============================================================================= Reading config file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/97a58f6c/tmp/complex_refx/configfile.txt ============================================================================= ----------------------------------------------------------------------------- Warning: Non-parallel version of QRNA cannot spawn threads. Warning: More threads than cores available. Parameters to be used: Number of minimization steps (NSTEPS): 5000 Golden section step sizes: maximal (MAXSTEP): 0.0001 minimal (MINSTEP): 1e-08 Verbosity (VERBOSE): 1 Write output every: 100 steps (WRITEFREQ) Record trajectory (TRAJECTORY): disabled Pedantic treatment of molecules (PEDANTICMOL): disabled Van der Waals cutoff radius (CUTOFF): 12 Born generalized solvent (USEBORN): disabled Constraints on secondary struct. (SSCONSTR): enabled Auto-detection of secondary struct. (SSDETECT): enabled Secondary structure (SECSTRUCT): none specified Hydrogen bonds (HBONDS): enabled Electrostatics (ELECTR): enabled van der Waals interactions (VANDERWAALS): enabled Anti-blow-up protection (BLOWGUARD): enabled Occupancy as positional restraint (POSRESTRAINTS): disabled Restraints description (RESTRFILE): none Number of parallel threads: 1 ----------------------------------------------------------------------------- Internal Warning: unknown atom type(s) in bond: C2 H5 Internal Warning: unknown atom type(s) in bond: C2 N* Internal Warning: unknown atom type(s) in bond: C2 NB Internal Warning: unknown atom type(s) in bond: C C1 Internal Warning: unknown atom type(s) in bond: CA C1 Internal Warning: unknown atom type(s) in bond: C1 C1 Internal Warning: unknown atom type(s) in bond: C1 CT Internal Warning: unknown atom type(s) in bond: C1 HA Internal Warning: unknown atom type(s) in bond: C1 H4 Internal Warning: unknown atom type(s) in bond: C1 N* Internal Warning: unknown atoms in angle: H5 C2 N* Internal Warning: unknown atoms in angle: H5 C2 NB Internal Warning: unknown atoms in angle: N* C2 NB Internal Warning: unknown atoms in angle: CB N* C2 Internal Warning: unknown atoms in angle: C2 N* CT Internal Warning: unknown atoms in angle: CB NB C2 Internal Warning: unknown atoms in angle: C1 C NA Internal Warning: unknown atoms in angle: C1 C O Internal Warning: unknown atoms in angle: C1 CA N2 Internal Warning: unknown atoms in angle: C1 CA NC Internal Warning: unknown atoms in angle: C C1 C1 Internal Warning: unknown atoms in angle: C C1 CT Internal Warning: unknown atoms in angle: C C1 HA Internal Warning: unknown atoms in angle: C C1 H4 Internal Warning: unknown atoms in angle: CA C1 C1 Internal Warning: unknown atoms in angle: CA C1 HA Internal Warning: unknown atoms in angle: CA C1 H4 Internal Warning: unknown atoms in angle: C1 C1 CT Internal Warning: unknown atoms in angle: C1 C1 HA Internal Warning: unknown atoms in angle: C1 C1 H4 Internal Warning: unknown atoms in angle: C1 C1 N* Internal Warning: unknown atoms in angle: H4 C1 N* Internal Warning: unknown atoms in angle: H1 CT C1 Internal Warning: unknown atoms in angle: HC CT C1 Internal Warning: unknown atoms in angle: C N* C1 Internal Warning: unknown atoms in angle: C1 N* CT Internal Warning: unknown atom(s) in dihedral: X C2 N* X Internal Warning: unknown atom(s) in dihedral: X C2 NB X Internal Warning: unknown atom(s) in dihedral: X C C1 X Internal Warning: unknown atom(s) in dihedral: X CA C1 X Internal Warning: unknown atom(s) in dihedral: X C1 C1 X Internal Warning: unknown atom(s) in dihedral: X C1 CT X Internal Warning: unknown atom(s) in dihedral: X C1 N* X Internal Warning: unknown atom(s) in dihedral: HC CT C1 C1 Internal Warning: unknown atom(s) in dihedral: HC CT C1 C1 Internal Warning: unknown atom(s) in dihedral: C1 C1 C O Internal Warning: unknown atom(s) in dihedral: C1 C1 C O Internal Warning: unknown atom(s) in dihedral: OS CT N* C2 Internal Warning: unknown atom(s) in dihedral: OS CT N* C2 Internal Warning: unknown atom(s) in dihedral: OS CT N* C2 Internal Warning: unknown atom(s) in dihedral: OS CT N* C1 Internal Warning: unknown atom(s) in dihedral: OS CT N* C1 Internal Warning: unknown atom(s) in dihedral: OS CT N* C1 Internal Warning: unknown atom(s) in dihedral: OS CT N* C1 Internal Warning: unknown atom(s) in improper: C C1 N* CT Internal Warning: unknown atom(s) in improper: C C1 C1 CT Internal Warning: unknown atom(s) in improper: C1 N2 CA NC Initializing... Generic atom descriptions read: 47 Generic bond descriptions read: 199 Generic angle descriptions read: 567 Generic dihedral descriptions read: 812 Generic improper descriptions read: 116 Generic vdW descriptions read: 47 ----------------------------------------------------------------------------- ============================================================================= Reading PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/97a58f6c/tmp/complex_refx/complex.pdb ============================================================================= Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: PRO Error: unknown residue: PRO Error: unknown residue: PRO Error: unknown residue: PRO Error: unknown residue: PRO Error: unknown residue: PRO Error: unknown residue: PRO Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: ALA Error: unknown residue: ALA Error: unknown residue: ALA Error: unknown residue: ALA Error: unknown residue: ALA Error: unknown residue: ALA Error: unknown residue: ALA Error: unknown residue: ALA Error: unknown residue: ALA Error: unknown residue: ALA Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: PRO Error: unknown residue: PRO Error: unknown residue: PRO Error: unknown residue: PRO Error: unknown residue: PRO Error: unknown residue: PRO Error: unknown residue: PRO Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: GLY Error: unknown residue: GLY Error: unknown residue: GLY Error: unknown residue: GLY Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: CYS Error: unknown residue: CYS Error: unknown residue: CYS Error: unknown residue: CYS Error: unknown residue: CYS Error: unknown residue: CYS Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: THR Error: unknown residue: THR Error: unknown residue: THR Error: unknown residue: THR Error: unknown residue: THR Error: unknown residue: THR Error: unknown residue: THR Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: GLY Error: unknown residue: GLY Error: unknown residue: GLY Error: unknown residue: GLY Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: ALA Error: unknown residue: ALA Error: unknown residue: ALA Error: unknown residue: ALA Error: unknown residue: ALA Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: CYS Error: unknown residue: CYS Error: unknown residue: CYS Error: unknown residue: CYS Error: unknown residue: CYS Error: unknown residue: CYS Error: unknown residue: MET Error: unknown residue: MET Error: unknown residue: MET Error: unknown residue: MET Error: unknown residue: MET Error: unknown residue: MET Error: unknown residue: MET Error: unknown residue: MET Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: GLY Error: unknown residue: GLY Error: unknown residue: GLY Error: unknown residue: GLY Error: unknown residue: PRO Error: unknown residue: PRO Error: unknown residue: PRO Error: unknown residue: PRO Error: unknown residue: PRO Error: unknown residue: PRO Error: unknown residue: PRO Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: GLY Error: unknown residue: GLY Error: unknown residue: GLY Error: unknown residue: GLY Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: GLY Error: unknown residue: GLY Error: unknown residue: GLY Error: unknown residue: GLY Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: CYS Error: unknown residue: CYS Error: unknown residue: CYS Error: unknown residue: CYS Error: unknown residue: CYS Error: unknown residue: CYS Error: unknown residue: GLY Error: unknown residue: GLY Error: unknown residue: GLY Error: unknown residue: GLY Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: ALA Error: unknown residue: ALA Error: unknown residue: ALA Error: unknown residue: ALA Error: unknown residue: ALA Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: MET Error: unknown residue: MET Error: unknown residue: MET Error: unknown residue: MET Error: unknown residue: MET Error: unknown residue: MET Error: unknown residue: MET Error: unknown residue: MET Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: PRO Error: unknown residue: PRO Error: unknown residue: PRO Error: unknown residue: PRO Error: unknown residue: PRO Error: unknown residue: PRO Error: unknown residue: PRO Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: GLY Error: unknown residue: GLY Error: unknown residue: GLY Error: unknown residue: GLY Error: unknown residue: THR Error: unknown residue: THR Error: unknown residue: THR Error: unknown residue: THR Error: unknown residue: THR Error: unknown residue: THR Error: unknown residue: THR Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: ALA Error: unknown residue: ALA Error: unknown residue: ALA Error: unknown residue: ALA Error: unknown residue: ALA Error: unknown residue: GLY Error: unknown residue: GLY Error: unknown residue: GLY Error: unknown residue: GLY Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: GLN Error: unknown residue: GLN Error: unknown residue: GLN Error: unknown residue: GLN Error: unknown residue: GLN Error: unknown residue: GLN Error: unknown residue: GLN Error: unknown residue: GLN Error: unknown residue: GLN Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: GLY Error: unknown residue: GLY Error: unknown residue: GLY Error: unknown residue: GLY Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: GLN Error: unknown residue: GLN Error: unknown residue: GLN Error: unknown residue: GLN Error: unknown residue: GLN Error: unknown residue: GLN Error: unknown residue: GLN Error: unknown residue: GLN Error: unknown residue: GLN Error: unknown residue: GLN Error: unknown residue: GLN Error: unknown residue: GLN Error: unknown residue: GLN Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: TRP Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: PRO Error: unknown residue: PRO Error: unknown residue: PRO Error: unknown residue: PRO Error: unknown residue: PRO Error: unknown residue: PRO Error: unknown residue: PRO Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: GLN Error: unknown residue: GLN Error: unknown residue: GLN Error: unknown residue: GLN Error: unknown residue: GLN Error: unknown residue: GLN Error: unknown residue: GLN Error: unknown residue: GLN Error: unknown residue: GLN Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: PRO Error: unknown residue: PRO Error: unknown residue: PRO Error: unknown residue: PRO Error: unknown residue: PRO Error: unknown residue: PRO Error: unknown residue: PRO Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: THR Error: unknown residue: THR Error: unknown residue: THR Error: unknown residue: THR Error: unknown residue: THR Error: unknown residue: THR Error: unknown residue: THR Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: ASN Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: THR Error: unknown residue: THR Error: unknown residue: THR Error: unknown residue: THR Error: unknown residue: THR Error: unknown residue: THR Error: unknown residue: THR Error: unknown residue: GLN Error: unknown residue: GLN Error: unknown residue: GLN Error: unknown residue: GLN Error: unknown residue: GLN Error: unknown residue: GLN Error: unknown residue: GLN Error: unknown residue: GLN Error: unknown residue: GLN Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: PRO Error: unknown residue: PRO Error: unknown residue: PRO Error: unknown residue: PRO Error: unknown residue: PRO Error: unknown residue: PRO Error: unknown residue: PRO Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: ALA Error: unknown residue: ALA Error: unknown residue: ALA Error: unknown residue: ALA Error: unknown residue: ALA Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: GLN Error: unknown residue: GLN Error: unknown residue: GLN Error: unknown residue: GLN Error: unknown residue: GLN Error: unknown residue: GLN Error: unknown residue: GLN Error: unknown residue: GLN Error: unknown residue: GLN Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LEU Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: THR Error: unknown residue: THR Error: unknown residue: THR Error: unknown residue: THR Error: unknown residue: THR Error: unknown residue: THR Error: unknown residue: THR Error: unknown residue: THR Error: unknown residue: THR Error: unknown residue: THR Error: unknown residue: THR Error: unknown residue: THR Error: unknown residue: THR Error: unknown residue: THR Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: SER Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: ILE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: ASP Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: PHE Error: unknown residue: ALA Error: unknown residue: ALA Error: unknown residue: ALA Error: unknown residue: ALA Error: unknown residue: ALA Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: HIS Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: TYR Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: GLN Error: unknown residue: GLN Error: unknown residue: GLN Error: unknown residue: GLN Error: unknown residue: GLN Error: unknown residue: GLN Error: unknown residue: GLN Error: unknown residue: GLN Error: unknown residue: GLN Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: VAL Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: ARG Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: LYS Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue: GLU Error: unknown residue(s). Molecule discarded. Atom's 1415 H5'2 residue renamed to RU3 Atom's 1414 H5'1 residue renamed to RU3 Atom's 1413 H4' residue renamed to RU3 Atom's 1412 H3' residue renamed to RU3 Atom's 1411 H2' residue renamed to RU3 Atom's 1410 H1' residue renamed to RU3 Atom's 1409 H6 residue renamed to RU3 Atom's 1408 H5 residue renamed to RU3 Atom's 1407 H3 residue renamed to RU3 Atom's 1406 HO'2 residue renamed to RU3 Atom's 1405 OP2 residue renamed to RU3 Atom's 1404 OP1 residue renamed to RU3 Atom's 1403 C6 residue renamed to RU3 Atom's 1402 C5 residue renamed to RU3 Atom's 1401 O4 residue renamed to RU3 Atom's 1400 C4 residue renamed to RU3 Atom's 1399 N3 residue renamed to RU3 Atom's 1398 O2 residue renamed to RU3 Atom's 1397 C2 residue renamed to RU3 Atom's 1396 N1 residue renamed to RU3 Atom's 1395 C1' residue renamed to RU3 Atom's 1394 O2' residue renamed to RU3 Atom's 1393 C2' residue renamed to RU3 Atom's 1392 O3' residue renamed to RU3 Atom's 1391 C3' residue renamed to RU3 Atom's 1390 O4' residue renamed to RU3 Atom's 1389 C4' residue renamed to RU3 Atom's 1388 O5' residue renamed to RU3 Atom's 1387 C5' residue renamed to RU3 Atom's 1386 P residue renamed to RU3 Error: recognition of atom ATOM 1614 C9 6MA A 161 ... failed. Atom erased. Missing atom added: ATOM 1 P G A 159 14.699 -13.100 0.268 1.00 0.00 P Missing atom added: ATOM 24 H5'1 G A 159 15.584 -14.731 -1.874 1.00 0.00 H Missing atom added: ATOM 25 H5'2 G A 159 15.035 -13.141 -2.650 1.00 0.00 H Missing atom added: ATOM 26 H4' G A 159 14.605 -14.979 -4.029 1.00 0.00 H Missing atom added: ATOM 27 H3' G A 159 12.064 -13.743 -2.971 1.00 0.00 H Missing atom added: ATOM 30 H1' G A 159 12.467 -17.457 -4.071 1.00 0.00 H Missing atom added: ATOM 28 H2' G A 159 10.968 -15.307 -4.612 1.00 0.00 H Missing atom added: ATOM 29 HO'2 G A 159 13.118 -14.947 -5.888 1.00 0.00 H Missing atom added: ATOM 31 H8 G A 159 12.513 -15.895 -0.715 1.00 0.00 H Missing atom added: ATOM 34 H1 G A 159 6.173 -18.123 -2.092 1.00 0.00 H Missing atom added: ATOM 32 H21 G A 159 7.902 -18.162 -5.298 1.00 0.00 H Missing atom added: ATOM 33 H22 G A 159 6.479 -17.966 -4.440 1.00 0.00 H Missing atom added: ATOM 24 H5'1 G A 160 11.716 -13.628 -6.949 1.00 0.00 H Missing atom added: ATOM 25 H5'2 G A 160 10.945 -12.024 -7.462 1.00 0.00 H Missing atom added: ATOM 26 H4' G A 160 9.846 -13.605 -8.528 1.00 0.00 H Missing atom added: ATOM 27 H3' G A 160 8.328 -11.961 -6.451 1.00 0.00 H Missing atom added: ATOM 30 H1' G A 160 7.302 -15.541 -7.157 1.00 0.00 H Missing atom added: ATOM 28 H2' G A 160 6.295 -12.961 -7.196 1.00 0.00 H Missing atom added: ATOM 29 HO'2 G A 160 7.428 -13.091 -9.390 1.00 0.00 H Missing atom added: ATOM 31 H8 G A 160 9.012 -13.631 -4.387 1.00 0.00 H Missing atom added: ATOM 34 H1 G A 160 2.874 -16.266 -2.692 1.00 0.00 H Missing atom added: ATOM 32 H21 G A 160 3.224 -16.831 -6.286 1.00 0.00 H Missing atom added: ATOM 33 H22 G A 160 2.212 -16.506 -4.994 1.00 0.00 H Missing atom added: HETATM 23 H5'1 6MA A 161 5.953 -11.424 -9.719 1.00 0.00 H Missing atom added: HETATM 24 H5'2 6MA A 161 5.407 -9.653 -9.756 1.00 0.00 H Missing atom added: HETATM 25 H4' 6MA A 161 3.624 -11.148 -9.885 1.00 0.00 H Missing atom added: HETATM 26 H3' 6MA A 161 3.148 -10.481 -10.843 1.00 0.00 H Missing atom added: HETATM 29 H1' 6MA A 161 1.610 -10.487 -7.181 1.00 0.00 H Missing atom added: HETATM 27 H2' 6MA A 161 0.954 -10.954 -10.255 1.00 0.00 H Missing atom added: HETATM 28 HO'2 6MA A 161 1.603 -13.001 -9.256 1.00 0.00 H Missing atom added: HETATM 30 H8 6MA A 161 1.869 -7.824 -9.416 1.00 0.00 H Missing atom added: HETATM 31 H61 6MA A 161 -0.939 -5.315 -6.431 1.00 0.00 H Missing atom added: HETATM 33 C61 6MA A 161 -2.149 -5.412 -4.694 1.00 0.00 C Missing atom added: HETATM 34 H11 6MA A 161 -2.290 -4.370 -4.920 1.00 0.00 H Missing atom added: HETATM 35 H12 6MA A 161 -3.096 -5.924 -4.713 1.00 0.00 H Missing atom added: HETATM 36 H13 6MA A 161 -1.704 -5.521 -3.720 1.00 0.00 H Missing atom added: HETATM 32 H2 6MA A 161 -0.988 -10.027 -4.056 1.00 0.00 H Missing atom added: ATOM 21 H5'1 C A 162 2.304 -15.099 -11.850 1.00 0.00 H Missing atom added: ATOM 22 H5'2 C A 162 3.279 -15.322 -13.410 1.00 0.00 H Missing atom added: ATOM 23 H4' C A 162 2.252 -16.506 -14.101 1.00 0.00 H Missing atom added: ATOM 24 H3' C A 162 2.387 -17.548 -13.591 1.00 0.00 H Missing atom added: ATOM 27 H1' C A 162 3.769 -15.903 -16.954 1.00 0.00 H Missing atom added: ATOM 25 H2' C A 162 2.432 -18.392 -15.837 1.00 0.00 H Missing atom added: ATOM 26 HO'2 C A 162 0.713 -16.718 -16.397 1.00 0.00 H Missing atom added: ATOM 30 H6 C A 162 5.102 -16.309 -18.060 1.00 0.00 H Missing atom added: ATOM 28 H41 C A 162 9.124 -18.641 -17.188 1.00 0.00 H Missing atom added: ATOM 29 H42 C A 162 8.898 -19.163 -15.573 1.00 0.00 H Missing atom added: ATOM 31 H5 C A 162 7.551 -17.249 -18.738 1.00 0.00 H Missing atom added: ATOM 31 H3T RU3 A 168 -7.532 -34.966 -0.624 1.00 0.00 H Missing atom added: ATOM 22 OP3 A A 123 -7.608 -18.079 -7.904 1.00 0.00 O Number of atoms: 1464 Number of residues: 46 Building intraresidual bonds... Warning: Bond expected, but some of the atoms are missing: P OP2, residue No. A 159 Warning: Bond expected, but some of the atoms are missing: P OP1, residue No. A 159 Building intraresidual angles... Warning: Angle expected, but some of the atoms are missing: OP2 P O5', residue No. A 159 Warning: Angle expected, but some of the atoms are missing: OP1 P O5', residue No. A 159 Warning: Angle expected, but some of the atoms are missing: OP1 P OP2, residue No. A 159 Building intraresidual dihedrals... Warning: Dihedral expected, but some of the atoms are missing: OP2 P O5' C5', residue No. A 159 Warning: Dihedral expected, but some of the atoms are missing: OP1 P O5' C5', residue No. A 159 Building intraresidual impropers... Building interresidual bonds... Building interresidual angles... Internal Warning: unknown atoms in angle: H5 C2 N* Internal Warning: unknown atoms in angle: H5 C2 NB Internal Warning: unknown atoms in angle: N* C2 NB Internal Warning: unknown atoms in angle: CB N* C2 Internal Warning: unknown atoms in angle: C2 N* CT Internal Warning: unknown atoms in angle: CB NB C2 Internal Warning: unknown atoms in angle: C1 C NA Internal Warning: unknown atoms in angle: C1 C O Internal Warning: unknown atoms in angle: C1 CA N2 Internal Warning: unknown atoms in angle: C1 CA NC Internal Warning: unknown atoms in angle: C C1 C1 Internal Warning: unknown atoms in angle: C C1 CT Internal Warning: unknown atoms in angle: C C1 HA Internal Warning: unknown atoms in angle: C C1 H4 Internal Warning: unknown atoms in angle: CA C1 C1 Internal Warning: unknown atoms in angle: CA C1 HA Internal Warning: unknown atoms in angle: CA C1 H4 Internal Warning: unknown atoms in angle: C1 C1 CT Internal Warning: unknown atoms in angle: C1 C1 HA Internal Warning: unknown atoms in angle: C1 C1 H4 Internal Warning: unknown atoms in angle: C1 C1 N* Internal Warning: unknown atoms in angle: H4 C1 N* Internal Warning: unknown atoms in angle: H1 CT C1 Internal Warning: unknown atoms in angle: HC CT C1 Internal Warning: unknown atoms in angle: C N* C1 Internal Warning: unknown atoms in angle: C1 N* CT Building interresidual dihedrals... Internal Warning: unknown atom(s) in dihedral: X C2 N* X Internal Warning: unknown atom(s) in dihedral: X C2 NB X Internal Warning: unknown atom(s) in dihedral: X C C1 X Internal Warning: unknown atom(s) in dihedral: X CA C1 X Internal Warning: unknown atom(s) in dihedral: X C1 C1 X Internal Warning: unknown atom(s) in dihedral: X C1 CT X Internal Warning: unknown atom(s) in dihedral: X C1 N* X Internal Warning: unknown atom(s) in dihedral: HC CT C1 C1 Internal Warning: unknown atom(s) in dihedral: HC CT C1 C1 Internal Warning: unknown atom(s) in dihedral: C1 C1 C O Internal Warning: unknown atom(s) in dihedral: C1 C1 C O Internal Warning: unknown atom(s) in dihedral: OS CT N* C2 Internal Warning: unknown atom(s) in dihedral: OS CT N* C2 Internal Warning: unknown atom(s) in dihedral: OS CT N* C2 Internal Warning: unknown atom(s) in dihedral: OS CT N* C1 Internal Warning: unknown atom(s) in dihedral: OS CT N* C1 Internal Warning: unknown atom(s) in dihedral: OS CT N* C1 Internal Warning: unknown atom(s) in dihedral: OS CT N* C1 Number of bonds built: 1577 Number of angles built: 2823 Number of dihedrals built: 4297 Number of impropers built: 305 ----------------------------------------------------------------------------- End of molecule (chain) ----------------------------------------------------------------------------- ----------------------------------------------------------------------------- Building interresidual nonbonded pairs & H-bonds (it may take a while)... Number of electrostatic pairs: 1066516 Number of van der Waals pairs: 170765 Number of H-bonds built: 38 Number of spring restraints: 0 Number of positional restraints: 0 Number of base pairs built: 14 Number of molecules (chains) read: 1 ----------------------------------------------------------------------------- Performing minimization step: 1. Total energy = 25089.5261 kcal/mol (25049.1819 without restraints) Performing minimization step: 2. Total energy = 24843.2365 kcal/mol (24803.8630 without restraints) Performing minimization step: 3. Total energy = 24604.9350 kcal/mol (24566.4770 without restraints) Performing minimization step: 4. Total energy = 24374.1726 kcal/mol (24336.5794 without restraints) Performing minimization step: 5. Total energy = 24150.5390 kcal/mol (24113.7642 