mol (1155 without restraints) Performing minimization step: 2796. Total energy = 1156 kcal/mol (1154 without restraints) Performing minimization step: 2797. Total energy = 1156 kcal/mol (1154 without restraints) Performing minimization step: 2798. Total energy = 1156 kcal/mol (1154 without restraints) Performing minimization step: 2799. Total energy = 1156 kcal/mol (1154 without restraints) Performing minimization step: 2800. Total energy = 1156 kcal/mol (1154 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/90a3fe85/tmp/apt_refx/apt_refx.pdb ...Done. Performing minimization step: 2801. Total energy = 1156 kcal/mol (1154 without restraints) Performing minimization step: 2802. Total energy = 1156 kcal/mol (1154 without restraints) Performing minimization step: 2803. Total energy = 1156 kcal/mol (1154 without restraints) Performing minimization step: 2804. Total energy = 1156 kcal/mol (1154 without restraints) Performing minimization step: 2805. Total energy = 1156 kcal/mol (1154 without restraints) Performing minimization step: 2806. Total energy = 1156 kcal/mol (1154 without restraints) Performing minimization step: 2807. Total energy = 1156 kcal/mol (1154 without restraints) Performing minimization step: 2808. Total energy = 1156 kcal/mol (1154 without restraints) Performing minimization step: 2809. Total energy = 1155 kcal/mol (1154 without restraints) Performing minimization step: 2810. Total energy = 1155 kcal/mol (1154 without restraints) Performing minimization step: 2811. Total energy = 1155 kcal/mol (1154 without restraints) Performing minimization step: 2812. Total energy = 1155 kcal/mol (1154 without restraints) Performing minimization step: 2813. Total energy = 1155 kcal/mol (1153 without restraints) Performing minimization step: 2814. Total energy = 1155 kcal/mol (1153 without restraints) Performing minimization step: 2815. Total energy = 1155 kcal/mol (1153 without restraints) Performing minimization step: 2816. Total energy = 1155 kcal/mol (1153 without restraints) Performing minimization step: 2817. Total energy = 1155 kcal/mol (1153 without restraints) Performing minimization step: 2818. Total energy = 1155 kcal/mol (1153 without restraints) Performing minimization step: 2819. Total energy = 1155 kcal/mol (1153 without restraints) Performing minimization step: 2820. Total energy = 1155 kcal/mol (1153 without restraints) Performing minimization step: 2821. Total energy = 1155 kcal/mol (1153 without restraints) Performing minimization step: 2822. Total energy = 1155 kcal/mol (1153 without restraints) Performing minimization step: 2823. Total energy = 1155 kcal/mol (1153 without restraints) Performing minimization step: 2824. Total energy = 1155 kcal/mol (1153 without restraints) Performing minimization step: 2825. Total energy = 1154 kcal/mol (1153 without restraints) Performing minimization step: 2826. Total energy = 1154 kcal/mol (1153 without restraints) Performing minimization step: 2827. Total energy = 1154 kcal/mol (1153 without restraints) Performing minimization step: 2828. Total energy = 1154 kcal/mol (1153 without restraints) Performing minimization step: 2829. Total energy = 1154 kcal/mol (1152 without restraints) Performing minimization step: 2830. Total energy = 1154 kcal/mol (1152 without restraints) Performing minimization step: 2831. Total energy = 1154 kcal/mol (1152 without restraints) Performing minimization step: 2832. Total energy = 1154 kcal/mol (1152 without restraints) Performing minimization step: 2833. Total energy = 1154 kcal/mol (1152 without restraints) Performing minimization step: 2834. Total energy = 1154 kcal/mol (1152 without restraints) Performing minimization step: 2835. Total energy = 1154 kcal/mol (1152 without restraints) Performing minimization step: 2836. Total energy = 1154 kcal/mol (1152 without restraints) Performing minimization step: 2837. Total energy = 1154 kcal/mol (1152 without restraints) Performing minimization step: 2838. Total energy = 1154 kcal/mol (1152 without restraints) Performing minimization step: 2839. Total energy = 1154 kcal/mol (1152 without restraints) Performing minimization step: 2840. Total energy = 1154 kcal/mol (1152 without restraints) Performing minimization step: 2841. Total energy = 1153 kcal/mol (1152 without restraints) Performing minimization step: 2842. Total energy = 1153 kcal/mol (1152 without restraints) Performing minimization step: 2843. Total energy = 1153 kcal/mol (1152 without restraints) Performing minimization step: 2844. Total energy = 1153 kcal/mol (1152 without restraints) Performing minimization step: 2845. Total energy = 1153 kcal/mol (1151 without restraints) Performing minimization step: 2846. Total energy = 1153 kcal/mol (1151 without restraints) Performing minimization step: 2847. Total energy = 1153 kcal/mol (1151 without restraints) Performing minimization step: 2848. Total energy = 1153 kcal/mol (1151 without restraints) Performing minimization step: 2849. Total energy = 1153 kcal/mol (1151 without restraints) Performing minimization step: 2850. Total energy = 1153 kcal/mol (1151 without restraints) Performing minimization step: 2851. Total energy = 1153 kcal/mol (1151 without restraints) Performing minimization step: 2852. Total energy = 1153 kcal/mol (1151 without restraints) Performing minimization step: 2853. Total energy = 1153 kcal/mol (1151 without restraints) Performing minimization step: 2854. Total energy = 1153 kcal/mol (1151 without restraints) Performing minimization step: 2855. Total energy = 1153 kcal/mol (1151 without restraints) Performing minimization step: 2856. Total energy = 1153 kcal/mol (1151 without restraints) Performing minimization step: 2857. Total energy = 1153 kcal/mol (1151 without restraints) Performing minimization step: 2858. Total energy = 1152 kcal/mol (1151 without restraints) Performing minimization step: 2859. Total energy = 1152 kcal/mol (1151 without restraints) Performing minimization step: 2860. Total energy = 1152 kcal/mol (1151 without restraints) Performing minimization step: 2861. Total energy = 1152 kcal/mol (1151 without restraints) Performing minimization step: 2862. Total energy = 1152 kcal/mol (1150 without restraints) Performing minimization step: 2863. Total energy = 1152 kcal/mol (1150 without restraints) Performing minimization step: 2864. Total energy = 1152 kcal/mol (1150 without restraints) Performing minimization step: 2865. Total energy = 1152 kcal/mol (1150 without restraints) Performing minimization step: 2866. Total energy = 1152 kcal/mol (1150 without restraints) Performing minimization step: 2867. Total energy = 1152 kcal/mol (1150 without restraints) Performing minimization step: 2868. Total energy = 1152 kcal/mol (1150 without restraints) Performing minimization step: 2869. Total energy = 1152 kcal/mol (1150 without restraints) Performing minimization step: 2870. Total energy = 1152 kcal/mol (1150 without restraints) Performing minimization step: 2871. Total energy = 1152 kcal/mol (1150 without restraints) Performing minimization step: 2872. Total energy = 1152 kcal/mol (1150 without restraints) Performing minimization step: 2873. Total energy = 1152 kcal/mol (1150 without restraints) Performing minimization step: 2874. Total energy = 1151 kcal/mol (1150 without restraints) Performing minimization step: 2875. Total energy = 1151 kcal/mol (1150 without restraints) Performing minimization step: 2876. Total energy = 1151 kcal/mol (1150 without restraints) Performing minimization step: 2877. Total energy = 1151 kcal/mol (1150 without restraints) Performing minimization step: 2878. Total energy = 1151 kcal/mol (1149 without restraints) Performing minimization step: 2879. Total energy = 1151 kcal/mol (1149 without restraints) Performing minimization step: 2880. Total energy = 1151 kcal/mol (1149 without restraints) Performing minimization step: 2881. Total energy = 1151 kcal/mol (1149 without restraints) Performing minimization step: 2882. Total energy = 1151 kcal/mol (1149 without restraints) Performing minimization step: 2883. Total energy = 1151 kcal/mol (1149 without restraints) Performing minimization step: 2884. Total energy = 1151 kcal/mol (1149 without restraints) Performing minimization step: 2885. Total energy = 1151 kcal/mol (1149 without restraints) Performing minimization step: 2886. Total energy = 1151 kcal/mol (1149 without restraints) Performing minimization step: 2887. Total energy = 1151 kcal/mol (1149 without restraints) Performing minimization step: 2888. Total energy = 1151 kcal/mol (1149 without restraints) Performing minimization step: 2889. Total energy = 1151 kcal/mol (1149 without restraints) Performing minimization step: 2890. Total energy = 1151 kcal/mol (1149 without restraints) Performing minimization step: 2891. Total energy = 1150 kcal/mol (1149 without restraints) Performing minimization step: 2892. Total energy = 1150 kcal/mol (1149 without restraints) Performing minimization step: 2893. Total energy = 1150 kcal/mol (1149 without restraints) Performing minimization step: 2894. Total energy = 1150 kcal/mol (1149 without restraints) Performing minimization step: 2895. Total energy = 1150 kcal/mol (1148 without restraints) Performing minimization step: 2896. Total energy = 1150 kcal/mol (1148 without restraints) Performing minimization step: 2897. Total energy = 1150 kcal/mol (1148 without restraints) Performing minimization step: 2898. Total energy = 1150 kcal/mol (1148 without restraints) Performing minimization step: 2899. Total energy = 1150 kcal/mol (1148 without restraints) Performing minimization step: 2900. Total energy = 1150 kcal/mol (1148 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/90a3fe85/tmp/apt_refx/apt_refx.pdb ...Done. Performing minimization step: 2901. Total energy = 1150 kcal/mol (1148 without restraints) Performing minimization step: 2902. Total energy = 1150 kcal/mol (1148 without restraints) Performing minimization step: 2903. Total energy = 1150 kcal/mol (1148 without restraints) Performing minimization step: 2904. Total energy = 1150 kcal/mol (1148 without restraints) Performing minimization step: 2905. Total energy = 1150 kcal/mol (1148 without restraints) Performing minimization step: 2906. Total energy = 1150 kcal/mol (1148 without restraints) Performing minimization step: 2907. Total energy = 1150 kcal/mol (1148 without restraints) Performing minimization step: 2908. Total energy = 1149 kcal/mol (1148 without restraints) Performing minimization step: 2909. Total energy = 1149 kcal/mol (1148 without restraints) Performing minimization step: 2910. Total energy = 1149 kcal/mol (1148 without restraints) Performing minimization step: 2911. Total energy = 1149 kcal/mol (1148 without restraints) Performing minimization step: 2912. Total energy = 1149 kcal/mol (1147 without restraints) Performing minimization step: 2913. Total energy = 1149 kcal/mol (1147 without restraints) Performing minimization step: 2914. Total energy = 1149 kcal/mol (1147 without restraints) Performing minimization step: 2915. Total energy = 1149 kcal/mol (1147 without restraints) Performing minimization step: 2916. Total energy = 1149 kcal/mol (1147 without restraints) Performing minimization step: 2917. Total energy = 1149 kcal/mol (1147 without restraints) Performing minimization step: 2918. Total energy = 1149 kcal/mol (1147 without restraints) Performing minimization step: 2919. Total energy = 1149 kcal/mol (1147 without restraints) Performing minimization step: 2920. Total energy = 1149 kcal/mol (1147 without restraints) Performing minimization step: 2921. Total energy = 1149 kcal/mol (1147 without restraints) Performing minimization step: 2922. Total energy = 1149 kcal/mol (1147 without restraints) Performing minimization step: 2923. Total energy = 1149 kcal/mol (1147 without restraints) Performing minimization step: 2924. Total energy = 1149 kcal/mol (1147 without restraints) Performing minimization step: 2925. Total energy = 1148 kcal/mol (1147 without restraints) Performing minimization step: 2926. Total energy = 1148 kcal/mol (1147 without restraints) Performing minimization step: 2927. Total energy = 1148 kcal/mol (1147 without restraints) Performing minimization step: 2928. Total energy = 1148 kcal/mol (1147 without restraints) Performing minimization step: 2929. Total energy = 1148 kcal/mol (1146 without restraints) Performing minimization step: 2930. Total energy = 1148 kcal/mol (1146 without restraints) Performing minimization step: 2931. Total energy = 1148 kcal/mol (1146 without restraints) Performing minimization step: 2932. Total energy = 1148 kcal/mol (1146 without restraints) Performing minimization step: 2933. Total energy = 1148 kcal/mol (1146 without restraints) Performing minimization step: 2934. Total energy = 1148 kcal/mol (1146 without restraints) Performing minimization step: 2935. Total energy = 1148 kcal/mol (1146 without restraints) Performing minimization step: 2936. Total energy = 1148 kcal/mol (1146 without restraints) Performing minimization step: 2937. Total energy = 1148 kcal/mol (1146 without restraints) Performing minimization step: 2938. Total energy = 1148 kcal/mol (1146 without restraints) Performing minimization step: 2939. Total energy = 1148 kcal/mol (1146 without restraints) Performing minimization step: 2940. Total energy = 1148 kcal/mol (1146 without restraints) Performing minimization step: 2941. Total energy = 1148 kcal/mol (1146 without restraints) Performing minimization step: 2942. Total energy = 1147 kcal/mol (1146 without restraints) Performing minimization step: 2943. Total energy = 1147 kcal/mol (1146 without restraints) Performing minimization step: 2944. Total energy = 1147 kcal/mol (1146 without restraints) Performing minimization step: 2945. Total energy = 1147 kcal/mol (1146 without restraints) Performing minimization step: 2946. Total energy = 1147 kcal/mol (1145 without restraints) Performing minimization step: 2947. Total energy = 1147 kcal/mol (1145 without restraints) Performing minimization step: 2948. Total energy = 1147 kcal/mol (1145 without restraints) Performing minimization step: 2949. Total energy = 1147 kcal/mol (1145 without restraints) Performing minimization step: 2950. Total energy = 1147 kcal/mol (1145 without restraints) Performing minimization step: 2951. Total energy = 1147 kcal/mol (1145 without restraints) Performing minimization step: 2952. Total energy = 1147 kcal/mol (1145 without restraints) Performing minimization step: 2953. Total energy = 1147 kcal/mol (1145 without restraints) Performing minimization step: 2954. Total energy = 1147 kcal/mol (1145 without restraints) Performing minimization step: 2955. Total energy = 1147 kcal/mol (1145 without restraints) Performing minimization step: 2956. Total energy = 1147 kcal/mol (1145 without restraints) Performing minimization step: 2957. Total energy = 1147 kcal/mol (1145 without restraints) Performing minimization step: 2958. Total energy = 1147 kcal/mol (1145 without restraints) Performing minimization step: 2959. Total energy = 1147 kcal/mol (1145 without restraints) Performing minimization step: 2960. Total energy = 1146 kcal/mol (1145 without restraints) Performing minimization step: 2961. Total energy = 1146 kcal/mol (1145 without restraints) Performing minimization step: 2962. Total energy = 1146 kcal/mol (1145 without restraints) Performing minimization step: 2963. Total energy = 1146 kcal/mol (1145 without restraints) Performing minimization step: 2964. Total energy = 1146 kcal/mol (1144 without restraints) Performing minimization step: 2965. Total energy = 1146 kcal/mol (1144 without restraints) Performing minimization step: 2966. Total energy = 1146 kcal/mol (1144 without restraints) Performing minimization step: 2967. Total energy = 1146 kcal/mol (1144 without restraints) Performing minimization step: 2968. Total energy = 1146 kcal/mol (1144 without restraints) Performing minimization step: 2969. Total energy = 1146 kcal/mol (1144 without restraints) Performing minimization step: 2970. Total energy = 1146 kcal/mol (1144 without restraints) Performing minimization step: 2971. Total energy = 1146 kcal/mol (1144 without restraints) Performing minimization step: 2972. Total energy = 1146 kcal/mol (1144 without restraints) Performing minimization step: 2973. Total energy = 1146 kcal/mol (1144 without restraints) Performing minimization step: 2974. Total energy = 1146 kcal/mol (1144 without restraints) Performing minimization step: 2975. Total energy = 1146 kcal/mol (1144 without restraints) Performing minimization step: 2976. Total energy = 1146 kcal/mol (1144 without restraints) Performing minimization step: 2977. Total energy = 1146 kcal/mol (1144 without restraints) Performing minimization step: 2978. Total energy = 1145 kcal/mol (1144 without restraints) Performing minimization step: 2979. Total energy = 1145 kcal/mol (1144 without restraints) Performing minimization step: 2980. Total energy = 1145 kcal/mol (1144 without restraints) Performing minimization step: 2981. Total energy = 1145 kcal/mol (1144 without restraints) Performing minimization step: 2982. Total energy = 1145 kcal/mol (1143 without restraints) Performing minimization step: 2983. Total energy = 1145 kcal/mol (1143 without restraints) Performing minimization step: 2984. Total energy = 1145 kcal/mol (1143 without restraints) Performing minimization step: 2985. Total energy = 1145 kcal/mol (1143 without restraints) Performing minimization step: 2986. Total energy = 1145 kcal/mol (1143 without restraints) Performing minimization step: 2987. Total energy = 1145 kcal/mol (1143 without restraints) Performing minimization step: 2988. Total energy = 1145 kcal/mol (1143 without restraints) Performing minimization step: 2989. Total energy = 1145 kcal/mol (1143 without restraints) Performing minimization step: 2990. Total energy = 1145 kcal/mol (1143 without restraints) Performing minimization step: 2991. Total energy = 1145 kcal/mol (1143 without restraints) Performing minimization step: 2992. Total energy = 1145 kcal/mol (1143 without restraints) Performing minimization step: 2993. Total energy = 1145 kcal/mol (1143 without restraints) Performing minimization step: 2994. Total energy = 1145 kcal/mol (1143 without restraints) Performing minimization step: 2995. Total energy = 1144 kcal/mol (1143 without restraints) Performing minimization step: 2996. Total energy = 1144 kcal/mol (1143 without restraints) Performing minimization step: 2997. Total energy = 1144 kcal/mol (1143 without restraints) Performing minimization step: 2998. Total energy = 1144 kcal/mol (1143 without restraints) Performing minimization step: 2999. Total energy = 1144 kcal/mol (1142 without restraints) Performing minimization step: 3000. Total energy = 1144 kcal/mol (1142 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/90a3fe85/tmp/apt_refx/apt_refx.pdb ...Done. Performing minimization step: 3001. Total energy = 1144 kcal/mol (1142 without restraints) Performing minimization step: 3002. Total energy = 1144 kcal/mol (1142 without restraints) Performing minimization step: 3003. Total energy = 1144 kcal/mol (1142 without restraints) Performing minimization step: 3004. Total energy = 1144 kcal/mol (1142 without restraints) Performing minimization step: 3005. Total energy = 1144 kcal/mol (1142 without restraints) Performing minimization step: 3006. Total energy = 1144 kcal/mol (1142 without restraints) Performing minimization step: 3007. Total energy = 1144 kcal/mol (1142 without restraints) Performing minimization step: 3008. Total energy = 1144 kcal/mol (1142 without restraints) Performing minimization step: 3009. Total energy = 1144 kcal/mol (1142 without restraints) Performing minimization step: 3010. Total energy = 1144 kcal/mol (1142 without restraints) Performing minimization step: 3011. Total energy = 1144 kcal/mol (1142 without restraints) Performing minimization step: 3012. Total energy = 1144 kcal/mol (1142 without restraints) Performing minimization step: 3013. Total energy = 1143 kcal/mol (1142 without restraints) Performing minimization step: 3014. Total energy = 1143 kcal/mol (1142 without restraints) Performing minimization step: 3015. Total energy = 1143 kcal/mol (1142 without restraints) Performing minimization step: 3016. Total energy = 1143 kcal/mol (1142 without restraints) Performing minimization step: 3017. Total energy = 1143 kcal/mol (1142 without restraints) Performing minimization step: 3018. Total energy = 1143 kcal/mol (1141 without restraints) Performing minimization step: 3019. Total energy = 1143 kcal/mol (1141 without restraints) Performing minimization step: 3020. Total energy = 1143 kcal/mol (1141 without restraints) Performing minimization step: 3021. Total energy = 1143 kcal/mol (1141 without restraints) Performing minimization step: 3022. Total energy = 1143 kcal/mol (1141 without restraints) Performing minimization step: 3023. Total energy = 1143 kcal/mol (1141 without restraints) Performing minimization step: 3024. Total energy = 1143 kcal/mol (1141 without restraints) Performing minimization step: 3025. Total energy = 1143 kcal/mol (1141 without restraints) Performing minimization step: 3026. Total energy = 1143 kcal/mol (1141 without restraints) Performing minimization step: 3027. Total energy = 1143 kcal/mol (1141 without restraints) Performing minimization step: 3028. Total energy = 1143 kcal/mol (1141 without restraints) Performing minimization step: 3029. Total energy = 1143 kcal/mol (1141 without restraints) Performing minimization step: 3030. Total energy = 1143 kcal/mol (1141 without restraints) Performing minimization step: 3031. Total energy = 1143 kcal/mol (1141 without restraints) Performing minimization step: 3032. Total energy = 1142 kcal/mol (1141 without restraints) Performing minimization step: 3033. Total energy = 1142 kcal/mol (1141 without restraints) Performing minimization step: 3034. Total energy = 1142 kcal/mol (1141 without restraints) Performing minimization step: 3035. Total energy = 1142 kcal/mol (1141 without restraints) Performing minimization step: 3036. Total energy = 1142 kcal/mol (1140 without restraints) Performing minimization step: 3037. Total energy = 1142 kcal/mol (1140 without restraints) Performing minimization step: 3038. Total energy = 1142 kcal/mol (1140 without restraints) Performing minimization step: 3039. Total energy = 1142 kcal/mol (1140 without restraints) Performing minimization step: 3040. Total energy = 1142 kcal/mol (1140 without restraints) Performing minimization step: 3041. Total energy = 1142 kcal/mol (1140 without restraints) Performing minimization step: 3042. Total energy = 1142 kcal/mol (1140 without restraints) Performing minimization step: 3043. Total energy = 1142 kcal/mol (1140 without restraints) Performing minimization step: 3044. Total energy = 1142 kcal/mol (1140 without restraints) Performing minimization step: 3045. Total energy = 1142 kcal/mol (1140 without restraints) Performing minimization step: 3046. Total energy = 1142 kcal/mol (1140 without restraints) Performing minimization step: 3047. Total energy = 1142 kcal/mol (1140 without restraints) Performing minimization step: 3048. Total energy = 1142 kcal/mol (1140 without restraints) Performing minimization step: 3049. Total energy = 1142 kcal/mol (1140 without restraints) Performing minimization step: 3050. Total energy = 1141 kcal/mol (1140 without restraints) Performing minimization step: 3051. Total energy = 1141 kcal/mol (1140 without restraints) Performing minimization step: 3052. Total energy = 1141 kcal/mol (1140 without restraints) Performing minimization step: 3053. Total energy = 1141 kcal/mol (1140 without restraints) Performing minimization step: 3054. Total energy = 1141 kcal/mol (1139 without restraints) Performing minimization step: 3055. Total energy = 1141 kcal/mol (1139 without restraints) Performing minimization step: 3056. Total energy = 1141 kcal/mol (1139 without restraints) Performing minimization step: 3057. Total energy = 1141 kcal/mol (1139 without restraints) Performing minimization step: 3058. Total energy = 1141 kcal/mol (1139 without restraints) Performing minimization step: 3059. Total energy = 1141 kcal/mol (1139 without restraints) Performing minimization step: 3060. Total energy = 1141 kcal/mol (1139 without restraints) Performing minimization step: 3061. Total energy = 1141 kcal/mol (1139 without restraints) Performing minimization step: 3062. Total energy = 1141 kcal/mol (1139 without restraints) Performing minimization step: 3063. Total energy = 1141 kcal/mol (1139 without restraints) Performing minimization step: 3064. Total energy = 1141 kcal/mol (1139 without restraints) Performing minimization step: 3065. Total energy = 1141 kcal/mol (1139 without restraints) Performing minimization step: 3066. Total energy = 1141 kcal/mol (1139 without restraints) Performing minimization step: 3067. Total energy = 1141 kcal/mol (1139 without restraints) Performing minimization step: 3068. Total energy = 1141 kcal/mol (1139 without restraints) Performing minimization step: 3069. Total energy = 1140 kcal/mol (1139 without restraints) Performing minimization step: 3070. Total energy = 1140 kcal/mol (1139 without restraints) Performing minimization step: 