without restraints) Performing minimization step: 6. Total energy = 23933.6581 kcal/mol (23897.6593 without restraints) Performing minimization step: 7. Total energy = 23723.1851 kcal/mol (23687.9234 without restraints) Performing minimization step: 8. Total energy = 23518.8029 kcal/mol (23484.2423 without restraints) Performing minimization step: 9. Total energy = 23320.2190 kcal/mol (23286.3264 without restraints) Performing minimization step: 10. Total energy = 23127.1631 kcal/mol (23093.9078 without restraints) Performing minimization step: 11. Total energy = 22939.3855 kcal/mol (22906.7391 without restraints) Performing minimization step: 12. Total energy = 22756.6538 kcal/mol (22724.5900 without restraints) Performing minimization step: 13. Total energy = 22578.7523 kcal/mol (22547.2464 without restraints) Performing minimization step: 14. Total energy = 22405.4796 kcal/mol (22374.5087 without restraints) Performing minimization step: 15. Total energy = 22236.6480 kcal/mol (22206.1906 without restraints) Performing minimization step: 16. Total energy = 22072.0811 kcal/mol (22042.1172 without restraints) Performing minimization step: 17. Total energy = 21911.6141 kcal/mol (21882.1249 without restraints) Performing minimization step: 18. Total energy = 21755.0921 kcal/mol (21726.0596 without restraints) Performing minimization step: 19. Total energy = 21602.3689 kcal/mol (21573.7766 without restraints) Performing minimization step: 20. Total energy = 21453.3069 kcal/mol (21425.1390 without restraints) Performing minimization step: 21. Total energy = 21307.7761 kcal/mol (21280.0176 without restraints) Performing minimization step: 22. Total energy = 21165.6534 kcal/mol (21138.2902 without restraints) Performing minimization step: 23. Total energy = 21026.8224 kcal/mol (20999.8411 without restraints) Performing minimization step: 24. Total energy = 20891.1718 kcal/mol (20864.5596 without restraints) Performing minimization step: 25. Total energy = 20758.5966 kcal/mol (20732.3415 without restraints) Performing minimization step: 26. Total energy = 20628.9967 kcal/mol (20603.0870 without restraints) Performing minimization step: 27. Total energy = 20502.2765 kcal/mol (20476.7014 without restraints) Performing minimization step: 28. Total energy = 20378.3450 kcal/mol (20353.0938 without restraints) Performing minimization step: 29. Total energy = 20257.1151 kcal/mol (20232.1778 without restraints) Performing minimization step: 30. Total energy = 20138.5030 kcal/mol (20113.8701 without restraints) Performing minimization step: 31. Total energy = 20022.4300 kcal/mol (19998.0922 without restraints) Performing minimization step: 32. Total energy = 19908.8192 kcal/mol (19884.7677 without restraints) Performing minimization step: 33. Total energy = 19797.5970 kcal/mol (19773.8230 without restraints) Performing minimization step: 34. Total energy = 19688.6934 kcal/mol (19665.1894 without restraints) Performing minimization step: 35. Total energy = 19582.0410 kcal/mol (19558.7989 without restraints) Performing minimization step: 36. Total energy = 19477.5746 kcal/mol (19454.5868 without restraints) Performing minimization step: 37. Total energy = 19375.2315 kcal/mol (19352.4908 without restraints) Performing minimization step: 38. Total energy = 19274.9515 kcal/mol (19252.4509 without restraints) Performing minimization step: 39. Total energy = 19176.6766 kcal/mol (19154.4094 without restraints) Performing minimization step: 40. Total energy = 19080.3504 kcal/mol (19058.3101 without restraints) Performing minimization step: 41. Total energy = 18985.9189 kcal/mol (18964.0991 without restraints) Performing minimization step: 42. Total energy = 18893.3300 kcal/mol (18871.7249 without restraints) Performing minimization step: 43. Total energy = 18802.5333 kcal/mol (18781.1369 without restraints) Performing minimization step: 44. Total energy = 18713.4798 kcal/mol (18692.2864 without restraints) Performing minimization step: 45. Total energy = 18626.1224 kcal/mol (18605.1266 without restraints) Performing minimization step: 46. Total energy = 18540.4157 kcal/mol (18519.6122 without restraints) Performing minimization step: 47. Total energy = 18456.3153 kcal/mol (18435.6989 without restraints) Performing minimization step: 48. Total energy = 18373.7784 kcal/mol (18353.3441 without restraints) Performing minimization step: 49. Total energy = 18292.7634 kcal/mol (18272.5065 without restraints) Performing minimization step: 50. Total energy = 18213.2302 kcal/mol (18193.1460 without restraints) Performing minimization step: 51. Total energy = 18135.1398 kcal/mol (18115.2236 without restraints) Performing minimization step: 52. Total energy = 18058.4542 kcal/mol (18038.7018 without restraints) Performing minimization step: 53. Total energy = 17983.1368 kcal/mol (17963.5439 without restraints) Performing minimization step: 54. Total energy = 17909.1520 kcal/mol (17889.7144 without restraints) Performing minimization step: 55. Total energy = 17836.4651 kcal/mol (17817.1788 without restraints) Performing minimization step: 56. Total energy = 17765.0425 kcal/mol (17745.9036 without restraints) Performing minimization step: 57. Total energy = 17694.8514 kcal/mol (17675.8560 without restraints) Performing minimization step: 58. Total energy = 17625.8600 kcal/mol (17607.0046 without restraints) Performing minimization step: 59. Total energy = 17558.0379 kcal/mol (17539.3188 without restraints) Performing minimization step: 60. Total energy = 17491.3548 kcal/mol (17472.7685 without restraints) Performing minimization step: 61. Total energy = 17425.7814 kcal/mol (17407.3244 without restraints) Performing minimization step: 62. Total energy = 17361.2893 kcal/mol (17342.9586 without restraints) Performing minimization step: 63. Total energy = 17297.8511 kcal/mol (17279.6432 without restraints) Performing minimization step: 64. Total energy = 17235.4398 kcal/mol (17217.3517 without restraints) Performing minimization step: 65. Total energy = 17174.0291 kcal/mol (17156.0577 without restraints) Performing minimization step: 66. Total energy = 17113.5931 kcal/mol (17095.7355 without restraints) Performing minimization step: 67. Total energy = 17054.1080 kcal/mol (17036.3612 without restraints) Performing minimization step: 68. Total energy = 16995.5490 kcal/mol (16977.9103 without restraints) Performing minimization step: 69. Total energy = 16937.8929 kcal/mol (16920.3596 without restraints) Performing minimization step: 70. Total energy = 16881.1165 kcal/mol (16863.6857 without restraints) Performing minimization step: 71. Total energy = 16825.1974 kcal/mol (16807.8666 without restraints) Performing minimization step: 72. Total energy = 16770.1138 kcal/mol (16752.8806 without restraints) Performing minimization step: 73. Total energy = 16715.8448 kcal/mol (16698.7066 without restraints) Performing minimization step: 74. Total energy = 16662.3695 kcal/mol (16645.3240 without restraints) Performing minimization step: 75. Total energy = 16609.6679 kcal/mol (16592.7127 without restraints) Performing minimization step: 76. Total energy = 16557.7203 kcal/mol (16540.8531 without restraints) Performing minimization step: 77. Total energy = 16506.5078 kcal/mol (16489.7262 without restraints) Performing minimization step: 78. Total energy = 16456.0115 kcal/mol (16439.3137 without restraints) Performing minimization step: 79. Total energy = 16406.2134 kcal/mol (16389.5970 without restraints) Performing minimization step: 80. Total energy = 16357.0957 kcal/mol (16340.5588 without restraints) Performing minimization step: 81. Total energy = 16308.6412 kcal/mol (16292.1818 without restraints) Performing minimization step: 82. Total energy = 16260.8331 kcal/mol (16244.4492 without restraints) Performing minimization step: 83. Total energy = 16213.6551 kcal/mol (16197.3448 without restraints) Performing minimization step: 84. Total energy = 16167.0909 kcal/mol (16150.8523 without restraints) Performing minimization step: 85. Total energy = 16121.1255 kcal/mol (16104.9566 without restraints) Performing minimization step: 86. Total energy = 16075.7433 kcal/mol (16059.6426 without restraints) Performing minimization step: 87. Total energy = 16030.9299 kcal/mol (16014.8957 without restraints) Performing minimization step: 88. Total energy = 15986.6707 kcal/mol (15970.7013 without restraints) Performing minimization step: 89. Total energy = 15942.9519 kcal/mol (15927.0456 without restraints) Performing minimization step: 90. Total energy = 15899.7595 kcal/mol (15883.9148 without restraints) Performing minimization step: 91. Total energy = 15857.0806 kcal/mol (15841.2960 without restraints) Performing minimization step: 92. Total energy = 15814.9021 kcal/mol (15799.1758 without restraints) Performing minimization step: 93. Total energy = 15773.2112 kcal/mol (15757.5420 without restraints) Performing minimization step: 94. Total energy = 15731.9958 kcal/mol (15716.3821 without restraints) Performing minimization step: 95. Total energy = 15691.2437 kcal/mol (15675.6843 without restraints) Performing minimization step: 96. Total energy = 15650.9433 kcal/mol (15635.4365 without restraints) Performing minimization step: 97. Total energy = 15611.0835 kcal/mol (15595.6284 without restraints) Performing minimization step: 98. Total energy = 15571.6534 kcal/mol (15556.2486 without restraints) Performing minimization step: 99. Total energy = 15532.6420 kcal/mol (15517.2861 without restraints) Performing minimization step: 100. Total energy = 15494.0388 kcal/mol (15478.7307 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/97a58f6c/tmp/complex_refx/complex_refx.pdb ...Done. Performing minimization step: 101. Total energy = 15455.8338 kcal/mol (15440.5724 without restraints) Performing minimization step: 102. Total energy = 15418.0170 kcal/mol (15402.8010 without restraints) Performing minimization step: 103. Total energy = 15380.5787 kcal/mol (15365.4070 without restraints) Performing minimization step: 104. Total energy = 15343.5097 kcal/mol (15328.3813 without restraints) Performing minimization step: 105. Total energy = 15306.8006 kcal/mol (15291.7144 without restraints) Performing minimization step: 106. Total energy = 15270.4428 kcal/mol (15255.3977 without restraints) Performing minimization step: 107. Total energy = 15234.4278 kcal/mol (15219.4229 without restraints) Performing minimization step: 108. Total energy = 15198.7472 kcal/mol (15183.7814 without restraints) Performing minimization step: 109. Total energy = 15163.3930 kcal/mol (15148.4655 without restraints) Performing minimization step: 110. Total energy = 15128.3567 kcal/mol (15113.4666 without restraints) Performing minimization step: 111. Total energy = 15093.6310 kcal/mol (15078.7773 without restraints) Performing minimization step: 112. Total energy = 15059.2084 kcal/mol (15044.3902 without restraints) Performing minimization step: 113. Total energy = 15025.0815 kcal/mol (15010.2980 without restraints) Performing minimization step: 114. Total energy = 14991.2433 kcal/mol (14976.4936 without restraints) Performing minimization step: 115. Total energy = 14957.6869 kcal/mol (14942.9704 without restraints) Performing minimization step: 116. Total energy = 14924.4058 kcal/mol (14909.7216 without restraints) Performing minimization step: 117. Total energy = 14891.3934 kcal/mol (14876.7408 without restraints) Performing minimization step: 118. Total energy = 14858.6435 kcal/mol (14844.0218 without restraints) Performing minimization step: 119. Total energy = 14826.1499 kcal/mol (14811.5583 without restraints) Performing minimization step: 120. Total energy = 14793.9065 kcal/mol (14779.3444 without restraints) Performing minimization step: 121. Total energy = 14761.9075 kcal/mol (14747.3741 without restraints) Performing minimization step: 122. Total energy = 14730.1479 kcal/mol (14715.6426 without restraints) Performing minimization step: 123. Total energy = 14698.6218 kcal/mol (14684.1441 without restraints) Performing minimization step: 124. Total energy = 14667.3239 kcal/mol (14652.8731 without restraints) Performing minimization step: 125. Total energy = 14636.2494 kcal/mol (14621.8248 without restraints) Performing minimization step: 126. Total energy = 14605.3929 kcal/mol (14590.9940 without restraints) Performing minimization step: 127. Total energy = 14574.7498 kcal/mol (14560.3761 without restraints) Performing minimization step: 128. Total energy = 14544.3155 kcal/mol (14529.9663 without restraints) Performing minimization step: 129. Total energy = 14514.0852 kcal/mol (14499.7601 without restraints) Performing minimization step: 130. Total energy = 14484.0543 kcal/mol (14469.7528 without restraints) Performing minimization step: 131. Total energy = 14454.2188 kcal/mol (14439.9403 without restraints) Performing minimization step: 132. Total energy = 14424.5743 kcal/mol (14410.3184 without restraints) Performing minimization step: 133. Total energy = 14395.1169 kcal/mol (14380.8831 without restraints) Performing minimization step: 134. Total energy = 14365.8427 kcal/mol (14351.6306 without restraints) Performing minimization step: 135. Total energy = 14336.7470 kcal/mol (14322.5561 without restraints) Performing minimization step: 136. Total energy = 14307.8275 kcal/mol (14293.6573 without restraints) Performing minimization step: 137. Total energy = 14279.0798 kcal/mol (14264.9300 without restraints) Performing minimization step: 138. Total energy = 14250.5005 kcal/mol (14236.3706 without restraints) Performing minimization step: 139. Total energy = 14222.0862 kcal/mol (14207.9758 without restraints) Performing minimization step: 140. Total energy = 14193.8336 kcal/mol (14179.7423 without restraints) Performing minimization step: 141. Total energy = 14165.7393 kcal/mol (14151.6669 without restraints) Performing minimization step: 142. Total energy = 14137.8003 kcal/mol (14123.7463 without restraints) Performing minimization step: 143. Total energy = 14110.0136 kcal/mol (14095.9776 without restraints) Performing minimization step: 144. Total energy = 14082.3759 kcal/mol (14068.3577 without restraints) Performing minimization step: 145. Total energy = 14054.8844 kcal/mol (14040.8836 without restraints) Performing minimization step: 146. Total energy = 14027.5371 kcal/mol (14013.5533 without restraints) Performing minimization step: 147. Total energy = 14000.3304 kcal/mol (13986.3634 without restraints) Performing minimization step: 148. Total energy = 13973.2619 kcal/mol (13959.3113 without restraints) Performing minimization step: 149. Total energy = 13946.3291 kcal/mol (13932.3946 without restraints) Performing minimization step: 150. Total energy = 13919.5293 kcal/mol (13905.6107 without restraints) Performing minimization step: 151. Total energy = 13892.8603 kcal/mol (13878.9572 without restraints) Performing minimization step: 152. Total energy = 13866.3194 kcal/mol (13852.4316 without restraints) Performing minimization step: 153. Total energy = 13839.9044 kcal/mol (13826.0317 without restraints) Performing minimization step: 154. Total energy = 13813.6134 kcal/mol (13799.7555 without restraints) Performing minimization step: 155. Total energy = 13787.4440 kcal/mol (13773.6006 without restraints) Performing minimization step: 156. Total energy = 13761.3941 kcal/mol (13747.5649 without restraints) Performing minimization step: 157. Total energy = 13735.4616 kcal/mol (13721.6464 without restraints) Performing minimization step: 158. Total energy = 13709.6444 kcal/mol (13695.8430 without restraints) Performing minimization step: 159. Total energy = 13683.9406 kcal/mol (13670.1528 without restraints) Performing minimization step: 160. Total energy = 13658.3484 kcal/mol (13644.5739 without restraints) Performing minimization step: 161. Total energy = 13632.8655 kcal/mol (13619.1042 without restraints) Performing minimization step: 162. Total energy = 13607.4908 kcal/mol (13593.7423 without restraints) Performing minimization step: 163. Total energy = 13582.2219 kcal/mol (13568.4861 without restraints) Performing minimization step: 164. Total energy = 13557.0575 kcal/mol (13543.3343 without restraints) Performing minimization step: 165. Total energy = 13531.9955 kcal/mol (13518.2844 without restraints) Performing minimization step: 166. Total energy = 13507.0349 kcal/mol (13493.3361 without restraints) Performing minimization step: 167. Total energy = 13482.1735 kcal/mol (13468.4867 without restraints) Performing minimization step: 168. Total energy = 13457.4101 kcal/mol (13443.7351 without restraints) Performing minimization step: 169. Total energy = 13432.7431 kcal/mol (13419.0797 without restraints) Performing minimization step: 170. Total energy = 13408.1710 kcal/mol (13394.5190 without restraints) Performing minimization step: 171. Total energy = 13383.6924 kcal/mol (13370.0516 without restraints) Performing minimization step: 172. Total energy = 13359.3058 kcal/mol (13345.6762 without restraints) Performing minimization step: 173. Total energy = 13335.0100 kcal/mol (13321.3913 without restraints) Performing minimization step: 174. Total energy = 13310.8035 kcal/mol (13297.1955 without restraints) Performing minimization step: 175. Total energy = 13286.6855 kcal/mol (13273.0881 without restraints) Performing minimization step: 176. Total energy = 13262.6538 kcal/mol (13249.0670 without restraints) Performing minimization step: 177. Total energy = 13238.7077 kcal/mol (13225.1312 without restraints) Performing minimization step: 178. Total energy = 13214.8459 kcal/mol (13201.2796 without restraints) Performing minimization step: 179. Total energy = 13191.0673 kcal/mol (13177.5110 without restraints) Performing minimization step: 180. Total energy = 13167.3706 kcal/mol (13153.8243 without restraints) Performing minimization step: 181. Total energy = 13143.7548 kcal/mol (13130.2183 without restraints) Performing minimization step: 182. Total energy = 13120.2187 kcal/mol (13106.6918 without restraints) Performing minimization step: 183. Total energy = 13096.7616 kcal/mol (13083.2443 without restraints) Performing minimization step: 184. Total energy = 13073.3819 kcal/mol (13059.8740 without restraints) Performing minimization step: 185. Total energy = 13050.0788 kcal/mol (13036.5802 without restraints) Performing minimization step: 186. Total energy = 13026.8517 kcal/mol (13013.3624 without restraints) Performing minimization step: 187. Total energy = 13003.6990 kcal/mol (12990.2187 without restraints) Performing minimization step: 188. Total energy = 12980.6196 kcal/mol (12967.1483 without restraints) Performing minimization step: 189. Total energy = 12957.6132 kcal/mol (12944.1507 without restraints) Performing minimization step: 190. Total energy = 12934.6786 kcal/mol (12921.2248 without restraints) Performing minimization step: 191. Total energy = 12911.8149 kcal/mol (12898.3698 without restraints) Performing minimization step: 192. Total energy = 12889.0213 kcal/mol (12875.5847 without restraints) Performing minimization step: 193. Total energy = 12866.2968 kcal/mol (12852.8687 without restraints) Performing minimization step: 194. Total energy = 12843.6407 kcal/mol (12830.2210 without restraints) Performing minimization step: 195. Total energy = 12821.0522 kcal/mol (12807.6407 without restraints) Performing minimization step: 196. Total energy = 12798.5305 kcal/mol (12785.1272 without restraints) Performing minimization step: 197. Total energy = 12776.0747 kcal/mol (12762.6794 without restraints) Performing minimization step: 198. Total energy = 12753.6840 kcal/mol (12740.2968 without restraints) Performing minimization step: 199. Total energy = 12731.3578 kcal/mol (12717.9784 without restraints) Performing minimization step: 200. Total energy = 12709.0953 kcal/mol (12695.7237 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/97a58f6c/tmp/complex_refx/complex_refx.pdb ...Done. Performing minimization step: 201. Total energy = 12686.8956 kcal/mol (12673.5316 without restraints) Performing minimization step: 202. Total energy = 12664.7581 kcal/mol (12651.4018 without restraints) Performing minimization step: 203. Total energy = 12642.6824 kcal/mol (12629.3338 without restraints) Performing minimization step: 204. Total energy = 12620.6676 kcal/mol (12607.3265 without restraints) Performing minimization step: 205. Total energy = 12598.7133 kcal/mol (12585.3796 without restraints) Performing minimization step: 206. Total energy = 12576.8184 kcal/mol (12563.4920 without restraints) Performing minimization step: 207. Total energy = 12554.9825 kcal/mol (12541.6634 without restraints) Performing minimization step: 208. Total energy = 12533.2047 kcal/mol (12519.8927 without restraints) Performing minimization step: 209. Total energy = 12511.4849 kcal/mol (12498.1800 without restraints) Performing minimization step: 210. Total energy = 12489.8222 kcal/mol (12476.5244 without restraints) Performing minimization step: 211. Total energy = 12468.2160 kcal/mol (12454.9252 without restraints) Performing minimization step: 212. Total energy = 12446.6661 kcal/mol (12433.3823 without restraints) Performing minimization step: 213. Total energy = 12425.1715 kcal/mol (12411.8944 without restraints) Performing minimization step: 214. Total energy = 12403.7316 kcal/mol (12390.4614 without restraints) Performing minimization step: 215. Total energy = 12382.3462 kcal/mol (12369.0827 without restraints) Performing minimization step: 216. Total energy = 12361.0145 kcal/mol (12347.7577 without restraints) Performing minimization step: 217. Total energy = 12339.7360 kcal/mol (12326.4857 without restraints) Performing minimization step: 218. Total energy = 12318.5106 kcal/mol (12305.2669 without restraints) Performing minimization step: 219. Total energy = 12297.3369 kcal/mol (12284.0997 without restraints) Performing minimization step: 220. Total energy = 12276.2154 kcal/mol (12262.9847 without restraints) Performing minimization step: 221. Total energy = 12255.1455 kcal/mol (12241.9212 without restraints) Performing minimization step: 222. Total energy = 12234.1263 kcal/mol (12220.9082 without restraints) Performing minimization step: 223. Total energy = 12213.1575 kcal/mol (12199.9459 without restraints) Performing minimization step: 224. Total energy = 12192.2387 kcal/mol (12179.0332 without restraints) Performing minimization step: 225. Total energy = 12171.3693 kcal/mol (12158.1699 without restraints) Performing minimization step: 226. Total energy = 12150.5489 kcal/mol (12137.3557 without restraints) Performing minimization step: 227. Total energy = 12129.7772 kcal/mol (12116.5900 without restraints) Performing minimization step: 228. Total energy = 12109.0538 kcal/mol (12095.8726 without restraints) Performing minimization step: 229. Total energy = 12088.3781 kcal/mol (12075.2029 without restraints) Performing minimization step: 230. Total energy = 12067.7498 kcal/mol (12054.5806 without restraints) Performing minimization step: 231. Total energy = 12047.1686 kcal/mol (12034.0053 without restraints) Performing minimization step: 232. Total energy = 12026.6342 kcal/mol (12013.4767 without restraints) Performing minimization step: 233. Total energy = 12006.1458 kcal/mol (11992.9941 without restraints) Performing minimization step: 234. Total energy = 11985.7031 kcal/mol (11972.5572 without restraints) Performing minimization step: 235. Total energy = 11965.3062 kcal/mol (11952.1660 without restraints) Performing minimization step: 236. Total energy = 11944.9542 kcal/mol (11931.8196 without restraints) Performing minimization step: 237. Total energy = 11924.6471 kcal/mol (11911.5182 without restraints) Performing minimization step: 238. Total energy = 11904.3845 kcal/mol (11891.2612 without restraints) Performing minimization step: 239. Total energy = 11884.1660 kcal/mol (11871.0482 without restraints) Performing minimization step: 240. Total energy = 11863.9915 kcal/mol (11850.8792 without restraints) Performing minimization step: 241. Total energy = 11843.8602 kcal/mol (11830.7533 without restraints) Performing minimization step: 242. Total energy = 11823.7719 kcal/mol (11810.6704 without restraints) Performing minimization step: 243. Total energy = 11803.7264 kcal/mol (11790.6304 without restraints) Performing minimization step: 244. Total energy = 11783.7235 kcal/mol (11770.6330 without restraints) Performing minimization step: 245. Total energy = 11763.7629 kcal/mol (11750.6776 without restraints) Performing minimization step: 246. Total energy = 11743.8441 kcal/mol (11730.7641 without restraints) Performing minimization step: 247. Total energy = 11723.9664 kcal/mol (11710.8916 without restraints) Performing minimization step: 248. Total energy = 11704.1304 kcal/mol (11691.0608 without restraints) Performing minimization step: 249. Total energy = 11684.3353 kcal/mol (11671.2710 without restraints) Performing minimization step: 250. Total energy = 11664.5811 kcal/mol (11651.5219 without restraints) Performing minimization step: 251. Total energy = 11644.8672 kcal/mol (11631.8132 without restraints) Performing minimization step: 252. Total energy = 11625.1935 kcal/mol (11612.1446 without restraints) Performing minimization step: 253. Total energy = 11605.5598 kcal/mol (11592.5159 without restraints) Performing minimization step: 254. Total energy = 11585.9656 kcal/mol (11572.9268 without restraints) Performing minimization step: 255. Total energy = 11566.4109 kcal/mol (11553.3770 without restraints) Performing minimization step: 256. Total energy = 11546.8953 kcal/mol (11533.8664 without restraints) Performing minimization step: 257. Total energy = 11527.4185 kcal/mol (11514.3946 without restraints) Performing minimization step: 258. Total energy = 11507.9800 kcal/mol (11494.9611 without restraints) Performing minimization step: 259. Total energy = 11488.5803 kcal/mol (11475.5662 without restraints) Performing minimization step: 260. Total energy = 11469.2187 kcal/mol (11456.2093 without restraints) Performing minimization step: 261. Total energy = 11449.8945 kcal/mol (11436.8901 without restraints) Performing minimization step: 262. Total energy = 11430.6085 kcal/mol (11417.6090 without restraints) Performing minimization step: 263. Total energy = 11411.3600 kcal/mol (11398.3653 without restraints) Performing minimization step: 264. Total energy = 11392.1488 kcal/mol (11379.1588 without restraints) Performing minimization step: 265. Total energy = 11372.9746 kcal/mol (11359.9893 without restraints) Performing minimization step: 266. Total energy = 11353.8372 kcal/mol (11340.8566 without restraints) Performing minimization step: 267. Total energy = 11334.7364 kcal/mol (11321.7605 without restraints) Performing minimization step: 268. Total energy = 11315.6716 kcal/mol (11302.7004 without restraints) Performing minimization step: 269. Total energy = 11296.6433 kcal/mol (11283.6768 without restraints) Performing minimization step: 270. Total energy = 11277.6511 kcal/mol (11264.6891 without restraints) Performing minimization step: 271. Total energy = 11258.6947 kcal/mol (11245.7373 without restraints) Performing minimization step: 272. Total energy = 11239.7738 kcal/mol (11226.8210 without restraints) Performing minimization step: 273. Total energy = 11220.8883 kcal/mol (11207.9401 without restraints) Performing minimization step: 274. Total energy = 11202.0381 kcal/mol (11189.0944 without restraints) Performing minimization step: 275. Total energy = 11183.2229 kcal/mol (11170.2837 without restraints) Performing minimization step: 276. Total energy = 11164.4425 kcal/mol (11151.5078 without restraints) Performing minimization step: 277. Total energy = 11145.6968 kcal/mol (11132.7666 without restraints) Performing minimization step: 278. Total energy = 11126.9857 kcal/mol (11114.0599 without restraints) Performing minimization step: 279. Total energy = 11108.3087 kcal/mol (11095.3874 without restraints) Performing minimization step: 280. Total energy = 11089.6660 kcal/mol (11076.7490 without restraints) Performing minimization step: 281. Total energy = 11071.0572 kcal/mol (11058.1446 without restraints) Performing minimization step: 282. Total energy = 11052.4822 kcal/mol (11039.5740 without restraints) Performing minimization step: 283. Total energy = 11033.9411 kcal/mol (11021.0372 without restraints) Performing minimization step: 284. Total energy = 11015.4332 kcal/mol (11002.5337 without restraints) Performing minimization step: 285. Total energy = 10996.9591 kcal/mol (10984.0639 without restraints) Performing minimization step: 286. Total energy = 10978.5179 kcal/mol (10965.6270 without restraints) Performing minimization step: 287. Total energy = 10960.1095 kcal/mol (10947.2229 without restraints) Performing minimization step: 288. Total energy = 10941.7343 kcal/mol (10928.8519 without restraints) Performing minimization step: 289. Total energy = 10923.3915 kcal/mol (10910.5134 without restraints) Performing minimization step: 290. Total energy = 10905.0815 kcal/mol (10892.2076 without restraints) Performing minimization step: 291. Total energy = 10886.8037 kcal/mol (10873.9340 without restraints) Performing minimization step: 292. Total energy = 10868.5582 kcal/mol (10855.6927 without restraints) Performing minimization step: 293. Total energy = 10850.3448 kcal/mol (10837.4835 without restraints) Performing minimization step: 294. Total energy = 10832.1634 kcal/mol (10819.3063 without restraints) Performing minimization step: 295. Total energy = 10814.0139 kcal/mol (10801.1610 without restraints) Performing minimization step: 296. Total energy = 10795.8961 kcal/mol (10783.0473 without restraints) Performing minimization step: 297. Total energy = 10777.8100 kcal/mol (10764.9652 without restraints) Performing minimization step: 298. Total energy = 10759.7552 kcal/mol (10746.9147 without restraints) Performing minimization step: 299. Total energy = 10741.7319 kcal/mol (10728.8954 without restraints) Performing minimization step: 300. Total energy = 10723.7398 kcal/mol (10710.9073 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/97a58f6c/tmp/complex_refx/complex_refx.pdb ...Done. Performing minimization step: 301. Total energy = 10705.7786 kcal/mol (10692.9503 without restraints) Performing minimization step: 302. Total energy = 10687.8484 kcal/mol (10675.0241 without restraints) Performing minimization step: 303. Total energy = 10669.9492 kcal/mol (10657.1289 without restraints) Performing minimization step: 304. Total energy = 10652.0808 kcal/mol (10639.2646 without restraints) Performing minimization step: 305. Total energy = 10634.2430 kcal/mol (10621.4308 without restraints) Performing minimization step: 306. Total energy = 10616.4357 kcal/mol (10603.6274 without restraints) Performing minimization step: 307. Total energy = 10598.6587 kcal/mol (10585.8544 without restraints) Performing minimization step: 308. Total energy = 10580.9119 kcal/mol (10568.1117 without restraints) Performing minimization step: 309. Total energy = 10563.1954 kcal/mol (10550.3991 without restraints) Performing minimization step: 310. Total energy = 10545.5089 kcal/mol (10532.7165 without restraints) Performing minimization step: 311. Total energy = 10527.8523 kcal/mol (10515.0639 without restraints) Performing minimization step: 312. Total energy = 10510.2256 kcal/mol (10497.4411 without restraints) Performing minimization step: 313. Total energy = 10492.6286 kcal/mol (10479.8480 without restraints) Performing minimization step: 314. Total energy = 10475.0613 kcal/mol (10462.2846 without restraints) Performing minimization step: 315. Total energy = 10457.5234 kcal/mol (10444.7508 without restraints) Performing minimization step: 316. Total energy = 10440.0151 kcal/mol (10427.2461 without restraints) Performing minimization step: 317. Total energy = 10422.5358 kcal/mol (10409.7707 without restraints) Performing minimization step: 318. Total energy = 10405.0860 kcal/mol (10392.3248 without restraints) Performing minimization step: 319. Total energy = 10387.6654 kcal/mol (10374.9080 without restraints) Performing minimization step: 320. Total energy = 10370.2738 kcal/mol (10357.5203 without restraints) Performing minimization step: 321. Total energy = 10352.9109 kcal/mol (10340.1610 without restraints) Performing minimization step: 322. Total energy = 10335.5770 kcal/mol (10322.8311 without restraints) Performing minimization step: 323. Total energy = 10318.2721 kcal/mol (10305.5300 without restraints) Performing minimization step: 324. Total energy = 10300.9956 kcal/mol (10288.2573 without restraints) Performing minimization step: 325. Total energy = 10283.7480 kcal/mol (10271.0135 without restraints) Performing minimization step: 326. Total energy = 10266.5289 kcal/mol (10253.7982 without restraints) Performing minimization step: 327. Total energy = 10249.3382 kcal/mol (10236.6113 without restraints) Performing minimization step: 328. Total energy = 10232.1759 kcal/mol (10219.4527 without restraints) Performing minimization step: 329. Total energy = 10215.0420 kcal/mol (10202.3226 without restraints) Performing minimization step: 330. Total energy = 10197.9362 kcal/mol (10185.2205 without restraints) Performing minimization step: 331. Total energy = 10180.8583 kcal/mol (10168.1463 without restraints) Performing minimization step: 332. Total energy = 10163.8085 kcal/mol (10151.1001 without restraints) Performing minimization step: 333. Total energy = 10146.7866 kcal/mol (10134.0821 without restraints) Performing minimization step: 334. Total energy = 10129.7923 kcal/mol (10117.0914 without restraints) Performing minimization step: 335. Total energy = 10112.8262 kcal/mol (10100.1291 without restraints) Performing minimization step: 336. Total energy = 10095.8882 kcal/mol (10083.1948 without restraints) Performing minimization step: 337. Total energy = 10078.9776 kcal/mol (10066.2878 without restraints) Performing minimization step: 338. Total energy = 10062.0945 kcal/mol (10049.4084 without restraints) Performing minimization step: 339. Total energy = 10045.2390 kcal/mol (10032.5566 without restraints) Performing minimization step: 340. Total energy = 10028.4109 kcal/mol (10015.7321 without restraints) Performing minimization step: 341. Total energy = 10011.6102 kcal/mol (9998.9351 without restraints) Performing minimization step: 342. Total energy = 9994.8369 kcal/mol (9982.1654 without restraints) Performing minimization step: 343. Total energy = 9978.0905 kcal/mol (9965.4226 without restraints) Performing minimization step: 344. Total energy = 9961.3716 kcal/mol (9948.7073 without restraints) Performing minimization step: 345. Total energy = 9944.6797 kcal/mol (9932.0191 without restraints) Performing minimization step: 346. Total energy = 9928.0149 kcal/mol (9915.3581 without restraints) Performing minimization step: 347. Total energy = 9911.3774 kcal/mol (9898.7241 without restraints) Performing minimization step: 348. Total energy = 9894.7666 kcal/mol (9882.1168 without restraints) Performing minimization step: 349. Total energy = 9878.1827 kcal/mol (9865.5365 without restraints) Performing minimization step: 350. Total energy = 9861.6255 kcal/mol (9848.9829 without restraints) Performing minimization step: 351. Total energy = 9845.0951 kcal/mol (9832.4561 without restraints) Performing minimization step: 352. Total energy = 9828.5917 kcal/mol (9815.9563 without restraints) Performing minimization step: 353. Total energy = 9812.1146 kcal/mol (9799.4828 without restraints) Performing minimization step: 354. Total energy = 9795.6642 kcal/mol (9783.0359 without restraints) Performing minimization step: 355. Total energy = 9779.2403 kcal/mol (9766.6155 without restraints) Performing minimization step: 356. Total energy = 9762.8428 kcal/mol (9750.2217 without restraints) Performing minimization step: 357. Total energy = 9746.4719 kcal/mol (9733.8544 without restraints) Performing minimization step: 358. Total energy = 9730.1274 kcal/mol (9717.5133 without restraints) Performing minimization step: 359. Total energy = 9713.8093 kcal/mol (9701.1988 without restraints) Performing minimization step: 360. Total energy = 9697.5174 kcal/mol (9684.9105 without restraints) Performing minimization step: 361. Total energy = 9681.2517 kcal/mol (9668.6482 without restraints) Performing minimization step: 362. Total energy = 9665.0121 kcal/mol (9652.4121 without restraints) Performing minimization step: 363. Total energy = 9648.7986 kcal/mol (9636.2021 without restraints) Performing minimization step: 364. Total energy = 9632.6111 kcal/mol (9620.0182 without restraints) Performing minimization step: 365. Total energy = 9616.4497 kcal/mol (9603.8603 without restraints) Performing minimization step: 366. Total energy = 9600.3144 kcal/mol (9587.7285 without restraints) Performing minimization step: 367. Total energy = 9584.2050 kcal/mol (9571.6226 without restraints) Performing minimization step: 368. Total energy = 9568.1215 kcal/mol (9555.5425 without restraints) Performing minimization step: 369. Total energy = 9552.0637 kcal/mol (9539.4883 without restraints) Performing minimization step: 370. Total energy = 9536.0318 kcal/mol (9523.4599 without restraints) Performing minimization step: 371. Total energy = 9520.0257 kcal/mol (9507.4572 without restraints) Performing minimization step: 372. Total energy = 9504.0453 kcal/mol (9491.4803 without restraints) Performing minimization step: 373. Total energy = 9488.0906 kcal/mol (9475.5290 without restraints) Performing minimization step: 374. Total energy = 9472.1617 kcal/mol (9459.6036 without restraints) Performing minimization step: 375. Total energy = 9456.2582 kcal/mol (9443.7036 without restraints) Performing minimization step: 376. Total energy = 9440.3803 kcal/mol (9427.8292 without restraints) Performing minimization step: 377. Total energy = 9424.5280 kcal/mol (9411.9803 without restraints) Performing minimization step: 378. Total energy = 9408.7011 kcal/mol (9396.1567 without restraints) Performing minimization step: 379. Total energy = 9392.8994 kcal/mol (9380.3586 without restraints) Performing minimization step: 380. Total energy = 9377.1240 kcal/mol (9364.5867 without restraints) Performing minimization step: 381. Total energy = 9361.3735 kcal/mol (9348.8396 without restraints) Performing minimization step: 382. Total energy = 9345.6483 kcal/mol (9333.1178 without restraints) Performing minimization step: 383. Total energy = 9329.9484 kcal/mol (9317.4214 without restraints) Performing minimization step: 384. Total energy = 9314.2738 kcal/mol (9301.7502 without restraints) Performing minimization step: 385. Total energy = 9298.6245 kcal/mol (9286.1043 without restraints) Performing minimization step: 386. Total energy = 9283.0004 kcal/mol (9270.4836 without restraints) Performing minimization step: 387. Total energy = 9267.4015 kcal/mol (9254.8881 without restraints) Performing minimization step: 388. Total energy = 9251.8277 kcal/mol (9239.3178 without restraints) Performing minimization step: 389. Total energy = 9236.2791 kcal/mol (9223.7724 without restraints) Performing minimization step: 390. Total energy = 9220.7555 kcal/mol (9208.2524 without restraints) Performing minimization step: 391. Total energy = 9205.2571 kcal/mol (9192.7574 without restraints) Performing minimization step: 392. Total energy = 9189.7838 kcal/mol (9177.2875 without restraints) Performing minimization step: 393. Total energy = 9174.3355 kcal/mol (9161.8426 without restraints) Performing minimization step: 394. Total energy = 9158.9121 kcal/mol (9146.4227 without restraints) Performing minimization step: 395. Total energy = 9143.5138 kcal/mol (9131.0277 without restraints) Performing minimization step: 396. Total energy = 9128.1405 kcal/mol (9115.6580 without restraints) Performing minimization step: 397. Total energy = 9112.7922 kcal/mol (9100.3129 without restraints) Performing minimization step: 398. Total energy = 9097.4686 kcal/mol (9084.9927 without restraints) Performing minimization step: 399. Total energy = 9082.1700 kcal/mol (9069.6974 without restraints) Performing minimization step: 400. Total energy = 9066.8961 kcal/mol (9054.4270 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/97a58f6c/tmp/complex_refx/complex_refx.pdb ...Done. Performing minimization step: 401. Total energy = 9051.6472 kcal/mol (9039.1815 without restraints) Performing minimization step: 402. Total energy = 9036.4231 kcal/mol (9023.9607 without restraints) Performing minimization step: 403. Total energy = 9021.2236 kcal/mol (9008.7645 without restraints) Performing minimization step: 404. Total energy = 9006.0489 kcal/mol (8993.5933 without restraints) Performing minimization step: 405. Total energy = 8990.8990 kcal/mol (8978.4468 without restraints) Performing minimization step: 406. Total energy = 8975.7739 kcal/mol (8963.3251 without restraints) Performing minimization step: 407. Total energy = 8960.6735 kcal/mol (8948.2281 without restraints) Performing minimization step: 408. Total energy = 8945.5978 kcal/mol (8933.1557 without restraints) Performing minimization step: 409. Total energy = 8930.5468 kcal/mol (8918.1081 without restraints) Performing minimization step: 410. Total energy = 8915.5206 kcal/mol (8903.0851 without restraints) Performing minimization step: 411. Total energy = 8900.5188 kcal/mol (8888.0868 without restraints) Performing minimization step: 412. Total energy = 8885.5418 kcal/mol (8873.1134 without restraints) Performing minimization step: 413. Total energy = 8870.5895 kcal/mol (8858.1643 without restraints) Performing minimization step: 414. Total energy = 8855.6617 kcal/mol (8843.2400 without restraints) Performing minimization step: 415. Total energy = 8840.7586 kcal/mol (8828.3401 without restraints) Performing minimization step: 416. Total energy = 8825.8799 kcal/mol (8813.4648 without restraints) Performing minimization step: 417. Total energy = 8811.0256 kcal/mol (8798.6138 without restraints) Performing minimization step: 418. Total energy = 8796.1958 kcal/mol (8783.7874 without restraints) Performing minimization step: 419. Total energy = 8781.3907 kcal/mol (8768.9856 without restraints) Performing minimization step: 420. Total energy = 8766.6097 kcal/mol (8754.2079 without restraints) Performing minimization step: 421. Total energy = 8751.8534 kcal/mol (8739.4551 without restraints) Performing minimization step: 422. Total energy = 8737.1219 kcal/mol (8724.7270 without restraints) Performing minimization step: 423. Total energy = 8722.4150 kcal/mol (8710.0234 without restraints) Performing minimization step: 424. Total energy = 8707.7324 kcal/mol (8695.3442 without restraints) Performing minimization step: 425. Total energy = 8693.0744 kcal/mol (8680.6895 without restraints) Performing minimization step: 426. Total energy = 8678.4410 kcal/mol (8666.0595 without restraints) Performing minimization step: 427. Total energy = 8663.8319 kcal/mol (8651.4538 without restraints) Performing minimization step: 428. Total energy = 8649.2473 kcal/mol (8636.8725 without restraints) Performing minimization step: 429. Total energy = 8634.6871 kcal/mol (8622.3156 without restraints) Performing minimization step: 430. Total energy = 8620.1512 kcal/mol (8607.7831 without restraints) Performing minimization step: 431. Total energy = 8605.6398 kcal/mol (8593.2751 without restraints) Performing minimization step: 432. Total energy = 8591.1529 kcal/mol (8578.7916 without restraints) Performing minimization step: 433. Total energy = 8576.6905 kcal/mol (8564.3325 without restraints) Performing minimization step: 434. Total energy = 8562.2524 kcal/mol (8549.8978 without restraints) Performing minimization step: 435. Total energy = 8547.8390 kcal/mol (8535.4877 without restraints) Performing minimization step: 436. Total energy = 8533.4498 kcal/mol (8521.1018 without restraints) Performing minimization step: 437. Total energy = 8519.0850 kcal/mol (8506.7404 without restraints) Performing minimization step: 438. Total energy = 8504.7445 kcal/mol (8492.4033 without restraints) Performing minimization step: 439. Total energy = 8490.4285 kcal/mol (8478.0907 without restraints) Performing minimization step: 440. Total energy = 8476.1369 kcal/mol (8463.8024 without restraints) Performing minimization step: 441. Total energy = 8461.8697 kcal/mol (8449.5386 without restraints) Performing minimization step: 442. Total energy = 8447.6269 kcal/mol (8435.2992 without restraints) Performing minimization step: 443. Total energy = 8433.4085 kcal/mol (8421.0841 without restraints) Performing minimization step: 444. Total energy = 8419.2145 kcal/mol (8406.8935 without restraints) Performing minimization step: 445. Total energy = 8405.0449 kcal/mol (8392.7272 without restraints) Performing minimization step: 446. Total energy = 8390.8997 kcal/mol (8378.5854 without restraints) Performing minimization step: 447. Total energy = 8376.7789 kcal/mol (8364.4679 without restraints) Performing minimization step: 448. Total energy = 8362.6824 kcal/mol (8350.3749 without restraints) Performing minimization step: 449. Total energy = 8348.6102 kcal/mol (8336.3060 without restraints) Performing minimization step: 450. Total energy = 8334.5626 kcal/mol (8322.2618 without restraints) Performing minimization step: 451. Total energy = 8320.5394 kcal/mol (8308.2420 without restraints) Performing minimization step: 452. Total energy = 8306.5403 kcal/mol (8294.2462 without restraints) Performing minimization step: 453. Total energy = 8292.5657 kcal/mol (8280.2750 without restraints) Performing minimization step: 454. Total energy = 8278.6158 kcal/mol (8266.3284 without restraints) Performing minimization step: 455. Total energy = 8264.6903 kcal/mol (8252.4063 without restraints) Performing minimization step: 456. Total energy = 8250.7892 kcal/mol (8238.5085 without restraints) Performing minimization step: 457. Total energy = 8236.9125 kcal/mol (8224.6352 without restraints) Performing minimization step: 458. Total energy = 8223.0602 kcal/mol (8210.7864 without restraints) Performing minimization step: 459. Total energy = 8209.2324 kcal/mol (8196.9619 without restraints) Performing minimization step: 460. Total energy = 8195.4290 kcal/mol (8183.1620 without restraints) Performing minimization step: 461. Total energy = 8181.6502 kcal/mol (8169.3864 without restraints) Performing minimization step: 462. Total energy = 8167.8957 kcal/mol (8155.6354 without restraints) Performing minimization step: 463. Total energy = 8154.1657 