3071. Total energy = 1140 kcal/mol (1139 without restraints) Performing minimization step: 3072. Total energy = 1140 kcal/mol (1139 without restraints) Performing minimization step: 3073. Total energy = 1140 kcal/mol (1138 without restraints) Performing minimization step: 3074. Total energy = 1140 kcal/mol (1138 without restraints) Performing minimization step: 3075. Total energy = 1140 kcal/mol (1138 without restraints) Performing minimization step: 3076. Total energy = 1140 kcal/mol (1138 without restraints) Performing minimization step: 3077. Total energy = 1140 kcal/mol (1138 without restraints) Performing minimization step: 3078. Total energy = 1140 kcal/mol (1138 without restraints) Performing minimization step: 3079. Total energy = 1140 kcal/mol (1138 without restraints) Performing minimization step: 3080. Total energy = 1140 kcal/mol (1138 without restraints) Performing minimization step: 3081. Total energy = 1140 kcal/mol (1138 without restraints) Performing minimization step: 3082. Total energy = 1140 kcal/mol (1138 without restraints) Performing minimization step: 3083. Total energy = 1140 kcal/mol (1138 without restraints) Performing minimization step: 3084. Total energy = 1140 kcal/mol (1138 without restraints) Performing minimization step: 3085. Total energy = 1140 kcal/mol (1138 without restraints) Performing minimization step: 3086. Total energy = 1140 kcal/mol (1138 without restraints) Performing minimization step: 3087. Total energy = 1140 kcal/mol (1138 without restraints) Performing minimization step: 3088. Total energy = 1139 kcal/mol (1138 without restraints) Performing minimization step: 3089. Total energy = 1139 kcal/mol (1138 without restraints) Performing minimization step: 3090. Total energy = 1139 kcal/mol (1138 without restraints) Performing minimization step: 3091. Total energy = 1139 kcal/mol (1138 without restraints) Performing minimization step: 3092. Total energy = 1139 kcal/mol (1137 without restraints) Performing minimization step: 3093. Total energy = 1139 kcal/mol (1137 without restraints) Performing minimization step: 3094. Total energy = 1139 kcal/mol (1137 without restraints) Performing minimization step: 3095. Total energy = 1139 kcal/mol (1137 without restraints) Performing minimization step: 3096. Total energy = 1139 kcal/mol (1137 without restraints) Performing minimization step: 3097. Total energy = 1139 kcal/mol (1137 without restraints) Performing minimization step: 3098. Total energy = 1139 kcal/mol (1137 without restraints) Performing minimization step: 3099. Total energy = 1139 kcal/mol (1137 without restraints) Performing minimization step: 3100. Total energy = 1139 kcal/mol (1137 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/90a3fe85/tmp/apt_refx/apt_refx.pdb ...Done. Performing minimization step: 3101. Total energy = 1139 kcal/mol (1137 without restraints) Performing minimization step: 3102. Total energy = 1139 kcal/mol (1137 without restraints) Performing minimization step: 3103. Total energy = 1139 kcal/mol (1137 without restraints) Performing minimization step: 3104. Total energy = 1139 kcal/mol (1137 without restraints) Performing minimization step: 3105. Total energy = 1139 kcal/mol (1137 without restraints) Performing minimization step: 3106. Total energy = 1139 kcal/mol (1137 without restraints) Performing minimization step: 3107. Total energy = 1138 kcal/mol (1137 without restraints) Performing minimization step: 3108. Total energy = 1138 kcal/mol (1137 without restraints) Performing minimization step: 3109. Total energy = 1138 kcal/mol (1137 without restraints) Performing minimization step: 3110. Total energy = 1138 kcal/mol (1137 without restraints) Performing minimization step: 3111. Total energy = 1138 kcal/mol (1136 without restraints) Performing minimization step: 3112. Total energy = 1138 kcal/mol (1136 without restraints) Performing minimization step: 3113. Total energy = 1138 kcal/mol (1136 without restraints) Performing minimization step: 3114. Total energy = 1138 kcal/mol (1136 without restraints) Performing minimization step: 3115. Total energy = 1138 kcal/mol (1136 without restraints) Performing minimization step: 3116. Total energy = 1138 kcal/mol (1136 without restraints) Performing minimization step: 3117. Total energy = 1138 kcal/mol (1136 without restraints) Performing minimization step: 3118. Total energy = 1138 kcal/mol (1136 without restraints) Performing minimization step: 3119. Total energy = 1138 kcal/mol (1136 without restraints) Performing minimization step: 3120. Total energy = 1138 kcal/mol (1136 without restraints) Performing minimization step: 3121. Total energy = 1138 kcal/mol (1136 without restraints) Performing minimization step: 3122. Total energy = 1138 kcal/mol (1136 without restraints) Performing minimization step: 3123. Total energy = 1138 kcal/mol (1136 without restraints) Performing minimization step: 3124. Total energy = 1138 kcal/mol (1136 without restraints) Performing minimization step: 3125. Total energy = 1138 kcal/mol (1136 without restraints) Performing minimization step: 3126. Total energy = 1137 kcal/mol (1136 without restraints) Performing minimization step: 3127. Total energy = 1137 kcal/mol (1136 without restraints) Performing minimization step: 3128. Total energy = 1137 kcal/mol (1136 without restraints) Performing minimization step: 3129. Total energy = 1137 kcal/mol (1136 without restraints) Performing minimization step: 3130. Total energy = 1137 kcal/mol (1135 without restraints) Performing minimization step: 3131. Total energy = 1137 kcal/mol (1135 without restraints) Performing minimization step: 3132. Total energy = 1137 kcal/mol (1135 without restraints) Performing minimization step: 3133. Total energy = 1137 kcal/mol (1135 without restraints) Performing minimization step: 3134. Total energy = 1137 kcal/mol (1135 without restraints) Performing minimization step: 3135. Total energy = 1137 kcal/mol (1135 without restraints) Performing minimization step: 3136. Total energy = 1137 kcal/mol (1135 without restraints) Performing minimization step: 3137. Total energy = 1137 kcal/mol (1135 without restraints) Performing minimization step: 3138. Total energy = 1137 kcal/mol (1135 without restraints) Performing minimization step: 3139. Total energy = 1137 kcal/mol (1135 without restraints) Performing minimization step: 3140. Total energy = 1137 kcal/mol (1135 without restraints) Performing minimization step: 3141. Total energy = 1137 kcal/mol (1135 without restraints) Performing minimization step: 3142. Total energy = 1137 kcal/mol (1135 without restraints) Performing minimization step: 3143. Total energy = 1137 kcal/mol (1135 without restraints) Performing minimization step: 3144. Total energy = 1137 kcal/mol (1135 without restraints) Performing minimization step: 3145. Total energy = 1136 kcal/mol (1135 without restraints) Performing minimization step: 3146. Total energy = 1136 kcal/mol (1135 without restraints) Performing minimization step: 3147. Total energy = 1136 kcal/mol (1135 without restraints) Performing minimization step: 3148. Total energy = 1136 kcal/mol (1135 without restraints) Performing minimization step: 3149. Total energy = 1136 kcal/mol (1134 without restraints) Performing minimization step: 3150. Total energy = 1136 kcal/mol (1134 without restraints) Performing minimization step: 3151. Total energy = 1136 kcal/mol (1134 without restraints) Performing minimization step: 3152. Total energy = 1136 kcal/mol (1134 without restraints) Performing minimization step: 3153. Total energy = 1136 kcal/mol (1134 without restraints) Performing minimization step: 3154. Total energy = 1136 kcal/mol (1134 without restraints) Performing minimization step: 3155. Total energy = 1136 kcal/mol (1134 without restraints) Performing minimization step: 3156. Total energy = 1136 kcal/mol (1134 without restraints) Performing minimization step: 3157. Total energy = 1136 kcal/mol (1134 without restraints) Performing minimization step: 3158. Total energy = 1136 kcal/mol (1134 without restraints) Performing minimization step: 3159. Total energy = 1136 kcal/mol (1134 without restraints) Performing minimization step: 3160. Total energy = 1136 kcal/mol (1134 without restraints) Performing minimization step: 3161. Total energy = 1136 kcal/mol (1134 without restraints) Performing minimization step: 3162. Total energy = 1136 kcal/mol (1134 without restraints) Performing minimization step: 3163. Total energy = 1136 kcal/mol (1134 without restraints) Performing minimization step: 3164. Total energy = 1136 kcal/mol (1134 without restraints) Performing minimization step: 3165. Total energy = 1135 kcal/mol (1134 without restraints) Performing minimization step: 3166. Total energy = 1135 kcal/mol (1134 without restraints) Performing minimization step: 3167. Total energy = 1135 kcal/mol (1134 without restraints) Performing minimization step: 3168. Total energy = 1135 kcal/mol (1134 without restraints) Performing minimization step: 3169. Total energy = 1135 kcal/mol (1133 without restraints) Performing minimization step: 3170. Total energy = 1135 kcal/mol (1133 without restraints) Performing minimization step: 3171. Total energy = 1135 kcal/mol (1133 without restraints) Performing minimization step: 3172. Total energy = 1135 kcal/mol (1133 without restraints) Performing minimization step: 3173. Total energy = 1135 kcal/mol (1133 without restraints) Performing minimization step: 3174. Total energy = 1135 kcal/mol (1133 without restraints) Performing minimization step: 3175. Total energy = 1135 kcal/mol (1133 without restraints) Performing minimization step: 3176. Total energy = 1135 kcal/mol (1133 without restraints) Performing minimization step: 3177. Total energy = 1135 kcal/mol (1133 without restraints) Performing minimization step: 3178. Total energy = 1135 kcal/mol (1133 without restraints) Performing minimization step: 3179. Total energy = 1135 kcal/mol (1133 without restraints) Performing minimization step: 3180. Total energy = 1135 kcal/mol (1133 without restraints) Performing minimization step: 3181. Total energy = 1135 kcal/mol (1133 without restraints) Performing minimization step: 3182. Total energy = 1135 kcal/mol (1133 without restraints) Performing minimization step: 3183. Total energy = 1135 kcal/mol (1133 without restraints) Performing minimization step: 3184. Total energy = 1135 kcal/mol (1133 without restraints) Performing minimization step: 3185. Total energy = 1134 kcal/mol (1133 without restraints) Performing minimization step: 3186. Total energy = 1134 kcal/mol (1133 without restraints) Performing minimization step: 3187. Total energy = 1134 kcal/mol (1133 without restraints) Performing minimization step: 3188. Total energy = 1134 kcal/mol (1133 without restraints) Performing minimization step: 3189. Total energy = 1134 kcal/mol (1132 without restraints) Performing minimization step: 3190. Total energy = 1134 kcal/mol (1132 without restraints) Performing minimization step: 3191. Total energy = 1134 kcal/mol (1132 without restraints) Performing minimization step: 3192. Total energy = 1134 kcal/mol (1132 without restraints) Performing minimization step: 3193. Total energy = 1134 kcal/mol (1132 without restraints) Performing minimization step: 3194. Total energy = 1134 kcal/mol (1132 without restraints) Performing minimization step: 3195. Total energy = 1134 kcal/mol (1132 without restraints) Performing minimization step: 3196. Total energy = 1134 kcal/mol (1132 without restraints) Performing minimization step: 3197. Total energy = 1134 kcal/mol (1132 without restraints) Performing minimization step: 3198. Total energy = 1134 kcal/mol (1132 without restraints) Performing minimization step: 3199. Total energy = 1134 kcal/mol (1132 without restraints) Performing minimization step: 3200. Total energy = 1134 kcal/mol (1132 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/90a3fe85/tmp/apt_refx/apt_refx.pdb ...Done. Performing minimization step: 3201. Total energy = 1134 kcal/mol (1132 without restraints) Performing minimization step: 3202. Total energy = 1134 kcal/mol (1132 without restraints) Performing minimization step: 3203. Total energy = 1134 kcal/mol (1132 without restraints) Performing minimization step: 3204. Total energy = 1134 kcal/mol (1132 without restraints) Performing minimization step: 3205. Total energy = 1133 kcal/mol (1132 without restraints) Performing minimization step: 3206. Total energy = 1133 kcal/mol (1132 without restraints) Performing minimization step: 3207. Total energy = 1133 kcal/mol (1132 without restraints) Performing minimization step: 3208. Total energy = 1133 kcal/mol (1132 without restraints) Performing minimization step: 3209. Total energy = 1133 kcal/mol (1131 without restraints) Performing minimization step: 3210. Total energy = 1133 kcal/mol (1131 without restraints) Performing minimization step: 3211. Total energy = 1133 kcal/mol (1131 without restraints) Performing minimization step: 3212. Total energy = 1133 kcal/mol (1131 without restraints) Performing minimization step: 3213. Total energy = 1133 kcal/mol (1131 without restraints) Performing minimization step: 3214. Total energy = 1133 kcal/mol (1131 without restraints) Performing minimization step: 3215. Total energy = 1133 kcal/mol (1131 without restraints) Performing minimization step: 3216. Total energy = 1133 kcal/mol (1131 without restraints) Performing minimization step: 3217. Total energy = 1133 kcal/mol (1131 without restraints) Performing minimization step: 3218. Total energy = 1133 kcal/mol (1131 without restraints) Performing minimization step: 3219. Total energy = 1133 kcal/mol (1131 without restraints) Performing minimization step: 3220. Total energy = 1133 kcal/mol (1131 without restraints) Performing minimization step: 3221. Total energy = 1133 kcal/mol (1131 without restraints) Performing minimization step: 3222. Total energy = 1133 kcal/mol (1131 without restraints) Performing minimization step: 3223. Total energy = 1133 kcal/mol (1131 without restraints) Performing minimization step: 3224. Total energy = 1133 kcal/mol (1131 without restraints) Performing minimization step: 3225. Total energy = 1132 kcal/mol (1131 without restraints) Performing minimization step: 3226. Total energy = 1132 kcal/mol (1131 without restraints) Performing minimization step: 3227. Total energy = 1132 kcal/mol (1131 without restraints) Performing minimization step: 3228. Total energy = 1132 kcal/mol (1131 without restraints) Performing minimization step: 3229. Total energy = 1132 kcal/mol (1131 without restraints) Performing minimization step: 3230. Total energy = 1132 kcal/mol (1130 without restraints) Performing minimization step: 3231. Total energy = 1132 kcal/mol (1130 without restraints) Performing minimization step: 3232. Total energy = 1132 kcal/mol (1130 without restraints) Performing minimization step: 3233. Total energy = 1132 kcal/mol (1130 without restraints) Performing minimization step: 3234. Total energy = 1132 kcal/mol (1130 without restraints) Performing minimization step: 3235. Total energy = 1132 kcal/mol (1130 without restraints) Performing minimization step: 3236. Total energy = 1132 kcal/mol (1130 without restraints) Performing minimization step: 3237. Total energy = 1132 kcal/mol (1130 without restraints) Performing minimization step: 3238. Total energy = 1132 kcal/mol (1130 without restraints) Performing minimization step: 3239. Total energy = 1132 kcal/mol (1130 without restraints) Performing minimization step: 3240. Total energy = 1132 kcal/mol (1130 without restraints) Performing minimization step: 3241. Total energy = 1132 kcal/mol (1130 without restraints) Performing minimization step: 3242. Total energy = 1132 kcal/mol (1130 without restraints) Performing minimization step: 3243. Total energy = 1132 kcal/mol (1130 without restraints) Performing minimization step: 3244. Total energy = 1132 kcal/mol (1130 without restraints) Performing minimization step: 3245. Total energy = 1132 kcal/mol (1130 without restraints) Performing minimization step: 3246. Total energy = 1131 kcal/mol (1130 without restraints) Performing minimization step: 3247. Total energy = 1131 kcal/mol (1130 without restraints) Performing minimization step: 3248. Total energy = 1131 kcal/mol (1130 without restraints) Performing minimization step: 3249. Total energy = 1131 kcal/mol (1130 without restraints) Performing minimization step: 3250. Total energy = 1131 kcal/mol (1129 without restraints) Performing minimization step: 3251. Total energy = 1131 kcal/mol (1129 without restraints) Performing minimization step: 3252. Total energy = 1131 kcal/mol (1129 without restraints) Performing minimization step: 3253. Total energy = 1131 kcal/mol (1129 without restraints) Performing minimization step: 3254. Total energy = 1131 kcal/mol (1129 without restraints) Performing minimization step: 3255. Total energy = 1131 kcal/mol (1129 without restraints) Performing minimization step: 3256. Total energy = 1131 kcal/mol (1129 without restraints) Performing minimization step: 3257. Total energy = 1131 kcal/mol (1129 without restraints) Performing minimization step: 3258. Total energy = 1131 kcal/mol (1129 without restraints) Performing minimization step: 3259. Total energy = 1131 kcal/mol (1129 without restraints) Performing minimization step: 3260. Total energy = 1131 kcal/mol (1129 without restraints) Performing minimization step: 3261. Total energy = 1131 kcal/mol (1129 without restraints) Performing minimization step: 3262. Total energy = 1131 kcal/mol (1129 without restraints) Performing minimization step: 3263. Total energy = 1131 kcal/mol (1129 without restraints) Performing minimization step: 3264. Total energy = 1131 kcal/mol (1129 without restraints) Performing minimization step: 3265. Total energy = 1131 kcal/mol (1129 without restraints) Performing minimization step: 3266. Total energy = 1131 kcal/mol (1129 without restraints) Performing minimization step: 3267. Total energy = 1130 kcal/mol (1129 without restraints) Performing minimization step: 3268. Total energy = 1130 kcal/mol (1129 without restraints) Performing minimization step: 3269. Total energy = 1130 kcal/mol (1129 without restraints) Performing minimization step: 3270. Total energy = 1130 kcal/mol (1129 without restraints) Performing minimization step: 3271. Total energy = 1130 kcal/mol (1128 without restraints) Performing minimization step: 3272. Total energy = 1130 kcal/mol (1128 without restraints) Performing minimization step: 3273. Total energy = 1130 kcal/mol (1128 without restraints) Performing minimization step: 3274. Total energy = 1130 kcal/mol (1128 without restraints) Performing minimization step: 3275. Total energy = 1130 kcal/mol (1128 without restraints) Performing minimization step: 3276. Total energy = 1130 kcal/mol (1128 without restraints) Performing minimization step: 3277. Total energy = 1130 kcal/mol (1128 without restraints) Performing minimization step: 3278. Total energy = 1130 kcal/mol (1128 without restraints) Performing minimization step: 3279. Total energy = 1130 kcal/mol (1128 without restraints) Performing minimization step: 3280. Total energy = 1130 kcal/mol (1128 without restraints) Performing minimization step: 3281. Total energy = 1130 kcal/mol (1128 without restraints) Performing minimization step: 3282. Total energy = 1130 kcal/mol (1128 without restraints) Performing minimization step: 3283. Total energy = 1130 kcal/mol (1128 without restraints) Performing minimization step: 3284. Total energy = 1130 kcal/mol (1128 without restraints) Performing minimization step: 3285. Total energy = 1130 kcal/mol (1128 without restraints) Performing minimization step: 3286. Total energy = 1130 kcal/mol (1128 without restraints) Performing minimization step: 3287. Total energy = 1130 kcal/mol (1128 without restraints) Performing minimization step: 3288. Total energy = 1129 kcal/mol (1128 without restraints) Performing minimization step: 3289. Total energy = 1129 kcal/mol (1128 without restraints) Performing minimization step: 3290. Total energy = 1129 kcal/mol (1128 without restraints) Performing minimization step: 3291. Total energy = 1129 kcal/mol (1128 without restraints) Performing minimization step: 3292. Total energy = 1129 kcal/mol (1127 without restraints) Performing minimization step: 3293. Total energy = 1129 kcal/mol (1127 without restraints) Performing minimization step: 3294. Total energy = 1129 kcal/mol (1127 without restraints) Performing minimization step: 3295. Total energy = 1129 kcal/mol (1127 without restraints) Performing minimization step: 3296. Total energy = 1129 kcal/mol (1127 without restraints) Performing minimization step: 3297. Total energy = 1129 kcal/mol (1127 without restraints) Performing minimization step: 3298. Total energy = 1129 kcal/mol (1127 without restraints) Performing minimization step: 3299. Total energy = 1129 kcal/mol (1127 without restraints) Performing minimization step: 3300. Total energy = 1129 kcal/mol (1127 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/90a3fe85/tmp/apt_refx/apt_refx.pdb ...Done. Performing minimization step: 3301. Total energy = 1129 kcal/mol (1127 without restraints) Performing minimization step: 3302. Total energy = 1129 kcal/mol (1127 without restraints) Performing minimization step: 3303. Total energy = 1129 kcal/mol (1127 without restraints) Performing minimization step: 3304. Total energy = 1129 kcal/mol (1127 without restraints) Performing minimization step: 3305. Total energy = 1129 kcal/mol (1127 without restraints) Performing minimization step: 3306. Total energy = 1129 kcal/mol (1127 without restraints) Performing minimization step: 3307. Total energy = 1129 kcal/mol (1127 without restraints) Performing minimization step: 3308. Total energy = 1129 kcal/mol (1127 without restraints) Performing minimization step: 3309. Total energy = 1128 kcal/mol (1127 without restraints) Performing minimization step: 3310. Total energy = 1128 kcal/mol (1127 without restraints) Performing minimization step: 3311. Total energy = 1128 kcal/mol (1127 without restraints) Performing minimization step: 3312. Total energy = 1128 kcal/mol (1127 without restraints) Performing minimization step: 3313. Total energy = 1128 kcal/mol (1127 without restraints) Performing minimization step: 3314. Total energy = 1128 kcal/mol (1126 without restraints) Performing minimization step: 3315. Total energy = 1128 kcal/mol (1126 without restraints) Performing minimization step: 3316. Total energy = 1128 kcal/mol (1126 without restraints) Performing minimization step: 3317. Total energy = 1128 kcal/mol (1126 without restraints) Performing minimization step: 3318. Total energy = 1128 kcal/mol (1126 without restraints) Performing minimization step: 3319. Total energy = 1128 kcal/mol (1126 without restraints) Performing minimization step: 3320. Total energy = 1128 kcal/mol (1126 without restraints) Performing minimization step: 3321. Total energy = 1128 kcal/mol (1126 without restraints) Performing minimization step: 3322. Total energy = 1128 kcal/mol (1126 without restraints) Performing minimization step: 3323. Total energy = 1128 kcal/mol (1126 without restraints) Performing minimization step: 3324. Total energy = 1128 kcal/mol (1126 without restraints) Performing minimization step: 3325. Total energy = 1128 kcal/mol (1126 without restraints) Performing minimization step: 3326. Total energy = 1128 kcal/mol (1126 without restraints) Performing minimization step: 3327. Total energy = 1128 kcal/mol (1126 without restraints) Performing minimization step: 3328. Total energy = 1128 kcal/mol (1126 without restraints) Performing minimization step: 3329. Total energy = 1128 kcal/mol (1126 without restraints) Performing minimization step: 3330. Total energy = 1128 kcal/mol (1126 without restraints) Performing minimization step: 3331. Total energy = 1127 kcal/mol (1126 without restraints) Performing minimization step: 3332. Total energy = 1127 kcal/mol (1126 without restraints) Performing minimization step: 3333. Total energy = 1127 kcal/mol (1126 without restraints) Performing minimization step: 3334. Total energy = 1127 kcal/mol (1126 without restraints) Performing minimization step: 3335. Total energy = 1127 kcal/mol (1125 without restraints) Performing minimization step: 3336. Total energy = 1127 kcal/mol (1125 without restraints) Performing minimization step: 3337. Total energy = 1127 kcal/mol (1125 without restraints) Performing minimization step: 3338. Total energy = 1127 kcal/mol (1125 without restraints) Performing minimization step: 3339. Total energy = 1127 kcal/mol (1125 without restraints) Performing minimization step: 3340. Total energy = 1127 kcal/mol (1125 without restraints) Performing minimization step: 3341. Total energy = 1127 kcal/mol (1125 without restraints) Performing minimization step: 3342. Total energy = 1127 kcal/mol (1125 without restraints) Performing minimization step: 3343. Total energy = 1127 kcal/mol (1125 without restraints) Performing minimization step: 3344. Total energy = 1127 kcal/mol (1125 without restraints) Performing minimization step: 3345. Total energy = 1127 kcal/mol (1125 without restraints) Performing minimization step: 3346. Total energy = 1127 kcal/mol (1125 without