kcal/mol (8141.9088 without restraints) Performing minimization step: 464. Total energy = 8140.4604 kcal/mol (8128.2068 without restraints) Performing minimization step: 465. Total energy = 8126.7794 kcal/mol (8114.5292 without restraints) Performing minimization step: 466. Total energy = 8113.1228 kcal/mol (8100.8761 without restraints) Performing minimization step: 467. Total energy = 8099.4908 kcal/mol (8087.2474 without restraints) Performing minimization step: 468. Total energy = 8085.8833 kcal/mol (8073.6433 without restraints) Performing minimization step: 469. Total energy = 8072.3001 kcal/mol (8060.0635 without restraints) Performing minimization step: 470. Total energy = 8058.7416 kcal/mol (8046.5083 without restraints) Performing minimization step: 471. Total energy = 8045.2076 kcal/mol (8032.9778 without restraints) Performing minimization step: 472. Total energy = 8031.6983 kcal/mol (8019.4719 without restraints) Performing minimization step: 473. Total energy = 8018.2134 kcal/mol (8005.9904 without restraints) Performing minimization step: 474. Total energy = 8004.7530 kcal/mol (7992.5334 without restraints) Performing minimization step: 475. Total energy = 7991.3172 kcal/mol (7979.1010 without restraints) Performing minimization step: 476. Total energy = 7977.9060 kcal/mol (7965.6932 without restraints) Performing minimization step: 477. Total energy = 7964.5193 kcal/mol (7952.3100 without restraints) Performing minimization step: 478. Total energy = 7951.1573 kcal/mol (7938.9513 without restraints) Performing minimization step: 479. Total energy = 7937.8198 kcal/mol (7925.6172 without restraints) Performing minimization step: 480. Total energy = 7924.5069 kcal/mol (7912.3078 without restraints) Performing minimization step: 481. Total energy = 7911.2185 kcal/mol (7899.0226 without restraints) Performing minimization step: 482. Total energy = 7897.9547 kcal/mol (7885.7623 without restraints) Performing minimization step: 483. Total energy = 7884.7157 kcal/mol (7872.5268 without restraints) Performing minimization step: 484. Total energy = 7871.5014 kcal/mol (7859.3159 without restraints) Performing minimization step: 485. Total energy = 7858.3117 kcal/mol (7846.1297 without restraints) Performing minimization step: 486. Total energy = 7845.1465 kcal/mol (7832.9678 without restraints) Performing minimization step: 487. Total energy = 7832.0061 kcal/mol (7819.8308 without restraints) Performing minimization step: 488. Total energy = 7818.8903 kcal/mol (7806.7185 without restraints) Performing minimization step: 489. Total energy = 7805.7991 kcal/mol (7793.6308 without restraints) Performing minimization step: 490. Total energy = 7792.7329 kcal/mol (7780.5680 without restraints) Performing minimization step: 491. Total energy = 7779.6913 kcal/mol (7767.5298 without restraints) Performing minimization step: 492. Total energy = 7766.6744 kcal/mol (7754.5164 without restraints) Performing minimization step: 493. Total energy = 7753.6823 kcal/mol (7741.5277 without restraints) Performing minimization step: 494. Total energy = 7740.7149 kcal/mol (7728.5638 without restraints) Performing minimization step: 495. Total energy = 7727.7722 kcal/mol (7715.6245 without restraints) Performing minimization step: 496. Total energy = 7714.8543 kcal/mol (7702.7100 without restraints) Performing minimization step: 497. Total energy = 7701.9612 kcal/mol (7689.8204 without restraints) Performing minimization step: 498. Total energy = 7689.0928 kcal/mol (7676.9555 without restraints) Performing minimization step: 499. Total energy = 7676.2493 kcal/mol (7664.1153 without restraints) Performing minimization step: 500. Total energy = 7663.4305 kcal/mol (7651.3000 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/97a58f6c/tmp/complex_refx/complex_refx.pdb ...Done. Performing minimization step: 501. Total energy = 7650.6364 kcal/mol (7638.5094 without restraints) Performing minimization step: 502. Total energy = 7637.8672 kcal/mol (7625.7437 without restraints) Performing minimization step: 503. Total energy = 7625.1228 kcal/mol (7613.0027 without restraints) Performing minimization step: 504. Total energy = 7612.4033 kcal/mol (7600.2866 without restraints) Performing minimization step: 505. Total energy = 7599.7085 kcal/mol (7587.5953 without restraints) Performing minimization step: 506. Total energy = 7587.0384 kcal/mol (7574.9287 without restraints) Performing minimization step: 507. Total energy = 7574.3935 kcal/mol (7562.2872 without restraints) Performing minimization step: 508. Total energy = 7561.7733 kcal/mol (7549.6705 without restraints) Performing minimization step: 509. Total energy = 7549.1779 kcal/mol (7537.0785 without restraints) Performing minimization step: 510. Total energy = 7536.6073 kcal/mol (7524.5114 without restraints) Performing minimization step: 511. Total energy = 7524.0615 kcal/mol (7511.9691 without restraints) Performing minimization step: 512. Total energy = 7511.5406 kcal/mol (7499.4517 without restraints) Performing minimization step: 513. Total energy = 7499.0443 kcal/mol (7486.9589 without restraints) Performing minimization step: 514. Total energy = 7486.5727 kcal/mol (7474.4907 without restraints) Performing minimization step: 515. Total energy = 7474.1264 kcal/mol (7462.0478 without restraints) Performing minimization step: 516. Total energy = 7461.7048 kcal/mol (7449.6298 without restraints) Performing minimization step: 517. Total energy = 7449.3082 kcal/mol (7437.2366 without restraints) Performing minimization step: 518. Total energy = 7436.9364 kcal/mol (7424.8683 without restraints) Performing minimization step: 519. Total energy = 7424.5894 kcal/mol (7412.5248 without restraints) Performing minimization step: 520. Total energy = 7412.2673 kcal/mol (7400.2062 without restraints) Performing minimization step: 521. Total energy = 7399.9701 kcal/mol (7387.9124 without restraints) Performing minimization step: 522. Total energy = 7387.6976 kcal/mol (7375.6434 without restraints) Performing minimization step: 523. Total energy = 7375.4500 kcal/mol (7363.3993 without restraints) Performing minimization step: 524. Total energy = 7363.2275 kcal/mol (7351.1802 without restraints) Performing minimization step: 525. Total energy = 7351.0295 kcal/mol (7338.9858 without restraints) Performing minimization step: 526. Total energy = 7338.8564 kcal/mol (7326.8161 without restraints) Performing minimization step: 527. Total energy = 7326.7080 kcal/mol (7314.6712 without restraints) Performing minimization step: 528. Total energy = 7314.5845 kcal/mol (7302.5512 without restraints) Performing minimization step: 529. Total energy = 7302.4855 kcal/mol (7290.4557 without restraints) Performing minimization step: 530. Total energy = 7290.4115 kcal/mol (7278.3851 without restraints) Performing minimization step: 531. Total energy = 7278.3625 kcal/mol (7266.3396 without restraints) Performing minimization step: 532. Total energy = 7266.3384 kcal/mol (7254.3189 without restraints) Performing minimization step: 533. Total energy = 7254.3386 kcal/mol (7242.3226 without restraints) Performing minimization step: 534. Total energy = 7242.3635 kcal/mol (7230.3511 without restraints) Performing minimization step: 535. Total energy = 7230.4130 kcal/mol (7218.4038 without restraints) Performing minimization step: 536. Total energy = 7218.4871 kcal/mol (7206.4816 without restraints) Performing minimization step: 537. Total energy = 7206.5861 kcal/mol (7194.5841 without restraints) Performing minimization step: 538. Total energy = 7194.7098 kcal/mol (7182.7112 without restraints) Performing minimization step: 539. Total energy = 7182.8581 kcal/mol (7170.8630 without restraints) Performing minimization step: 540. Total energy = 7171.0310 kcal/mol (7159.0393 without restraints) Performing minimization step: 541. Total energy = 7159.2285 kcal/mol (7147.2403 without restraints) Performing minimization step: 542. Total energy = 7147.4505 kcal/mol (7135.4658 without restraints) Performing minimization step: 543. Total energy = 7135.6971 kcal/mol (7123.7159 without restraints) Performing minimization step: 544. Total energy = 7123.9683 kcal/mol (7111.9905 without restraints) Performing minimization step: 545. Total energy = 7112.2640 kcal/mol (7100.2897 without restraints) Performing minimization step: 546. Total energy = 7100.5842 kcal/mol (7088.6133 without restraints) Performing minimization step: 547. Total energy = 7088.9287 kcal/mol (7076.9612 without restraints) Performing minimization step: 548. Total energy = 7077.2974 kcal/mol (7065.3334 without restraints) Performing minimization step: 549. Total energy = 7065.6908 kcal/mol (7053.7302 without restraints) Performing minimization step: 550. Total energy = 7054.1083 kcal/mol (7042.1511 without restraints) Performing minimization step: 551. Total energy = 7042.5500 kcal/mol (7030.5963 without restraints) Performing minimization step: 552. Total energy = 7031.0160 kcal/mol (7019.0657 without restraints) Performing minimization step: 553. Total energy = 7019.5062 kcal/mol (7007.5593 without restraints) Performing minimization step: 554. Total energy = 7008.0206 kcal/mol (6996.0771 without restraints) Performing minimization step: 555. Total energy = 6996.5590 kcal/mol (6984.6190 without restraints) Performing minimization step: 556. Total energy = 6985.1216 kcal/mol (6973.1850 without restraints) Performing minimization step: 557. Total energy = 6973.7082 kcal/mol (6961.7750 without restraints) Performing minimization step: 558. Total energy = 6962.3188 kcal/mol (6950.3890 without restraints) Performing minimization step: 559. Total energy = 6950.9533 kcal/mol (6939.0269 without restraints) Performing minimization step: 560. Total energy = 6939.6118 kcal/mol (6927.6888 without restraints) Performing minimization step: 561. Total energy = 6928.2940 kcal/mol (6916.3745 without restraints) Performing minimization step: 562. Total energy = 6917.0001 kcal/mol (6905.0840 without restraints) Performing minimization step: 563. Total energy = 6905.7299 kcal/mol (6893.8172 without restraints) Performing minimization step: 564. Total energy = 6894.4835 kcal/mol (6882.5741 without restraints) Performing minimization step: 565. Total energy = 6883.2607 kcal/mol (6871.3547 without restraints) Performing minimization step: 566. Total energy = 6872.0615 kcal/mol (6860.1588 without restraints) Performing minimization step: 567. Total energy = 6860.8858 kcal/mol (6848.9865 without restraints) Performing minimization step: 568. Total energy = 6849.7335 kcal/mol (6837.8376 without restraints) Performing minimization step: 569. Total energy = 6838.6047 kcal/mol (6826.7121 without restraints) Performing minimization step: 570. Total energy = 6827.4995 kcal/mol (6815.6102 without restraints) Performing minimization step: 571. Total energy = 6816.4175 kcal/mol (6804.5315 without restraints) Performing minimization step: 572. Total energy = 6805.3585 kcal/mol (6793.4759 without restraints) Performing minimization step: 573. Total energy = 6794.3227 kcal/mol (6782.4435 without restraints) Performing minimization step: 574. Total energy = 6783.3100 kcal/mol (6771.4341 without restraints) Performing minimization step: 575. Total energy = 6772.3204 kcal/mol (6760.4478 without restraints) Performing minimization step: 576. Total energy = 6761.3540 kcal/mol (6749.4846 without restraints) Performing minimization step: 577. Total energy = 6750.4102 kcal/mol (6738.5441 without restraints) Performing minimization step: 578. Total energy = 6739.4892 kcal/mol (6727.6265 without restraints) Performing minimization step: 579. Total energy = 6728.5910 kcal/mol (6716.7316 without restraints) Performing minimization step: 580. Total energy = 6717.7157 kcal/mol (6705.8595 without restraints) Performing minimization step: 581. Total energy = 6706.8628 kcal/mol (6695.0099 without restraints) Performing minimization step: 582. Total energy = 6696.0324 kcal/mol (6684.1828 without restraints) Performing minimization step: 583. Total energy = 6685.2245 kcal/mol (6673.3781 without restraints) Performing minimization step: 584. Total energy = 6674.4389 kcal/mol (6662.5958 without restraints) Performing minimization step: 585. Total energy = 6663.6757 kcal/mol (6651.8358 without restraints) Performing minimization step: 586. Total energy = 6652.9345 kcal/mol (6641.0978 without restraints) Performing minimization step: 587. Total energy = 6642.2159 kcal/mol (6630.3825 without restraints) Performing minimization step: 588. Total energy = 6631.5192 kcal/mol (6619.6889 without restraints) Performing minimization step: 589. Total energy = 6620.8444 kcal/mol (6609.0174 without restraints) Performing minimization step: 590. Total energy = 6610.1916 kcal/mol (6598.3678 without restraints) Performing minimization step: 591. Total energy = 6599.5605 kcal/mol (6587.7398 without restraints) Performing minimization step: 592. Total energy = 6588.9512 kcal/mol (6577.1337 without restraints) Performing minimization step: 593. Total energy = 6578.3636 kcal/mol (6566.5493 without restraints) Performing minimization step: 594. Total energy = 6567.7976 kcal/mol (6555.9865 without restraints) Performing minimization step: 595. Total energy = 6557.2532 kcal/mol (6545.4452 without restraints) Performing minimization step: 596. Total energy = 6546.7302 kcal/mol (6534.9253 without restraints) Performing minimization step: 597. Total energy = 6536.2286 kcal/mol (6524.4270 without restraints) Performing minimization step: 598. Total energy = 6525.7482 kcal/mol (6513.9496 without restraints) Performing minimization step: 599. Total energy = 6515.2890 kcal/mol (6503.4935 without restraints) Performing minimization step: 600. Total energy = 6504.8508 kcal/mol (6493.0585 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/97a58f6c/tmp/complex_refx/complex_refx.pdb ...Done. Performing minimization step: 601. Total energy = 6494.4337 kcal/mol (6482.6444 without restraints) Performing minimization step: 602. Total energy = 6484.0374 kcal/mol (6472.2513 without restraints) Performing minimization step: 603. Total energy = 6473.6620 kcal/mol (6461.8790 without restraints) Performing minimization step: 604. Total energy = 6463.3075 kcal/mol (6451.5275 without restraints) Performing minimization step: 605. Total energy = 6452.9735 kcal/mol (6441.1965 without restraints) Performing minimization step: 606. Total energy = 6442.6602 kcal/mol (6430.8863 without restraints) Performing minimization step: 607. Total energy = 6432.3673 kcal/mol (6420.5965 without restraints) Performing minimization step: 608. Total energy = 6422.0950 kcal/mol (6410.3274 without restraints) Performing minimization step: 609. Total energy = 6411.8430 kcal/mol (6400.0782 without restraints) Performing minimization step: 610. Total energy = 6401.6113 kcal/mol (6389.8496 without restraints) Performing minimization step: 611. Total energy = 6391.3996 kcal/mol (6379.6409 without restraints) Performing minimization step: 612. Total energy = 6381.2080 kcal/mol (6369.4522 without restraints) Performing minimization step: 613. Total energy = 6371.0364 kcal/mol (6359.2838 without restraints) Performing minimization step: 614. Total energy = 6360.8848 kcal/mol (6349.1351 without restraints) Performing minimization step: 615. Total energy = 6350.7529 kcal/mol (6339.0061 without restraints) Performing minimization step: 616. Total energy = 6340.6407 kcal/mol (6328.8969 without restraints) Performing minimization step: 617. Total energy = 6330.5484 kcal/mol (6318.8075 without restraints) Performing minimization step: 618. Total energy = 6320.4755 kcal/mol (6308.7376 without restraints) Performing minimization step: 619. Total energy = 6310.4218 kcal/mol (6298.6868 without restraints) Performing minimization step: 620. Total energy = 6300.3880 kcal/mol (6288.6560 without restraints) Performing minimization step: 621. Total energy = 6290.3730 kcal/mol (6278.6439 without restraints) Performing minimization step: 622. Total energy = 6280.3774 kcal/mol (6268.6512 without restraints) Performing minimization step: 623. Total energy = 6270.4011 kcal/mol (6258.6778 without restraints) Performing minimization step: 624. Total energy = 6260.4439 kcal/mol (6248.7235 without restraints) Performing minimization step: 625. Total energy = 6250.5058 kcal/mol (6238.7883 without restraints) Performing minimization step: 626. Total energy = 6240.5866 kcal/mol (6228.8719 without restraints) Performing minimization step: 627. Total energy = 6230.6862 kcal/mol (6218.9745 without restraints) Performing minimization step: 628. Total energy = 6220.8046 kcal/mol (6209.0958 without restraints) Performing minimization step: 629. Total energy = 6210.9418 kcal/mol (6199.2358 without restraints) Performing minimization step: 630. Total energy = 6201.0976 kcal/mol (6189.3944 without restraints) Performing minimization step: 631. Total energy = 6191.2719 kcal/mol (6179.5716 without restraints) Performing minimization step: 632. Total energy = 6181.4648 kcal/mol (6169.7673 without restraints) Performing minimization step: 633. Total energy = 6171.6758 kcal/mol (6159.9811 without restraints) Performing minimization step: 634. Total energy = 6161.9054 kcal/mol (6150.2135 without restraints) Performing minimization step: 635. Total energy = 6152.1532 kcal/mol (6140.4642 without restraints) Performing minimization step: 636. Total energy = 6142.4195 kcal/mol (6130.7333 without restraints) Performing minimization step: 637. Total energy = 6132.7038 kcal/mol (6121.0203 without restraints) Performing minimization step: 638. Total energy = 6123.0060 kcal/mol (6111.3253 without restraints) Performing minimization step: 639. Total energy = 6113.3263 kcal/mol (6101.6485 without restraints) Performing minimization step: 640. Total energy = 6103.6645 kcal/mol (6091.9895 without restraints) Performing minimization step: 641. Total energy = 6094.0202 kcal/mol (6082.3479 without restraints) Performing minimization step: 642. Total energy = 6084.3941 kcal/mol (6072.7246 without restraints) Performing minimization step: 643. Total energy = 6074.7858 kcal/mol (6063.1190 without restraints) Performing minimization step: 644. Total energy = 6065.1951 kcal/mol (6053.5311 without restraints) Performing minimization step: 645. Total energy = 6055.6223 kcal/mol (6043.9610 without restraints) Performing minimization step: 646. Total energy = 6046.0668 kcal/mol (6034.4083 without restraints) Performing minimization step: 647. Total energy = 6036.5288 kcal/mol (6024.8730 without restraints) Performing minimization step: 648. Total energy = 6027.0082 kcal/mol (6015.3552 without restraints) Performing minimization step: 649. Total energy = 6017.5049 kcal/mol (6005.8544 without restraints) Performing minimization step: 650. Total energy = 6008.0187 kcal/mol (5996.3711 without restraints) Performing minimization step: 651. Total energy = 5998.5501 kcal/mol (5986.9052 without restraints) Performing minimization step: 652. Total energy = 5989.0988 kcal/mol (5977.4566 without restraints) Performing minimization step: 653. Total energy = 5979.6650 kcal/mol (5968.0255 without restraints) Performing minimization step: 654. Total energy = 5970.2479 kcal/mol (5958.6111 without restraints) Performing minimization step: 655. Total energy = 5960.8479 kcal/mol (5949.2137 without restraints) Performing minimization step: 656. Total energy = 5951.4648 kcal/mol (5939.8334 without restraints) Performing minimization step: 657. Total energy = 5942.0988 kcal/mol (5930.4700 without restraints) Performing minimization step: 658. Total energy = 5932.7496 kcal/mol (5921.1235 without restraints) Performing minimization step: 659. Total energy = 5923.4175 kcal/mol (5911.7942 without restraints) Performing minimization step: 660. Total energy = 5914.1021 kcal/mol (5902.4814 without restraints) Performing minimization step: 661. Total energy = 5904.8035 kcal/mol (5893.1856 without restraints) Performing minimization step: 662. Total energy = 5895.5216 kcal/mol (5883.9062 without restraints) Performing minimization step: 663. Total energy = 5886.2565 kcal/mol (5874.6437 without restraints) Performing minimization step: 664. Total energy = 5877.0078 kcal/mol (5865.3977 without restraints) Performing minimization step: 665. Total energy = 5867.7757 kcal/mol (5856.1682 without restraints) Performing minimization step: 666. Total energy = 5858.5601 kcal/mol (5846.9553 without restraints) Performing minimization step: 667. Total energy = 5849.3610 kcal/mol (5837.7588 without restraints) Performing minimization step: 668. Total energy = 5840.1784 kcal/mol (5828.5788 without restraints) Performing minimization step: 669. Total energy = 5831.0122 kcal/mol (5819.4153 without restraints) Performing minimization step: 670. Total energy = 5821.8624 kcal/mol (5810.2681 without restraints) Performing minimization step: 671. Total energy = 5812.7289 kcal/mol (5801.1372 without restraints) Performing minimization step: 672. Total energy = 5803.6117 kcal/mol (5792.0227 without restraints) Performing minimization step: 673. Total energy = 5794.5109 kcal/mol (5782.9245 without restraints) Performing minimization step: 674. Total energy = 5785.4262 kcal/mol (5773.8424 without restraints) Performing minimization step: 675. Total energy = 5776.3577 kcal/mol (5764.7765 without restraints) Performing minimization step: 676. Total energy = 5767.3054 kcal/mol (5755.7268 without restraints) Performing minimization step: 677. Total energy = 5758.2692 kcal/mol (5746.6932 without restraints) Performing minimization step: 678. Total energy = 5749.2491 kcal/mol (5737.6758 without restraints) Performing minimization step: 679. Total energy = 5740.2451 kcal/mol (5728.6744 without restraints) Performing minimization step: 680. Total energy = 5731.2571 kcal/mol (5719.6889 without restraints) Performing minimization step: 681. Total energy = 5722.2851 kcal/mol (5710.7195 without restraints) Performing minimization step: 682. Total energy = 5713.3291 kcal/mol (5701.7661 without restraints) Performing minimization step: 683. Total energy = 5704.3891 kcal/mol (5692.8287 without restraints) Performing minimization step: 684. Total energy = 5695.4649 kcal/mol (5683.9071 without restraints) Performing minimization step: 685. Total energy = 5686.5566 kcal/mol (5675.0014 without restraints) Performing minimization step: 686. Total energy = 5677.6644 kcal/mol (5666.1117 without restraints) Performing minimization step: 687. Total energy = 5668.7878 kcal/mol (5657.2377 without restraints) Performing minimization step: 688. Total energy = 5659.9270 kcal/mol (5648.3795 without restraints) Performing minimization step: 689. Total energy = 5651.0820 kcal/mol (5639.5371 without restraints) Performing minimization step: 690. Total energy = 5642.2527 kcal/mol (5630.7104 without restraints) Performing minimization step: 691. Total energy = 5633.4396 kcal/mol (5621.8999 without restraints) Performing minimization step: 692. Total energy = 5624.6416 kcal/mol (5613.1044 without restraints) Performing minimization step: 693. Total energy = 5615.8594 kcal/mol (5604.3248 without restraints) Performing minimization step: 694. Total energy = 5607.0930 kcal/mol (5595.5609 without restraints) Performing minimization step: 695. Total