restraints) Performing minimization step: 3347. Total energy = 1127 kcal/mol (1125 without restraints) Performing minimization step: 3348. Total energy = 1127 kcal/mol (1125 without restraints) Performing minimization step: 3349. Total energy = 1127 kcal/mol (1125 without restraints) Performing minimization step: 3350. Total energy = 1127 kcal/mol (1125 without restraints) Performing minimization step: 3351. Total energy = 1127 kcal/mol (1125 without restraints) Performing minimization step: 3352. Total energy = 1127 kcal/mol (1125 without restraints) Performing minimization step: 3353. Total energy = 1126 kcal/mol (1125 without restraints) Performing minimization step: 3354. Total energy = 1126 kcal/mol (1125 without restraints) Performing minimization step: 3355. Total energy = 1126 kcal/mol (1125 without restraints) Performing minimization step: 3356. Total energy = 1126 kcal/mol (1125 without restraints) Performing minimization step: 3357. Total energy = 1126 kcal/mol (1124 without restraints) Performing minimization step: 3358. Total energy = 1126 kcal/mol (1124 without restraints) Performing minimization step: 3359. Total energy = 1126 kcal/mol (1124 without restraints) Performing minimization step: 3360. Total energy = 1126 kcal/mol (1124 without restraints) Performing minimization step: 3361. Total energy = 1126 kcal/mol (1124 without restraints) Performing minimization step: 3362. Total energy = 1126 kcal/mol (1124 without restraints) Performing minimization step: 3363. Total energy = 1126 kcal/mol (1124 without restraints) Performing minimization step: 3364. Total energy = 1126 kcal/mol (1124 without restraints) Performing minimization step: 3365. Total energy = 1126 kcal/mol (1124 without restraints) Performing minimization step: 3366. Total energy = 1126 kcal/mol (1124 without restraints) Performing minimization step: 3367. Total energy = 1126 kcal/mol (1124 without restraints) Performing minimization step: 3368. Total energy = 1126 kcal/mol (1124 without restraints) Performing minimization step: 3369. Total energy = 1126 kcal/mol (1124 without restraints) Performing minimization step: 3370. Total energy = 1126 kcal/mol (1124 without restraints) Performing minimization step: 3371. Total energy = 1126 kcal/mol (1124 without restraints) Performing minimization step: 3372. Total energy = 1126 kcal/mol (1124 without restraints) Performing minimization step: 3373. Total energy = 1126 kcal/mol (1124 without restraints) Performing minimization step: 3374. Total energy = 1126 kcal/mol (1124 without restraints) Performing minimization step: 3375. Total energy = 1125 kcal/mol (1124 without restraints) Performing minimization step: 3376. Total energy = 1125 kcal/mol (1124 without restraints) Performing minimization step: 3377. Total energy = 1125 kcal/mol (1124 without restraints) Performing minimization step: 3378. Total energy = 1125 kcal/mol (1124 without restraints) Performing minimization step: 3379. Total energy = 1125 kcal/mol (1123 without restraints) Performing minimization step: 3380. Total energy = 1125 kcal/mol (1123 without restraints) Performing minimization step: 3381. Total energy = 1125 kcal/mol (1123 without restraints) Performing minimization step: 3382. Total energy = 1125 kcal/mol (1123 without restraints) Performing minimization step: 3383. Total energy = 1125 kcal/mol (1123 without restraints) Performing minimization step: 3384. Total energy = 1125 kcal/mol (1123 without restraints) Performing minimization step: 3385. Total energy = 1125 kcal/mol (1123 without restraints) Performing minimization step: 3386. Total energy = 1125 kcal/mol (1123 without restraints) Performing minimization step: 3387. Total energy = 1125 kcal/mol (1123 without restraints) Performing minimization step: 3388. Total energy = 1125 kcal/mol (1123 without restraints) Performing minimization step: 3389. Total energy = 1125 kcal/mol (1123 without restraints) Performing minimization step: 3390. Total energy = 1125 kcal/mol (1123 without restraints) Performing minimization step: 3391. Total energy = 1125 kcal/mol (1123 without restraints) Performing minimization step: 3392. Total energy = 1125 kcal/mol (1123 without restraints) Performing minimization step: 3393. Total energy = 1125 kcal/mol (1123 without restraints) Performing minimization step: 3394. Total energy = 1125 kcal/mol (1123 without restraints) Performing minimization step: 3395. Total energy = 1125 kcal/mol (1123 without restraints) Performing minimization step: 3396. Total energy = 1125 kcal/mol (1123 without restraints) Performing minimization step: 3397. Total energy = 1124 kcal/mol (1123 without restraints) Performing minimization step: 3398. Total energy = 1124 kcal/mol (1123 without restraints) Performing minimization step: 3399. Total energy = 1124 kcal/mol (1123 without restraints) Performing minimization step: 3400. Total energy = 1124 kcal/mol (1123 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/90a3fe85/tmp/apt_refx/apt_refx.pdb ...Done. Performing minimization step: 3401. Total energy = 1124 kcal/mol (1122 without restraints) Performing minimization step: 3402. Total energy = 1124 kcal/mol (1122 without restraints) Performing minimization step: 3403. Total energy = 1124 kcal/mol (1122 without restraints) Performing minimization step: 3404. Total energy = 1124 kcal/mol (1122 without restraints) Performing minimization step: 3405. Total energy = 1124 kcal/mol (1122 without restraints) Performing minimization step: 3406. Total energy = 1124 kcal/mol (1122 without restraints) Performing minimization step: 3407. Total energy = 1124 kcal/mol (1122 without restraints) Performing minimization step: 3408. Total energy = 1124 kcal/mol (1122 without restraints) Performing minimization step: 3409. Total energy = 1124 kcal/mol (1122 without restraints) Performing minimization step: 3410. Total energy = 1124 kcal/mol (1122 without restraints) Performing minimization step: 3411. Total energy = 1124 kcal/mol (1122 without restraints) Performing minimization step: 3412. Total energy = 1124 kcal/mol (1122 without restraints) Performing minimization step: 3413. Total energy = 1124 kcal/mol (1122 without restraints) Performing minimization step: 3414. Total energy = 1124 kcal/mol (1122 without restraints) Performing minimization step: 3415. Total energy = 1124 kcal/mol (1122 without restraints) Performing minimization step: 3416. Total energy = 1124 kcal/mol (1122 without restraints) Performing minimization step: 3417. Total energy = 1124 kcal/mol (1122 without restraints) Performing minimization step: 3418. Total energy = 1124 kcal/mol (1122 without restraints) Performing minimization step: 3419. Total energy = 1124 kcal/mol (1122 without restraints) Performing minimization step: 3420. Total energy = 1123 kcal/mol (1122 without restraints) Performing minimization step: 3421. Total energy = 1123 kcal/mol (1122 without restraints) Performing minimization step: 3422. Total energy = 1123 kcal/mol (1122 without restraints) Performing minimization step: 3423. Total energy = 1123 kcal/mol (1122 without restraints) Performing minimization step: 3424. Total energy = 1123 kcal/mol (1121 without restraints) Performing minimization step: 3425. Total energy = 1123 kcal/mol (1121 without restraints) Performing minimization step: 3426. Total energy = 1123 kcal/mol (1121 without restraints) Performing minimization step: 3427. Total energy = 1123 kcal/mol (1121 without restraints) Performing minimization step: 3428. Total energy = 1123 kcal/mol (1121 without restraints) Performing minimization step: 3429. Total energy = 1123 kcal/mol (1121 without restraints) Performing minimization step: 3430. Total energy = 1123 kcal/mol (1121 without restraints) Performing minimization step: 3431. Total energy = 1123 kcal/mol (1121 without restraints) Performing minimization step: 3432. Total energy = 1123 kcal/mol (1121 without restraints) Performing minimization step: 3433. Total energy = 1123 kcal/mol (1121 without restraints) Performing minimization step: 3434. Total energy = 1123 kcal/mol (1121 without restraints) Performing minimization step: 3435. Total energy = 1123 kcal/mol (1121 without restraints) Performing minimization step: 3436. Total energy = 1123 kcal/mol (1121 without restraints) Performing minimization step: 3437. Total energy = 1123 kcal/mol (1121 without restraints) Performing minimization step: 3438. Total energy = 1123 kcal/mol (1121 without restraints) Performing minimization step: 3439. Total energy = 1123 kcal/mol (1121 without restraints) Performing minimization step: 3440. Total energy = 1123 kcal/mol (1121 without restraints) Performing minimization step: 3441. Total energy = 1123 kcal/mol (1121 without restraints) Performing minimization step: 3442. Total energy = 1123 kcal/mol (1121 without restraints) Performing minimization step: 3443. Total energy = 1122 kcal/mol (1121 without restraints) Performing minimization step: 3444. Total energy = 1122 kcal/mol (1121 without restraints) Performing minimization step: 3445. Total energy = 1122 kcal/mol (1121 without restraints) Performing minimization step: 3446. Total energy = 1122 kcal/mol (1121 without restraints) Performing minimization step: 3447. Total energy = 1122 kcal/mol (1120 without restraints) Performing minimization step: 3448. Total energy = 1122 kcal/mol (1120 without restraints) Performing minimization step: 3449. Total energy = 1122 kcal/mol (1120 without restraints) Performing minimization step: 3450. Total energy = 1122 kcal/mol (1120 without restraints) Performing minimization step: 3451. Total energy = 1122 kcal/mol (1120 without restraints) Performing minimization step: 3452. Total energy = 1122 kcal/mol (1120 without restraints) Performing minimization step: 3453. Total energy = 1122 kcal/mol (1120 without restraints) Performing minimization step: 3454. Total energy = 1122 kcal/mol (1120 without restraints) Performing minimization step: 3455. Total energy = 1122 kcal/mol (1120 without restraints) Performing minimization step: 3456. Total energy = 1122 kcal/mol (1120 without restraints) Performing minimization step: 3457. Total energy = 1122 kcal/mol (1120 without restraints) Performing minimization step: 3458. Total energy = 1122 kcal/mol (1120 without restraints) Performing minimization step: 3459. Total energy = 1122 kcal/mol (1120 without restraints) Performing minimization step: 3460. Total energy = 1122 kcal/mol (1120 without restraints) Performing minimization step: 3461. Total energy = 1122 kcal/mol (1120 without restraints) Performing minimization step: 3462. Total energy = 1122 kcal/mol (1120 without restraints) Performing minimization step: 3463. Total energy = 1122 kcal/mol (1120 without restraints) Performing minimization step: 3464. Total energy = 1122 kcal/mol (1120 without restraints) Performing minimization step: 3465. Total energy = 1122 kcal/mol (1120 without restraints) Performing minimization step: 3466. Total energy = 1121 kcal/mol (1120 without restraints) Performing minimization step: 3467. Total energy = 1121 kcal/mol (1120 without restraints) Performing minimization step: 3468. Total energy = 1121 kcal/mol (1120 without restraints) Performing minimization step: 3469. Total energy = 1121 kcal/mol (1120 without restraints) Performing minimization step: 3470. Total energy = 1121 kcal/mol (1119 without restraints) Performing minimization step: 3471. Total energy = 1121 kcal/mol (1119 without restraints) Performing minimization step: 3472. Total energy = 1121 kcal/mol (1119 without restraints) Performing minimization step: 3473. Total energy = 1121 kcal/mol (1119 without restraints) Performing minimization step: 3474. Total energy = 1121 kcal/mol (1119 without restraints) Performing minimization step: 3475. Total energy = 1121 kcal/mol (1119 without restraints) Performing minimization step: 3476. Total energy = 1121 kcal/mol (1119 without restraints) Performing minimization step: 3477. Total energy = 1121 kcal/mol (1119 without restraints) Performing minimization step: 3478. Total energy = 1121 kcal/mol (1119 without restraints) Performing minimization step: 3479. Total energy = 1121 kcal/mol (1119 without restraints) Performing minimization step: 3480. Total energy = 1121 kcal/mol (1119 without restraints) Performing minimization step: 3481. Total energy = 1121 kcal/mol (1119 without restraints) Performing minimization step: 3482. Total energy = 1121 kcal/mol (1119 without restraints) Performing minimization step: 3483. Total energy = 1121 kcal/mol (1119 without restraints) Performing minimization step: 3484. Total energy = 1121 kcal/mol (1119 without restraints) Performing minimization step: 3485. Total energy = 1121 kcal/mol (1119 without restraints) Performing minimization step: 3486. Total energy = 1121 kcal/mol (1119 without restraints) Performing minimization step: 3487. Total energy = 1121 kcal/mol (1119 without restraints) Performing minimization step: 3488. Total energy = 1121 kcal/mol (1119 without restraints) Performing minimization step: 3489. Total energy = 1120 kcal/mol (1119 without restraints) Performing minimization step: 3490. Total energy = 1120 kcal/mol (1119 without restraints) Performing minimization step: 3491. Total energy = 1120 kcal/mol (1119 without restraints) Performing minimization step: 3492. Total energy = 1120 kcal/mol (1119 without restraints) Performing minimization step: 3493. Total energy = 1120 kcal/mol (1119 without restraints) Performing minimization step: 3494. Total energy = 1120 kcal/mol (1118 without restraints) Performing minimization step: 3495. Total energy = 1120 kcal/mol (1118 without restraints) Performing minimization step: 3496. Total energy = 1120 kcal/mol (1118 without restraints) Performing minimization step: 3497. Total energy = 1120 kcal/mol (1118 without restraints) Performing minimization step: 3498. Total energy = 1120 kcal/mol (1118 without restraints) Performing minimization step: 3499. Total energy = 1120 kcal/mol (1118 without restraints) Performing minimization step: 3500. Total energy = 1120 kcal/mol (1118 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/90a3fe85/tmp/apt_refx/apt_refx.pdb ...Done. Performing minimization step: 3501. Total energy = 1120 kcal/mol (1118 without restraints) Performing minimization step: 3502. Total energy = 1120 kcal/mol (1118 without restraints) Performing minimization step: 3503. Total energy = 1120 kcal/mol (1118 without restraints) Performing minimization step: 3504. Total energy = 1120 kcal/mol (1118 without restraints) Performing minimization step: 3505. Total energy = 1120 kcal/mol (1118 without restraints) Performing minimization step: 3506. Total energy = 1120 kcal/mol (1118 without restraints) Performing minimization step: 3507. Total energy = 1120 kcal/mol (1118 without restraints) Performing minimization step: 3508. Total energy = 1120 kcal/mol (1118 without restraints) Performing minimization step: 3509. Total energy = 1120 kcal/mol (1118 without restraints) Performing minimization step: 3510. Total energy = 1120 kcal/mol (1118 without restraints) Performing minimization step: 3511. Total energy = 1120 kcal/mol (1118 without restraints) Performing minimization step: 3512. Total energy = 1120 kcal/mol (1118 without restraints) Performing minimization step: 3513. Total energy = 1119 kcal/mol (1118 without restraints) Performing minimization step: 3514. Total energy = 1119 kcal/mol (1118 without restraints) Performing minimization step: 3515. Total energy = 1119 kcal/mol (1118 without restraints) Performing minimization step: 3516. Total energy = 1119 kcal/mol (1118 without restraints) Performing minimization step: 3517. Total energy = 1119 kcal/mol (1117 without restraints) Performing minimization step: 3518. Total energy = 1119 kcal/mol (1117 without restraints) Performing minimization step: 3519. Total energy = 1119 kcal/mol (1117 without restraints) Performing minimization step: 3520. Total energy = 1119 kcal/mol (1117 without restraints) Performing minimization step: 3521. Total energy = 1119 kcal/mol (1117 without restraints) Performing minimization step: 3522. Total energy = 1119 kcal/mol (1117 without restraints) Performing minimization step: 3523. Total energy = 1119 kcal/mol (1117 without restraints) Performing minimization step: 3524. Total energy = 1119 kcal/mol (1117 without restraints) Performing minimization step: 3525. Total energy = 1119 kcal/mol (1117 without restraints) Performing minimization step: 3526. Total energy = 1119 kcal/mol (1117 without restraints) Performing minimization step: 3527. Total energy = 1119 kcal/mol (1117 without restraints) Performing minimization step: 3528. Total energy = 1119 kcal/mol (1117 without restraints) Performing minimization step: 3529. Total energy = 1119 kcal/mol (1117 without restraints) Performing minimization step: 3530. Total energy = 1119 kcal/mol (1117 without restraints) Performing minimization step: 3531. Total energy = 1119 kcal/mol (1117 without restraints) Performing minimization step: 3532. Total energy = 1119 kcal/mol (1117 without restraints) Performing minimization step: 3533. Total energy = 1119 kcal/mol (1117 without restraints) Performing minimization step: 3534. Total energy = 1119 kcal/mol (1117 without restraints) Performing minimization step: 3535. Total energy = 1119 kcal/mol (1117 without restraints) Performing minimization step: 3536. Total energy = 1119 kcal/mol (1117 without restraints) Performing minimization step: 3537. Total energy = 1118 kcal/mol (1117 without restraints) Performing minimization step: 3538. Total energy = 1118 kcal/mol (1117 without restraints) Performing minimization step: 3539. Total energy = 1118 kcal/mol (1117 without restraints) Performing minimization step: 3540. Total energy = 1118 kcal/mol (1117 without restraints) Performing minimization step: 3541. Total energy = 1118 kcal/mol (1116 without restraints) Performing minimization step: 3542. Total energy = 1118 kcal/mol (1116 without restraints) Performing minimization step: 3543. Total energy = 1118 kcal/mol (1116 without restraints) Performing minimization step: 3544. Total energy = 1118 kcal/mol (1116 without restraints) Performing minimization step: 3545. Total energy = 1118 kcal/mol (1116 without restraints) Performing minimization step: 3546. Total energy = 1118 kcal/mol (1116 without restraints) Performing minimization step: 3547. Total energy = 1118 kcal/mol (1116 without restraints) Performing minimization step: 3548. Total energy = 1118 kcal/mol (1116 without restraints) Performing minimization step: 3549. Total energy = 1118 kcal/mol (1116 without restraints) Performing minimization step: 3550. Total energy = 1118 kcal/mol (1116 without restraints) Performing minimization step: 3551. Total energy = 1118 kcal/mol (1116 without restraints) Performing minimization step: 3552. Total energy = 1118 kcal/mol (1116 without restraints) Performing minimization step: 3553. Total energy = 1118 kcal/mol (1116 without restraints) Performing minimization step: 3554. Total energy = 1118 kcal/mol (1116 without restraints) Performing minimization step: 3555. Total energy = 1118 kcal/mol (1116 without restraints) Performing minimization step: 3556. Total energy = 1118 kcal/mol (1116 without restraints) Performing minimization step: 3557. Total energy = 1118 kcal/mol (1116 without restraints) Performing minimization step: 3558. Total energy = 1118 kcal/mol (1116 without restraints) Performing minimization step: 3559. Total energy = 1118 kcal/mol (1116 without restraints) Performing minimization step: 3560. Total energy = 1118 kcal/mol (1116 without restraints) Performing minimization step: 3561. Total energy = 1117 kcal/mol (1116 without restraints) Performing minimization step: 3562. Total energy = 1117 kcal/mol (1116 without restraints) Performing minimization step: 3563. Total energy = 1117 kcal/mol (1116 without restraints) Performing minimization step: 3564. Total energy = 1117 kcal/mol (1116 without restraints) Performing minimization step: 3565. Total energy = 1117 kcal/mol (1116 without restraints) Performing minimization step: 3566. Total energy = 1117 kcal/mol (1115 without restraints) Performing minimization step: 3567. Total energy = 1117 kcal/mol (1115 without restraints) Performing minimization step: 3568. Total energy = 1117 kcal/mol (1115 without restraints) Performing minimization step: 3569. Total energy = 1117 kcal/mol (1115 without restraints) Performing minimization step: 3570. Total energy = 1117 kcal/mol (1115 without restraints) Performing minimization step: 3571. Total energy = 1117 kcal/mol (1115 without restraints) Performing minimization step: 3572. Total energy = 1117 kcal/mol (1115 without restraints) Performing minimization step: 3573. Total energy = 1117 kcal/mol (1115 without restraints) Performing minimization step: 3574. Total energy = 1117 kcal/mol (1115 without restraints) Performing minimization step: 3575. Total energy = 1117 kcal/mol (1115 without restraints) Performing minimization step: 3576. Total energy = 1117 kcal/mol (1115 without restraints) Performing minimization step: 3577. Total energy = 1117 kcal/mol (1115 without restraints) Performing minimization step: 3578. Total energy = 1117 kcal/mol (1115 without restraints) Performing minimization step: 3579. Total energy = 1117 kcal/mol (1115 without restraints) Performing minimization step: 3580. Total energy = 1117 kcal/mol (1115 without restraints) Performing minimization step: 3581. Total energy = 1117 kcal/mol (1115 without restraints) Performing minimization step: 3582. Total energy = 1117 kcal/mol (1115 without restraints) Performing minimization step: 3583. Total energy = 1117 kcal/mol (1115 without restraints) Performing minimization step: 3584. Total energy = 1117 kcal/mol (1115 without restraints) Performing minimization step: 3585. Total energy = 1117 kcal/mol (1115 without restraints) Performing minimization step: 3586. Total energy = 1116 kcal/mol (1115 without restraints) Performing minimization step: 3587. Total energy = 1116 kcal/mol (1115 without restraints) Performing minimization step: 3588. Total energy = 1116 kcal/mol (1115 without restraints) Performing minimization step: 3589. Total energy = 1116 kcal/mol (1115 without restraints) Performing minimization step: 3590. Total energy = 1116 kcal/mol (1114 without restraints) Performing minimization step: 3591. Total energy = 1116 kcal/mol (1114 without restraints) Performing minimization step: 3592. Total energy = 1116 kcal/mol (1114 without restraints) Performing minimization step: 3593. Total energy = 1116 kcal/mol (1114 without restraints) Performing minimization step: 3594. Total energy = 1116 kcal/mol (1114 without restraints) Performing minimization step: 3595. Total energy = 1116 kcal/mol (1114 without restraints) Performing minimization step: 3596. Total energy = 1116 kcal/mol (1114 without restraints) Performing minimization step: 3597. Total energy = 1116 kcal/mol (1114 without restraints) Performing minimization step: 3598. Total energy = 1116 kcal/mol (1114 without restraints) Performing minimization step: 3599. Total energy = 1116 kcal/mol (1114 without restraints) Performing minimization step: 3600. Total energy = 1116 kcal/mol (1114 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/90a3fe85/tmp/apt_refx/apt_refx.pdb ...Done. Performing minimization step: 3601. Total energy = 1116 kcal/mol (1114 without restraints) Performing minimization step: 3602. Total energy = 1116 kcal/mol (1114 without restraints) Performing minimization step: 3603. Total energy = 1116 kcal/mol (1114 without restraints) Performing minimization step: 3604. Total energy = 1116 kcal/mol (1114 without restraints) Performing minimization step: 3605. Total energy = 1116 kcal/mol (1114 without restraints) Performing minimization step: 3606. Total energy = 1116 kcal/mol (1114 without restraints) Performing minimization step: 3607. Total energy = 1116 kcal/mol (1114 without restraints) Performing minimization step: 3608. Total energy = 1116 kcal/mol (1114 without restraints) Performing minimization step: 3609. Total energy = 1116 kcal/mol (1114 without restraints) Performing minimization step: 3610. Total energy = 1116 kcal/mol (1114 without restraints) Performing minimization step: 3611. Total energy = 1115 kcal/mol (1114 without restraints) Performing minimization step: 3612. Total energy = 1115 kcal/mol (1114 without restraints) Performing minimization step: 3613. Total energy = 1115 kcal/mol (1114 without restraints) Performing minimization step: 3614. Total energy = 1115 kcal/mol (1114 without restraints) Performing minimization step: 3615. Total energy = 1115 kcal/mol (1113 without restraints) Performing minimization step: 3616. Total energy = 1115 kcal/mol (1113 without restraints) Performing minimization step: 3617. Total energy = 1115 kcal/mol (1113 without restraints) Performing minimization step: 3618. Total energy = 1115 kcal/mol (1113 without restraints) Performing minimization step: 3619. Total energy = 1115 kcal/mol (1113 without restraints) Performing minimization step: 3620. Total energy = 1115 kcal/mol (1113 without restraints) Performing minimization step: 3621. Total energy = 1115 kcal/mol (1113 without restraints) Performing minimization step: 3622. Total energy = 1115 