energy = 5598.3421 kcal/mol (5586.8126 without restraints) Performing minimization step: 696. Total energy = 5589.6068 kcal/mol (5578.0798 without restraints) Performing minimization step: 697. Total energy = 5580.8871 kcal/mol (5569.3629 without restraints) Performing minimization step: 698. Total energy = 5572.1831 kcal/mol (5560.6613 without restraints) Performing minimization step: 699. Total energy = 5563.4947 kcal/mol (5551.9755 without restraints) Performing minimization step: 700. Total energy = 5554.8216 kcal/mol (5543.3049 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/97a58f6c/tmp/complex_refx/complex_refx.pdb ...Done. Performing minimization step: 701. Total energy = 5546.1640 kcal/mol (5534.6498 without restraints) Performing minimization step: 702. Total energy = 5537.5216 kcal/mol (5526.0100 without restraints) Performing minimization step: 703. Total energy = 5528.8949 kcal/mol (5517.3859 without restraints) Performing minimization step: 704. Total energy = 5520.2837 kcal/mol (5508.7772 without restraints) Performing minimization step: 705. Total energy = 5511.6881 kcal/mol (5500.1842 without restraints) Performing minimization step: 706. Total energy = 5503.1077 kcal/mol (5491.6063 without restraints) Performing minimization step: 707. Total energy = 5494.5426 kcal/mol (5483.0438 without restraints) Performing minimization step: 708. Total energy = 5485.9929 kcal/mol (5474.4966 without restraints) Performing minimization step: 709. Total energy = 5477.4586 kcal/mol (5465.9649 without restraints) Performing minimization step: 710. Total energy = 5468.9402 kcal/mol (5457.4491 without restraints) Performing minimization step: 711. Total energy = 5460.4368 kcal/mol (5448.9482 without restraints) Performing minimization step: 712. Total energy = 5451.9484 kcal/mol (5440.4623 without restraints) Performing minimization step: 713. Total energy = 5443.4753 kcal/mol (5431.9917 without restraints) Performing minimization step: 714. Total energy = 5435.0174 kcal/mol (5423.5364 without restraints) Performing minimization step: 715. Total energy = 5426.5748 kcal/mol (5415.0963 without restraints) Performing minimization step: 716. Total energy = 5418.1475 kcal/mol (5406.6717 without restraints) Performing minimization step: 717. Total energy = 5409.7354 kcal/mol (5398.2620 without restraints) Performing minimization step: 718. Total energy = 5401.3385 kcal/mol (5389.8677 without restraints) Performing minimization step: 719. Total energy = 5392.9569 kcal/mol (5381.4887 without restraints) Performing minimization step: 720. Total energy = 5384.5903 kcal/mol (5373.1246 without restraints) Performing minimization step: 721. Total energy = 5376.2387 kcal/mol (5364.7754 without restraints) Performing minimization step: 722. Total energy = 5367.9022 kcal/mol (5356.4416 without restraints) Performing minimization step: 723. Total energy = 5359.5809 kcal/mol (5348.1227 without restraints) Performing minimization step: 724. Total energy = 5351.2747 kcal/mol (5339.8191 without restraints) Performing minimization step: 725. Total energy = 5342.9835 kcal/mol (5331.5304 without restraints) Performing minimization step: 726. Total energy = 5334.7075 kcal/mol (5323.2570 without restraints) Performing minimization step: 727. Total energy = 5326.4469 kcal/mol (5314.9989 without restraints) Performing minimization step: 728. Total energy = 5318.2010 kcal/mol (5306.7556 without restraints) Performing minimization step: 729. Total energy = 5309.9702 kcal/mol (5298.5273 without restraints) Performing minimization step: 730. Total energy = 5301.7545 kcal/mol (5290.3141 without restraints) Performing minimization step: 731. Total energy = 5293.5534 kcal/mol (5282.1156 without restraints) Performing minimization step: 732. Total energy = 5285.3677 kcal/mol (5273.9324 without restraints) Performing minimization step: 733. Total energy = 5277.1969 kcal/mol (5265.7641 without restraints) Performing minimization step: 734. Total energy = 5269.0411 kcal/mol (5257.6108 without restraints) Performing minimization step: 735. Total energy = 5260.9003 kcal/mol (5249.4727 without restraints) Performing minimization step: 736. Total energy = 5252.7745 kcal/mol (5241.3493 without restraints) Performing minimization step: 737. Total energy = 5244.6636 kcal/mol (5233.2409 without restraints) Performing minimization step: 738. Total energy = 5236.5676 kcal/mol (5225.1474 without restraints) Performing minimization step: 739. Total energy = 5228.4862 kcal/mol (5217.0686 without restraints) Performing minimization step: 740. Total energy = 5220.4200 kcal/mol (5209.0049 without restraints) Performing minimization step: 741. Total energy = 5212.3687 kcal/mol (5200.9561 without restraints) Performing minimization step: 742. Total energy = 5204.3320 kcal/mol (5192.9220 without restraints) Performing minimization step: 743. Total energy = 5196.3105 kcal/mol (5184.9030 without restraints) Performing minimization step: 744. Total energy = 5188.3037 kcal/mol (5176.8988 without restraints) Performing minimization step: 745. Total energy = 5180.3119 kcal/mol (5168.9094 without restraints) Performing minimization step: 746. Total energy = 5172.3348 kcal/mol (5160.9349 without restraints) Performing minimization step: 747. Total energy = 5164.3726 kcal/mol (5152.9752 without restraints) Performing minimization step: 748. Total energy = 5156.4252 kcal/mol (5145.0303 without restraints) Performing minimization step: 749. Total energy = 5148.4925 kcal/mol (5137.1002 without restraints) Performing minimization step: 750. Total energy = 5140.5748 kcal/mol (5129.1850 without restraints) Performing minimization step: 751. Total energy = 5132.6718 kcal/mol (5121.2847 without restraints) Performing minimization step: 752. Total energy = 5124.7836 kcal/mol (5113.3989 without restraints) Performing minimization step: 753. Total energy = 5116.9102 kcal/mol (5105.5281 without restraints) Performing minimization step: 754. Total energy = 5109.0515 kcal/mol (5097.6719 without restraints) Performing minimization step: 755. Total energy = 5101.2075 kcal/mol (5089.8303 without restraints) Performing minimization step: 756. Total energy = 5093.3781 kcal/mol (5082.0035 without restraints) Performing minimization step: 757. Total energy = 5085.5635 kcal/mol (5074.1914 without restraints) Performing minimization step: 758. Total energy = 5077.7638 kcal/mol (5066.3942 without restraints) Performing minimization step: 759. Total energy = 5069.9785 kcal/mol (5058.6115 without restraints) Performing minimization step: 760. Total energy = 5062.2076 kcal/mol (5050.8431 without restraints) Performing minimization step: 761. Total energy = 5054.4517 kcal/mol (5043.0898 without restraints) Performing minimization step: 762. Total energy = 5046.7105 kcal/mol (5035.3511 without restraints) Performing minimization step: 763. Total energy = 5038.9839 kcal/mol (5027.6271 without restraints) Performing minimization step: 764. Total energy = 5031.2720 kcal/mol (5019.9176 without restraints) Performing minimization step: 765. Total energy = 5023.5747 kcal/mol (5012.2229 without restraints) Performing minimization step: 766. Total energy = 5015.8920 kcal/mol (5004.5427 without restraints) Performing minimization step: 767. Total energy = 5008.2239 kcal/mol (4996.8772 without restraints) Performing minimization step: 768. Total energy = 5000.5704 kcal/mol (4989.2262 without restraints) Performing minimization step: 769. Total energy = 4992.9315 kcal/mol (4981.5898 without restraints) Performing minimization step: 770. Total energy = 4985.3071 kcal/mol (4973.9680 without restraints) Performing minimization step: 771. Total energy = 4977.6973 kcal/mol (4966.3607 without restraints) Performing minimization step: 772. Total energy = 4970.1021 kcal/mol (4958.7680 without restraints) Performing minimization step: 773. Total energy = 4962.5214 kcal/mol (4951.1899 without restraints) Performing minimization step: 774. Total energy = 4954.9551 kcal/mol (4943.6261 without restraints) Performing minimization step: 775. Total energy = 4947.4035 kcal/mol (4936.0770 without restraints) Performing minimization step: 776. Total energy = 4939.8664 kcal/mol (4928.5424 without restraints) Performing minimization step: 777. Total energy = 4932.3441 kcal/mol (4921.0226 without restraints) Performing minimization step: 778. Total energy = 4924.8360 kcal/mol (4913.5170 without restraints) Performing minimization step: 779. Total energy = 4917.3427 kcal/mol (4906.0264 without restraints) Performing minimization step: 780. Total energy = 4909.8637 kcal/mol (4898.5498 without restraints) Performing minimization step: 781. Total energy = 4902.3988 kcal/mol (4891.0875 without restraints) Performing minimization step: 782. Total energy = 4894.9486 kcal/mol (4883.6398 without restraints) Performing minimization step: 783. Total energy = 4887.5128 kcal/mol (4876.2065 without restraints) Performing minimization step: 784. Total energy = 4880.0914 kcal/mol (4868.7876 without restraints) Performing minimization step: 785. Total energy = 4872.6843 kcal/mol (4861.3830 without restraints) Performing minimization step: 786. Total energy = 4865.2917 kcal/mol (4853.9930 without restraints) Performing minimization step: 787. Total energy = 4857.9136 kcal/mol (4846.6174 without restraints) Performing minimization step: 788. Total energy = 4850.5498 kcal/mol (4839.2562 without restraints) Performing minimization step: 789. Total energy = 4843.2005 kcal/mol (4831.9094 without restraints) Performing minimization step: 790. Total energy = 4835.8655 kcal/mol (4824.5769 without restraints) Performing minimization step: 791. Total energy = 4828.5448 kcal/mol (4817.2588 without restraints) Performing minimization step: 792. Total energy = 4821.2385 kcal/mol (4809.9550 without restraints) Performing minimization step: 793. Total energy = 4813.9466 kcal/mol (4802.6656 without restraints) Performing minimization step: 794. Total energy = 4806.6689 kcal/mol (4795.3905 without restraints) Performing minimization step: 795. Total energy = 4799.4056 kcal/mol (4788.1297 without restraints) Performing minimization step: 796. Total energy = 4792.1566 kcal/mol (4780.8832 without restraints) Performing minimization step: 797. Total energy = 4784.9218 kcal/mol (4773.6510 without restraints) Performing minimization step: 798. Total energy = 4777.7014 kcal/mol (4766.4331 without restraints) Performing minimization step: 799. Total energy = 4770.4953 kcal/mol (4759.2295 without restraints) Performing minimization step: 800. Total energy = 4763.3034 kcal/mol (4752.0401 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/97a58f6c/tmp/complex_refx/complex_refx.pdb ...Done. Performing minimization step: 801. Total energy = 4756.1257 kcal/mol (4744.8650 without restraints) Performing minimization step: 802. Total energy = 4748.9619 kcal/mol (4737.7037 without restraints) Performing minimization step: 803. Total energy = 4741.8129 kcal/mol (4730.5572 without restraints) Performing minimization step: 804. Total energy = 4734.6779 kcal/mol (4723.4248 without restraints) Performing minimization step: 805. Total energy = 4727.5571 kcal/mol (4716.3065 without restraints) Performing minimization step: 806. Total energy = 4720.4506 kcal/mol (4709.2027 without restraints) Performing minimization step: 807. Total energy = 4713.3583 kcal/mol (4702.1128 without restraints) Performing minimization step: 808. Total energy = 4706.2802 kcal/mol (4695.0372 without restraints) Performing minimization step: 809. Total energy = 4699.2161 kcal/mol (4687.9757 without restraints) Performing minimization step: 810. Total energy = 4692.1662 kcal/mol (4680.9283 without restraints) Performing minimization step: 811. Total energy = 4685.1305 kcal/mol (4673.8951 without restraints) Performing minimization step: 812. Total energy = 4678.1088 kcal/mol (4666.8759 without restraints) Performing minimization step: 813. Total energy = 4671.1013 kcal/mol (4659.8710 without restraints) Performing minimization step: 814. Total energy = 4664.1081 kcal/mol (4652.8803 without restraints) Performing minimization step: 815. Total energy = 4657.1288 kcal/mol (4645.9036 without restraints) Performing minimization step: 816. Total energy = 4650.1635 kcal/mol (4638.9408 without restraints) Performing minimization step: 817. Total energy = 4643.2123 kcal/mol (4631.9922 without restraints) Performing minimization step: 818. Total energy = 4636.2752 kcal/mol (4625.0576 without restraints) Performing minimization step: 819. Total energy = 4629.3522 kcal/mol (4618.1371 without restraints) Performing minimization step: 820. Total energy = 4622.4434 kcal/mol (4611.2308 without restraints) Performing minimization step: 821. Total energy = 4615.5484 kcal/mol (4604.3384 without restraints) Performing minimization step: 822. Total energy = 4608.6674 kcal/mol (4597.4600 without restraints) Performing minimization step: 823. Total energy = 4601.8005 kcal/mol (4590.5955 without restraints) Performing minimization step: 824. Total energy = 4594.9474 kcal/mol (4583.7450 without restraints) Performing minimization step: 825. Total energy = 4588.1084 kcal/mol (4576.9085 without restraints) Performing minimization step: 826. Total energy = 4581.2836 kcal/mol (4570.0863 without restraints) Performing minimization step: 827. Total energy = 4574.4724 kcal/mol (4563.2776 without restraints) Performing minimization step: 828. Total energy = 4567.6752 kcal/mol (4556.4830 without restraints) Performing minimization step: 829. Total energy = 4560.8921 kcal/mol (4549.7023 without restraints) Performing minimization step: 830. Total energy = 4554.1228 kcal/mol (4542.9356 without restraints) Performing minimization step: 831. Total energy = 4547.3673 kcal/mol (4536.1826 without restraints) Performing minimization step: 832. Total energy = 4540.6258 kcal/mol (4529.4437 without restraints) Performing minimization step: 833. Total energy = 4533.8982 kcal/mol (4522.7186 without restraints) Performing minimization step: 834. Total energy = 4527.1838 kcal/mol (4516.0067 without restraints) Performing minimization step: 835. Total energy = 4520.4839 kcal/mol (4509.3094 without restraints) Performing minimization step: 836. Total energy = 4513.7979 kcal/mol (4502.6260 without restraints) Performing minimization step: 837. Total energy = 4507.1259 kcal/mol (4495.9566 without restraints) Performing minimization step: 838. Total energy = 4500.4676 kcal/mol (4489.3008 without restraints) Performing minimization step: 839. Total energy = 4493.8231 kcal/mol (4482.6588 without restraints) Performing minimization step: 840. Total energy = 4487.1924 kcal/mol (4476.0306 without restraints) Performing minimization step: 841. Total energy = 4480.5756 kcal/mol (4469.4164 without restraints) Performing minimization step: 842. Total energy = 4473.9725 kcal/mol (4462.8158 without restraints) Performing minimization step: 843. Total energy = 4467.3830 kcal/mol (4456.2288 without restraints) Performing minimization step: 844. Total energy = 4460.8074 kcal/mol (4449.6559 without restraints) Performing minimization step: 845. Total energy = 4454.2460 kcal/mol (4443.0969 without restraints) Performing minimization step: 846. Total energy = 4447.6978 kcal/mol (4436.5512 without restraints) Performing minimization step: 847. Total energy = 4441.1633 kcal/mol (4430.0192 without restraints) Performing minimization step: 848. Total energy = 4434.6425 kcal/mol (4423.5010 without restraints) Performing minimization step: 849. Total energy = 4428.1354 kcal/mol (4416.9964 without restraints) Performing minimization step: 850. Total energy = 4421.6420 kcal/mol (4410.5056 without restraints) Performing minimization step: 851. Total energy = 4415.1620 kcal/mol (4404.0281 without restraints) Performing minimization step: 852. Total energy = 4408.6958 kcal/mol (4397.5645 without restraints) Performing minimization step: 853. Total energy = 4402.2437 kcal/mol (4391.1149 without restraints) Performing minimization step: 854. Total energy = 4395.8049 kcal/mol (4384.6786 without restraints) Performing minimization step: 855. Total energy = 4389.3796 kcal/mol (4378.2559 without restraints) Performing minimization step: 856. Total energy = 4382.9679 kcal/mol (4371.8468 without restraints) Performing minimization step: 857. Total energy = 4376.5700 kcal/mol (4365.4514 without restraints) Performing minimization step: 858. Total energy = 4370.1855 kcal/mol (4359.0694 without restraints) Performing minimization step: 859. Total energy = 4363.8145 kcal/mol (4352.7010 without restraints) Performing minimization step: 860. Total energy = 4357.4571 kcal/mol (4346.3461 without restraints) Performing minimization step: 861. Total energy = 4351.1134 kcal/mol (4340.0049 without restraints) Performing minimization step: 862. Total energy = 4344.7830 kcal/mol (4333.6771 without restraints) Performing minimization step: 863. Total energy = 4338.4661 kcal/mol (4327.3627 without restraints) Performing minimization step: 864. Total energy = 4332.1627 kcal/mol (4321.0618 without restraints) Performing minimization step: 865. Total energy = 4325.8727 kcal/mol (4314.7744 without restraints) Performing minimization step: 866. Total energy = 4319.5962 kcal/mol (4308.5005 without restraints) Performing minimization step: 867. Total energy = 4313.3334 kcal/mol (4302.2401 without restraints) Performing minimization step: 868. Total energy = 4307.0837 kcal/mol (4295.9931 without restraints) Performing minimization step: 869. Total energy = 4300.8475 kcal/mol (4289.7594 without restraints) Performing minimization step: 870. Total energy = 4294.6250 kcal/mol (4283.5394 without restraints) Performing minimization step: 871. Total energy = 4288.4156 kcal/mol (4277.3325 without restraints) Performing minimization step: 872. Total energy = 4282.2193 kcal/mol (4271.1388 without restraints) Performing minimization step: 873. Total energy = 4276.0370 kcal/mol (4264.9590 without restraints) Performing minimization step: 874. Total energy = 4269.8676 kcal/mol (4258.7922 without restraints) Performing minimization step: 875. Total energy = 4263.7116 kcal/mol (4252.6387 without restraints) Performing minimization step: 876. Total energy = 4257.5689 kcal/mol (4246.4985 without restraints) Performing minimization step: 877. Total energy = 4251.4393 kcal/mol (4240.3715 without restraints) Performing minimization step: 878. Total energy = 4245.3232 kcal/mol (4234.2579 without restraints) Performing minimization step: 879. Total energy = 4239.2203 kcal/mol (4228.1576 without restraints) Performing minimization step: 880. Total energy = 4233.1307 kcal/mol (4222.0706 without restraints) Performing minimization step: 881. Total energy = 4227.0544 kcal/mol (4215.9967 without restraints) Performing minimization step: 882. Total energy = 4220.9912 kcal/mol (4209.9361 without restraints) Performing minimization step: 883. Total energy = 4214.9411 kcal/mol (4203.8885 without restraints) Performing minimization step: 884. Total energy = 4208.9043 kcal/mol (4197.8543 without restraints) Performing minimization step: 885. Total energy = 4202.8808 kcal/mol (4191.8334 without restraints) Performing minimization step: 886. Total energy = 4196.8706 kcal/mol (4185.8257 without restraints) Performing minimization step: 887. Total energy = 4190.8736 kcal/mol (4179.8312 without restraints) Performing minimization step: 888. Total energy = 4184.8895 kcal/mol (4173.8497 without restraints) Performing minimization step: 889. Total energy = 4178.9185 kcal/mol (4167.8812 without restraints) Performing minimization step: 890. Total energy = 4172.9605 kcal/mol (4161.9257 without restraints) Performing minimization step: 891. Total energy = 4167.0155 kcal/mol (4155.9831 without restraints) Performing minimization step: 892. Total energy = 4161.0836 kcal/mol (4150.0539 without restraints) Performing minimization step: 893. Total energy = 4155.1649 kcal/mol (4144.1378 without restraints) Performing minimization step: 894. Total energy = 4149.2592 kcal/mol (4138.2347 without restraints) Performing minimization step: 895. Total energy = 4143.3666 kcal/mol (4132.3446 without restraints) Performing minimization step: 896. Total energy = 4137.4870 kcal/mol (4126.4675 without restraints) Performing minimization step: 897. Total energy = 4131.6207 kcal/mol (4120.6038 without restraints) Performing minimization step: 898. Total energy = 4125.7670 kcal/mol (4114.7526 without restraints) Performing minimization step: 899. Total energy = 4119.9263 kcal/mol (4108.9145 without restraints) Performing minimization step: 900. Total energy = 4114.0986 kcal/mol (4103.0893 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/97a58f6c/tmp/complex_refx/complex_refx.pdb ...Done. Performing minimization step: 901. Total energy = 4108.2837 kcal/mol (4097.2770 without restraints) Performing minimization step: 902. Total energy = 4102.4818 kcal/mol (4091.4776 without restraints) Performing minimization step: 903. Total energy = 4096.6928 kcal/mol (4085.6911 without restraints) Performing minimization step: 904. Total energy = 4090.9166 kcal/mol (4079.9175 without restraints) Performing minimization step: 905. Total energy = 4085.1533 kcal/mol (4074.1567 without restraints) Performing minimization step: 906. Total energy = 4079.4029 kcal/mol (4068.4088 without restraints) Performing minimization step: 907. Total energy = 4073.6652 kcal/mol (4062.6737 without restraints) Performing minimization step: 908. Total energy = 4067.9404 kcal/mol (4056.9514 without restraints) Performing minimization step: 909. Total energy = 4062.2284 kcal/mol (4051.2420 without restraints) Performing minimization step: 910. Total energy = 4056.5292 kcal/mol (4045.5453 without restraints) Performing minimization step: 911. Total energy = 4050.8426 kcal/mol (4039.8612 without restraints) Performing minimization step: 912. Total energy = 4045.1688 kcal/mol (4034.1899 without restraints) Performing minimization step: 913. Total energy = 4039.5077 kcal/mol (4028.5315 without restraints) Performing minimization step: 914. Total energy = 4033.8594 kcal/mol (4022.8857 without restraints) Performing minimization step: 915. Total energy = 4028.2238 kcal/mol (4017.2527 without restraints) Performing minimization step: 916. Total energy = 4022.6009 kcal/mol (4011.6322 without restraints) Performing minimization step: 917. Total energy = 4016.9900 kcal/mol (4006.0239 without restraints) Performing minimization step: 918. Total energy = 4011.3923 kcal/mol (4000.4287 without restraints) Performing minimization step: 919. Total energy = 4005.8070 kcal/mol (3994.8458 without restraints) Performing minimization step: 920. Total energy = 4000.2343 kcal/mol (3989.2757 without restraints) Performing minimization step: 921. Total energy = 3994.6743 kcal/mol (3983.7184 without restraints) Performing minimization step: 922. Total energy = 3989.1271 kcal/mol (3978.1738 without restraints) Performing minimization step: 923. Total energy = 3983.5927 kcal/mol (3972.6419 without restraints) Performing minimization step: 924. Total energy = 3978.0705 kcal/mol (3967.1222 without restraints) Performing minimization step: 925. Total energy = 3972.5610 kcal/mol (3961.6152 without restraints) Performing minimization step: 