kcal/mol (1113 without restraints) Performing minimization step: 3623. Total energy = 1115 kcal/mol (1113 without restraints) Performing minimization step: 3624. Total energy = 1115 kcal/mol (1113 without restraints) Performing minimization step: 3625. Total energy = 1115 kcal/mol (1113 without restraints) Performing minimization step: 3626. Total energy = 1115 kcal/mol (1113 without restraints) Performing minimization step: 3627. Total energy = 1115 kcal/mol (1113 without restraints) Performing minimization step: 3628. Total energy = 1115 kcal/mol (1113 without restraints) Performing minimization step: 3629. Total energy = 1115 kcal/mol (1113 without restraints) Performing minimization step: 3630. Total energy = 1115 kcal/mol (1113 without restraints) Performing minimization step: 3631. Total energy = 1115 kcal/mol (1113 without restraints) Performing minimization step: 3632. Total energy = 1115 kcal/mol (1113 without restraints) Performing minimization step: 3633. Total energy = 1115 kcal/mol (1113 without restraints) Performing minimization step: 3634. Total energy = 1115 kcal/mol (1113 without restraints) Performing minimization step: 3635. Total energy = 1115 kcal/mol (1113 without restraints) Performing minimization step: 3636. Total energy = 1114 kcal/mol (1113 without restraints) Performing minimization step: 3637. Total energy = 1114 kcal/mol (1113 without restraints) Performing minimization step: 3638. Total energy = 1114 kcal/mol (1113 without restraints) Performing minimization step: 3639. Total energy = 1114 kcal/mol (1113 without restraints) Performing minimization step: 3640. Total energy = 1114 kcal/mol (1112 without restraints) Performing minimization step: 3641. Total energy = 1114 kcal/mol (1112 without restraints) Performing minimization step: 3642. Total energy = 1114 kcal/mol (1112 without restraints) Performing minimization step: 3643. Total energy = 1114 kcal/mol (1112 without restraints) Performing minimization step: 3644. Total energy = 1114 kcal/mol (1112 without restraints) Performing minimization step: 3645. Total energy = 1114 kcal/mol (1112 without restraints) Performing minimization step: 3646. Total energy = 1114 kcal/mol (1112 without restraints) Performing minimization step: 3647. Total energy = 1114 kcal/mol (1112 without restraints) Performing minimization step: 3648. Total energy = 1114 kcal/mol (1112 without restraints) Performing minimization step: 3649. Total energy = 1114 kcal/mol (1112 without restraints) Performing minimization step: 3650. Total energy = 1114 kcal/mol (1112 without restraints) Performing minimization step: 3651. Total energy = 1114 kcal/mol (1112 without restraints) Performing minimization step: 3652. Total energy = 1114 kcal/mol (1112 without restraints) Performing minimization step: 3653. Total energy = 1114 kcal/mol (1112 without restraints) Performing minimization step: 3654. Total energy = 1114 kcal/mol (1112 without restraints) Performing minimization step: 3655. Total energy = 1114 kcal/mol (1112 without restraints) Performing minimization step: 3656. Total energy = 1114 kcal/mol (1112 without restraints) Performing minimization step: 3657. Total energy = 1114 kcal/mol (1112 without restraints) Performing minimization step: 3658. Total energy = 1114 kcal/mol (1112 without restraints) Performing minimization step: 3659. Total energy = 1114 kcal/mol (1112 without restraints) Performing minimization step: 3660. Total energy = 1114 kcal/mol (1112 without restraints) Performing minimization step: 3661. Total energy = 1113 kcal/mol (1112 without restraints) Performing minimization step: 3662. Total energy = 1113 kcal/mol (1112 without restraints) Performing minimization step: 3663. Total energy = 1113 kcal/mol (1112 without restraints) Performing minimization step: 3664. Total energy = 1113 kcal/mol (1112 without restraints) Performing minimization step: 3665. Total energy = 1113 kcal/mol (1112 without restraints) Performing minimization step: 3666. Total energy = 1113 kcal/mol (1111 without restraints) Performing minimization step: 3667. Total energy = 1113 kcal/mol (1111 without restraints) Performing minimization step: 3668. Total energy = 1113 kcal/mol (1111 without restraints) Performing minimization step: 3669. Total energy = 1113 kcal/mol (1111 without restraints) Performing minimization step: 3670. Total energy = 1113 kcal/mol (1111 without restraints) Performing minimization step: 3671. Total energy = 1113 kcal/mol (1111 without restraints) Performing minimization step: 3672. Total energy = 1113 kcal/mol (1111 without restraints) Performing minimization step: 3673. Total energy = 1113 kcal/mol (1111 without restraints) Performing minimization step: 3674. Total energy = 1113 kcal/mol (1111 without restraints) Performing minimization step: 3675. Total energy = 1113 kcal/mol (1111 without restraints) Performing minimization step: 3676. Total energy = 1113 kcal/mol (1111 without restraints) Performing minimization step: 3677. Total energy = 1113 kcal/mol (1111 without restraints) Performing minimization step: 3678. Total energy = 1113 kcal/mol (1111 without restraints) Performing minimization step: 3679. Total energy = 1113 kcal/mol (1111 without restraints) Performing minimization step: 3680. Total energy = 1113 kcal/mol (1111 without restraints) Performing minimization step: 3681. Total energy = 1113 kcal/mol (1111 without restraints) Performing minimization step: 3682. Total energy = 1113 kcal/mol (1111 without restraints) Performing minimization step: 3683. Total energy = 1113 kcal/mol (1111 without restraints) Performing minimization step: 3684. Total energy = 1113 kcal/mol (1111 without restraints) Performing minimization step: 3685. Total energy = 1113 kcal/mol (1111 without restraints) Performing minimization step: 3686. Total energy = 1113 kcal/mol (1111 without restraints) Performing minimization step: 3687. Total energy = 1112 kcal/mol (1111 without restraints) Performing minimization step: 3688. Total energy = 1112 kcal/mol (1111 without restraints) Performing minimization step: 3689. Total energy = 1112 kcal/mol (1111 without restraints) Performing minimization step: 3690. Total energy = 1112 kcal/mol (1111 without restraints) Performing minimization step: 3691. Total energy = 1112 kcal/mol (1110 without restraints) Performing minimization step: 3692. Total energy = 1112 kcal/mol (1110 without restraints) Performing minimization step: 3693. Total energy = 1112 kcal/mol (1110 without restraints) Performing minimization step: 3694. Total energy = 1112 kcal/mol (1110 without restraints) Performing minimization step: 3695. Total energy = 1112 kcal/mol (1110 without restraints) Performing minimization step: 3696. Total energy = 1112 kcal/mol (1110 without restraints) Performing minimization step: 3697. Total energy = 1112 kcal/mol (1110 without restraints) Performing minimization step: 3698. Total energy = 1112 kcal/mol (1110 without restraints) Performing minimization step: 3699. Total energy = 1112 kcal/mol (1110 without restraints) Performing minimization step: 3700. Total energy = 1112 kcal/mol (1110 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/90a3fe85/tmp/apt_refx/apt_refx.pdb ...Done. Performing minimization step: 3701. Total energy = 1112 kcal/mol (1110 without restraints) Performing minimization step: 3702. Total energy = 1112 kcal/mol (1110 without restraints) Performing minimization step: 3703. Total energy = 1112 kcal/mol (1110 without restraints) Performing minimization step: 3704. Total energy = 1112 kcal/mol (1110 without restraints) Performing minimization step: 3705. Total energy = 1112 kcal/mol (1110 without restraints) Performing minimization step: 3706. Total energy = 1112 kcal/mol (1110 without restraints) Performing minimization step: 3707. Total energy = 1112 kcal/mol (1110 without restraints) Performing minimization step: 3708. Total energy = 1112 kcal/mol (1110 without restraints) Performing minimization step: 3709. Total energy = 1112 kcal/mol (1110 without restraints) Performing minimization step: 3710. Total energy = 1112 kcal/mol (1110 without restraints) Performing minimization step: 3711. Total energy = 1112 kcal/mol (1110 without restraints) Performing minimization step: 3712. Total energy = 1112 kcal/mol (1110 without restraints) Performing minimization step: 3713. Total energy = 1111 kcal/mol (1110 without restraints) Performing minimization step: 3714. Total energy = 1111 kcal/mol (1110 without restraints) Performing minimization step: 3715. Total energy = 1111 kcal/mol (1110 without restraints) Performing minimization step: 3716. Total energy = 1111 kcal/mol (1110 without restraints) Performing minimization step: 3717. Total energy = 1111 kcal/mol (1109 without restraints) Performing minimization step: 3718. Total energy = 1111 kcal/mol (1109 without restraints) Performing minimization step: 3719. Total energy = 1111 kcal/mol (1109 without restraints) Performing minimization step: 3720. Total energy = 1111 kcal/mol (1109 without restraints) Performing minimization step: 3721. Total energy = 1111 kcal/mol (1109 without restraints) Performing minimization step: 3722. Total energy = 1111 kcal/mol (1109 without restraints) Performing minimization step: 3723. Total energy = 1111 kcal/mol (1109 without restraints) Performing minimization step: 3724. Total energy = 1111 kcal/mol (1109 without restraints) Performing minimization step: 3725. Total energy = 1111 kcal/mol (1109 without restraints) Performing minimization step: 3726. Total energy = 1111 kcal/mol (1109 without restraints) Performing minimization step: 3727. Total energy = 1111 kcal/mol (1109 without restraints) Performing minimization step: 3728. Total energy = 1111 kcal/mol (1109 without restraints) Performing minimization step: 3729. Total energy = 1111 kcal/mol (1109 without restraints) Performing minimization step: 3730. Total energy = 1111 kcal/mol (1109 without restraints) Performing minimization step: 3731. Total energy = 1111 kcal/mol (1109 without restraints) Performing minimization step: 3732. Total energy = 1111 kcal/mol (1109 without restraints) Performing minimization step: 3733. Total energy = 1111 kcal/mol (1109 without restraints) Performing minimization step: 3734. Total energy = 1111 kcal/mol (1109 without restraints) Performing minimization step: 3735. Total energy = 1111 kcal/mol (1109 without restraints) Performing minimization step: 3736. Total energy = 1111 kcal/mol (1109 without restraints) Performing minimization step: 3737. Total energy = 1111 kcal/mol (1109 without restraints) Performing minimization step: 3738. Total energy = 1111 kcal/mol (1109 without restraints) Performing minimization step: 3739. Total energy = 1111 kcal/mol (1109 without restraints) Performing minimization step: 3740. Total energy = 1110 kcal/mol (1109 without restraints) Performing minimization step: 3741. Total energy = 1110 kcal/mol (1109 without restraints) Performing minimization step: 3742. Total energy = 1110 kcal/mol (1109 without restraints) Performing minimization step: 3743. Total energy = 1110 kcal/mol (1109 without restraints) Performing minimization step: 3744. Total energy = 1110 kcal/mol (1108 without restraints) Performing minimization step: 3745. Total energy = 1110 kcal/mol (1108 without restraints) Performing minimization step: 3746. Total energy = 1110 kcal/mol (1108 without restraints) Performing minimization step: 3747. Total energy = 1110 kcal/mol (1108 without restraints) Performing minimization step: 3748. Total energy = 1110 kcal/mol (1108 without restraints) Performing minimization step: 3749. Total energy = 1110 kcal/mol (1108 without restraints) Performing minimization step: 3750. Total energy = 1110 kcal/mol (1108 without restraints) Performing minimization step: 3751. Total energy = 1110 kcal/mol (1108 without restraints) Performing minimization step: 3752. Total energy = 1110 kcal/mol (1108 without restraints) Performing minimization step: 3753. Total energy = 1110 kcal/mol (1108 without restraints) Performing minimization step: 3754. Total energy = 1110 kcal/mol (1108 without restraints) Performing minimization step: 3755. Total energy = 1110 kcal/mol (1108 without restraints) Performing minimization step: 3756. Total energy = 1110 kcal/mol (1108 without restraints) Performing minimization step: 3757. Total energy = 1110 kcal/mol (1108 without restraints) Performing minimization step: 3758. Total energy = 1110 kcal/mol (1108 without restraints) Performing minimization step: 3759. Total energy = 1110 kcal/mol (1108 without restraints) Performing minimization step: 3760. Total energy = 1110 kcal/mol (1108 without restraints) Performing minimization step: 3761. Total energy = 1110 kcal/mol (1108 without restraints) Performing minimization step: 3762. Total energy = 1110 kcal/mol (1108 without restraints) Performing minimization step: 3763. Total energy = 1110 kcal/mol (1108 without restraints) Performing minimization step: 3764. Total energy = 1110 kcal/mol (1108 without restraints) Performing minimization step: 3765. Total energy = 1110 kcal/mol (1108 without restraints) Performing minimization step: 3766. Total energy = 1109 kcal/mol (1108 without restraints) Performing minimization step: 3767. Total energy = 1109 kcal/mol (1108 without restraints) Performing minimization step: 3768. Total energy = 1109 kcal/mol (1108 without restraints) Performing minimization step: 3769. Total energy = 1109 kcal/mol (1108 without restraints) Performing minimization step: 3770. Total energy = 1109 kcal/mol (1107 without restraints) Performing minimization step: 3771. Total energy = 1109 kcal/mol (1107 without restraints) Performing minimization step: 3772. Total energy = 1109 kcal/mol (1107 without restraints) Performing minimization step: 3773. Total energy = 1109 kcal/mol (1107 without restraints) Performing minimization step: 3774. Total energy = 1109 kcal/mol (1107 without restraints) Performing minimization step: 3775. Total energy = 1109 kcal/mol (1107 without restraints) Performing minimization step: 3776. Total energy = 1109 kcal/mol (1107 without restraints) Performing minimization step: 3777. Total energy = 1109 kcal/mol (1107 without restraints) Performing minimization step: 3778. Total energy = 1109 kcal/mol (1107 without restraints) Performing minimization step: 3779. Total energy = 1109 kcal/mol (1107 without restraints) Performing minimization step: 3780. Total energy = 1109 kcal/mol (1107 without restraints) Performing minimization step: 3781. Total energy = 1109 kcal/mol (1107 without restraints) Performing minimization step: 3782. Total energy = 1109 kcal/mol (1107 without restraints) Performing minimization step: 3783. Total energy = 1109 kcal/mol (1107 without restraints) Performing minimization step: 3784. Total energy = 1109 kcal/mol (1107 without restraints) Performing minimization step: 3785. Total energy = 1109 kcal/mol (1107 without restraints) Performing minimization step: 3786. Total energy = 1109 kcal/mol (1107 without restraints) Performing minimization step: 3787. Total energy = 1109 kcal/mol (1107 without restraints) Performing minimization step: 3788. Total energy = 1109 kcal/mol (1107 without restraints) Performing minimization step: 3789. Total energy = 1109 kcal/mol (1107 without restraints) Performing minimization step: 3790. Total energy = 1109 kcal/mol (1107 without restraints) Performing minimization step: 3791. Total energy = 1109 kcal/mol (1107 without restraints) Performing minimization step: 3792. Total energy = 1109 kcal/mol (1107 without restraints) Performing minimization step: 3793. Total energy = 1108 kcal/mol (1107 without restraints) Performing minimization step: 3794. Total energy = 1108 kcal/mol (1107 without restraints) Performing minimization step: 3795. Total energy = 1108 kcal/mol (1107 without restraints) Performing minimization step: 3796. Total energy = 1108 kcal/mol (1107 without restraints) Performing minimization step: 3797. Total energy = 1108 kcal/mol (1107 without restraints) Performing minimization step: 3798. Total energy = 1108 kcal/mol (1106 without restraints) Performing minimization step: 3799. Total energy = 1108 kcal/mol (1106 without restraints) Performing minimization step: 3800. Total energy = 1108 kcal/mol (1106 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/90a3fe85/tmp/apt_refx/apt_refx.pdb ...Done. Performing minimization step: 3801. Total energy = 1108 kcal/mol (1106 without restraints) Performing minimization step: 3802. Total energy = 1108 kcal/mol (1106 without restraints) Performing minimization step: 3803. Total energy = 1108 kcal/mol (1106 without restraints) Performing minimization step: 3804. Total energy = 1108 kcal/mol (1106 without restraints) Performing minimization step: 3805. Total energy = 1108 kcal/mol (1106 without restraints) Performing minimization step: 3806. Total energy = 1108 kcal/mol (1106 without restraints) Performing minimization step: 3807. Total energy = 1108 kcal/mol (1106 without restraints) Performing minimization step: 3808. Total energy = 1108 kcal/mol (1106 without restraints) Performing minimization step: 3809. Total energy = 1108 kcal/mol (1106 without restraints) Performing minimization step: 3810. Total energy = 1108 kcal/mol (1106 without restraints) Performing minimization step: 3811. Total energy = 1108 kcal/mol (1106 without restraints) Performing minimization step: 3812. Total energy = 1108 kcal/mol (1106 without restraints) Performing minimization step: 3813. Total energy = 1108 kcal/mol (1106 without restraints) Performing minimization step: 3814. Total energy = 1108 kcal/mol (1106 without restraints) Performing minimization step: 3815. Total energy = 1108 kcal/mol (1106 without restraints) Performing minimization step: 3816. Total energy = 1108 kcal/mol (1106 without restraints) Performing minimization step: 3817. Total energy = 1108 kcal/mol (1106 without restraints) Performing minimization step: 3818. Total energy = 1108 kcal/mol (1106 without restraints) Performing minimization step: 3819. Total energy = 1108 kcal/mol (1106 without restraints) Performing minimization step: 3820. Total energy = 1108 kcal/mol (1106 without restraints) Performing minimization step: 3821. Total energy = 1107 kcal/mol (1106 without restraints) Performing minimization step: 3822. Total energy = 1107 kcal/mol (1106 without restraints) Performing minimization step: 3823. Total energy = 1107 kcal/mol (1106 without restraints) Performing minimization step: 3824. Total energy = 1107 kcal/mol (1106 without restraints) Performing minimization step: 3825. Total energy = 1107 kcal/mol (1105 without restraints) Performing minimization step: 3826. Total energy = 1107 kcal/mol (1105 without restraints) Performing minimization step: 3827. Total energy = 1107 kcal/mol (1105 without restraints) Performing minimization step: 3828. Total energy = 1107 kcal/mol (1105 without restraints) Performing minimization step: 3829. Total energy = 1107 kcal/mol (1105 without restraints) Performing minimization step: 3830. Total energy = 1107 kcal/mol (1105 without restraints) Performing minimization step: 3831. Total energy = 1107 kcal/mol (1105 without restraints) Performing minimization step: 3832. Total energy = 1107 kcal/mol (1105 without restraints) Performing minimization step: 3833. Total energy = 1107 kcal/mol (1105 without restraints) Performing minimization step: 3834. Total energy = 1107 kcal/mol (1105 without restraints) Performing minimization step: 3835. Total energy = 1107 kcal/mol (1105 without restraints) Performing minimization step: 3836. Total energy = 1107 kcal/mol (1105 without restraints) Performing minimization step: 3837. Total energy = 1107 kcal/mol (1105 without restraints) Performing minimization step: 3838. Total energy = 1107 kcal/mol (1105 without restraints) Performing minimization step: 3839. Total energy = 1107 kcal/mol (1105 without restraints) Performing minimization step: 3840. Total energy = 1107 kcal/mol (1105 without restraints) Performing minimization step: 3841. Total energy = 1107 kcal/mol (1105 without restraints) Performing minimization step: 3842. Total energy = 1107 kcal/mol (1105 without restraints) Performing minimization step: 3843. Total energy = 1107 kcal/mol (1105 without restraints) Performing minimization step: 3844. Total energy = 1107 kcal/mol (1105 without restraints) Performing minimization step: 3845. Total energy = 1107 kcal/mol (1105 without restraints) Performing minimization step: 3846. Total energy = 1107 kcal/mol (1105 without restraints) Performing minimization step: 3847. Total energy = 1107 kcal/mol (1105 without restraints) Performing minimization step: 3848. Total energy = 1107 kcal/mol (1105 without restraints) Performing minimization step: 3849. Total energy = 1106 kcal/mol (1105 without restraints) Performing minimization step: 3850. Total energy = 1106 kcal/mol (1105 without restraints) Performing minimization step: 3851. Total energy = 1106 kcal/mol (1105 without restraints) Performing minimization step: 3852. Total energy = 1106 kcal/mol (1105 without restraints) Performing minimization step: 3853. Total energy = 1106 kcal/mol (1104 without restraints) Performing minimization step: 3854. Total energy = 1106 kcal/mol (1104 without restraints) Performing minimization step: 3855. Total energy = 1106 kcal/mol (1104 without restraints) Performing minimization step: 3856. Total energy = 1106 kcal/mol (1104 without restraints) Performing minimization step: 3857. Total energy = 1106 kcal/mol (1104 without restraints) Performing minimization step: 3858. Total energy = 1106 kcal/mol (1104 without restraints) Performing minimization step: 3859. Total energy = 1106 kcal/mol (1104 without restraints) Performing minimization step: 3860. Total energy = 1106 kcal/mol (1104 without restraints) Performing minimization step: 3861. Total energy = 1106 kcal/mol (1104 without restraints) Performing minimization step: 3862. Total energy = 1106 kcal/mol (1104 without restraints) Performing minimization step: 3863. Total energy = 1106 kcal/mol (1104 without restraints) Performing minimization step: 3864. Total energy = 1106 kcal/mol (1104 without restraints) Performing minimization step: 3865. Total energy = 1106 kcal/mol (1104 without restraints) Performing minimization step: 3866. Total energy = 1106 kcal/mol (1104 without restraints) Performing minimization step: 3867. Total energy = 1106 kcal/mol (1104 without restraints) Performing minimization step: 3868. Total energy = 1106 kcal/mol (1104 without restraints) Performing minimization step: 3869. Total energy = 1106 kcal/mol (1104 without restraints) Performing minimization step: 3870. Total energy = 1106 kcal/mol (1104 without restraints) Performing minimization step: 3871. Total energy = 1106 kcal/mol (1104 without restraints) Performing minimization step: 3872. Total energy = 1106 kcal/mol (1104 without restraints) Performing minimization step: 3873. Total energy = 1106 kcal/mol (1104 without restraints) Performing minimization step: 3874. Total energy = 1106 kcal/mol (1104 without restraints) Performing minimization step: 3875. Total energy = 1106 kcal/mol (1104 without restraints) Performing minimization step: 3876. Total energy = 1106 kcal/mol (1104 without restraints) Performing minimization step: 3877. Total energy = 1105 kcal/mol (1104 without restraints) Performing minimization step: 3878. Total energy = 1105 kcal/mol (1104 without restraints) Performing minimization step: 3879. Total energy = 1105 kcal/mol (1104 without restraints) Performing minimization step: 3880. Total energy = 1105 kcal/mol (1104 without restraints) Performing minimization step: 3881. Total energy = 1105 kcal/mol (1103 without restraints) Performing minimization step: 3882. Total energy = 1105 kcal/mol (1103 without restraints) Performing minimization step: 3883. Total energy = 1105 kcal/mol (1103 without restraints) Performing minimization step: 3884. Total energy = 1105 kcal/mol (1103 without restraints) Performing minimization step: 3885. Total energy = 1105 kcal/mol (1103 without restraints) Performing minimization step: 3886. Total energy = 1105 kcal/mol (1103 without restraints) Performing minimization step: 3887. Total energy = 1105 kcal/mol (1103 without restraints) Performing minimization step: 3888. Total energy = 1105 kcal/mol (1103 without restraints) Performing minimization step: 3889. Total energy = 1105 kcal/mol (1103 without restraints) Performing minimization step: 3890. Total energy = 1105 kcal/mol (1103 without restraints) Performing minimization step: 3891. Total energy = 1105 kcal/mol (1103 without restraints) Performing minimization step: 3892. Total energy = 1105 kcal/mol (1103 without restraints) Performing minimization step: 3893. Total energy = 1105 kcal/mol (1103 without restraints) Performing minimization step: 3894. Total energy = 1105 kcal/mol (1103 without restraints) Performing minimization step: 3895. Total energy = 1105 kcal/mol (1103 without restraints) Performing minimization step: 3896. Total energy = 1105 kcal/mol (1103 without restraints) Performing minimization step: 3897. Total energy = 1105 kcal/mol (1103 without restraints) Performing minimization step: 3898. Total energy = 1105 kcal/mol (1103 without restraints) Performing