926. Total energy = 3967.0641 kcal/mol (3956.1209 without restraints) Performing minimization step: 927. Total energy = 3961.5793 kcal/mol (3950.6386 without restraints) Performing minimization step: 928. Total energy = 3956.1071 kcal/mol (3945.1689 without restraints) Performing minimization step: 929. Total energy = 3950.6472 kcal/mol (3939.7116 without restraints) Performing minimization step: 930. Total energy = 3945.1998 kcal/mol (3934.2667 without restraints) Performing minimization step: 931. Total energy = 3939.7647 kcal/mol (3928.8342 without restraints) Performing minimization step: 932. Total energy = 3934.3419 kcal/mol (3923.4139 without restraints) Performing minimization step: 933. Total energy = 3928.9316 kcal/mol (3918.0062 without restraints) Performing minimization step: 934. Total energy = 3923.5339 kcal/mol (3912.6110 without restraints) Performing minimization step: 935. Total energy = 3918.1482 kcal/mol (3907.2278 without restraints) Performing minimization step: 936. Total energy = 3912.7749 kcal/mol (3901.8571 without restraints) Performing minimization step: 937. Total energy = 3907.4140 kcal/mol (3896.4987 without restraints) Performing minimization step: 938. Total energy = 3902.0653 kcal/mol (3891.1525 without restraints) Performing minimization step: 939. Total energy = 3896.7288 kcal/mol (3885.8185 without restraints) Performing minimization step: 940. Total energy = 3891.4045 kcal/mol (3880.4968 without restraints) Performing minimization step: 941. Total energy = 3886.0926 kcal/mol (3875.1875 without restraints) Performing minimization step: 942. Total energy = 3880.7927 kcal/mol (3869.8901 without restraints) Performing minimization step: 943. Total energy = 3875.5054 kcal/mol (3864.6054 without restraints) Performing minimization step: 944. Total energy = 3870.2299 kcal/mol (3859.3324 without restraints) Performing minimization step: 945. Total energy = 3864.9664 kcal/mol (3854.0713 without restraints) Performing minimization step: 946. Total energy = 3859.7150 kcal/mol (3848.8225 without restraints) Performing minimization step: 947. Total energy = 3854.4754 kcal/mol (3843.5855 without restraints) Performing minimization step: 948. Total energy = 3849.2482 kcal/mol (3838.3609 without restraints) Performing minimization step: 949. Total energy = 3844.0330 kcal/mol (3833.1481 without restraints) Performing minimization step: 950. Total energy = 3838.8299 kcal/mol (3827.9476 without restraints) Performing minimization step: 951. Total energy = 3833.6388 kcal/mol (3822.7590 without restraints) Performing minimization step: 952. Total energy = 3828.4597 kcal/mol (3817.5825 without restraints) Performing minimization step: 953. Total energy = 3823.2927 kcal/mol (3812.4180 without restraints) Performing minimization step: 954. Total energy = 3818.1375 kcal/mol (3807.2653 without restraints) Performing minimization step: 955. Total energy = 3812.9942 kcal/mol (3802.1246 without restraints) Performing minimization step: 956. Total energy = 3807.8630 kcal/mol (3796.9960 without restraints) Performing minimization step: 957. Total energy = 3802.7438 kcal/mol (3791.8793 without restraints) Performing minimization step: 958. Total energy = 3797.6364 kcal/mol (3786.7744 without restraints) Performing minimization step: 959. Total energy = 3792.5409 kcal/mol (3781.6814 without restraints) Performing minimization step: 960. Total energy = 3787.4571 kcal/mol (3776.6001 without restraints) Performing minimization step: 961. Total energy = 3782.3852 kcal/mol (3771.5308 without restraints) Performing minimization step: 962. Total energy = 3777.3249 kcal/mol (3766.4730 without restraints) Performing minimization step: 963. Total energy = 3772.2765 kcal/mol (3761.4273 without restraints) Performing minimization step: 964. Total energy = 3767.2399 kcal/mol (3756.3931 without restraints) Performing minimization step: 965. Total energy = 3762.2151 kcal/mol (3751.3708 without restraints) Performing minimization step: 966. Total energy = 3757.2017 kcal/mol (3746.3600 without restraints) Performing minimization step: 967. Total energy = 3752.2000 kcal/mol (3741.3608 without restraints) Performing minimization step: 968. Total energy = 3747.2099 kcal/mol (3736.3734 without restraints) Performing minimization step: 969. Total energy = 3742.2317 kcal/mol (3731.3976 without restraints) Performing minimization step: 970. Total energy = 3737.2652 kcal/mol (3726.4336 without restraints) Performing minimization step: 971. Total energy = 3732.3098 kcal/mol (3721.4807 without restraints) Performing minimization step: 972. Total energy = 3727.3662 kcal/mol (3716.5396 without restraints) Performing minimization step: 973. Total energy = 3722.4344 kcal/mol (3711.6104 without restraints) Performing minimization step: 974. Total energy = 3717.5139 kcal/mol (3706.6924 without restraints) Performing minimization step: 975. Total energy = 3712.6049 kcal/mol (3701.7860 without restraints) Performing minimization step: 976. Total energy = 3707.7075 kcal/mol (3696.8911 without restraints) Performing minimization step: 977. Total energy = 3702.8214 kcal/mol (3692.0075 without restraints) Performing minimization step: 978. Total energy = 3697.9468 kcal/mol (3687.1354 without restraints) Performing minimization step: 979. Total energy = 3693.0836 kcal/mol (3682.2747 without restraints) Performing minimization step: 980. Total energy = 3688.2319 kcal/mol (3677.4257 without restraints) Performing minimization step: 981. Total energy = 3683.3915 kcal/mol (3672.5878 without restraints) Performing minimization step: 982. Total energy = 3678.5622 kcal/mol (3667.7610 without restraints) Performing minimization step: 983. Total energy = 3673.7443 kcal/mol (3662.9456 without restraints) Performing minimization step: 984. Total energy = 3668.9378 kcal/mol (3658.1417 without restraints) Performing minimization step: 985. Total energy = 3664.1427 kcal/mol (3653.3490 without restraints) Performing minimization step: 986. Total energy = 3659.3588 kcal/mol (3648.5677 without restraints) Performing minimization step: 987. Total energy = 3654.5861 kcal/mol (3643.7975 without restraints) Performing minimization step: 988. Total energy = 3649.8247 kcal/mol (3639.0387 without restraints) Performing minimization step: 989. Total energy = 3645.0745 kcal/mol (3634.2909 without restraints) Performing minimization step: 990. Total energy = 3640.3354 kcal/mol (3629.5544 without restraints) Performing minimization step: 991. Total energy = 3635.6076 kcal/mol (3624.8291 without restraints) Performing minimization step: 992. Total energy = 3630.8908 kcal/mol (3620.1148 without restraints) Performing minimization step: 993. Total energy = 3626.1850 kcal/mol (3615.4116 without restraints) Performing minimization step: 994. Total energy = 3621.4904 kcal/mol (3610.7195 without restraints) Performing minimization step: 995. Total energy = 3616.8068 kcal/mol (3606.0384 without restraints) Performing minimization step: 996. Total energy = 3612.1344 kcal/mol (3601.3688 without restraints) Performing minimization step: 997. Total energy = 3607.4731 kcal/mol (3596.7098 without restraints) Performing minimization step: 998. Total energy = 3602.8225 kcal/mol (3592.0617 without restraints) Performing minimization step: 999. Total energy = 3598.1829 kcal/mol (3587.4246 without restraints) Performing minimization step: 1000. Total energy = 3593.5542 kcal/mol (3582.7984 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/97a58f6c/tmp/complex_refx/complex_refx.pdb ...Done. Performing minimization step: 1001. Total energy = 3588.9364 kcal/mol (3578.1831 without restraints) Performing minimization step: 1002. Total energy = 3584.3297 kcal/mol (3573.5789 without restraints) Performing minimization step: 1003. Total energy = 3579.7336 kcal/mol (3568.9854 without restraints) Performing minimization step: 1004. Total energy = 3575.1484 kcal/mol (3564.4027 without restraints) Performing minimization step: 1005. Total energy = 3570.5740 kcal/mol (3559.8309 without restraints) Performing minimization step: 1006. Total energy = 3566.0104 kcal/mol (3555.2698 without restraints) Performing minimization step: 1007. Total energy = 3561.4576 kcal/mol (3550.7195 without restraints) Performing minimization step: 1008. Total energy = 3556.9155 kcal/mol (3546.1799 without restraints) Performing minimization step: 1009. Total energy = 3552.3841 kcal/mol (3541.6510 without restraints) Performing minimization step: 1010. Total energy = 3547.8633 kcal/mol (3537.1327 without restraints) Performing minimization step: 1011. Total energy = 3543.3532 kcal/mol (3532.6252 without restraints) Performing minimization step: 1012. Total energy = 3538.8539 kcal/mol (3528.1283 without restraints) Performing minimization step: 1013. Total energy = 3534.3651 kcal/mol (3523.6421 without restraints) Performing minimization step: 1014. Total energy = 3529.8870 kcal/mol (3519.1665 without restraints) Performing minimization step: 1015. Total energy = 3525.4194 kcal/mol (3514.7014 without restraints) Performing minimization step: 1016. Total energy = 3520.9624 kcal/mol (3510.2469 without restraints) Performing minimization step: 1017. Total energy = 3516.5159 kcal/mol (3505.8029 without restraints) Performing minimization step: 1018. Total energy = 3512.0799 kcal/mol (3501.3694 without restraints) Performing minimization step: 1019. Total energy = 3507.6543 kcal/mol (3496.9464 without restraints) Performing minimization step: 1020. Total energy = 3503.2392 kcal/mol (3492.5338 without restraints) Performing minimization step: 1021. Total energy = 3498.8345 kcal/mol (3488.1317 without restraints) Performing minimization step: 1022. Total energy = 3494.4405 kcal/mol (3483.7401 without restraints) Performing minimization step: 1023. Total energy = 3490.0566 kcal/mol (3479.3587 without restraints) Performing minimization step: 1024. Total energy = 3485.6830 kcal/mol (3474.9877 without restraints) Performing minimization step: 1025. Total energy = 3481.3198 kcal/mol (3470.6270 without restraints) Performing minimization step: 1026. Total energy = 3476.9669 kcal/mol (3466.2765 without restraints) Performing minimization step: 1027. Total energy = 3472.6242 kcal/mol (3461.9364 without restraints) Performing minimization step: 1028. Total energy = 3468.2918 kcal/mol (3457.6065 without restraints) Performing minimization step: 1029. Total energy = 3463.9696 kcal/mol (3453.2868 without restraints) Performing minimization step: 1030. Total energy = 3459.6576 kcal/mol (3448.9773 without restraints) Performing minimization step: 1031. Total energy = 3455.3557 kcal/mol (3444.6780 without restraints) Performing minimization step: 1032. Total energy = 3451.0641 kcal/mol (3440.3888 without restraints) Performing minimization step: 1033. Total energy = 3446.7825 kcal/mol (3436.1097 without restraints) Performing minimization step: 1034. Total energy = 3442.5110 kcal/mol (3431.8408 without restraints) Performing minimization step: 1035. Total energy = 3438.2496 kcal/mol (3427.5819 without restraints) Performing minimization step: 1036. Total energy = 3433.9983 kcal/mol (3423.3330 without restraints) Performing minimization step: 1037. Total energy = 3429.7569 kcal/mol (3419.0942 without restraints) Performing minimization step: 1038. Total energy = 3425.5255 kcal/mol (3414.8653 without restraints) Performing minimization step: 1039. Total energy = 3421.3041 kcal/mol (3410.6464 without restraints) Performing minimization step: 1040. Total energy = 3417.0922 kcal/mol (3406.4368 without restraints) Performing minimization step: 1041. Total energy = 3412.8903 kcal/mol (3402.2375 without restraints) Performing minimization step: 1042. Total energy = 3408.6986 kcal/mol (3398.0484 without restraints) Performing minimization step: 1043. Total energy = 3404.5168 kcal/mol (3393.8691 without restraints) Performing minimization step: 1044. Total energy = 3400.3450 kcal/mol (3389.6998 without restraints) Performing minimization step: 1045. Total energy = 3396.1828 kcal/mol (3385.5401 without restraints) Performing minimization step: 1046. Total energy = 3392.0304 kcal/mol (3381.3902 without restraints) Performing minimization step: 1047. Total energy = 3387.8878 kcal/mol (3377.2501 without restraints) Performing minimization step: 1048. Total energy = 3383.7550 kcal/mol (3373.1199 without restraints) Performing minimization step: 1049. Total energy = 3379.6322 kcal/mol (3368.9995 without restraints) Performing minimization step: 1050. Total energy = 3375.5187 kcal/mol (3364.8885 without restraints) Performing minimization step: 1051. Total energy = 3371.4146 kcal/mol (3360.7869 without restraints) Performing minimization step: 1052. Total energy = 3367.3203 kcal/mol (3356.6951 without restraints) Performing minimization step: 1053. Total energy = 3363.2357 kcal/mol (3352.6130 without restraints) Performing minimization step: 1054. Total energy = 3359.1607 kcal/mol (3348.5403 without restraints) Performing minimization step: 1055. Total energy = 3355.0950 kcal/mol (3344.4773 without restraints) Performing minimization step: 1056. Total energy = 3351.0391 kcal/mol (3340.4239 without restraints) Performing minimization step: 1057. Total energy = 3346.9926 kcal/mol (3336.3799 without restraints) Performing minimization step: 1058. Total energy = 3342.9556 kcal/mol (3332.3454 without restraints) Performing minimization step: 1059. Total energy = 3338.9278 kcal/mol (3328.3201 without restraints) Performing minimization step: 1060. Total energy = 3334.9096 kcal/mol (3324.3044 without restraints) Performing minimization step: 1061. Total energy = 3330.9011 kcal/mol (3320.2984 without restraints) Performing minimization step: 1062. Total energy = 3326.9017 kcal/mol (3316.3015 without restraints) Performing minimization step: 1063. Total energy = 3322.9116 kcal/mol (3312.3139 without restraints) Performing minimization step: 1064. Total energy = 3318.9311 kcal/mol (3308.3360 without restraints) Performing minimization step: 1065. Total energy = 3314.9600 kcal/mol (3304.3674 without restraints) Performing minimization step: 1066. Total energy = 3310.9979 kcal/mol (3300.4076 without restraints) Performing minimization step: 1067. Total energy = 3307.0449 kcal/mol (3296.4572 without restraints) Performing minimization step: 1068. Total energy = 3303.1010 kcal/mol (3292.5157 without restraints) Performing minimization step: 1069. Total energy = 3299.1663 kcal/mol (3288.5836 without restraints) Performing minimization step: 1070. Total energy = 3295.2407 kcal/mol (3284.6604 without restraints) Performing minimization step: 1071. Total energy = 3291.3244 kcal/mol (3280.7466 without restraints) Performing minimization step: 1072. Total energy = 3287.4171 kcal/mol (3276.8418 without restraints) Performing minimization step: 1073. Total energy = 3283.5189 kcal/mol (3272.9461 without restraints) Performing minimization step: 1074. Total energy = 3279.6296 kcal/mol (3269.0592 without restraints) Performing minimization step: 1075. Total energy = 3275.7494 kcal/mol (3265.1816 without restraints) Performing minimization step: 1076. Total energy = 3271.8783 kcal/mol (3261.3130 without restraints) Performing minimization step: 1077. Total energy = 3268.0160 kcal/mol (3257.4531 without restraints) Performing minimization step: 1078. Total energy = 3264.1627 kcal/mol (3253.6023 without restraints) Performing minimization step: 1079. Total energy = 3260.3183 kcal/mol (3249.7605 without restraints) Performing minimization step: 1080. Total energy = 3256.4829 kcal/mol (3245.9274 without restraints) Performing minimization step: 1081. Total energy = 3252.6562 kcal/mol (3242.1033 without restraints) Performing minimization step: 1082. Total energy = 3248.8386 kcal/mol (3238.2882 without restraints) Performing minimization step: 1083. Total energy = 3245.0299 kcal/mol (3234.4820 without restraints) Performing minimization step: 1084. Total energy = 3241.2297 kcal/mol (3230.6842 without restraints) Performing minimization step: 1085. Total energy = 3237.4382 kcal/mol (3226.8952 without restraints) Performing minimization step: 1086. Total energy = 3233.6555 kcal/mol (3223.1150 without restraints) Performing minimization step: 1087. Total energy = 3229.8814 kcal/mol (3219.3434 without restraints) Performing minimization step: 1088. Total energy = 3226.1159 kcal/mol (3215.5804 without restraints) Performing minimization step: 1089. Total energy = 3222.3592 kcal/mol (3211.8261 without restraints) Performing minimization step: 1090. Total energy = 3218.6110 kcal/mol (3208.0805 without restraints) Performing minimization step: 1091. Total energy = 3214.8715 kcal/mol (3204.3434 without restraints) Performing minimization step: 1092. Total energy = 3211.1405 kcal/mol (3200.6149 without restraints) Performing minimization step: 1093. Total energy = 3207.4178 kcal/mol (3196.8947 without restraints) Performing minimization step: 1094. Total energy = 3203.7041 kcal/mol (3193.1835 without restraints) Performing minimization step: 1095. Total energy = 3199.9987 kcal/mol (3189.4805 without restraints) Performing minimization step: 1096. Total energy = 3196.3017 kcal/mol (3185.7860 without restraints) Performing minimization step: 1097. Total energy = 3192.6131 kcal/mol (3182.0999 without restraints) Performing minimization step: 1098. Total energy = 3188.9330 kcal/mol (3178.4223 without restraints) Performing minimization step: 1099. Total energy = 3185.2609 kcal/mol (3174.7526 without restraints) Performing minimization step: 1100. Total energy = 3181.5976 kcal/mol (3171.0918 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/97a58f6c/tmp/complex_refx/complex_refx.pdb ...Done. Performing minimization step: 1101. Total energy = 3177.9424 kcal/mol (3167.4392 without restraints) Performing minimization step: 1102. Total energy = 3174.2958 kcal/mol (3163.7950 without restraints) Performing minimization step: 1103. Total energy = 3170.6572 kcal/mol (3160.1589 without restraints) Performing minimization step: 1104. Total energy = 3167.0269 kcal/mol (3156.5311 without restraints) Performing minimization step: 1105. Total energy = 3163.4048 kcal/mol (3152.9114 without restraints) Performing minimization step: 1106. Total energy = 3159.7909 kcal/mol (3149.3000 without restraints) Performing minimization step: 1107. Total energy = 3156.1852 kcal/mol (3145.6967 without restraints) Performing minimization step: 1108. Total energy = 3152.5875 kcal/mol (3142.1016 without restraints) Performing minimization step: 1109. Total energy = 3148.9980 kcal/mol (3138.5145 without restraints) Performing minimization step: 1110. Total energy = 3145.4166 kcal/mol (3134.9355 without restraints) Performing minimization step: 1111. Total energy = 3141.8432 kcal/mol (3131.3646 without restraints) Performing minimization step: 1112. Total energy = 3138.2778 kcal/mol (3127.8017 without restraints) Performing minimization step: 1113. Total energy = 3134.7206 kcal/mol (3124.2471 without restraints) Performing minimization step: 1114. Total energy = 3131.1715 kcal/mol (3120.7004 without restraints) Performing minimization step: 1115. Total energy = 3127.6303 kcal/mol (3117.1616 without restraints) Performing minimization step: 1116. Total energy = 3124.0968 kcal/mol (3113.6306 without restraints) Performing minimization step: 1117. Total energy = 3120.5712 kcal/mol (3110.1075 without restraints) Performing minimization step: 1118. Total energy = 3117.0529 kcal/mol (3106.5914 without restraints) Performing minimization step: 1119. Total energy = 3113.5428 kcal/mol (3103.0840 without restraints) Performing minimization step: 1120. Total energy = 3110.0407 kcal/mol (3099.5843 without restraints) Performing minimization step: 1121. Total energy = 3106.5464 kcal/mol (3096.0925 without restraints) Performing minimization step: 1122. Total energy = 3103.0599 kcal/mol (3092.6085 without restraints) Performing minimization step: 1123. Total energy = 3099.5811 kcal/mol (3089.1322 without restraints) Performing minimization step: 1124. Total energy = 3096.1103 kcal/mol (3085.6638 without restraints) Performing minimization step: 1125. Total energy = 3092.6471 kcal/mol (3082.2031 without restraints) Performing minimization step: 1126. Total energy = 3089.1916 kcal/mol (3078.7500 without restraints) Performing minimization step: 1127. Total energy = 3085.7433 kcal/mol (3075.3042 without restraints) Performing minimization step: 1128. Total energy = 3082.3028 kcal/mol (3071.8662 without restraints) Performing minimization step: 1129. Total energy = 3078.8699 kcal/mol (3068.4357 without restraints) Performing minimization step: 1130. Total energy = 3075.4443 kcal/mol (3065.0126 without restraints) Performing minimization step: 1131. Total energy = 3072.0265 kcal/mol (3061.5973 without restraints) Performing minimization step: 1132. Total energy = 3068.6161 kcal/mol (3058.1892 without restraints) Performing minimization step: 1133. Total energy = 3065.2132 kcal/mol (3054.7889 without restraints) Performing minimization step: 1134. Total energy = 3061.8175 kcal/mol (3051.3957 without restraints) Performing minimization step: 1135. Total energy = 3058.4296 kcal/mol (3048.0102 without restraints) Performing minimization step: 1136. Total energy = 3055.0491 kcal/mol (3044.6322 without restraints) Performing minimization step: 1137. Total energy = 3051.6764 kcal/mol (3041.2619 without restraints) Performing minimization step: 1138. Total energy = 3048.3106 kcal/mol (3037.8986 without restraints) Performing minimization step: 1139. Total energy = 3044.9520 kcal/mol (3034.5425 without restraints) Performing minimization step: 1140. Total energy = 3041.6009 kcal/mol (3031.1938 without restraints) Performing minimization step: 1141. Total energy = 3038.2570 kcal/mol (3027.8524 without restraints) Performing minimization step: 1142. Total energy = 3034.9203 kcal/mol (3024.5182 without restraints) Performing minimization step: 1143. Total energy = 3031.5909 kcal/mol (3021.1913 without restraints) Performing minimization step: 1144. Total energy = 3028.2687 kcal/mol (3017.8715 without restraints) Performing minimization step: 1145. Total energy = 3024.9537 kcal/mol (3014.5589 without restraints) Performing minimization step: 1146. Total energy = 3021.6465 kcal/mol (3011.2543 without restraints) Performing minimization step: 1147. Total energy = 3018.3458 kcal/mol (3007.9560 without restraints) Performing minimization step: 1148. Total energy = 3015.0521 kcal/mol (3004.6648 without restraints) Performing minimization step: 1149. Total energy = 3011.7655 kcal/mol (3001.3806 without restraints) Performing minimization step: 1150. Total energy = 3008.4865 kcal/mol (2998.1040 without restraints) Performing minimization step: 1151. Total energy = 3005.2140 kcal/mol (2994.8340 without restraints) Performing minimization step: 1152. Total energy = 3001.9485 kcal/mol (2991.5709 without restraints) Performing minimization step: 1153. Total energy = 2998.6899 kcal/mol (2988.3148 without restraints) Performing minimization step: 1154. Total energy = 2995.4383 kcal/mol (2985.0657 without restraints) Performing minimization step: 1155. Total energy = 2992.1937 kcal/mol (2981.8235 without restraints) Performing minimization step: 1156. Total energy = 2988.9559 kcal/mol (2978.5882 without restraints) Performing minimization step: 1157. Total energy = 2985.7250 kcal/mol (2975.3598 without restraints) Performing minimization step: 1158. Total energy = 2982.5012 kcal/mol (2972.1384 without restraints) Performing minimization step: 1159. Total energy = 2979.2840 kcal/mol (2968.9237 without restraints) Performing minimization step: 1160. Total energy = 2976.0736 kcal/mol (2965.7157 without restraints) Performing minimization step: 1161. Total energy = 2972.8700 kcal/mol (2962.5145 without restraints) Performing minimization step: 1162. Total energy = 2969.6731 kcal/mol (2959.3202 without restraints) Performing minimization step: 1163. Total energy = 2966.4830 kcal/mol (2956.1325 without restraints) Performing minimization step: 1164. Total energy = 2963.2994 kcal/mol (2952.9514 without restraints) Performing minimization step: 1165. Total energy = 2960.1227 kcal/mol (2949.7771 without restraints) Performing minimization step: 1166. Total energy = 2956.9527 kcal/mol (2946.6095 without restraints) Performing minimization step: 1167. Total energy = 2953.7893 kcal/mol (2943.4486 without restraints) Performing minimization step: 1168. Total energy = 2950.6325 kcal/mol (2940.2943 without restraints) Performing minimization step: 1169. Total energy = 2947.4824 kcal/mol (2937.1468 without restraints) Performing minimization step: 1170. Total energy = 2944.3392 kcal/mol (2934.0059 without restraints) Performing minimization step: 1171. Total energy = 2941.2023 kcal/mol (2930.8715 without restraints) Performing minimization step: 1172. Total energy = 2938.0718 kcal/mol (2927.7434 without restraints) Performing minimization step: 1173. Total energy = 2934.9478 kcal/mol (2924.6218 without restraints) Performing minimization step: 1174. Total energy = 2931.8302 kcal/mol (2921.5067 without restraints) Performing minimization step: 1175. Total energy = 2928.7191 kcal/mol (2918.3980 without restraints) Performing minimization step: 1176. Total energy = 2925.6144 kcal/mol (2915.2958 without restraints) Performing minimization step: 1177. Total energy = 2922.5161 kcal/mol (2912.1999 without restraints) Performing minimization step: 1178. Total energy = 2919.4242 kcal/mol (2909.1105 without restraints) Performing minimization step: 1179. Total energy = 2916.3387 kcal/mol (2906.0274 without restraints) Performing minimization step: 1180. Total energy = 2913.2595 kcal/mol (2902.9507 without restraints) Performing minimization step: 1181. Total energy = 2910.1866 kcal/mol (2899.8802 without restraints) Performing minimization step: 1182. Total energy = 2907.1200 kcal/mol (2896.8161 without restraints) Performing minimization step: 1183. Total energy = 2904.0597 kcal/mol (2893.7582 without restraints) Performing minimization step: 1184. Total energy = 2901.0054 kcal/mol (2890.7064 without restraints) Performing minimization step: 1185. Total energy = 2897.9575 kcal/mol (2887.6610 without restraints) Performing minimization step: 1186. Total energy = 2894.9159 kcal/mol (2884.6218 without restraints) Performing minimization step: 1187. Total energy = 2891.8804 kcal/mol (2881.5888 without restraints) Performing minimization step: 1188. Total energy = 2888.8510 kcal/mol (2878.5618 without restraints) Performing minimization step: 1189. Total energy = 2885.8279 kcal/mol (2875.5413 without restraints) Performing minimization step: 1190. Total energy = 2882.8110 kcal/mol (2872.5267 without restraints) Performing minimization step: 1191. Total energy = 2879.8002 kcal/mol (2869.5184 without restraints) Performing minimization step: 1192. Total energy = 2876.7954 kcal/mol (2866.5160 without restraints) Performing minimization step: 1193. Total energy = 2873.7964 kcal/mol (2863.5194 without restraints) Performing minimization step: 1194. Total energy = 2870.8032 kcal/mol (2860.5287 without restraints) Performing minimization step: 1195. Total energy = 2867.8161 kcal/mol (2857.5441 without restraints) Performing minimization step: 1196. Total energy = 2864.8354 kcal/mol (2854.5658 without restraints) Performing minimization step: 1197. Total energy = 2861.8607 kcal/mol (2851.5936 without restraints) Performing minimization step: 1198. Total energy = 2858.8921 kcal/mol (2848.6274 without restraints) Performing minimization step: 1199. Total energy = 2855.9291 kcal/mol (2845.6669 without restraints) Performing minimization step: 1200. Total energy = 2852.9722 kcal/mol (2842.7125 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/97a58f6c/tmp/complex_refx/complex_refx.pdb ...Done. Performing minimization step: 1201. Total energy = 2850.0211 kcal/mol (2839.7637 without restraints) Performing minimization step: 1202. Total energy = 2847.0758 kcal/mol (2836.8209 without restraints) Performing minimization step: 1203. Total energy = 2844.1365 kcal/mol (2833.8840 without restraints) Performing minimization step: 1204. Total energy = 2841.2029 kcal/mol (2830.9529 without restraints) Performing minimization step: 1205. Total energy = 2838.2749 kcal/mol (2828.0273 without restraints) Performing minimization step: 1206. Total energy = 2835.3527 kcal/mol (2825.1076 without restraints) Performing minimization step: 1207. Total energy = 2832.4363 kcal/mol (2822.1937 without restraints) Performing minimization step: 1208. Total energy = 2829.5257 kcal/mol (2819.2856 without restraints) Performing minimization step: 1209. Total energy = 2826.6209 kcal/mol (2816.3832 without restraints) Performing minimization step: 1210. Total energy = 2823.7221 kcal/mol (2813.4868 without restraints) Performing minimization step: 1211. Total energy = 2820.8285 kcal/mol (2810.5957 without restraints) Performing minimization step: 1212. Total energy = 2817.9407 kcal/mol (2807.7103 without restraints) Performing minimization step: 1213. Total energy = 2815.0585 kcal/mol (2804.8306 without restraints) Performing minimization step: 1214. Total energy = 2812.1821 kcal/mol (2801.9567 without restraints) Performing minimization step: 1215. Total energy = 2809.3109 kcal/mol (2799.0879 without restraints) Performing minimization step: 1216. Total energy = 2806.4455 kcal/mol (2796.2249 without restraints) Performing minimization step: 1217. Total energy = 2803.5856 kcal/mol (2793.3675 without restraints) Performing minimization step: 1218. Total energy = 2800.7313 kcal/mol (2790.5156 without restraints) Performing minimization step: 1219. Total energy = 2797.8826 kcal/mol (2787.6695 without restraints) Performing minimization step: 1220. Total energy = 2795.0394 kcal/mol (2784.8286 without restraints) Performing minimization step: 1221. Total energy = 2792.2018 kcal/mol (2781.9935 without restraints) Performing minimization step: 1222. Total energy = 2789.3691 kcal/mol (2779.1633 without restraints) Performing minimization step: 1223. Total energy = 2786.5422 kcal/mol (2776.3388 without restraints) Performing minimization step: 1224. Total energy = 2783.7206 kcal/mol (2773.5196 without restraints) Performing minimization step: 1225. Total energy = 2780.9045 kcal/mol (2770.7060 without restraints) Performing minimization step: 1226. Total energy = 2778.0939 kcal/mol (2767.8979 without restraints) Performing minimization step: 1227. Total energy = 2775.2885 kcal/mol (2765.0950 without restraints) Performing minimization step: 1228. Total energy = 2772.4888 kcal/mol (2762.2977 without restraints) Performing minimization step: 1229. Total energy = 2769.6941 kcal/mol (2759.5055 without restraints) Performing minimization step: 1230. Total energy = 2766.9051 kcal/mol (2756.7189 without restraints) Performing minimization step: 1231. Total energy = 2764.1210 kcal/mol (2753.9373 without restraints) Performing minimization step: 1232. Total energy = 2761.3421 kcal/mol (2751.1607 without restraints) Performing minimization step: 1233. Total energy = 2758.5685 kcal/mol (2748.3898 without restraints) Performing minimization step: 1234. Total energy = 2755.8004 kcal/mol (2745.6240 without restraints) Performing minimization step: 1235. Total energy = 2753.0371 kcal/mol (2742.8632 without restraints) Performing minimization step: 1236. Total energy = 2750.2792 kcal/mol (2740.1077 without restraints) Performing minimization step: 1237. Total energy = 2747.5263 kcal/mol (2737.3573 without restraints) Performing minimization step: 1238. Total energy = 2744.7788 kcal/mol (2734.6122 without restraints) Performing minimization step: 1239. Total energy = 2742.0364 kcal/mol (2731.8723 without restraints) Performing minimization step: 1240. Total energy = 2739.2994 kcal/mol (2729.1378 without restraints) Performing minimization step: 1241. Total energy = 2736.5672 kcal/mol (2726.4080 without restraints) Performing minimization step: 1242. Total energy = 2733.8400 kcal/mol (2723.6833 without restraints) Performing minimization step: 1243. Total energy = 2731.1179 kcal/mol (2720.9636 without restraints) Performing minimization step: 1244. Total energy = 2728.4010 kcal/mol (2718.2492 without restraints) Performing minimization step: 1245. Total energy = 2725.6896 kcal/mol (2715.5403 without restraints) Performing minimization step: 1246. Total energy = 2722.9828 kcal/mol (2712.8360 without restraints) Performing minimization step: 1247. Total energy = 2720.2811 kcal/mol (2710.1366 without restraints) Performing minimization step: 1248. Total energy = 2717.5843 kcal/mol (2707.4423 without restraints) Performing minimization step: 1249. Total energy = 2714.8924 kcal/mol (2704.7529 without restraints) Performing minimization step: 1250. Total energy = 2712.2053 kcal/mol (2702.0683 without restraints) Performing minimization step: 1251. Total energy = 2709.5234 kcal/mol (2699.3888 without restraints) Performing minimization step: 1252. Total energy = 2706.8464 kcal/mol (2696.7143 without restraints) Performing minimization step: 1253. Total energy = 2704.1746 kcal/mol (2694.0449 without restraints) Performing minimization step: 1254. Total energy = 2701.5074 kcal/mol (2691.3802 without restraints) Performing minimization step: 1255. Total energy = 2698.8451 kcal/mol (2688.7204 without restraints) Performing minimization step: 1256. Total energy = 2696.1875 kcal/mol (2686.0651 without restraints) Performing minimization step: 1257. Total energy = 2693.5348 kcal/mol (2683.4150 without restraints) Performing minimization step: 1258. Total energy = 2690.8870 kcal/mol (2680.7697 without restraints) Performing minimization step: 1259. Total energy = 2688.2447 kcal/mol (2678.1298 without restraints) Performing minimization step: 1260. Total energy = 2685.6064 kcal/mol (2675.4940 without restraints) Performing minimization step: 1261. Total energy = 2682.9729 kcal/mol (2672.8629 without restraints) Performing minimization step: 1262. Total energy = 2680.3443 kcal/mol (2670.2368 without restraints) Performing minimization step: 1263. Total energy = 2677.7204 kcal/mol (2667.6154 without restraints) Performing minimization step: 1264. Total energy = 2675.1013 kcal/mol (2664.9988 without restraints) Performing minimization step: 1265. Total energy = 2672.4870 kcal/mol (2662.3869 without restraints) Performing minimization step: 1266. Total energy = 2669.8775 kcal/mol (2659.7799 without restraints) Performing minimization step: 1267. Total energy = 2667.2725 kcal/mol (2657.1774 without restraints) Performing minimization step: 1268. Total energy = 2664.6723 kcal/mol (2654.5796 without restraints) Performing minimization step: 1269. Total energy = 2662.0766 kcal/mol (2651.9864 without restraints) Performing minimization step: 1270. Total energy = 2659.4857 kcal/mol (2649.3979 without restraints) Performing minimization step: 1271. Total energy = 2656.8993 kcal/mol (2646.8141 without restraints) Performing minimization step: 1272. Total energy = 2654.3175 kcal/mol (2644.2348 without restraints) Performing minimization step: 1273. Total energy = 2651.7405 kcal/mol (2641.6602 without restraints) Performing minimization step: 1274. Total energy = 2649.1682 kcal/mol (2639.0903 without restraints) Performing minimization step: 1275. Total energy = 2646.6002 kcal/mol (2636.5247 without restraints) Performing minimization step: 1276. Total energy = 2644.0367 kcal/mol (2633.9638 without restraints) Performing minimization step: 1277. Total energy = 2641.4778 kcal/mol (2631.4074 without restraints) Performing minimization step: 1278. Total energy = 2638.9238 kcal/mol (2628.8558 without restraints) Performing minimization step: 1279. Total energy = 2636.3742 kcal/mol (2626.3087 without restraints) Performing minimization step: 1280. Total energy = 2633.8291 kcal/mol (2623.7661 without restraints) Performing minimization step: 1281. Total energy = 2631.2883 kcal/mol (2621.2278 without restraints) Performing minimization step: 1282. Total energy = 2628.7520 kcal/mol (2618.6939 without restraints) Performing minimization step: 1283. Total energy = 2626.2199 kcal/mol (2616.1643 without restraints) Performing minimization step: 1284. Total energy = 2623.6927 kcal/mol (2613.6396 without restraints) Performing minimization step: 1285. Total energy = 2621.1697 kcal/mol (2611.1189 without restraints) Performing minimization step: 1286. Total energy = 2618.6510 kcal/mol (2608.6028 without restraints) Performing minimization step: 1287. Total energy = 2616.1369 kcal/mol (2606.0912 without restraints) Performing minimization step: 1288. Total energy = 2613.6270 kcal/mol (2603.5838 without restraints) Performing minimization step: 1289. Total energy = 2611.1216 kcal/mol (2601.0809 without restraints) Performing minimization step: 1290. Total energy = 2608.6206 kcal/mol (2598.5824 without restraints) Performing minimization step: 1291. Total energy = 2606.1239 kcal/mol (2596.0882 without restraints) Performing minimization step: 1292. Total energy = 2603.6315 kcal/mol (2593.5981 without restraints) Performing minimization step: 1293. Total energy = 2601.1434 kcal/mol (2591.1126 without restraints) Performing minimization step: 1294. Total energy = 2598.6600 kcal/mol (2588.6316 without restraints) Performing minimization step: 1295. Total energy = 2596.1806 kcal/mol (2586.1548 without restraints) Performing minimization step: 1296. Total energy = 2593.7056 kcal/mol (2583.6822 without restraints) Performing minimization step: 1297. Total energy = 2591.2347 kcal/mol (2581.2137 without restraints) Performing minimization step: 1298. Total energy = 2588.7681 kcal/mol (2578.7497 without restraints) Performing minimization step: 1299. Total energy = 2586.3058 kcal/mol (2576.2899 without restraints) Performing minimization step: 1300. Total energy = 2583.8478 kcal/mol (2573.8344 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/97a58f6c/tmp/complex_refx/complex_refx.pdb ...Done. Performing minimization step: 1301. Total energy = 2581.3939 kcal/mol (2571.3829 without restraints) Performing minimization step: 1302. Total energy = 2578.9443 kcal/mol (2568.9358 without restraints) Performing minimization step: 1303. Total energy = 2576.4989 kcal/mol (2566.4929 without restraints) Performing minimization step: 1304. Total energy = 2574.0578 kcal/mol (2564.0542 without restraints) Performing minimization step: 1305. Total energy = 2571.6209 kcal/mol (2561.6199 without restraints) Performing minimization step: 1306. Total energy = 2569.1881 kcal/mol (2559.1895 without restraints) Performing minimization step: 1307. Total energy = 2566.7594 kcal/mol (2556.7633 without restraints) Performing minimization step: 1308. Total energy = 2564.3351 kcal/mol (2554.3415 without restraints) Performing minimization step: 1309. Total energy = 2561.9146 kcal/mol (2551.9236 without restraints) Performing minimization step: 1310. Total energy = 2559.4983 kcal/mol (2549.5098 without restraints) Performing minimization step: 1311. Total energy = 2557.0859 kcal/mol (2547.0998 without restraints) Performing minimization step: 1312. Total energy = 2554.6779 kcal/mol (2544.6943 without restraints) Performing minimization step: 1313. Total energy = 2552.2739 kcal/mol (2542.2928 without restraints) Performing minimization step: 1314. Total energy = 2549.8738 kcal/mol (2539.8951 without restraints) Performing minimization step: 1315. Total energy = 2547.4778 kcal/mol (2537.5016 without restraints) Performing minimization step: 1316. Total energy = 2545.0859 kcal/mol (2535.1122 without restraints) Performing minimization step: 1317. Total energy = 2542.6982 kcal/mol (2532.7271 without restraints) Performing minimization step: 1318. Total energy = 2540.3145 kcal/mol (2530.3458 without restraints) Performing minimization step: 1319. Total energy = 2537.9351 kcal/mol (2527.9690 without restraints) Performing minimization step: 1320. Total energy = 2535.5594 kcal/mol (2525.5958 without restraints) Performing minimization step: 1321. Total energy = 2533.1877 kcal/mol (2523.2265 without restraints) Performing minimization step: 1322. Total energy = 2530.8198 kcal/mol (2520.8612 without restraints) Performing minimization step: 1323. Total energy = 2528.4561 kcal/mol (2518.5000 without restraints) Performing minimization step: 1324. Total energy = 2526.0963 kcal/mol (2516.1427 without restraints) Performing minimization step: 1325. Total energy = 2523.7403 kcal/mol (2513.7892 without restraints) Performing minimization step: 1326. Total energy = 2521.3885 kcal/mol (2511.4398 without restraints) Performing minimization step: 1327. Total energy = 2519.0407 kcal/mol (2509.0946 without restraints) Performing minimization step: 1328. Total energy = 2516.6967 kcal/mol (2506.7531 without restraints) Performing minimization step: 1329. Total energy = 2514.3568 kcal/mol (2504.4157 without restraints) Performing minimization step: 1330. Total energy = 2512.0206 kcal/mol (2502.0820 without restraints) Performing minimization step: 1331. Total energy = 2509.6882 kcal/mol (2499.7521 without restraints) Performing minimization step: 1332. Total energy = 2507.3598 kcal/mol (2497.4262 without restraints) Performing minimization step: 1333. Total energy = 2505.0353 kcal/mol (2495.1042 without restraints) Performing minimization step: 1334. Total energy = 2502.7145 kcal/mol (2492.7860 without restraints) Performing minimization step: 1335. Total energy = 2500.3978 kcal/mol (2490.4718 without restraints) Performing minimization step: 1336. Total energy = 2498.0847 kcal/mol (2488.1611 without restraints) Performing minimization step: 1337. Total energy = 2495.7757 kcal/mol (2485.8547 without restraints) Performing minimization step: 1338. Total energy = 2493.4703 kcal/mol (2483.5518 without restraints) Performing minimization step: 1339. Total energy = 2491.1687 kcal/mol (2481.2527 without restraints) Performing minimization step: 1340. Total energy = 2488.8710 kcal/mol (2478.9575 without restraints) Performing minimization step: 1341. Total energy = 2486.5770 kcal/mol (2476.6660 without restraints) Performing minimization step: 1342. Total energy = 2484.2868 kcal/mol (2474.3783 without restraints) Performing minimization step: 1343. Total energy = 2482.0005 kcal/mol (2472.0947 without restraints) Performing minimization step: 1344. Total energy = 2479.7178 kcal/mol (2469.8144 without restraints) Performing minimization step: 1345. Total energy = 2477.4394 kcal/mol (2467.5384 without restraints) Performing minimization step: 1346. Total energy = 2475.1641 kcal/mol (2465.2657 without restraints) Performing minimization step: 1347. Total energy = 2472.8927 kcal/mol (2462.9968 without restraints) Performing minimization step: 1348. Total energy = 2470.6252 kcal/mol (2460.7318 without restraints) Performing minimization step: 1349. Total energy = 2468.3613 kcal/mol (2458.4706 without restraints) Performing minimization step: 1350. Total energy = 2466.1012 kcal/mol (2456.2128 without restraints) Performing minimization step: 1351. Total energy = 2463.8448 kcal/mol (2453.9589 without restraints) Performing minimization step: 1352. Total energy = 2461.5919 kcal/mol (2451.7085 without restraints) Performing minimization step: 1353. Total energy = 2459.3426 kcal/mol (2449.4618 without restraints) Performing minimization step: 1354. Total energy = 2457.0971 kcal/mol (2447.2188 without restraints) Performing minimization step: 1355. Total energy = 2454.8552 kcal/mol (2444.9795 without restraints) Performing minimization step: 1356. Total energy = 2452.6167 kcal/mol (2442.7435 without restraints) Performing minimization step: 1357. Total energy = 2450.3821 kcal/mol (2440.5115 without restraints) Performing minimization step: 1358. Total energy = 2448.1512 kcal/mol (2438.2830 without restraints) Performing minimization step: 1359. Total energy = 2445.9239 kcal/mol (2436.0582 without restraints) Performing minimization step: 1360. Total energy = 2443.7002 kcal/mol (2433.8371 without restraints) Performing minimization step: 1361. Total energy = 2441.4801 kcal/mol (2431.6197 without restraints) Performing minimization step: 1362. Total energy = 2439.2637 kcal/mol (2429.4057 without restraints) Performing minimization step: 1363. Total energy = 2437.0506 kcal/mol (2427.1951 without restraints) Performing minimization step: 1364. Total energy = 2434.8415 kcal/mol (2424.9885 without restraints) Performing minimization step: 1365. Total energy = 2432.6358 kcal/mol (2422.7853 without restraints) Performing minimization step: 1366. Total energy = 2430.4338 kcal/mol (2420.5858 without restraints) Performing minimization step: 1367. Total energy = 2428.2351 kcal/mol (2418.3898 without restraints) Performing minimization step: 1368. Total energy = 2426.0401 kcal/mol (2416.1972 without restraints) Performing minimization step: 1369. Total energy = 2423.8485 kcal/mol (2414.0082 without restraints) Performing minimization step: 1370. Total energy = 2421.6607 kcal/mol (2411.8229 without restraints) Performing minimization step: 1371. Total energy = 2419.4762 kcal/mol (2409.6410 without restraints) Performing minimization step: 1372. Total energy = 2417.2953 kcal/mol (2407.4626 without restraints) Performing minimization step: 1373. Total energy = 2415.1179 kcal/mol (2405.2877 without restraints) Performing minimization step: 1374. Total energy = 2412.9441 kcal/mol (2403.1165 without restraints) Performing minimization step: 1375. Total energy = 2410.7737 kcal/mol (2400.9486 without restraints) Performing minimization step: 1376. Total energy = 2408.6067 kcal/mol (2398.7842 without restraints) Performing minimization step: 1377. Total energy = 2406.4428 kcal/mol (2396.6228 without restraints) Performing minimization step: 1378. Total energy = 2404.2830 kcal/mol (2394.4656 without restraints) Performing minimization step: 1379. Total energy = 2402.1263 kcal/mol (2392.3114 without restraints) Performing minimization step: 1380. Total energy = 2399.9734 kcal/mol (2390.1611 without restraints) Performing minimization step: 1381. Total energy = 2397.8238 kcal/mol (2388.0140 without restraints) Performing minimization step: 1382. Total energy = 2395.6776 kcal/mol (2385.8703 without restraints) Performing minimization step: 1383. Total energy = 2393.5350 kcal/mol (2383.7303 without restraints) Performing minimization step: 1384. Total energy = 2391.3957 kcal/mol (2381.5935 without restraints) Performing minimization step: 1385. Total energy = 2389.2600 kcal/mol (2379.4604 without restraints) Performing