minimization step: 3899. Total energy = 1105 kcal/mol (1103 without restraints) Performing minimization step: 3900. Total energy = 1105 kcal/mol (1103 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/90a3fe85/tmp/apt_refx/apt_refx.pdb ...Done. Performing minimization step: 3901. Total energy = 1105 kcal/mol (1103 without restraints) Performing minimization step: 3902. Total energy = 1105 kcal/mol (1103 without restraints) Performing minimization step: 3903. Total energy = 1105 kcal/mol (1103 without restraints) Performing minimization step: 3904. Total energy = 1105 kcal/mol (1103 without restraints) Performing minimization step: 3905. Total energy = 1105 kcal/mol (1103 without restraints) Performing minimization step: 3906. Total energy = 1104 kcal/mol (1103 without restraints) Performing minimization step: 3907. Total energy = 1104 kcal/mol (1103 without restraints) Performing minimization step: 3908. Total energy = 1104 kcal/mol (1103 without restraints) Performing minimization step: 3909. Total energy = 1104 kcal/mol (1103 without restraints) Performing minimization step: 3910. Total energy = 1104 kcal/mol (1102 without restraints) Performing minimization step: 3911. Total energy = 1104 kcal/mol (1102 without restraints) Performing minimization step: 3912. Total energy = 1104 kcal/mol (1102 without restraints) Performing minimization step: 3913. Total energy = 1104 kcal/mol (1102 without restraints) Performing minimization step: 3914. Total energy = 1104 kcal/mol (1102 without restraints) Performing minimization step: 3915. Total energy = 1104 kcal/mol (1102 without restraints) Performing minimization step: 3916. Total energy = 1104 kcal/mol (1102 without restraints) Performing minimization step: 3917. Total energy = 1104 kcal/mol (1102 without restraints) Performing minimization step: 3918. Total energy = 1104 kcal/mol (1102 without restraints) Performing minimization step: 3919. Total energy = 1104 kcal/mol (1102 without restraints) Performing minimization step: 3920. Total energy = 1104 kcal/mol (1102 without restraints) Performing minimization step: 3921. Total energy = 1104 kcal/mol (1102 without restraints) Performing minimization step: 3922. Total energy = 1104 kcal/mol (1102 without restraints) Performing minimization step: 3923. Total energy = 1104 kcal/mol (1102 without restraints) Performing minimization step: 3924. Total energy = 1104 kcal/mol (1102 without restraints) Performing minimization step: 3925. Total energy = 1104 kcal/mol (1102 without restraints) Performing minimization step: 3926. Total energy = 1104 kcal/mol (1102 without restraints) Performing minimization step: 3927. Total energy = 1104 kcal/mol (1102 without restraints) Performing minimization step: 3928. Total energy = 1104 kcal/mol (1102 without restraints) Performing minimization step: 3929. Total energy = 1104 kcal/mol (1102 without restraints) Performing minimization step: 3930. Total energy = 1104 kcal/mol (1102 without restraints) Performing minimization step: 3931. Total energy = 1104 kcal/mol (1102 without restraints) Performing minimization step: 3932. Total energy = 1104 kcal/mol (1102 without restraints) Performing minimization step: 3933. Total energy = 1104 kcal/mol (1102 without restraints) Performing minimization step: 3934. Total energy = 1104 kcal/mol (1102 without restraints) Performing minimization step: 3935. Total energy = 1103 kcal/mol (1102 without restraints) Performing minimization step: 3936. Total energy = 1103 kcal/mol (1102 without restraints) Performing minimization step: 3937. Total energy = 1103 kcal/mol (1102 without restraints) Performing minimization step: 3938. Total energy = 1103 kcal/mol (1102 without restraints) Performing minimization step: 3939. Total energy = 1103 kcal/mol (1101 without restraints) Performing minimization step: 3940. Total energy = 1103 kcal/mol (1101 without restraints) Performing minimization step: 3941. Total energy = 1103 kcal/mol (1101 without restraints) Performing minimization step: 3942. Total energy = 1103 kcal/mol (1101 without restraints) Performing minimization step: 3943. Total energy = 1103 kcal/mol (1101 without restraints) Performing minimization step: 3944. Total energy = 1103 kcal/mol (1101 without restraints) Performing minimization step: 3945. Total energy = 1103 kcal/mol (1101 without restraints) Performing minimization step: 3946. Total energy = 1103 kcal/mol (1101 without restraints) Performing minimization step: 3947. Total energy = 1103 kcal/mol (1101 without restraints) Performing minimization step: 3948. Total energy = 1103 kcal/mol (1101 without restraints) Performing minimization step: 3949. Total energy = 1103 kcal/mol (1101 without restraints) Performing minimization step: 3950. Total energy = 1103 kcal/mol (1101 without restraints) Performing minimization step: 3951. Total energy = 1103 kcal/mol (1101 without restraints) Performing minimization step: 3952. Total energy = 1103 kcal/mol (1101 without restraints) Performing minimization step: 3953. Total energy = 1103 kcal/mol (1101 without restraints) Performing minimization step: 3954. Total energy = 1103 kcal/mol (1101 without restraints) Performing minimization step: 3955. Total energy = 1103 kcal/mol (1101 without restraints) Performing minimization step: 3956. Total energy = 1103 kcal/mol (1101 without restraints) Performing minimization step: 3957. Total energy = 1103 kcal/mol (1101 without restraints) Performing minimization step: 3958. Total energy = 1103 kcal/mol (1101 without restraints) Performing minimization step: 3959. Total energy = 1103 kcal/mol (1101 without restraints) Performing minimization step: 3960. Total energy = 1103 kcal/mol (1101 without restraints) Performing minimization step: 3961. Total energy = 1103 kcal/mol (1101 without restraints) Performing minimization step: 3962. Total energy = 1103 kcal/mol (1101 without restraints) Performing minimization step: 3963. Total energy = 1103 kcal/mol (1101 without restraints) Performing minimization step: 3964. Total energy = 1102 kcal/mol (1101 without restraints) Performing minimization step: 3965. Total energy = 1102 kcal/mol (1101 without restraints) Performing minimization step: 3966. Total energy = 1102 kcal/mol (1101 without restraints) Performing minimization step: 3967. Total energy = 1102 kcal/mol (1101 without restraints) Performing minimization step: 3968. Total energy = 1102 kcal/mol (1100 without restraints) Performing minimization step: 3969. Total energy = 1102 kcal/mol (1100 without restraints) Performing minimization step: 3970. Total energy = 1102 kcal/mol (1100 without restraints) Performing minimization step: 3971. Total energy = 1102 kcal/mol (1100 without restraints) Performing minimization step: 3972. Total energy = 1102 kcal/mol (1100 without restraints) Performing minimization step: 3973. Total energy = 1102 kcal/mol (1100 without restraints) Performing minimization step: 3974. Total energy = 1102 kcal/mol (1100 without restraints) Performing minimization step: 3975. Total energy = 1102 kcal/mol (1100 without restraints) Performing minimization step: 3976. Total energy = 1102 kcal/mol (1100 without restraints) Performing minimization step: 3977. Total energy = 1102 kcal/mol (1100 without restraints) Performing minimization step: 3978. Total energy = 1102 kcal/mol (1100 without restraints) Performing minimization step: 3979. Total energy = 1102 kcal/mol (1100 without restraints) Performing minimization step: 3980. Total energy = 1102 kcal/mol (1100 without restraints) Performing minimization step: 3981. Total energy = 1102 kcal/mol (1100 without restraints) Performing minimization step: 3982. Total energy = 1102 kcal/mol (1100 without restraints) Performing minimization step: 3983. Total energy = 1102 kcal/mol (1100 without restraints) Performing minimization step: 3984. Total energy = 1102 kcal/mol (1100 without restraints) Performing minimization step: 3985. Total energy = 1102 kcal/mol (1100 without restraints) Performing minimization step: 3986. Total energy = 1102 kcal/mol (1100 without restraints) Performing minimization step: 3987. Total energy = 1102 kcal/mol (1100 without restraints) Performing minimization step: 3988. Total energy = 1102 kcal/mol (1100 without restraints) Performing minimization step: 3989. Total energy = 1102 kcal/mol (1100 without restraints) Performing minimization step: 3990. Total energy = 1102 kcal/mol (1100 without restraints) Performing minimization step: 3991. Total energy = 1102 kcal/mol (1100 without restraints) Performing minimization step: 3992. Total energy = 1102 kcal/mol (1100 without restraints) Performing minimization step: 3993. Total energy = 1102 kcal/mol (1100 without restraints) Performing minimization step: 3994. Total energy = 1101 kcal/mol (1100 without restraints) Performing minimization step: 3995. Total energy = 1101 kcal/mol (1100 without restraints) Performing minimization step: 3996. Total energy = 1101 kcal/mol (1100 without restraints) Performing minimization step: 3997. Total energy = 1101 kcal/mol (1100 without restraints) Performing minimization step: 3998. Total energy = 1101 kcal/mol (1099 without restraints) Performing minimization step: 3999. Total energy = 1101 kcal/mol (1099 without restraints) Performing minimization step: 4000. Total energy = 1101 kcal/mol (1099 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/90a3fe85/tmp/apt_refx/apt_refx.pdb ...Done. Performing minimization step: 4001. Total energy = 1101 kcal/mol (1099 without restraints) Performing minimization step: 4002. Total energy = 1101 kcal/mol (1099 without restraints) Performing minimization step: 4003. Total energy = 1101 kcal/mol (1099 without restraints) Performing minimization step: 4004. Total energy = 1101 kcal/mol (1099 without restraints) Performing minimization step: 4005. Total energy = 1101 kcal/mol (1099 without restraints) Performing minimization step: 4006. Total energy = 1101 kcal/mol (1099 without restraints) Performing minimization step: 4007. Total energy = 1101 kcal/mol (1099 without restraints) Performing minimization step: 4008. Total energy = 1101 kcal/mol (1099 without restraints) Performing minimization step: 4009. Total energy = 1101 kcal/mol (1099 without restraints) Performing minimization step: 4010. Total energy = 1101 kcal/mol (1099 without restraints) Performing minimization step: 4011. Total energy = 1101 kcal/mol (1099 without restraints) Performing minimization step: 4012. Total energy = 1101 kcal/mol (1099 without restraints) Performing minimization step: 4013. Total energy = 1101 kcal/mol (1099 without restraints) Performing minimization step: 4014. Total energy = 1101 kcal/mol (1099 without restraints) Performing minimization step: 4015. Total energy = 1101 kcal/mol (1099 without restraints) Performing minimization step: 4016. Total energy = 1101 kcal/mol (1099 without restraints) Performing minimization step: 4017. Total energy = 1101 kcal/mol (1099 without restraints) Performing minimization step: 4018. Total energy = 1101 kcal/mol (1099 without restraints) Performing minimization step: 4019. Total energy = 1101 kcal/mol (1099 without restraints) Performing minimization step: 4020. Total energy = 1101 kcal/mol (1099 without restraints) Performing minimization step: 4021. Total energy = 1101 kcal/mol (1099 without restraints) Performing minimization step: 4022. Total energy = 1101 kcal/mol (1099 without restraints) Performing minimization step: 4023. Total energy = 1101 kcal/mol (1099 without restraints) Performing minimization step: 4024. Total energy = 1100 kcal/mol (1099 without restraints) Performing minimization step: 4025. Total energy = 1100 kcal/mol (1099 without restraints) Performing minimization step: 4026. Total energy = 1100 kcal/mol (1099 without restraints) Performing minimization step: 4027. Total energy = 1100 kcal/mol (1099 without restraints) Performing minimization step: 4028. Total energy = 1100 kcal/mol (1098 without restraints) Performing minimization step: 4029. Total energy = 1100 kcal/mol (1098 without restraints) Performing minimization step: 4030. Total energy = 1100 kcal/mol (1098 without restraints) Performing minimization step: 4031. Total energy = 1100 kcal/mol (1098 without restraints) Performing minimization step: 4032. Total energy = 1100 kcal/mol (1098 without restraints) Performing minimization step: 4033. Total energy = 1100 kcal/mol (1098 without restraints) Performing minimization step: 4034. Total energy = 1100 kcal/mol (1098 without restraints) Performing minimization step: 4035. Total energy = 1100 kcal/mol (1098 without restraints) Performing minimization step: 4036. Total energy = 1100 kcal/mol (1098 without restraints) Performing minimization step: 4037. Total energy = 1100 kcal/mol (1098 without restraints) Performing minimization step: 4038. Total energy = 1100 kcal/mol (1098 without restraints) Performing minimization step: 4039. Total energy = 1100 kcal/mol (1098 without restraints) Performing minimization step: 4040. Total energy = 1100 kcal/mol (1098 without restraints) Performing minimization step: 4041. Total energy = 1100 kcal/mol (1098 without restraints) Performing minimization step: 4042. Total energy = 1100 kcal/mol (1098 without restraints) Performing minimization step: 4043. Total energy = 1100 kcal/mol (1098 without restraints) Performing minimization step: 4044. Total energy = 1100 kcal/mol (1098 without restraints) Performing minimization step: 4045. Total energy = 1100 kcal/mol (1098 without restraints) Performing minimization step: 4046. Total energy = 1100 kcal/mol (1098 without restraints) Performing minimization step: 4047. Total energy = 1100 kcal/mol (1098 without restraints) Performing minimization step: 4048. Total energy = 1100 kcal/mol (1098 without restraints) Performing minimization step: 4049. Total energy = 1100 kcal/mol (1098 without restraints) Performing minimization step: 4050. Total energy = 1100 kcal/mol (1098 without restraints) Performing minimization step: 4051. Total energy = 1100 kcal/mol (1098 without restraints) Performing minimization step: 4052. Total energy = 1100 kcal/mol (1098 without restraints) Performing minimization step: 4053. Total energy = 1100 kcal/mol (1098 without restraints) Performing minimization step: 4054. Total energy = 1100 kcal/mol (1098 without restraints) Performing minimization step: 4055. Total energy = 1099 kcal/mol (1098 without restraints) Performing minimization step: 4056. Total energy = 1099 kcal/mol (1098 without restraints) Performing minimization step: 4057. Total energy = 1099 kcal/mol (1098 without restraints) Performing minimization step: 4058. Total energy = 1099 kcal/mol (1097 without restraints) Performing minimization step: 4059. Total energy = 1099 kcal/mol (1097 without restraints) Performing minimization step: 4060. Total energy = 1099 kcal/mol (1097 without restraints) Performing minimization step: 4061. Total energy = 1099 kcal/mol (1097 without restraints) Performing minimization step: 4062. Total energy = 1099 kcal/mol (1097 without restraints) Performing minimization step: 4063. Total energy = 1099 kcal/mol (1097 without restraints) Performing minimization step: 4064. Total energy = 1099 kcal/mol (1097 without restraints) Performing minimization step: 4065. Total energy = 1099 kcal/mol (1097 without restraints) Performing minimization step: 4066. Total energy = 1099 kcal/mol (1097 without restraints) Performing minimization step: 4067. Total energy = 1099 kcal/mol (1097 without restraints) Performing minimization step: 4068. Total energy = 1099 kcal/mol (1097 without restraints) Performing minimization step: 4069. Total energy = 1099 kcal/mol (1097 without restraints) Performing minimization step: 4070. Total energy = 1099 kcal/mol (1097 without restraints) Performing minimization step: 4071. Total energy = 1099 kcal/mol (1097 without restraints) Performing minimization step: 4072. Total energy = 1099 kcal/mol (1097 without restraints) Performing minimization step: 4073. Total energy = 1099 kcal/mol (1097 without restraints) Performing minimization step: 4074. Total energy = 1099 kcal/mol (1097 without restraints) Performing minimization step: 4075. Total energy = 1099 kcal/mol (1097 without restraints) Performing minimization step: 4076. Total energy = 1099 kcal/mol (1097 without restraints) Performing minimization step: 4077. Total energy = 1099 kcal/mol (1097 without restraints) Performing minimization step: 4078. Total energy = 1099 kcal/mol (1097 without restraints) Performing minimization step: 4079. Total energy = 1099 kcal/mol (1097 without restraints) Performing minimization step: 4080. Total energy = 1099 kcal/mol (1097 without restraints) Performing minimization step: 4081. Total energy = 1099 kcal/mol (1097 without restraints) Performing minimization step: 4082. Total energy = 1099 kcal/mol (1097 without restraints) Performing minimization step: 4083. Total energy = 1099 kcal/mol (1097 without restraints) Performing minimization step: 4084. Total energy = 1099 kcal/mol (1097 without restraints) Performing minimization step: 4085. Total energy = 1098 kcal/mol (1097 without restraints) Performing minimization step: 4086. Total energy = 1098 kcal/mol (1097 without restraints) Performing minimization step: 4087. Total energy = 1098 kcal/mol (1097 without restraints) Performing minimization step: 4088. Total energy = 1098 kcal/mol (1097 without restraints) Performing minimization step: 4089. Total energy = 1098 kcal/mol (1096 without restraints) Performing minimization step: 4090. Total energy = 1098 kcal/mol (1096 without restraints) Performing minimization step: 4091. Total energy = 1098 kcal/mol (1096 without restraints) Performing minimization step: 4092. Total energy = 1098 kcal/mol (1096 without restraints) Performing minimization step: 4093. Total energy = 1098 kcal/mol (1096 without restraints) Performing minimization step: 4094. Total energy = 1098 kcal/mol (1096 without restraints) Performing minimization step: 4095. Total energy = 1098 kcal/mol (1096 without restraints) Performing minimization step: 4096. Total energy = 1098 kcal/mol (1096 without restraints) Performing minimization step: 4097. Total energy = 1098 kcal/mol (1096 without restraints) Performing minimization step: 4098. Total energy = 1098 kcal/mol (1096 without restraints) Performing minimization step: 4099. Total energy = 1098 kcal/mol (1096 without restraints) Performing minimization step: 4100. Total energy = 1098 kcal/mol (1096 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/90a3fe85/tmp/apt_refx/apt_refx.pdb ...Done. Performing minimization step: 4101. Total energy = 1098 kcal/mol (1096 without restraints) Performing minimization step: 4102. Total energy = 1098 kcal/mol (1096 without restraints) Performing minimization step: 4103. Total energy = 1098 kcal/mol (1096 without restraints) Performing minimization step: 4104. Total energy = 1098 kcal/mol (1096 without restraints) Performing minimization step: 4105. Total energy = 1098 kcal/mol (1096 without restraints) Performing minimization step: 4106. Total energy = 1098 kcal/mol (1096 without restraints) Performing minimization step: 4107. Total energy = 1098 kcal/mol (1096 without restraints) Performing minimization step: 4108. Total energy = 1098 kcal/mol (1096 without restraints) Performing minimization step: 4109. Total energy = 1098 kcal/mol (1096 without restraints) Performing minimization step: 4110. Total energy = 1098 kcal/mol (1096 without restraints) Performing minimization step: 4111. Total energy = 1098 kcal/mol (1096 without restraints) Performing minimization step: 4112. Total energy = 1098 kcal/mol (1096 without restraints) Performing minimization step: 4113. Total energy = 1098 kcal/mol (1096 without restraints) Performing minimization step: 4114. Total energy = 1098 kcal/mol (1096 without restraints) Performing minimization step: 4115. Total energy = 1098 kcal/mol (1096 without restraints) Performing minimization step: 4116. Total energy = 1098 kcal/mol (1096 without restraints) Performing minimization step: 4117. Total energy = 1097 kcal/mol (1096 without restraints) Performing minimization step: 4118. Total energy = 1097 kcal/mol (1096 without restraints) Performing minimization step: 4119. Total energy = 1097 kcal/mol (1096 without restraints) Performing minimization step: 4120. Total energy = 1097 kcal/mol (1095 without restraints) Performing minimization step: 4121. Total energy = 1097 kcal/mol (1095 without restraints) Performing minimization step: 4122. Total energy = 1097 kcal/mol (1095 without restraints) Performing minimization step: 4123. Total energy = 1097 kcal/mol (1095 without restraints) Performing minimization step: 4124. Total energy = 1097 kcal/mol (1095 without restraints) Performing minimization step: 4125. Total energy = 1097 kcal/mol (1095 without restraints) Performing minimization step: 4126. Total energy = 1097 kcal/mol (1095 without restraints) Performing minimization step: 4127. Total energy = 1097 kcal/mol (1095 without restraints) Performing minimization step: 4128. Total energy = 1097 kcal/mol (1095 without restraints) Performing minimization step: 4129. Total energy = 1097 kcal/mol (1095 without restraints) Performing minimization step: 4130. Total energy = 1097 kcal/mol (1095 without restraints) Performing minimization step: 4131. Total energy = 1097 kcal/mol (1095 without restraints) Performing minimization step: 4132. Total energy = 1097 kcal/mol (1095 without restraints) Performing minimization step: 4133. Total energy = 1097 kcal/mol (1095 without restraints) Performing minimization step: 4134. Total energy = 1097 kcal/mol (1095 without restraints) Performing minimization step: 4135. Total energy = 1097 kcal/mol (1095 without restraints) Performing minimization step: 4136. Total energy = 1097 kcal/mol (1095 without restraints) Performing minimization step: 4137. Total energy = 1097 kcal/mol (1095 without restraints) Performing minimization step: 4138. Total energy = 1097 kcal/mol (1095 without restraints) Performing minimization step: 4139. Total energy = 1097 kcal/mol (1095 without restraints) Performing minimization step: 4140. Total energy = 1097 kcal/mol (1095 without restraints) Performing minimization step: 4141. Total energy = 1097 kcal/mol (1095 without restraints) Performing minimization step: 4142. Total energy = 1097 kcal/mol (1095 without restraints) Performing minimization step: 4143. Total energy = 1097 kcal/mol (1095 without restraints) Performing minimization step: 4144. Total energy = 1097 kcal/mol (1095 without restraints) Performing minimization step: 4145. Total energy = 1097 kcal/mol (1095 without restraints) Performing minimization step: 4146. Total energy = 1097 kcal/mol (1095 without restraints) Performing minimization step: 4147. Total energy = 1097 kcal/mol (1095 without restraints) Performing minimization step: 4148. Total energy = 1097 kcal/mol (1095 without restraints) Performing minimization step: 4149. Total energy = 1096 kcal/mol (1095 without restraints) Performing minimization step: 4150. Total energy = 1096 kcal/mol (1095 without restraints) Performing minimization step: 4151. Total energy = 1096 kcal/mol (1095 without restraints) Performing minimization step: 4152. Total energy = 1096 kcal/mol (1094 without restraints) Performing minimization step: 4153. Total energy = 1096 kcal/mol (1094 without restraints) Performing minimization step: 4154. Total energy = 1096 kcal/mol (1094 without restraints) Performing minimization step: 4155. Total energy = 1096 kcal/mol (1094 without restraints) Performing minimization step: 4156. Total energy = 1096 kcal/mol (1094 without restraints) Performing minimization step: 4157. Total energy = 1096 kcal/mol (1094 without restraints) Performing minimization step: 4158. Total energy = 1096 kcal/mol (1094 without restraints) Performing minimization step: 4159. Total energy = 1096 kcal/mol (1094 without restraints) Performing minimization step: 4160. Total energy = 1096 kcal/mol (1094 without restraints) Performing minimization step: 4161. Total energy = 1096 kcal/mol (1094 without restraints) Performing minimization step: 4162. Total energy = 1096 kcal/mol (1094 without restraints) Performing minimization step: 4163. Total energy = 1096 kcal/mol (1094 without restraints) Performing minimization step: 4164. Total energy = 1096 kcal/mol (1094 without restraints) Performing minimization step: 4165. Total energy = 1096 kcal/mol (1094 without restraints) Performing minimization step: 4166. Total energy = 1096 kcal/mol (1094 without restraints) Performing minimization step: 4167. Total energy = 1096 kcal/mol (1094 without restraints) Performing minimization step: 4168. Total energy = 1096 kcal/mol (1094 without restraints) Performing minimization step: 4169. Total energy = 1096 kcal/mol (1094 without restraints) Performing minimization step: 4170. Total energy = 1096 kcal/mol (1094 without restraints) Performing minimization step: 4171. Total energy = 1096 kcal/mol (1094 without restraints) Performing minimization step: 4172. Total energy = 1096 kcal/mol (1094 without restraints) Performing minimization step: 4173. Total energy = 1096 kcal/mol (1094 without restraints) Performing minimization step: 4174. Total energy = 1096 kcal/mol (1094 without restraints) Performing minimization step: 4175. Total energy = 1096 kcal/mol (1094 without restraints) Performing minimization step: 4176. Total energy = 1096 kcal/mol (1094 without restraints) Performing minimization step: 4177. Total energy = 1096 kcal/mol (1094 without restraints) Performing minimization step: 4178. Total energy = 1096 kcal/mol (1094 without restraints) Performing minimization step: 4179. Total energy = 1096 kcal/mol (1094 without restraints) Performing minimization step: 4180. Total energy = 1096 kcal/mol (1094 without restraints) Performing minimization step: 4181. Total energy = 1095 kcal/mol (1094 without restraints) Performing minimization step: 4182. Total energy = 1095 kcal/mol (1094 without restraints) Performing minimization step: 4183. Total energy = 1095 kcal/mol (1094 without restraints) Performing minimization step: 4184. Total energy = 1095 kcal/mol (1093 without restraints) Performing minimization step: 4185. Total energy = 1095 kcal/mol (1093 without restraints) Performing minimization step: 4186. Total energy = 1095 kcal/mol (1093 without restraints) Performing minimization step: 4187. Total energy = 1095 kcal/mol (1093 without restraints) Performing minimization step: 4188. Total energy = 1095 kcal/mol (1093 without restraints) Performing minimization step: 4189. Total energy = 1095 kcal/mol (1093 without restraints) Performing minimization step: 4190. Total energy = 1095 kcal/mol (1093 without restraints) Performing minimization step: 4191. Total energy = 1095 kcal/mol (1093 without restraints) Performing minimization step: 4192. Total energy = 1095 kcal/mol (1093 without restraints) Performing minimization step: 4193. Total energy = 1095 kcal/mol (1093 without restraints) Performing minimization step: 4194. Total energy = 1095 kcal/mol (1093 without restraints) Performing minimization step: 4195. Total energy = 1095 kcal/mol (1093 without restraints) Performing minimization step: 4196. Total energy = 1095 kcal/mol (1093 without restraints) Performing minimization step: 4197. Total energy = 1095 kcal/mol (1093 without restraints) Performing minimization step: 4198. Total energy = 1095 kcal/mol (1093 without restraints) Performing minimization step: 4199. Total energy = 1095 kcal/mol (1093 without restraints) Performing minimization step: 4200. Total energy = 1095 kcal/mol (1093 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/90a3fe85/tmp/apt_refx/apt_refx.pdb ...Done. Performing minimization step: 4201. Total energy = 1095 kcal/mol (1093 without restraints) Performing minimization step: 4202. Total energy = 1095 kcal/mol (1093 without restraints) Performing minimization step: 4203. Total energy = 1095 kcal/mol (1093 without restraints) Performing minimization step: 4204. Total energy = 1095 kcal/mol (1093 without restraints) Performing minimization step: 4205. Total energy = 1095 kcal/mol (1093 without restraints) Performing minimization step: 4206. Total energy = 1095 kcal/mol (1093 without restraints) Performing minimization step: 4207. Total energy = 1095 kcal/mol (1093 without restraints) Performing minimization step: 4208. Total energy = 1095 kcal/mol (1093 without restraints) Performing minimization step: 4209. Total energy = 1095 kcal/mol (1093 without restraints) Performing minimization step: 4210. Total energy = 1095 kcal/mol (1093 without restraints) Performing minimization step: 4211. Total energy = 1095 kcal/mol (1093 without restraints) Performing minimization step: 4212. Total energy = 1095 kcal/mol (1093 without restraints) Performing minimization step: 4213. Total energy = 1095 kcal/mol (1093 without restraints) Performing minimization step: 4214. Total energy = 1094 kcal/mol (1093 without restraints) Performing minimization step: 4215. Total energy = 1094 kcal/mol (1093 without restraints) Performing minimization step: 4216. Total energy = 1094 kcal/mol (1093 without restraints) Performing minimization step: 4217. Total energy = 1094 kcal/mol (1092 without restraints) Performing minimization step: 4218. Total energy = 1094 kcal/mol (1092 without restraints) Performing minimization step: 4219. Total energy = 1094 kcal/mol (1092 without restraints) Performing minimization step: 4220. Total energy = 1094 kcal/mol (1092 without restraints) Performing minimization step: 4221. Total energy = 1094 kcal/mol (1092 without restraints) Performing minimization step: 4222. Total energy = 1094 kcal/mol (1092 without restraints) Performing minimization step: 4223. Total energy = 1094 kcal/mol (1092 without restraints) Performing minimization step: 4224. Total energy = 1094 kcal/mol (1092 without restraints) Performing minimization step: 4225. Total energy = 1094 kcal/mol (1092 without restraints) Performing minimization step: 4226. Total energy = 1094 kcal/mol (1092 without restraints) Performing minimization step: 4227. Total energy = 1094 kcal/mol (1092 without restraints) Performing minimization step: 4228. Total energy = 1094 kcal/mol (1092 without restraints) Performing minimization step: 4229. Total energy = 1094 kcal/mol (1092 without restraints) Performing minimization step: 4230. Total energy = 1094 kcal/mol (1092 without restraints) Performing minimization step: 4231. Total energy = 1094 kcal/mol (1092 without restraints) Performing minimization step: 4232. Total energy = 1094 kcal/mol (1092 without restraints) Performing minimization step: 4233. Total energy = 1094 kcal/mol (1092 without restraints) Performing minimization step: 4234. Total energy = 1094 kcal/mol (1092 without restraints) Performing minimization step: 4235. Total energy = 1094 kcal/mol (1092 without restraints) Performing minimization step: 4236. Total energy = 1094 kcal/mol (1092 without restraints) Performing minimization step: 4237. Total energy = 1094 kcal/mol (1092 without restraints) Performing minimization step: 4238. Total energy = 1094 kcal/mol (1092 without restraints) Performing minimization step: 4239. Total energy = 1094 kcal/mol (1092 without restraints) Performing minimization step: 4240. Total energy = 1094 kcal/mol (1092 without restraints) Performing minimization step: 4241. Total energy = 1094 kcal/mol (1092 without restraints) Performing minimization step: 4242. Total energy = 1094 kcal/mol (1092 without restraints) Performing minimization step: 4243. Total energy = 1094 kcal/mol (1092 without restraints) Performing minimization step: 4244. Total energy = 1094 kcal/mol (1092 without restraints) Performing minimization step: 4245. Total energy = 1094 kcal/mol (1092 without restraints) Performing minimization step: 4246. Total energy = 1094 kcal/mol (1092 without restraints) Performing minimization step: 4247. Total energy = 1093 kcal/mol (1092 without restraints) Performing minimization step: 4248. Total energy = 1093 kcal/mol (1092 without restraints) Performing minimization step: 4249. Total energy = 1093 kcal/mol (1092 without restraints) Performing minimization step: 4250. Total energy = 1093 kcal/mol (1091 without restraints) Performing minimization step: 4251. Total energy = 1093 kcal/mol (1091 without restraints) Performing minimization step: 4252. Total energy = 1093 kcal/mol (1091 without restraints) Performing minimization step: 4253. Total energy = 1093 kcal/mol (1091 without restraints) Performing minimization step: 4254. Total energy = 1093 kcal/mol (1091 without restraints) Performing minimization step: 4255. Total energy = 1093 kcal/mol (1091 without restraints) Performing minimization step: 4256. Total energy = 1093 kcal/mol (1091 without restraints) Performing minimization step: 4257. Total energy = 1093 kcal/mol (1091 without restraints) Performing minimization step: 4258. Total energy = 1093 kcal/mol (1091 without restraints) Performing minimization step: 4259. Total energy = 1093 kcal/mol (1091 without restraints) Performing minimization step: 4260. Total energy = 1093 kcal/mol (1091 without restraints) Performing minimization step: 4261. Total energy = 1093 kcal/mol (1091 without restraints) Performing minimization step: 4262. Total energy = 1093 kcal/mol (1091 without restraints) Performing minimization step: 4263. Total energy = 1093 kcal/mol (1091 without restraints) Performing minimization step: 4264. Total energy = 1093 kcal/mol (1091 without restraints) Performing minimization step: 4265. Total energy = 1093 kcal/mol (1091 without restraints) Performing minimization step: 4266. Total energy = 1093 kcal/mol (1091 without restraints) Performing minimization step: 4267. Total energy = 1093 kcal/mol (1091 without restraints) Performing minimization step: 4268. Total energy = 1093 kcal/mol (1091 without restraints) Performing minimization step: 4269. Total energy = 1093 kcal/mol (1091 without restraints) Performing minimization step: 4270. Total energy = 1093 kcal/mol (1091 without restraints) Performing minimization step: 4271. Total energy = 1093 kcal/mol (1091 without restraints) Performing minimization step: 4272. Total energy = 1093 kcal/mol (1091 without restraints) Performing minimization step: 4273. Total energy = 1093 kcal/mol (1091 without restraints) Performing minimization step: 4274. Total energy = 1093 kcal/mol (1091 without restraints) Performing minimization step: 4275. Total energy = 1093 kcal/mol (1091 without restraints) Performing minimization step: 4276. Total energy = 1093 kcal/mol (1091 without restraints) Performing minimization step: 4277. Total energy = 1093 kcal/mol (1091 without restraints) Performing minimization step: 4278. Total energy = 1093 kcal/mol (1091 without restraints) Performing minimization step: 4279. Total energy = 1093 kcal/mol (1091 without restraints) Performing minimization step: 4280. Total energy = 1092 kcal/mol (1091 without restraints) Performing minimization step: 4281. Total energy = 1092 kcal/mol (1091 without restraints) Performing minimization step: 4282. Total energy = 1092 kcal/mol (1091 without restraints) Performing minimization step: 4283. Total energy = 1092 kcal/mol (1090 without restraints) Performing minimization step: 4284. Total energy = 1092 kcal/mol (1090 without restraints) Performing minimization step: 4285. Total energy = 1092 kcal/mol (1090 without restraints) Performing minimization step: 4286. Total energy = 1092 kcal/mol (1090 without restraints) Performing minimization step: 4287. Total energy = 1092 kcal/mol (1090 without restraints) Performing minimization step: 4288. Total energy = 1092 kcal/mol (1090 without restraints) Performing minimization step: 4289. Total energy = 1092 kcal/mol (1090 without restraints) Performing minimization step: 4290. Total energy = 1092 kcal/mol (1090 without restraints) Performing minimization step: 4291. Total energy = 1092 kcal/mol (1090 without restraints) Performing minimization step: 4292. Total energy = 1092 kcal/mol (1090 without restraints) Performing minimization step: 4293. Total energy = 1092 kcal/mol (1090 without restraints) Performing minimization step: 4294. Total energy = 1092 kcal/mol (1090 without restraints) Performing minimization step: 4295. Total energy = 1092 kcal/mol (1090 without restraints) Performing minimization step: 4296. Total energy = 1092 kcal/mol (1090 without restraints) Performing minimization step: 4297. Total energy = 1092 kcal/mol (1090 without restraints) Performing minimization step: 4298. Total energy = 1092 kcal/mol (1090 without restraints) Performing minimization step: 4299. Total energy = 1092 kcal/mol (1090 without restraints) Performing minimization step: 4300. Total energy = 1092 kcal/mol (1090 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/90a3fe85/tmp/apt_refx/apt_refx.pdb ...Done. Performing minimization step: 4301. Total energy = 1092 kcal/mol (1090 without restraints) Performing minimization step: 4302. Total energy = 1092 kcal/mol (1090 without restraints) Performing minimization step: 4303. Total energy = 1092 kcal/mol (1090 without restraints) Performing minimization step: 4304. Total energy = 1092 kcal/mol (1090 without restraints) Performing minimization step: 4305. Total energy = 1092 kcal/mol (1090 without restraints) Performing minimization step: 4306. Total energy = 1092 kcal/mol (1090 without restraints) Performing minimization step: 4307. Total energy = 1092 kcal/mol (1090 without restraints) Performing minimization step: 4308. Total energy = 1092 kcal/mol (1090 without restraints) Performing minimization step: 4309. Total energy = 1092 kcal/mol (1090 without restraints) Performing minimization step: 4310. Total energy = 1092 kcal/mol (1090 without restraints) Performing minimization step: 4311. Total energy = 1092 kcal/mol (1090 without restraints) Performing minimization step: 4312. Total energy = 1092 kcal/mol (1090 without restraints) Performing minimization step: 4313. Total energy = 1092 kcal/mol (1090 without restraints) Performing minimization step: 4314. Total energy = 1091 kcal/mol (1090 without restraints) Performing minimization step: 4315. Total energy = 1091 kcal/mol (1090 without restraints) Performing minimization step: 4316. Total energy = 1091 kcal/mol (1090 without restraints) Performing minimization step: 4317. Total energy = 1091 kcal/mol (1089 without restraints) Performing minimization step: 4318. Total energy = 1091 kcal/mol (1089 without restraints) Performing minimization step: 4319. Total energy = 1091 kcal/mol (1089 without restraints) Performing minimization step: 4320. Total energy = 1091 kcal/mol (1089 without restraints) Performing minimization step: 4321. Total energy = 1091 kcal/mol (1089 without restraints) Performing minimization step: 4322. Total energy = 1091 kcal/mol (1089 without restraints) Performing minimization step: 4323. Total energy = 1091 kcal/mol (1089 without restraints) Performing minimization step: 4324. Total energy = 1091 kcal/mol (1089 without restraints) Performing minimization step: 4325. Total energy = 1091 kcal/mol (1089 without restraints) Performing minimization step: 4326. Total energy = 1091 kcal/mol (1089 without restraints) Performing minimization step: 4327. Total energy = 1091 kcal/mol (1089 without restraints) Performing minimization step: 4328. Total energy = 1091 kcal/mol (1089 without restraints) Performing minimization step: 4329. Total energy = 1091 kcal/mol (1089 without restraints) Performing minimization step: 4330. Total energy = 1091 kcal/mol (1089 without restraints) Performing minimization step: 4331. Total energy = 1091 kcal/mol (1089 without restraints) Performing minimization step: 4332. Total energy = 1091 kcal/mol (1089 without restraints) Performing minimization step: 4333. Total energy = 1091 kcal/mol (1089 without restraints) Performing minimization step: 4334. Total energy = 1091 kcal/mol (1089 without restraints) Performing minimization step: 4335. Total energy = 1091 kcal/mol (1089 without restraints) Performing minimization step: 4336. Total energy = 1091 kcal/mol (1089 without restraints) Performing minimization step: 4337. Total energy = 1091 kcal/mol (1089 without restraints) Performing minimization step: 4338. Total energy = 1091 kcal/mol (1089 without restraints) Performing minimization step: 4339. Total energy = 1091 kcal/mol (1089 without restraints) Performing minimization step: 4340. Total energy = 1091 kcal/mol (1089 without restraints) Performing minimization step: 4341. Total energy = 1091 kcal/mol (1089 without restraints) Performing minimization step: 4342. Total energy = 1091 kcal/mol (1089 without restraints) Performing minimization step: 4343. Total energy = 1091 kcal/mol (1089 without restraints) Performing minimization step: 4344. Total energy = 1091 kcal/mol (1089 without restraints) Performing minimization step: 4345. Total energy = 1091 kcal/mol (1089 without restraints) Performing minimization step: 4346. Total energy = 1091 kcal/mol (1089 without restraints) Performing minimization step: 4347. Total energy = 1091 kcal/mol (1089 without restraints) Performing minimization step: 4348. Total energy = 1091 kcal/mol (1089 without restraints) Performing minimization step: 4349. Total energy = 1091 kcal/mol (1089 without restraints) Performing minimization step: 4350. Total energy = 1090 kcal/mol (1089 without restraints) Performing minimization step: 4351. Total energy = 1090 kcal/mol (1089 without restraints) Performing minimization step: 4352. Total energy = 1090 kcal/mol (1088 without restraints) Performing minimization step: 4353. Total energy = 1090 kcal/mol (1088 without restraints) Performing minimization step: 4354. Total energy = 1090 kcal/mol (1088 without restraints) Performing minimization step: 4355. Total energy = 1090 kcal/mol (1088 without restraints) Performing minimization step: 4356. Total energy = 1090 kcal/mol (1088 without restraints) Performing minimization step: 4357. Total energy = 1090 kcal/mol (1088 without restraints) Performing minimization step: 4358. Total energy = 1090 kcal/mol (1088 without restraints) Performing minimization step: 4359. Total energy = 1090 kcal/mol (1088 without restraints) Performing minimization step: 4360. Total energy = 1090 kcal/mol (1088 without restraints) Performing minimization step: 4361. Total energy = 1090 kcal/mol (1088 without restraints) Performing minimization step: 4362. Total energy = 1090 kcal/mol (1088 without restraints) Performing minimization step: 4363. Total energy = 1090 kcal/mol (1088 without restraints) Performing minimization step: 4364. Total energy = 1090 kcal/mol (1088 without restraints) Performing minimization step: 4365. Total energy = 1090 kcal/mol (1088 without restraints) Performing minimization step: 4366. Total energy = 1090 kcal/mol (1088 without restraints) Performing minimization step: 4367. Total energy = 1090 kcal/mol (1088 without restraints) Performing minimization step: 4368. Total energy = 1090 kcal/mol (1088 without restraints) Performing minimization step: 4369. Total energy = 1090 kcal/mol (1088 without restraints) Performing minimization step: 4370. Total energy = 1090 kcal/mol (1088 without restraints) Performing minimization step: 4371. Total energy = 1090 kcal/mol (1088 without restraints) Performing minimization step: 4372. Total energy = 1090 kcal/mol (1088 without restraints) Performing minimization step: 4373. Total energy = 1090 kcal/mol (1088 without restraints) Performing minimization step: 4374. Total energy = 1090 kcal/mol (1088 without restraints) Performing minimization step: 4375. Total energy = 1090 kcal/mol (1088 without restraints) Performing minimization step: 4376. Total energy = 1090 kcal/mol (1088 without restraints) Performing minimization step: 4377. Total energy = 1090 kcal/mol (1088 without restraints) Performing minimization step: 4378. Total energy = 1090 kcal/mol (1088 without restraints) Performing minimization step: 4379. Total energy = 1090 kcal/mol (1088 without restraints) Performing minimization step: 4380. Total energy = 1090 kcal/mol (1088 without restraints) Performing minimization step: 4381. Total energy = 1090 kcal/mol (1088 without restraints) Performing minimization step: 4382. Total energy = 1090 kcal/mol (1088 without restraints) Performing minimization step: 4383. Total energy = 1090 kcal/mol (1088 without restraints) Performing minimization step: 4384. Total energy = 1090 kcal/mol (1088 without restraints) Performing minimization step: 4385. Total energy = 1090 kcal/mol (1088 without restraints) Performing minimization step: 4386. Total energy = 1090 kcal/mol (1088 without restraints) Performing minimization step: 4387. Total energy = 1089 kcal/mol (1088 without restraints) Performing minimization step: 4388. Total energy = 1089 kcal/mol (1088 without restraints) Performing minimization step: 4389. Total energy = 1089 kcal/mol (1088 without restraints) Performing minimization step: 4390. Total energy = 1089 kcal/mol (1087 without restraints) Performing minimization step: 4391. Total energy = 1089 kcal/mol (1087 without restraints) Performing minimization step: 4392. Total energy = 1089 kcal/mol (1087 without restraints) Performing minimization step: 4393. Total energy = 1089 kcal/mol (1087 without restraints) Performing minimization step: 4394. Total energy = 1089 kcal/mol (1087 without restraints) Performing minimization step: 4395. Total energy = 1089 kcal/mol (1087 without restraints) Performing minimization step: 4396. Total energy = 1089 kcal/mol (1087 without restraints) Performing minimization step: 4397. Total energy = 1089 kcal/mol (1087 without restraints) Performing minimization step: 4398. Total energy = 1089 kcal/mol (1087 without restraints) Performing minimization step: 4399. Total energy = 1089 kcal/mol (1087 without restraints) Performing minimization step: 4400. Total energy = 1089 kcal/mol (1087 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/90a3fe85/tmp/apt_refx/apt_refx.pdb ...Done. Performing minimization step: 4401. Total energy = 1089 kcal/mol (1087 without restraints) Performing minimization step: 4402. Total energy = 1089 kcal/mol (1087 without restraints) Performing minimization step: 4403. Total energy = 1089 kcal/mol (1087 without restraints) Performing minimization step: 4404. Total energy = 1089 kcal/mol (1087 without restraints) Performing minimization step: 4405. Total energy = 1089 kcal/mol (1087 without restraints) Performing minimization step: 4406. Total energy = 1089 kcal/mol (1087 without restraints) Performing minimization step: 4407. Total energy = 1089 kcal/mol (1087 without restraints) Performing minimization step: 4408. Total energy = 1089 kcal/mol (1087 without restraints) Performing minimization step: 4409. Total energy = 1089 kcal/mol (1087 without restraints) Performing minimization step: 4410. Total energy = 1089 kcal/mol (1087 without restraints) Performing minimization step: 4411. Total energy = 1089 kcal/mol (1087 without restraints) Performing minimization step: 4412. Total energy = 1089 kcal/mol (1087 without restraints) Performing minimization step: 4413. Total energy = 1089 kcal/mol (1087 without restraints) Performing minimization step: 4414. Total energy = 1089 kcal/mol (1087 without restraints) Performing minimization step: 4415. Total energy = 1089 kcal/mol (1087 without restraints) Performing minimization step: 4416. Total energy = 1089 kcal/mol (1087 without restraints) Performing minimization step: 4417. Total energy = 1089 kcal/mol (1087 without restraints) Performing minimization step: 4418. Total energy = 1089 kcal/mol (1087 without restraints) Performing minimization step: 4419. Total energy = 1089 kcal/mol (1087 without restraints) Performing minimization step: 4420. Total energy = 1089 kcal/mol (1087 without restraints) Performing minimization step: 4421. Total energy = 1089 kcal/mol (1087 without restraints) Performing minimization step: 4422. Total energy = 1089 kcal/mol (1087 without restraints) Performing minimization step: 4423. Total energy = 1089 kcal/mol (1087 without restraints) Performing minimization step: 4424. Total energy = 1089 kcal/mol (1087 without restraints) Performing minimization step: 4425. Total energy = 1089 kcal/mol (1087 without restraints) Performing minimization step: 4426. Total energy = 1088 kcal/mol (1087 without restraints) Performing minimization step: 4427. Total energy = 1088 kcal/mol (1087 without restraints) Performing minimization step: 4428. Total energy = 1088 kcal/mol (1086 without restraints) Performing minimization step: 4429. Total energy = 1088 kcal/mol (1086 without restraints) Performing minimization step: 4430. Total energy = 1088 kcal/mol (1086 without restraints) Performing minimization step: 4431. Total energy = 1088 kcal/mol (1086 without restraints) Performing minimization step: 4432. Total energy = 1088 kcal/mol (1086 without restraints) Performing minimization step: 4433. Total energy = 1088 kcal/mol (1086 without restraints) Performing minimization step: 4434. Total energy = 1088 kcal/mol (1086 without restraints) Performing minimization step: 4435. Total energy = 1088 kcal/mol (1086 without restraints) Performing minimization step: 4436. Total energy = 1088 kcal/mol (1086 without restraints) Performing minimization step: 4437. Total energy = 1088 kcal/mol (1086 without restraints) Performing minimization step: 4438. Total energy = 1088 kcal/mol (1086 without restraints) Performing minimization step: 4439. Total energy = 1088 kcal/mol (1086 without restraints) Performing minimization step: 4440. Total energy = 1088 kcal/mol (1086 without restraints) Performing minimization step: 4441. Total energy = 1088 kcal/mol (1086 without restraints) Performing minimization step: 4442. Total energy = 1088 kcal/mol (1086 without restraints) Performing minimization step: 4443. Total energy = 1088 kcal/mol (1086 without restraints) Performing minimization step: 4444. Total energy = 1088 kcal/mol (1086 without restraints) Performing minimization step: 4445. Total energy = 1088 kcal/mol (1086 without restraints) Performing minimization step: 4446. Total energy = 1088 kcal/mol (1086 without restraints) Performing minimization step: 4447. Total energy = 1088 kcal/mol (1086 without restraints) Performing minimization step: 4448. Total energy = 1088 kcal/mol (1086 without restraints) Performing minimization step: 4449. Total energy = 1088 kcal/mol (1086 without restraints) Performing minimization step: 4450. Total energy = 1088 kcal/mol (1086 without restraints) Performing minimization step: 4451. Total energy = 1088 kcal/mol (1086 without restraints) Performing minimization step: 4452. Total energy = 1088 kcal/mol (1086 without restraints) Performing minimization step: 4453. Total energy = 1088 kcal/mol (1086 without restraints) Performing minimization step: 4454. Total energy = 1088 kcal/mol (1086 without restraints) Performing minimization step: 4455. Total energy = 1088 kcal/mol (1086 without restraints) Performing minimization step: 4456. Total energy = 1088 kcal/mol (1086 without restraints) Performing minimization step: 4457. Total energy = 1088 kcal/mol (1086 without restraints) Performing minimization step: 4458. Total energy = 1088 kcal/mol (1086 without restraints) Performing minimization step: 4459. Total energy = 1088 kcal/mol (1086 without restraints) Performing minimization step: 4460. Total energy = 1088 kcal/mol (1086 without restraints) Performing minimization step: 4461. Total energy = 1088 kcal/mol (1086 without restraints) Performing minimization step: 4462. Total energy = 1088 kcal/mol (1086 without restraints) Performing minimization step: 4463. Total energy = 1088 kcal/mol (1086 without restraints) Performing minimization step: 4464. Total energy = 1088 kcal/mol (1086 without restraints) Performing minimization step: 4465. Total energy = 1087 kcal/mol (1086 without restraints) Performing minimization step: 4466. Total energy = 1087 kcal/mol (1086 without restraints) Performing minimization step: 4467. Total energy = 1087 kcal/mol (1085 without restraints) Performing minimization step: 4468. Total energy = 1087 kcal/mol (1085 without restraints) Performing minimization step: 4469. Total energy = 1087 kcal/mol (1085 without restraints) Performing minimization step: 4470. Total energy = 1087 kcal/mol (1085 without restraints) Performing minimization step: 4471. Total energy = 1087 kcal/mol (1085 without restraints) Performing minimization step: 4472. Total energy = 1087 kcal/mol (1085 without restraints) Performing minimization step: 4473. Total energy = 1087 kcal/mol (1085 without restraints) Performing minimization step: 4474. Total energy = 1087 kcal/mol (1085 without restraints) Performing minimization step: 4475. Total energy = 1087 kcal/mol (1085 without restraints) Performing minimization step: 4476. Total energy = 1087 kcal/mol (1085 without restraints) Performing minimization step: 4477. Total energy = 1087 kcal/mol (1085 without restraints) Performing minimization step: 4478. Total energy = 1087 kcal/mol (1085 without restraints) Performing minimization step: 4479. Total energy = 1087 kcal/mol (1085 without restraints) Performing minimization step: 4480. Total energy = 1087 kcal/mol (1085 without restraints) Performing minimization step: 4481. Total energy = 1087 kcal/mol (1085 without restraints) Performing minimization step: 4482. Total energy = 1087 kcal/mol (1085 without restraints) Performing minimization step: 4483. Total energy = 1087 kcal/mol (1085 without restraints) Performing minimization step: 4484. Total energy = 1087 kcal/mol (1085 without restraints) Performing minimization step: 4485. Total energy = 1087 kcal/mol (1085 without restraints) Performing minimization step: 4486. Total energy = 1087 kcal/mol (1085 without restraints) Performing minimization step: 4487. Total energy = 1087 kcal/mol (1085 without restraints) Performing minimization step: 4488. Total energy = 1087 kcal/mol (1085 without restraints) Performing minimization step: 4489. Total energy = 1087 kcal/mol (1085 without restraints) Performing minimization step: 4490. Total energy = 1087 kcal/mol (1085 without restraints) Performing minimization step: 4491. Total energy = 1087 kcal/mol (1085 without restraints) Performing minimization step: 4492. Total energy = 1087 kcal/mol (1085 without restraints) Performing minimization step: 4493. Total energy = 1087 kcal/mol (1085 without restraints) Performing minimization step: 4494. Total energy = 1087 kcal/mol (1085 without restraints) Performing minimization step: 4495. Total energy = 1087 kcal/mol (1085 without restraints) Performing minimization step: 4496. Total energy = 1087 kcal/mol (1085 without restraints) Performing minimization step: 4497. Total energy = 1087 kcal/mol (1085 without restraints) Performing minimization step: 4498. Total energy = 1087 kcal/mol (1085 without restraints) Performing minimization step: 4499. Total energy = 1087 kcal/mol (1085 without restraints) Performing minimization step: 4500. Total energy = 1087 kcal/mol (1085 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/90a3fe85/tmp/apt_refx/apt_refx.pdb ...Done. Performing minimization step: 4501. Total energy = 1087 kcal/mol (1085 without restraints) Performing minimization step: 4502. Total energy = 1087 kcal/mol (1085 without restraints) Performing minimization step: 4503. Total energy = 1087 kcal/mol (1085 without restraints) Performing minimization step: 4504. Total energy = 1087 kcal/mol (1085 without restraints) Performing minimization step: 4505. Total energy = 1087 kcal/mol (1085 without restraints) Performing minimization step: 4506. Total energy = 1086 kcal/mol (1085 without restraints) Performing minimization step: 4507. Total energy = 1086 kcal/mol (1085 without restraints) Performing minimization step: 4508. Total energy = 1086 kcal/mol (1084 without restraints) Performing minimization step: 4509. Total energy = 1086 kcal/mol (1084 without restraints) Performing minimization step: 4510. Total energy = 1086 kcal/mol (1084 without restraints) Performing minimization step: 4511. Total energy = 1086 kcal/mol (1084 without restraints) Performing minimization step: 4512. Total energy = 1086 kcal/mol (1084 without restraints) Performing minimization step: 4513. Total energy = 1086 kcal/mol (1084 without restraints) Performing minimization step: 4514. Total energy = 1086 kcal/mol (1084 without restraints) Performing minimization step: 4515. Total energy = 1086 kcal/mol (1084 without restraints) Performing minimization step: 4516. Total energy = 1086 kcal/mol (1084 without restraints) Performing minimization step: 4517. Total energy = 1086 kcal/mol (1084 without restraints) Performing minimization step: 4518. Total energy = 1086 kcal/mol (1084 without restraints) Performing minimization step: 4519. Total energy = 1086 kcal/mol (1084 without restraints) Performing minimization step: 4520. Total energy = 1086 kcal/mol (1084 without restraints) Performing minimization step: 4521. Total energy = 1086 kcal/mol (1084 without restraints) Performing minimization step: 4522. Total energy = 1086 kcal/mol (1084 without restraints) Performing minimization step: 4523. Total energy = 1086 kcal/mol (1084 without restraints) Performing minimization step: 4524. Total energy = 1086 kcal/mol (1084 without restraints) Performing minimization step: 4525. Total energy = 1086 kcal/mol (1084 without restraints) Performing minimization step: 4526. Total energy = 1086 kcal/mol (1084 without restraints) Performing minimization step: 4527. Total energy = 1086 kcal/mol (1084 without restraints) Performing minimization step: 4528. Total energy = 1086 kcal/mol (1084 without restraints) Performing minimization step: 4529. Total energy = 1086 kcal/mol (1084 without restraints) Performing minimization step: 4530. Total energy = 1086 kcal/mol (1084 without restraints) Performing minimization step: 4531. Total energy = 1086 kcal/mol (1084 without restraints) Performing minimization step: 4532. Total energy = 1086 kcal/mol (1084 without restraints) Performing minimization step: 4533. Total energy = 1086 kcal/mol (1084 without restraints) Performing minimization step: 4534. Total energy = 1086 kcal/mol (1084 without restraints) Performing minimization step: 4535. Total energy = 1086 kcal/mol (1084 without restraints) Performing minimization step: 4536. Total energy = 1086 kcal/mol (1084 without restraints) Performing minimization step: 4537. Total energy = 1086 kcal/mol (1084 without restraints) Performing minimization step: 4538. Total energy = 1086 kcal/mol (1084 without restraints) Performing minimization step: 4539. Total energy = 1086 kcal/mol (1084 without restraints) Performing minimization step: 4540. Total energy = 1086 kcal/mol (1084 without restraints) Performing minimization step: 4541. Total energy = 1086 kcal/mol (1084 without restraints) Performing minimization step: 4542. Total energy = 1086 kcal/mol (1084 without restraints) Performing minimization step: 4543. Total energy = 1086 kcal/mol (1084 without restraints) Performing minimization step: 4544. Total energy = 1086 kcal/mol (1084 without restraints) Performing minimization step: 4545. Total energy = 1086 kcal/mol (1084 without restraints) Performing minimization step: 4546. Total energy = 1086 kcal/mol (1084 without restraints) Performing minimization step: 4547. Total energy = 1086 kcal/mol (1084 without restraints) Performing minimization step: 4548. Total energy = 1085 kcal/mol (1084 without restraints) Performing minimization step: 4549. Total energy = 1085 kcal/mol (1083 without restraints) Performing minimization step: 4550. Total energy = 1085 kcal/mol (1083 without restraints) Performing minimization step: 4551. Total energy = 1085 kcal/mol (1083 without restraints) Performing minimization step: 4552. Total energy = 1085 kcal/mol (1083 without restraints) Performing minimization step: 4553. Total energy = 1085 kcal/mol (1083 without restraints) Performing minimization step: 4554. Total energy = 1085 kcal/mol (1083 without restraints) Performing minimization step: 4555. Total energy = 1085 kcal/mol (1083 without restraints) Performing minimization step: 4556. Total energy = 1085 kcal/mol (1083 without restraints) Performing minimization step: 4557. Total energy = 1085 kcal/mol (1083 without restraints) Performing minimization step: 4558. Total energy = 1085 kcal/mol (1083 without restraints) Performing minimization step: 4559. Total energy = 1085 kcal/mol (1083 without restraints) Performing minimization step: 4560. Total energy = 1085 kcal/mol (1083 without restraints) Performing minimization step: 4561. Total energy = 1085 kcal/mol (1083 without restraints) Performing minimization step: 4562. Total energy = 1085 kcal/mol (1083 without restraints) Performing minimization step: 4563. Total energy = 1085 kcal/mol (1083 without restraints) Performing minimization step: 4564. Total energy = 1085 kcal/mol (1083 without restraints) Performing minimization step: 4565. Total energy = 1085 kcal/mol (1083 without restraints) Performing minimization step: 4566. Total energy = 1085 kcal/mol (1083 without restraints) Performing minimization step: 4567. Total energy = 1085 kcal/mol (1083 without restraints) Performing minimization step: 4568. Total energy = 1085 kcal/mol (1083 without restraints) Performing minimization step: 4569. Total energy = 1085 kcal/mol (1083 without restraints) Performing minimization step: 4570. Total energy = 1085 kcal/mol (1083 without restraints) Performing minimization step: 4571. Total energy = 1085 kcal/mol (1083 without restraints) Performing minimization step: 4572. Total energy = 1085 kcal/mol (1083 without restraints) Performing minimization step: 4573. Total energy = 1085 kcal/mol (1083 without restraints) Performing minimization step: 4574. Total energy = 1085 kcal/mol (1083 without restraints) Performing minimization step: 4575. Total energy = 1085 kcal/mol (1083 without restraints) Performing minimization step: 4576. Total energy = 1085 kcal/mol (1083 without restraints) Performing minimization step: 4577. Total energy = 1085 kcal/mol (1083 without restraints) Performing minimization step: 4578. Total energy = 1085 kcal/mol (1083 without restraints) Performing minimization step: 4579. Total energy = 1085 kcal/mol (1083 without restraints) Performing minimization step: 4580. Total energy = 1085 kcal/mol (1083 without restraints) Performing minimization step: 4581. Total energy = 1085 kcal/mol (1083 without restraints) Performing minimization step: 4582. Total energy = 1085 kcal/mol (1083 without restraints) Performing minimization step: 4583. Total energy = 1085 kcal/mol (1083 without restraints) Performing minimization step: 4584. Total energy = 1085 kcal/mol (1083 without restraints) Performing minimization step: 4585. Total energy = 1085 kcal/mol (1083 without restraints) Performing minimization step: 4586. Total energy = 1085 kcal/mol (1083 without restraints) Performing minimization step: 4587. Total energy = 1085 kcal/mol (1083 without restraints) Performing minimization step: 4588. Total energy = 1085 kcal/mol (1083 without restraints) Performing minimization step: 4589. Total energy = 1085 kcal/mol (1083 without restraints) Performing minimization step: 4590. Total energy = 1084 kcal/mol (1083 without restraints) Performing minimization step: 4591. Total energy = 1084 kcal/mol (1082 without restraints) Performing minimization step: 4592. Total energy = 1084 kcal/mol (1082 without restraints) Performing minimization step: 4593. Total energy = 1084 kcal/mol (1082 without restraints) Performing minimization step: 4594. Total energy = 1084 kcal/mol (1082 without restraints) Performing minimization step: 4595. Total energy = 1084 kcal/mol (1082 without restraints) Performing minimization step: 4596. Total energy = 1084 kcal/mol (1082 without restraints) Performing minimization step: 4597. Total energy = 1084 kcal/mol (1082 without restraints) Performing minimization step: 4598. Total energy = 1084 kcal/mol (1082 without restraints) Performing minimization step: 4599. Total energy = 1084 kcal/mol (1082 without restraints) Performing minimization step: 4600. Total energy = 1084 kcal/mol (1082 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/90a3fe85/tmp/apt_refx/apt_refx.pdb ...Done. Performing minimization step: 4601. Total energy = 1084 kcal/mol (1082 without restraints) Performing minimization step: 4602. Total energy = 1084 kcal/mol (1082 without restraints) Performing minimization step: 4603. Total energy = 1084 kcal/mol (1082 without restraints) Performing minimization step: 4604. Total energy = 1084 kcal/mol (1082 without restraints) Performing minimization step: 4605. Total energy = 1084 kcal/mol (1082 without restraints) Performing minimization step: 4606. Total energy = 1084 kcal/mol (1082 without restraints) Performing minimization step: 4607. Total energy = 1084 kcal/mol (1082 without restraints) Performing minimization step: 4608. Total energy = 1084 kcal/mol (1082 without restraints) Performing minimization step: 4609. Total energy = 1084 kcal/mol (1082 without restraints) Performing minimization step: 4610. Total energy = 1084 kcal/mol (1082 without restraints) Performing minimization step: 4611. Total energy = 1084 kcal/mol (1082 without restraints) Performing minimization step: 4612. Total energy = 1084 kcal/mol (1082 without restraints) Performing minimization step: 4613. Total energy = 1084 kcal/mol (1082 without restraints) Performing minimization step: 4614. Total energy = 1084 kcal/mol (1082 without restraints) Performing minimization step: 4615. Total energy = 1084 kcal/mol (1082 without restraints) Performing minimization step: 4616. Total energy = 1084 kcal/mol (1082 without restraints) Performing minimization step: 4617. Total energy = 1084 kcal/mol (1082 without restraints) Performing minimization step: 4618. Total energy = 1084 kcal/mol (1082 without restraints) Performing minimization step: 4619. Total energy = 1084 kcal/mol (1082 without restraints) Performing minimization step: 4620. Total energy = 1084 kcal/mol (1082 without restraints) Performing minimization step: 4621. Total energy = 1084 kcal/mol (1082 without restraints) Performing minimization step: 4622. Total energy = 1084 kcal/mol (1082 without restraints) Performing minimization step: 4623. Total energy = 1084 kcal/mol (1082 without restraints) Performing minimization step: 4624. Total energy = 1084 kcal/mol (1082 without restraints) Performing minimization step: 4625. Total energy = 1084 kcal/mol (1082 without restraints) Performing minimization step: 4626. Total energy = 1084 kcal/mol (1082 without restraints) Performing minimization step: 4627. Total energy = 1084 kcal/mol (1082 without restraints) Performing minimization step: 4628. Total energy = 1084 kcal/mol (1082 without restraints) Performing minimization step: 4629. Total energy = 1084 kcal/mol (1082 without restraints) Performing minimization step: 4630. Total energy = 1084 kcal/mol (1082 without restraints) Performing minimization step: 4631. Total energy = 1084 kcal/mol (1082 without restraints) Performing minimization step: 4632. Total energy = 1084 kcal/mol (1082 without restraints) Performing minimization step: 4633. Total energy = 1084 kcal/mol (1082 without restraints) Performing minimization step: 4634. Total energy = 1083 kcal/mol (1082 without restraints) Performing minimization step: 4635. Total energy = 1083 kcal/mol (1081 without restraints) Performing minimization step: 4636. Total energy = 1083 kcal/mol (1081 without restraints) Performing minimization step: 4637. Total energy = 1083 kcal/mol (1081 without restraints) Performing minimization step: 4638. Total energy = 1083 kcal/mol (1081 without restraints) Performing minimization step: 4639. Total energy = 1083 kcal/mol (1081 without restraints) Performing minimization step: 4640. Total energy = 1083 kcal/mol (1081 without restraints) Performing minimization step: 4641. Total energy = 1083 kcal/mol (1081 without restraints) Performing minimization step: 4642. Total energy = 1083 kcal/mol (1081 without restraints) Performing minimization step: 4643. Total energy = 1083 kcal/mol (1081 without restraints) Performing minimization step: 4644. Total energy = 1083 kcal/mol (1081 without restraints) Performing minimization step: 4645. Total energy = 1083 kcal/mol (1081 without restraints) Performing minimization step: 4646. Total energy = 1083 kcal/mol (1081 without restraints) Performing minimization step: 4647. Total energy = 1083 kcal/mol (1081 without restraints) Performing minimization step: 4648. Total energy = 1083 kcal/mol (1081 without restraints) Performing minimization step: 4649. Total energy = 1083 kcal/mol (1081 without restraints) Performing minimization step: 4650. Total energy = 1083 kcal/mol (1081 without restraints) Performing minimization step: 4651. Total energy = 1083 kcal/mol (1081 without restraints) Performing minimization step: 4652. Total energy = 1083 kcal/mol (1081 without restraints) Performing minimization step: 4653. Total energy = 1083 kcal/mol (1081 without restraints) Performing minimization step: 4654. Total energy = 1083 kcal/mol (1081 without restraints) Performing minimization step: 4655. Total energy = 1083 kcal/mol (1081 without restraints) Performing minimization step: 4656. Total energy = 1083 kcal/mol (1081 without restraints) Performing minimization step: 4657. Total energy = 1083 kcal/mol (1081 without restraints) Performing minimization step: 4658. Total energy = 1083 kcal/mol (1081 without restraints) Performing minimization step: 4659. Total energy = 1083 kcal/mol (1081 without restraints) Performing minimization step: 4660. Total energy = 1083 kcal/mol (1081 without restraints) Performing minimization step: 4661. Total energy = 1083 kcal/mol (1081 without restraints) Performing minimization step: 4662. Total energy = 1083 kcal/mol (1081 without restraints) Performing minimization step: 4663. Total energy = 1083 kcal/mol (1081 without restraints) Performing minimization step: 4664. Total energy = 1083 kcal/mol (1081 without restraints) Performing minimization step: 4665. Total energy = 1083 kcal/mol (1081 without restraints) Performing minimization step: 4666. Total energy = 1083 kcal/mol (1081 without restraints) Performing minimization step: 4667. Total energy = 1083 kcal/mol (1081 without restraints) Performing minimization step: 4668. Total energy = 1083 kcal/mol (1081 without restraints) Performing minimization step: 4669. Total energy = 1083 kcal/mol (1081 without restraints) Performing minimization step: 4670. Total energy = 1083 kcal/mol (1081 without restraints) Performing minimization step: 4671. Total energy = 1083 kcal/mol (1081 without restraints) Performing minimization step: 4672. Total energy = 1083 kcal/mol (1081 without restraints) Performing minimization step: 4673. Total energy = 1083 kcal/mol (1081 without restraints) Performing minimization step: 4674. Total energy = 1083 kcal/mol (1081 without restraints) Performing minimization step: 4675. Total energy = 1083 kcal/mol (1081 without restraints) Performing minimization step: 4676. Total energy = 1083 kcal/mol (1081 without restraints) Performing minimization step: 4677. Total energy = 1083 kcal/mol (1081 without restraints) Performing minimization step: 4678. Total energy = 1083 kcal/mol (1081 without restraints) Performing minimization step: 4679. Total energy = 1082 kcal/mol (1081 without restraints) Performing minimization step: 4680. Total energy = 1082 kcal/mol (1080 without restraints) Performing minimization step: 4681. Total energy = 1082 kcal/mol (1080 without restraints) Performing minimization step: 4682. Total energy = 1082 kcal/mol (1080 without restraints) Performing minimization step: 4683. Total energy = 1082 kcal/mol (1080 without restraints) Performing minimization step: 4684. Total energy = 1082 kcal/mol (1080 without restraints) Performing minimization step: 4685. Total energy = 1082 kcal/mol (1080 without restraints) Performing minimization step: 4686. Total energy = 1082 kcal/mol (1080 without restraints) Performing minimization step: 4687. Total energy = 1082 kcal/mol (1080 without restraints) Performing minimization step: 4688. Total energy = 1082 kcal/mol (1080 without restraints) Performing minimization step: 4689. Total energy = 1082 kcal/mol (1080 without restraints) Performing minimization step: 4690. Total energy = 1082 kcal/mol (1080 without restraints) Performing minimization step: 4691. Total energy = 1082 kcal/mol (1080 without restraints) Performing minimization step: 4692. Total energy = 1082 kcal/mol (1080 without restraints) Performing minimization step: 4693. Total energy = 1082 kcal/mol (1080 without restraints) Performing minimization step: 4694. Total energy = 1082 kcal/mol (1080 without restraints) Performing minimization step: 4695. Total energy = 1082 kcal/mol (1080 without restraints) Performing minimization step: 4696. Total energy = 1082 kcal/mol (1080 without restraints) Performing minimization step: 4697. Total energy = 1082 kcal/mol (1080 without restraints) Performing minimization step: 4698. Total energy = 1082 kcal/mol (1080 without restraints) Performing minimization step: 4699. Total energy = 1082 kcal/mol (1080 without restraints) Performing minimization step: 4700. Total energy = 1082 kcal/mol (1080 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/90a3fe85/tmp/apt_refx/apt_refx.pdb ...Done. Performing minimization step: 4701. Total energy = 1082 kcal/mol (1080 without restraints) Performing minimization step: 4702. Total energy = 1082 kcal/mol (1080 without restraints) Performing minimization step: 4703. Total energy = 1082 kcal/mol (1080 without restraints) Performing minimization step: 4704. Total energy = 1082 kcal/mol (1080 without restraints) Performing minimization step: 4705. Total energy = 1082 kcal/mol (1080 without restraints) Performing minimization step: 4706. Total energy = 1082 kcal/mol (1080 without restraints) Performing minimization step: 4707. Total energy = 1082 kcal/mol (1080 without restraints) Performing minimization step: 4708. Total energy = 1082 kcal/mol (1080 without restraints) Performing minimization step: 4709. Total energy = 1082 kcal/mol (1080 without restraints) Performing minimization step: 4710. Total energy = 1082 kcal/mol (1080 without restraints) Performing minimization step: 4711. Total energy = 1082 kcal/mol (1080 without restraints) Performing minimization step: 4712. Total energy = 1082 kcal/mol (1080 without restraints) Performing minimization step: 4713. Total energy = 1082 kcal/mol (1080 without restraints) Performing minimization step: 4714. Total energy = 1082 kcal/mol (1080 without restraints) Performing minimization step: 4715. Total energy = 1082 kcal/mol (1080 without restraints) Performing minimization step: 4716. Total energy = 1082 kcal/mol (1080 without restraints) Performing minimization step: 4717. Total energy = 1082 kcal/mol (1080 without restraints) Performing minimization step: 4718. Total energy = 1082 kcal/mol (1080 without restraints) Performing minimization step: 4719. Total energy = 1082 kcal/mol (1080 without restraints) Performing minimization step: 4720. Total energy = 1082 kcal/mol (1080 without restraints) Performing minimization step: 4721. Total energy = 1082 kcal/mol (1080 without restraints) Performing minimization step: 4722. Total energy = 1082 kcal/mol (1080 without restraints) Performing minimization step: 4723. Total energy = 1082 kcal/mol (1080 without restraints) Performing minimization step: 4724. Total energy = 1082 kcal/mol (1080 without restraints) Performing minimization step: 4725. Total energy = 1082 kcal/mol (1080 without restraints) Performing minimization step: 4726. Total energy = 1081 kcal/mol (1079 without restraints) Performing minimization step: 4727. Total energy = 1081 kcal/mol (1079 without restraints) Performing minimization step: 4728. Total energy = 1081 kcal/mol (1079 without restraints) Performing minimization step: 4729. Total energy = 1081 kcal/mol (1079 without restraints) Performing minimization step: 4730. Total energy = 1081 kcal/mol (1079 without restraints) Performing minimization step: 4731. Total energy = 1081 kcal/mol (1079 without restraints) Performing minimization step: 4732. Total energy = 1081 kcal/mol (1079 without restraints) Performing minimization step: 4733. Total energy = 1081 kcal/mol (1079 without restraints) Performing minimization step: 4734. Total energy = 1081 kcal/mol (1079 without restraints) Performing minimization step: 4735. Total energy = 1081 kcal/mol (1079 without restraints) Performing minimization step: 4736. Total energy = 1081 kcal/mol (1079 without restraints) Performing minimization step: 4737. Total energy = 1081 kcal/mol (1079 without restraints) Performing minimization step: 4738. Total energy = 1081 kcal/mol (1079 without restraints) Performing minimization step: 4739. Total energy = 1081 kcal/mol (1079 without restraints) Performing minimization step: 4740. Total energy = 1081 kcal/mol (1079 without restraints) Performing minimization step: 4741. Total energy = 1081 kcal/mol (1079 without restraints) Performing minimization step: 4742. Total energy = 1081 kcal/mol (1079 without restraints) Performing minimization step: 4743. Total energy = 1081 kcal/mol (1079 without restraints) Performing minimization step: 4744. Total energy = 1081 kcal/mol (1079 without restraints) Performing minimization step: 4745. Total energy = 1081 kcal/mol (1079 without restraints) Performing minimization step: 4746. Total energy = 1081 kcal/mol (1079 without restraints) Performing minimization step: 4747. Total energy = 1081 kcal/mol (1079 without restraints) Performing minimization step: 4748. Total energy = 1081 kcal/mol (1079 without restraints) Performing minimization step: 4749. Total energy = 1081 kcal/mol (1079 without restraints) Performing minimization step: 4750. Total energy = 1081 kcal/mol (1079 without restraints) Performing minimization step: 4751. Total energy = 1081 kcal/mol (1079 without restraints) Performing minimization step: 4752. Total energy = 1081 kcal/mol (1079 without restraints) Performing minimization step: 4753. Total energy = 1081 kcal/mol (1079 without restraints) Performing minimization step: 4754. Total energy = 1081 kcal/mol (1079 without restraints) Performing minimization step: 4755. Total energy = 1081 kcal/mol (1079 without restraints) Performing minimization step: 4756. Total energy = 1081 kcal/mol (1079 without restraints) Performing minimization step: 4757. Total energy = 1081 kcal/mol (1079 without restraints) Performing minimization step: 4758. Total energy = 1081 kcal/mol (1079 without restraints) Performing minimization step: 4759. Total energy = 1081 kcal/mol (1079 without restraints) Performing minimization step: 4760. Total energy = 1081 kcal/mol (1079 without restraints) Performing minimization step: 4761. Total energy = 1081 kcal/mol (1079 without restraints) Performing minimization step: 4762. Total energy = 1081 kcal/mol (1079 without restraints) Performing minimization step: 4763. Total energy = 1081 kcal/mol (1079 without restraints) Performing minimization step: 4764. Total energy = 1081 kcal/mol (1079 without restraints) Performing minimization step: 4765. Total energy = 1081 kcal/mol (1079 without restraints) Performing minimization step: 4766. Total energy = 1081 kcal/mol (1079 without restraints) Performing minimization step: 4767. Total energy = 1081 kcal/mol (1079 without restraints) Performing minimization step: 4768. Total energy = 1081 kcal/mol (1079 without restraints) Performing minimization step: 4769. Total energy = 1081 kcal/mol (1079 without restraints) Performing minimization step: 4770. Total energy = 1081 kcal/mol (1079 without restraints) Performing minimization step: 4771. Total energy = 1081 kcal/mol (1079 without restraints) Performing minimization step: 4772. Total energy = 1081 kcal/mol (1079 without restraints) Performing minimization step: 4773. Total energy = 1080 kcal/mol (1078 without restraints) Performing minimization step: 4774. Total energy = 1080 kcal/mol (1078 without restraints) Performing minimization step: 4775. Total energy = 1080 kcal/mol (1078 without restraints) Performing minimization step: 4776. Total energy = 1080 kcal/mol (1078 without restraints) Performing minimization step: 4777. Total energy = 1080 kcal/mol (1078 without restraints) Performing minimization step: 4778. Total energy = 1080 kcal/mol (1078 without restraints) Performing minimization step: 4779. Total energy = 1080 kcal/mol (1078 without restraints) Performing minimization step: 4780. Total energy = 1080 kcal/mol (1078 without restraints) Performing minimization step: 4781. Total energy = 1080 kcal/mol (1078 without restraints) Performing minimization step: 4782. Total energy = 1080 kcal/mol (1078 without restraints) Performing minimization step: 4783. Total energy = 1080 kcal/mol (1078 without restraints) Performing minimization step: 4784. Total energy = 1080 kcal/mol (1078 without restraints) Performing minimization step: 4785. Total energy = 1080 kcal/mol (1078 without restraints) Performing minimization step: 4786. Total energy = 1080 kcal/mol (1078 without restraints) Performing minimization step: 4787. Total energy = 1080 kcal/mol (1078 without restraints) Performing minimization step: 4788. Total energy = 1080 kcal/mol (1078 without restraints) Performing minimization step: 4789. Total energy = 1080 kcal/mol (1078 without restraints) Performing minimization step: 4790. Total energy = 1080 kcal/mol (1078 without restraints) Performing minimization step: 4791. Total energy = 1080 kcal/mol (1078 without restraints) Performing minimization step: 4792. Total energy = 1080 kcal/mol (1078 without restraints) Performing minimization step: 4793. Total energy = 1080 kcal/mol (1078 without restraints) Performing minimization step: 4794. Total energy = 1080 kcal/mol (1078 without restraints) Performing minimization step: 4795. Total energy = 1080 kcal/mol (1078 without restraints) Performing minimization step: 4796. Total energy = 1080 kcal/mol (1078 without restraints) Performing minimization step: 4797. Total energy = 1080 kcal/mol (1078 without restraints) Performing minimization step: 4798. Total energy = 1080 kcal/mol (1078 without restraints) Performing minimization step: 4799. Total energy = 1080 kcal/mol (1078 without restraints) Performing minimization step: 4800. Total energy = 1080 kcal/mol (1078 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/90a3fe85/tmp/apt_refx/apt_refx.pdb ...Done. Performing minimization step: 4801. Total energy = 1080 kcal/mol (1078 without restraints) Performing minimization step: 4802. Total energy = 1080 kcal/mol (1078 without restraints) Performing minimization step: 4803. Total energy = 1080 kcal/mol (1078 without restraints) Performing minimization step: 4804. Total energy = 1080 kcal/mol (1078 without restraints) Performing minimization step: 4805. Total energy = 1080 kcal/mol (1078 without restraints) Performing minimization step: 4806. Total energy = 1080 kcal/mol (1078 without restraints) Performing minimization step: 4807. Total energy = 1080 kcal/mol (1078 without restraints) Performing minimization step: 4808. Total energy = 1080 kcal/mol (1078 without restraints) Performing minimization step: 4809. Total energy = 1080 kcal/mol (1078 without restraints) Performing minimization step: 4810. Total energy = 1080 kcal/mol (1078 without restraints) Performing minimization step: 4811. Total energy = 1080 kcal/mol (1078 without restraints) Performing minimization step: 4812. Total energy = 1080 kcal/mol (1078 without restraints) Performing minimization step: 4813. Total energy = 1080 kcal/mol (1078 without restraints) Performing minimization step: 4814. Total energy = 1080 kcal/mol (1078 without restraints) Performing minimization step: 4815. Total energy = 1080 kcal/mol (1078 without restraints) Performing minimization step: 4816. Total energy = 1080 kcal/mol (1078 without restraints) Performing minimization step: 4817. Total energy = 1080 kcal/mol (1078 without restraints) Performing minimization step: 4818. Total energy = 1080 kcal/mol (1078 without restraints) Performing minimization step: 4819. Total energy = 1080 kcal/mol (1078 without restraints) Performing minimization step: 4820. Total energy = 1080 kcal/mol (1078 without restraints) Performing minimization step: 4821. Total energy = 1080 kcal/mol (1077 without restraints) Performing minimization step: 4822. Total energy = 1079 kcal/mol (1077 without restraints) Performing minimization step: 4823. Total energy = 1079 kcal/mol (1077 without restraints) Performing minimization step: 4824. Total energy = 1079 kcal/mol (1077 without restraints) Performing minimization step: 4825. Total energy = 1079 kcal/mol (1077 without restraints) Performing minimization step: 4826. Total energy = 1079 kcal/mol (1077 without restraints) Performing minimization step: 4827. Total energy = 1079 kcal/mol (1077 without restraints) Performing minimization step: 4828. Total energy = 1079 kcal/mol (1077 without restraints) Performing minimization step: 4829. Total energy = 1079 kcal/mol (1077 without restraints) Performing minimization step: 4830. Total energy = 1079 kcal/mol (1077 without restraints) Performing minimization step: 4831. Total energy = 1079 kcal/mol (1077 without restraints) Performing minimization step: 4832. Total energy = 1079 kcal/mol (1077 without restraints) Performing minimization step: 4833. Total energy = 1079 kcal/mol (1077 without restraints) Performing minimization step: 4834. Total energy = 1079 kcal/mol (1077 without restraints) Performing minimization step: 4835. Total energy = 1079 kcal/mol (1077 without restraints) Performing minimization step: 4836. Total energy = 1079 kcal/mol (1077 without restraints) Performing minimization step: 4837. Total energy = 1079 kcal/mol (1077 without restraints) Performing minimization step: 4838. Total energy = 1079 kcal/mol (1077 without restraints) Performing minimization step: 4839. Total energy = 1079 kcal/mol (1077 without restraints) Performing minimization step: 4840. Total energy = 1079 kcal/mol (1077 without restraints) Performing minimization step: 4841. Total energy = 1079 kcal/mol (1077 without restraints) Performing minimization step: 4842. Total energy = 1079 kcal/mol (1077 without restraints) Performing minimization step: 4843. Total energy = 1079 kcal/mol (1077 without restraints) Performing minimization step: 4844. Total energy = 1079 kcal/mol (1077 without restraints) Performing minimization step: 4845. Total energy = 1079 kcal/mol (1077 without restraints) Performing minimization step: 4846. Total energy = 1079 kcal/mol (1077 without restraints) Performing minimization step: 4847. Total energy = 1079 kcal/mol (1077 without restraints) Performing minimization step: 4848. Total energy = 1079 kcal/mol (1077 without restraints) Performing minimization step: 4849. Total energy = 1079 kcal/mol (1077 without restraints) Performing minimization step: 4850. Total energy = 1079 kcal/mol (1077 without restraints) Performing minimization step: 4851. Total energy = 1079 kcal/mol (1077 without restraints) Performing minimization step: 4852. Total energy = 1079 kcal/mol (1077 without restraints) Performing minimization step: 4853. Total energy = 1079 kcal/mol (1077 without restraints) Performing minimization step: 4854. Total energy = 1079 kcal/mol (1077 without restraints) Performing minimization step: 4855. Total energy = 1079 kcal/mol (1077 without restraints) Performing minimization step: 4856. Total energy = 1079 kcal/mol (1077 without restraints) Performing minimization step: 4857. Total energy = 1079 kcal/mol (1077 without restraints) Performing minimization step: 4858. Total energy = 1079 kcal/mol (1077 without restraints) Performing minimization step: 4859. Total energy = 1079 kcal/mol (1077 without restraints) Performing minimization step: 4860. Total energy = 1079 kcal/mol (1077 without restraints) Performing minimization step: 4861. Total energy = 1079 kcal/mol (1077 without restraints) Performing minimization step: 4862. Total energy = 1079 kcal/mol (1077 without restraints) Performing minimization step: 4863. Total energy = 1079 kcal/mol (1077 without restraints) Performing minimization step: 4864. Total energy = 1079 kcal/mol (1077 without restraints) Performing minimization step: 4865. Total energy = 1079 kcal/mol (1077 without restraints) Performing minimization step: 4866. Total energy = 1079 kcal/mol (1077 without restraints) Performing minimization step: 4867. Total energy = 1079 kcal/mol (1077 without restraints) Performing minimization step: 4868. Total energy = 1079 kcal/mol (1077 without restraints) Performing minimization step: 4869. Total energy = 1079 kcal/mol (1077 without restraints) Performing minimization step: 4870. Total energy = 1079 kcal/mol (1077 without restraints) Performing minimization step: 4871. Total energy = 1079 kcal/mol (1076 without restraints) Performing minimization step: 4872. Total energy = 1078 kcal/mol (1076 without restraints) Performing minimization step: 4873. Total energy = 1078 kcal/mol (1076 without restraints) Performing minimization step: 4874. Total energy = 1078 kcal/mol (1076 without restraints) Performing minimization step: 4875. Total energy = 1078 kcal/mol (1076 without restraints) Performing minimization step: 4876. Total energy = 1078 kcal/mol (1076 without restraints) Performing minimization step: 4877. Total energy = 1078 kcal/mol (1076 without restraints) Performing minimization step: 4878. Total energy = 1078 kcal/mol (1076 without restraints) Performing minimization step: 4879. Total energy = 1078 kcal/mol (1076 without restraints) Performing minimization step: 4880. Total energy = 1078 kcal/mol (1076 without restraints) Performing minimization step: 4881. Total energy = 1078 kcal/mol (1076 without restraints) Performing minimization step: 4882. Total energy = 1078 kcal/mol (1076 without restraints) Performing minimization step: 4883. Total energy = 1078 kcal/mol (1076 without restraints) Performing minimization step: 4884. Total energy = 1078 kcal/mol (1076 without restraints) Performing minimization step: 4885. Total energy = 1078 kcal/mol (1076 without restraints) Performing minimization step: 4886. Total energy = 1078 kcal/mol (1076 without restraints) Performing minimization step: 4887. Total energy = 1078 kcal/mol (1076 without restraints) Performing minimization step: 4888. Total energy = 1078 kcal/mol (1076 without restraints) Performing minimization step: 4889. Total energy = 1078 kcal/mol (1076 without restraints) Performing minimization step: 4890. Total energy = 1078 kcal/mol (1076 without restraints) Performing minimization step: 4891. Total energy = 1078 kcal/mol (1076 without restraints) Performing minimization step: 4892. Total energy = 1078 kcal/mol (1076 without restraints) Performing minimization step: 4893. Total energy = 1078 kcal/mol (1076 without restraints) Performing minimization step: 4894. Total energy = 1078 kcal/mol (1076 without restraints) Performing minimization step: 4895. Total energy = 1078 kcal/mol (1076 without restraints) Performing minimization step: 4896. Total energy = 1078 kcal/mol (1076 without restraints) Performing minimization step: 4897. Total energy = 1078 kcal/mol (1076 without restraints) Performing minimization step: 4898. Total energy = 1078 kcal/mol (1076 without restraints) Performing minimization step: 4899. Total energy = 1078 kcal/mol (1076 without restraints) Performing minimization step: 4900. Total energy = 1078 kcal/mol (1076 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/90a3fe85/tmp/apt_refx/apt_refx.pdb ...Done. Performing minimization step: 4901. Total energy = 1078 kcal/mol (1076 without restraints) Performing minimization step: 4902. Total energy = 1078 kcal/mol (1076 without restraints) Performing minimization step: 4903. Total energy = 1078 kcal/mol (1076 without restraints) Performing minimization step: 4904. Total energy = 1078 kcal/mol (1076 without restraints) Performing minimization step: 4905. Total energy = 1078 kcal/mol (1076 without restraints) Performing minimization step: 4906. Total energy = 1078 kcal/mol (1076 without restraints) Performing minimization step: 4907. Total energy = 1078 kcal/mol (1076 without restraints) Performing minimization step: 4908. Total energy = 1078 kcal/mol (1076 without restraints) Performing minimization step: 4909. Total energy = 1078 kcal/mol (1076 without restraints) Performing minimization step: 4910. Total energy = 1078 kcal/mol (1076 without restraints) Performing minimization step: 4911. Total energy = 1078 kcal/mol (1076 without restraints) Performing minimization step: 4912. Total energy = 1078 kcal/mol (1076 without restraints) Performing minimization step: 4913. Total energy = 1078 kcal/mol (1076 without restraints) Performing minimization step: 4914. Total energy = 1078 kcal/mol (1076 without restraints) Performing minimization step: 4915. Total energy = 1078 kcal/mol (1076 without restraints) Performing minimization step: 4916. Total energy = 1078 kcal/mol (1076 without restraints) Performing minimization step: 4917. Total energy = 1078 kcal/mol (1076 without restraints) Performing minimization step: 4918. Total energy = 1078 kcal/mol (1076 without restraints) Performing minimization step: 4919. Total energy = 1078 kcal/mol (1076 without restraints) Performing minimization step: 4920. Total energy = 1078 kcal/mol (1076 without restraints) Performing minimization step: 4921. Total energy = 1078 kcal/mol (1076 without restraints) Performing minimization step: 4922. Total energy = 1078 kcal/mol (1075 without restraints) Performing minimization step: 4923. Total energy = 1078 kcal/mol (1075 without restraints) Performing minimization step: 4924. Total energy = 1077 kcal/mol (1075 without restraints) Performing minimization step: 4925. Total energy = 1077 kcal/mol (1075 without restraints) Performing minimization step: 4926. Total energy = 1077 kcal/mol (1075 without restraints) Performing minimization step: 4927. Total energy = 1077 kcal/mol (1075 without restraints) Performing minimization step: 4928. Total energy = 1077 kcal/mol (1075 without restraints) Performing minimization step: 4929. Total energy = 1077 kcal/mol (1075 without restraints) Performing minimization step: 4930. Total energy = 1077 kcal/mol (1075 without restraints) Performing minimization step: 4931. Total energy = 1077 kcal/mol (1075 without restraints) Performing minimization step: 4932. Total energy = 1077 kcal/mol (1075 without restraints) Performing minimization step: 4933. Total energy = 1077 kcal/mol (1075 without restraints) Performing minimization step: 4934. Total energy = 1077 kcal/mol (1075 without restraints) Performing minimization step: 4935. Total energy = 1077 kcal/mol (1075 without restraints) Performing minimization step: 4936. Total energy = 1077 kcal/mol (1075 without restraints) Performing minimization step: 4937. Total energy = 1077 kcal/mol (1075 without restraints) Performing minimization step: 4938. Total energy = 1077 kcal/mol (1075 without restraints) Performing minimization step: 4939. Total energy = 1077 kcal/mol (1075 without restraints) Performing minimization step: 4940. Total energy = 1077 kcal/mol (1075 without restraints) Performing minimization step: 4941. Total energy = 1077 kcal/mol (1075 without restraints) Performing minimization step: 4942. Total energy = 1077 kcal/mol (1075 without restraints) Performing minimization step: 4943. Total energy = 1077 kcal/mol (1075 without restraints) Performing minimization step: 4944. Total energy = 1077 kcal/mol (1075 without restraints) Performing minimization step: 4945. Total energy = 1077 kcal/mol (1075 without restraints) Performing minimization step: 4946. Total energy = 1077 kcal/mol (1075 without restraints) Performing minimization step: 4947. Total energy = 1077 kcal/mol (1075 without restraints) Performing minimization step: 4948. Total energy = 1077 kcal/mol (1075 without restraints) Performing minimization step: 4949. Total energy = 1077 kcal/mol (1075 without restraints) Performing minimization step: 4950. Total energy = 1077 kcal/mol (1075 without restraints) Performing minimization step: 4951. Total energy = 1077 kcal/mol (1075 without restraints) Performing minimization step: 4952. Total energy = 1077 kcal/mol (1075 without restraints) Performing minimization step: 4953. Total energy = 1077 kcal/mol (1075 without restraints) Performing minimization step: 4954. Total energy = 1077 kcal/mol (1075 without restraints) Performing minimization step: 4955. Total energy = 1077 kcal/mol (1075 without restraints) Performing minimization step: 4956. Total energy = 1077 kcal/mol (1075 without restraints) Performing minimization step: 4957. Total energy = 1077 kcal/mol (1075 without restraints) Performing minimization step: 4958. Total energy = 1077 kcal/mol (1075 without restraints) Performing minimization step: 4959. Total energy = 1077 kcal/mol (1075 without restraints) Performing minimization step: 4960. Total energy = 1077 kcal/mol (1075 without restraints) Performing minimization step: 4961. Total energy = 1077 kcal/mol (1075 without restraints) Performing minimization step: 4962. Total energy = 1077 kcal/mol (1075 without restraints) Performing minimization step: 4963. Total energy = 1077 kcal/mol (1075 without restraints) Performing minimization step: 4964. Total energy = 1077 kcal/mol (1075 without restraints) Performing minimization step: 4965. Total energy = 1077 kcal/mol (1075 without restraints) Performing minimization step: 4966. Total energy = 1077 kcal/mol (1075 without restraints) Performing minimization step: 4967. Total energy = 1077 kcal/mol (1075 without restraints) Performing minimization step: 4968. Total energy = 1077 kcal/mol (1075 without restraints) Performing minimization step: 4969. Total energy = 1077 kcal/mol (1075 without restraints) Performing minimization step: 4970. Total energy = 1077 kcal/mol (1075 without restraints) Performing minimization step: 4971. Total energy = 1077 kcal/mol (1075 without restraints) Performing minimization step: 4972. Total energy = 1077 kcal/mol (1075 without restraints) Performing minimization step: 4973. Total energy = 1077 kcal/mol (1075 without restraints) Performing minimization step: 4974. Total energy = 1077 kcal/mol (1074 without restraints) Performing minimization step: 4975. Total energy = 1077 kcal/mol (1074 without restraints) Performing minimization step: 4976. Total energy = 1077 kcal/mol (1074 without restraints) Performing minimization step: 4977. Total energy = 1076 kcal/mol (1074 without restraints) Performing minimization step: 4978. Total energy = 1076 kcal/mol (1074 without restraints) Performing minimization step: 4979. Total energy = 1076 kcal/mol (1074 without restraints) Performing minimization step: 4980. Total energy = 1076 kcal/mol (1074 without restraints) Performing minimization step: 4981. Total energy = 1076 kcal/mol (1074 without restraints) Performing minimization step: 4982. Total energy = 1076 kcal/mol (1074 without restraints) Performing minimization step: 4983. Total energy = 1076 kcal/mol (1074 without restraints) Performing minimization step: 4984. Total energy = 1076 kcal/mol (1074 without restraints) Performing minimization step: 4985. Total energy = 1076 kcal/mol (1074 without restraints) Performing minimization step: 4986. Total energy = 1076 kcal/mol (1074 without restraints) Performing minimization step: 4987. Total energy = 1076 kcal/mol (1074 without restraints) Performing minimization step: 4988. Total energy = 1076 kcal/mol (1074 without restraints) Performing minimization step: 4989. Total energy = 1076 kcal/mol (1074 without restraints) Performing minimization step: 4990. Total energy = 1076 kcal/mol (1074 without restraints) Performing minimization step: 4991. Total energy = 1076 kcal/mol (1074 without restraints) Performing minimization step: 4992. Total energy = 1076 kcal/mol (1074 without restraints) Performing minimization step: 4993. Total energy = 1076 kcal/mol (1074 without restraints) Performing minimization step: 4994. Total energy = 1076 kcal/mol (1074 without restraints) Performing minimization step: 4995. Total energy = 1076 kcal/mol (1074 without restraints) Performing minimization step: 4996. Total energy = 1076 kcal/mol (1074 without restraints) Performing minimization step: 4997. Total energy = 1076 kcal/mol (1074 without restraints) Performing minimization step: 4998. Total energy = 1076 kcal/mol (1074 without restraints) Performing minimization step: 4999. Total energy = 1076 kcal/mol (1074 without restraints) Performing minimization step: 5000. Total energy = 1076 kcal/mol (1074 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/90a3fe85/tmp/apt_refx/apt_refx.pdb ...Done. /home/ubuntu/rna-tools//opt/qrnas/ Save to apt_refx.pdb DONE!