minimization step: 1386. Total energy = 2387.1278 kcal/mol (2377.3307 without restraints) Performing minimization step: 1387. Total energy = 2384.9987 kcal/mol (2375.2042 without restraints) Performing minimization step: 1388. Total energy = 2382.8730 kcal/mol (2373.0811 without restraints) Performing minimization step: 1389. Total energy = 2380.7507 kcal/mol (2370.9613 without restraints) Performing minimization step: 1390. Total energy = 2378.6318 kcal/mol (2368.8449 without restraints) Performing minimization step: 1391. Total energy = 2376.5164 kcal/mol (2366.7321 without restraints) Performing minimization step: 1392. Total energy = 2374.4042 kcal/mol (2364.6225 without restraints) Performing minimization step: 1393. Total energy = 2372.2956 kcal/mol (2362.5165 without restraints) Performing minimization step: 1394. Total energy = 2370.1902 kcal/mol (2360.4136 without restraints) Performing minimization step: 1395. Total energy = 2368.0882 kcal/mol (2358.3142 without restraints) Performing minimization step: 1396. Total energy = 2365.9895 kcal/mol (2356.2180 without restraints) Performing minimization step: 1397. Total energy = 2363.8942 kcal/mol (2354.1253 without restraints) Performing minimization step: 1398. Total energy = 2361.8021 kcal/mol (2352.0357 without restraints) Performing minimization step: 1399. Total energy = 2359.7133 kcal/mol (2349.9495 without restraints) Performing minimization step: 1400. Total energy = 2357.6278 kcal/mol (2347.8666 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/97a58f6c/tmp/complex_refx/complex_refx.pdb ...Done. Performing minimization step: 1401. Total energy = 2355.5457 kcal/mol (2345.7870 without restraints) Performing minimization step: 1402. Total energy = 2353.4668 kcal/mol (2343.7107 without restraints) Performing minimization step: 1403. Total energy = 2351.3913 kcal/mol (2341.6377 without restraints) Performing minimization step: 1404. Total energy = 2349.3189 kcal/mol (2339.5679 without restraints) Performing minimization step: 1405. Total energy = 2347.2499 kcal/mol (2337.5015 without restraints) Performing minimization step: 1406. Total energy = 2345.1841 kcal/mol (2335.4383 without restraints) Performing minimization step: 1407. Total energy = 2343.1218 kcal/mol (2333.3786 without restraints) Performing minimization step: 1408. Total energy = 2341.0624 kcal/mol (2331.3217 without restraints) Performing minimization step: 1409. Total energy = 2339.0064 kcal/mol (2329.2683 without restraints) Performing minimization step: 1410. Total energy = 2336.9537 kcal/mol (2327.2181 without restraints) Performing minimization step: 1411. Total energy = 2334.9043 kcal/mol (2325.1713 without restraints) Performing minimization step: 1412. Total energy = 2332.8580 kcal/mol (2323.1276 without restraints) Performing minimization step: 1413. Total energy = 2330.8150 kcal/mol (2321.0872 without restraints) Performing minimization step: 1414. Total energy = 2328.7752 kcal/mol (2319.0500 without restraints) Performing minimization step: 1415. Total energy = 2326.7389 kcal/mol (2317.0162 without restraints) Performing minimization step: 1416. Total energy = 2324.7054 kcal/mol (2314.9853 without restraints) Performing minimization step: 1417. Total energy = 2322.6752 kcal/mol (2312.9577 without restraints) Performing minimization step: 1418. Total energy = 2320.6485 kcal/mol (2310.9336 without restraints) Performing minimization step: 1419. Total energy = 2318.6245 kcal/mol (2308.9121 without restraints) Performing minimization step: 1420. Total energy = 2316.6039 kcal/mol (2306.8941 without restraints) Performing minimization step: 1421. Total energy = 2314.5865 kcal/mol (2304.8793 without restraints) Performing minimization step: 1422. Total energy = 2312.5722 kcal/mol (2302.8676 without restraints) Performing minimization step: 1423. Total energy = 2310.5614 kcal/mol (2300.8594 without restraints) Performing minimization step: 1424. Total energy = 2308.5535 kcal/mol (2298.8541 without restraints) Performing minimization step: 1425. Total energy = 2306.5487 kcal/mol (2296.8519 without restraints) Performing minimization step: 1426. Total energy = 2304.5469 kcal/mol (2294.8527 without restraints) Performing minimization step: 1427. Total energy = 2302.5480 kcal/mol (2292.8563 without restraints) Performing minimization step: 1428. Total energy = 2300.5527 kcal/mol (2290.8636 without restraints) Performing minimization step: 1429. Total energy = 2298.5605 kcal/mol (2288.8740 without restraints) Performing minimization step: 1430. Total energy = 2296.5714 kcal/mol (2286.8876 without restraints) Performing minimization step: 1431. Total energy = 2294.5857 kcal/mol (2284.9044 without restraints) Performing minimization step: 1432. Total energy = 2292.6025 kcal/mol (2282.9237 without restraints) Performing minimization step: 1433. Total energy = 2290.6227 kcal/mol (2280.9466 without restraints) Performing minimization step: 1434. Total energy = 2288.6462 kcal/mol (2278.9728 without restraints) Performing minimization step: 1435. Total energy = 2286.6728 kcal/mol (2277.0019 without restraints) Performing minimization step: 1436. Total energy = 2284.7024 kcal/mol (2275.0341 without restraints) Performing minimization step: 1437. Total energy = 2282.7352 kcal/mol (2273.0695 without restraints) Performing minimization step: 1438. Total energy = 2280.7710 kcal/mol (2271.1079 without restraints) Performing minimization step: 1439. Total energy = 2278.8099 kcal/mol (2269.1494 without restraints) Performing minimization step: 1440. Total energy = 2276.8517 kcal/mol (2267.1938 without restraints) Performing minimization step: 1441. Total energy = 2274.8965 kcal/mol (2265.2412 without restraints) Performing minimization step: 1442. Total energy = 2272.9447 kcal/mol (2263.2920 without restraints) Performing minimization step: 1443. Total energy = 2270.9960 kcal/mol (2261.3459 without restraints) Performing minimization step: 1444. Total energy = 2269.0501 kcal/mol (2259.4026 without restraints) Performing minimization step: 1445. Total energy = 2267.1073 kcal/mol (2257.4625 without restraints) Performing minimization step: 1446. Total energy = 2265.1676 kcal/mol (2255.5253 without restraints) Performing minimization step: 1447. Total energy = 2263.2308 kcal/mol (2253.5912 without restraints) Performing minimization step: 1448. Total energy = 2261.2971 kcal/mol (2251.6602 without restraints) Performing minimization step: 1449. Total energy = 2259.3665 kcal/mol (2249.7321 without restraints) Performing minimization step: 1450. Total energy = 2257.4387 kcal/mol (2247.8068 without restraints) Performing minimization step: 1451. Total energy = 2255.5142 kcal/mol (2245.8850 without restraints) Performing minimization step: 1452. Total energy = 2253.5926 kcal/mol (2243.9660 without restraints) Performing minimization step: 1453. Total energy = 2251.6739 kcal/mol (2242.0500 without restraints) Performing minimization step: 1454. Total energy = 2249.7583 kcal/mol (2240.1369 without restraints) Performing minimization step: 1455. Total energy = 2247.8459 kcal/mol (2238.2271 without restraints) Performing minimization step: 1456. Total energy = 2245.9364 kcal/mol (2236.3203 without restraints) Performing minimization step: 1457. Total energy = 2244.0295 kcal/mol (2234.4160 without restraints) Performing minimization step: 1458. Total energy = 2242.1258 kcal/mol (2232.5149 without restraints) Performing minimization step: 1459. Total energy = 2240.2250 kcal/mol (2230.6168 without restraints) Performing minimization step: 1460. Total energy = 2238.3274 kcal/mol (2228.7218 without restraints) Performing minimization step: 1461. Total energy = 2236.4326 kcal/mol (2226.8296 without restraints) Performing minimization step: 1462. Total energy = 2234.5409 kcal/mol (2224.9406 without restraints) Performing minimization step: 1463. Total energy = 2232.6521 kcal/mol (2223.0544 without restraints) Performing minimization step: 1464. Total energy = 2230.7660 kcal/mol (2221.1709 without restraints) Performing minimization step: 1465. Total energy = 2228.8827 kcal/mol (2219.2902 without restraints) Performing minimization step: 1466. Total energy = 2227.0026 kcal/mol (2217.4127 without restraints) Performing minimization step: 1467. Total energy = 2225.1255 kcal/mol (2215.5382 without restraints) Performing minimization step: 1468. Total energy = 2223.2513 kcal/mol (2213.6668 without restraints) Performing minimization step: 1469. Total energy = 2221.3801 kcal/mol (2211.7981 without restraints) Performing minimization step: 1470. Total energy = 2219.5119 kcal/mol (2209.9326 without restraints) Performing minimization step: 1471. Total energy = 2217.6462 kcal/mol (2208.0695 without restraints) Performing minimization step: 1472. Total energy = 2215.7837 kcal/mol (2206.2096 without restraints) Performing minimization step: 1473. Total energy = 2213.9240 kcal/mol (2204.3526 without restraints) Performing minimization step: 1474. Total energy = 2212.0671 kcal/mol (2202.4983 without restraints) Performing minimization step: 1475. Total energy = 2210.2135 kcal/mol (2200.6474 without restraints) Performing minimization step: 1476. Total energy = 2208.3625 kcal/mol (2198.7990 without restraints) Performing minimization step: 1477. Total energy = 2206.5143 kcal/mol (2196.9534 without restraints) Performing minimization step: 1478. Total energy = 2204.6692 kcal/mol (2195.1109 without restraints) Performing minimization step: 1479. Total energy = 2202.8269 kcal/mol (2193.2713 without restraints) Performing minimization step: 1480. Total energy = 2200.9872 kcal/mol (2191.4343 without restraints) Performing minimization step: 1481. Total energy = 2199.1507 kcal/mol (2189.6004 without restraints) Performing minimization step: 1482. Total energy = 2197.3169 kcal/mol (2187.7693 without restraints) Performing minimization step: 1483. Total energy = 2195.4861 kcal/mol (2185.9411 without restraints) Performing minimization step: 1484. Total energy = 2193.6584 kcal/mol (2184.1160 without restraints) Performing minimization step: 1485. Total energy = 2191.8334 kcal/mol (2182.2937 without restraints) Performing minimization step: 1486. Total energy = 2190.0112 kcal/mol (2180.4741 without restraints) Performing minimization step: 1487. Total energy = 2188.1917 kcal/mol (2178.6574 without restraints) Performing minimization step: 1488. Total energy = 2186.3751 kcal/mol (2176.8434 without restraints) Performing minimization step: 1489. Total energy = 2184.5613 kcal/mol (2175.0322 without restraints) Performing minimization step: 1490. Total energy = 2182.7510 kcal/mol (2173.2245 without restraints) Performing minimization step: 1491. Total energy = 2180.9429 kcal/mol (2171.4191 without restraints) Performing minimization step: 1492. Total energy = 2179.1380 kcal/mol (2169.6168 without restraints) Performing minimization step: 1493. Total energy = 2177.3355 kcal/mol (2167.8170 without restraints) Performing minimization step: 1494. Total energy = 2175.5356 kcal/mol (2166.0198 without restraints) Performing minimization step: 1495. Total energy = 2173.7388 kcal/mol (2164.2256 without restraints) Performing minimization step: 1496. Total energy = 2171.9447 kcal/mol (2162.4342 without restraints) Performing minimization step: 1497. Total energy = 2170.1534 kcal/mol (2160.6456 without restraints) Performing minimization step: 1498. Total energy = 2168.3650 kcal/mol (2158.8598 without restraints) Performing minimization step: 1499. Total energy = 2166.5794 kcal/mol (2157.0768 without restraints) Performing minimization step: 1500. Total energy = 2164.7965 kcal/mol (2155.2967 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/97a58f6c/tmp/complex_refx/complex_refx.pdb ...Done. Performing minimization step: 1501. Total energy = 2163.0165 kcal/mol (2153.5193 without restraints) Performing minimization step: 1502. Total energy = 2161.2392 kcal/mol (2151.7446 without restraints) Performing minimization step: 1503. Total energy = 2159.4646 kcal/mol (2149.9728 without restraints) Performing minimization step: 1504. Total energy = 2157.6927 kcal/mol (2148.2035 without restraints) Performing minimization step: 1505. Total energy = 2155.9237 kcal/mol (2146.4372 without restraints) Performing minimization step: 1506. Total energy = 2154.1575 kcal/mol (2144.6736 without restraints) Performing minimization step: 1507. Total energy = 2152.3940 kcal/mol (2142.9128 without restraints) Performing minimization step: 1508. Total energy = 2150.6333 kcal/mol (2141.1548 without restraints) Performing minimization step: 1509. Total energy = 2148.8751 kcal/mol (2139.3993 without restraints) Performing minimization step: 1510. Total energy = 2147.1199 kcal/mol (2137.6467 without restraints) Performing minimization step: 1511. Total energy = 2145.3674 kcal/mol (2135.8969 without restraints) Performing minimization step: 1512. Total energy = 2143.6176 kcal/mol (2134.1499 without restraints) Performing minimization step: 1513. Total energy = 2141.8706 kcal/mol (2132.4055 without restraints) Performing minimization step: 1514. Total energy = 2140.1259 kcal/mol (2130.6634 without restraints) Performing minimization step: 1515. Total energy = 2138.3843 kcal/mol (2128.9246 without restraints) Performing minimization step: 1516. Total energy = 2136.6453 kcal/mol (2127.1882 without restraints) Performing minimization step: 1517. Total energy = 2134.9094 kcal/mol (2125.4550 without restraints) Performing minimization step: 1518. Total energy = 2133.1764 kcal/mol (2123.7247 without restraints) Performing minimization step: 1519. Total energy = 2131.4458 kcal/mol (2121.9968 without restraints) Performing minimization step: 1520. Total energy = 2129.7178 kcal/mol (2120.2715 without restraints) Performing minimization step: 1521. Total energy = 2127.9928 kcal/mol (2118.5491 without restraints) Performing minimization step: 1522. Total energy = 2126.2702 kcal/mol (2116.8292 without restraints) Performing minimization step: 1523. Total energy = 2124.5505 kcal/mol (2115.1122 without restraints) Performing minimization step: 1524. Total energy = 2122.8333 kcal/mol (2113.3977 without restraints) Performing minimization step: 1525. Total energy = 2121.1188 kcal/mol (2111.6859 without restraints) Performing minimization step: 1526. Total energy = 2119.4070 kcal/mol (2109.9767 without restraints) Performing minimization step: 1527. Total energy = 2117.6978 kcal/mol (2108.2703 without restraints) Performing minimization step: 1528. Total energy = 2115.9912 kcal/mol (2106.5664 without restraints) Performing minimization step: 1529. Total energy = 2114.2874 kcal/mol (2104.8653 without restraints) Performing minimization step: 1530. Total energy = 2112.5863 kcal/mol (2103.1668 without restraints) Performing minimization step: 1531. Total energy = 2110.8876 kcal/mol (2101.4709 without restraints) Performing minimization step: 1532. Total energy = 2109.1919 kcal/mol (2099.7779 without restraints) Performing minimization step: 1533. Total energy = 2107.4984 kcal/mol (2098.0870 without restraints) Performing minimization step: 1534. Total energy = 2105.8083 kcal/mol (2096.3996 without restraints) Performing minimization step: 1535. Total energy = 2104.1204 kcal/mol (2094.7145 without restraints) Performing minimization step: 1536. Total energy = 2102.4352 kcal/mol (2093.0320 without restraints) Performing minimization step: 1537. Total energy = 2100.7526 kcal/mol (2091.3519 without restraints) Performing minimization step: 1538. Total energy = 2099.0726 kcal/mol (2089.6747 without restraints) Performing minimization step: 1539. Total energy = 2097.3953 kcal/mol (2088.0002 without restraints) Performing minimization step: 1540. Total energy = 2095.7207 kcal/mol (2086.3283 without restraints) Performing minimization step: 1541. Total energy = 2094.0489 kcal/mol (2084.6592 without restraints) Performing minimization step: 1542. Total energy = 2092.3795 kcal/mol (2082.9925 without restraints) Performing minimization step: 1543. Total energy = 2090.7125 kcal/mol (2081.3282 without restraints) Performing minimization step: 1544. Total energy = 2089.0486 kcal/mol (2079.6671 without restraints) Performing minimization step: 1545. Total energy = 2087.3871 kcal/mol (2078.0083 without restraints) Performing minimization step: 1546. Total energy = 2085.7282 kcal/mol (2076.3521 without restraints) Performing minimization step: 1547. Total energy = 2084.0719 kcal/mol (2074.6985 without restraints) Performing minimization step: 1548. Total energy = 2082.4182 kcal/mol (2073.0475 without restraints) Performing minimization step: 1549. Total energy = 2080.7671 kcal/mol (2071.3991 without restraints) Performing minimization step: 1550. Total energy = 2079.1186 kcal/mol (2069.7533 without restraints) Performing minimization step: 1551. Total energy = 2077.4729 kcal/mol (2068.1103 without restraints) Performing minimization step: 1552. Total energy = 2075.8292 kcal/mol (2066.4692 without restraints) Performing minimization step: 1553. Total energy = 2074.1885 kcal/mol (2064.8314 without restraints) Performing minimization step: 1554. Total energy = 2072.5505 kcal/mol (2063.1961 without restraints) Performing minimization step: 1555. Total energy = 2070.9149 kcal/mol (2061.5633 without restraints) Performing minimization step: 1556. Total energy = 2069.2819 kcal/mol (2059.9330 without restraints) Performing minimization step: 1557. Total energy = 2067.6515 kcal/mol (2058.3052 without restraints) Performing minimization step: 1558. Total energy = 2066.0238 kcal/mol (2056.6803 without restraints) Performing minimization step: 1559. Total energy = 2064.3985 kcal/mol (2055.0577 without restraints) Performing minimization step: 1560. Total energy = 2062.7757 kcal/mol (2053.4377 without restraints) Performing minimization step: 1561. Total energy = 2061.1559 kcal/mol (2051.8206 without restraints) Performing minimization step: 1562. Total energy = 2059.5385 kcal/mol (2050.2059 without restraints) Performing minimization step: 1563. Total energy = 2057.9233 kcal/mol (2048.5935 without restraints) Performing minimization step: 1564. Total energy = 2056.3106 kcal/mol (2046.9834 without restraints) Performing minimization step: 1565. Total energy = 2054.7008 kcal/mol (2045.3764 without restraints) Performing minimization step: 1566. Total energy = 2053.0934 kcal/mol (2043.7717 without restraints) Performing minimization step: 1567. Total energy = 2051.4885 kcal/mol (2042.1695 without restraints) Performing minimization step: 1568. Total energy = 2049.8861 kcal/mol (2040.5699 without restraints) Performing minimization step: 1569. Total energy = 2048.2862 kcal/mol (2038.9727 without restraints) Performing minimization step: 1570. Total energy = 2046.6888 kcal/mol (2037.3781 without restraints) Performing minimization step: 1571. Total energy = 2045.0940 kcal/mol (2035.7860 without restraints) Performing minimization step: 1572. Total energy = 2043.5019 kcal/mol (2034.1966 without restraints) Performing minimization step: 1573. Total energy = 2041.9120 kcal/mol (2032.6095 without restraints) Performing minimization step: 1574. Total energy = 2040.3247 kcal/mol (2031.0250 without restraints) Performing minimization step: 1575. Total energy = 2038.7402 kcal/mol (2029.4432 without restraints) Performing minimization step: 1576. Total energy = 2037.1584 kcal/mol (2027.8641 without restraints) Performing minimization step: 1577. Total energy = 2035.5787 kcal/mol (2026.2873 without restraints) Performing minimization step: 1578. Total energy = 2034.0019 kcal/mol (2024.7132 without restraints) Performing minimization step: 1579. Total energy = 2032.4272 kcal/mol (2023.1411 without restraints) Performing minimization step: 1580. Total energy = 2030.8549 kcal/mol (2021.5716 without restraints) Performing minimization step: 1581. Total energy = 2029.2851 kcal/mol (2020.0046 without restraints) Performing minimization step: 1582. Total energy = 2027.7176 kcal/mol (2018.4398 without restraints) Performing minimization step: 1583. Total energy = 2026.1527 kcal/mol (2016.8777 without restraints) Performing minimization step: 1584. Total energy = 2024.5905 kcal/mol (2015.3183 without restraints) Performing minimization step: 1585. Total energy = 2023.0306 kcal/mol (2013.7611 without restraints) Performing minimization step: 1586. Total energy = 2021.4733 kcal/mol (2012.2065 without restraints) Performing minimization step: 1587. Total energy = 2019.9184 kcal/mol (2010.6544 without restraints) Performing minimization step: 1588. Total energy = 2018.3659 kcal/mol (2009.1047 without restraints) Performing minimization step: 1589. Total energy = 2016.8159 kcal/mol (2007.5574 without restraints) Performing minimization step: 1590. Total energy = 2015.2684 kcal/mol (2006.0127 without restraints) Performing minimization step: 1591. Total energy = 2013.7236 kcal/mol (2004.4706 without restraints) Performing minimization step: 1592. Total energy = 2012.1812 kcal/mol (2002.9310 without restraints) Performing minimization step: 1593. Total energy = 2010.6408 kcal/mol (2001.3934 without restraints) Performing minimization step: 1594. Total energy = 2009.1031 kcal/mol (1999.8584 without restraints) Performing minimization step: 1595. Total energy = 2007.5680 kcal/mol (1998.3260 without restraints) Performing minimization step: 1596. Total energy = 2006.0354 kcal/mol (1996.7962 without restraints) Performing minimization step: 1597. Total energy = 2004.5052 kcal/mol (1995.2688 without restraints) Performing minimization step: 1598. Total energy = 2002.9770 kcal/mol (1993.7434 without restraints) Performing minimization step: 1599. Total energy = 2001.4515 kcal/mol (1992.2206 without restraints) Performing minimization step: 1600. Total energy = 1999.9285 kcal/mol (1990.7004 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/97a58f6c/tmp/complex_refx/complex_refx.pdb ...Done. Performing minimization step: 1601. Total energy = 1998.4078 kcal/mol (1989.1825 without restraints) Performing minimization step: 1602. Total energy = 1996.8897 kcal/mol (1987.6672 without restraints) Performing minimization step: 1603. Total energy = 1995.3739 kcal/mol (1986.1541 without restraints) Performing minimization step: 1604. Total energy = 1993.8604 kcal/mol (1984.6434 without restraints) Performing minimization step: 1605. Total energy = 1992.3493 kcal/mol (1983.1351 without restraints) Performing minimization step: 1606. Total energy = 1990.8407 kcal/mol (1981.6293 without restraints) Performing minimization step: 1607. Total energy = 1989.3344 kcal/mol (1980.1256 without restraints) Performing minimization step: 1608. Total energy = 1987.8305 kcal/mol (1978.6246 without restraints) Performing minimization step: 1609. Total energy = 1986.3294 kcal/mol (1977.1264 without restraints) Performing minimization step: 1610. Total energy = 1984.8306 kcal/mol (1975.6302 without restraints) Performing minimization step: 1611. Total energy = 1983.3339 kcal/mol (1974.1363 without restraints) Performing minimization step: 1612. Total energy = 1981.8396 kcal/mol (1972.6448 without restraints) Performing minimization step: 1613. Total energy = 1980.3478 kcal/mol (1971.1558 without restraints) Performing minimization step: 1614. Total energy = 1978.8583 kcal/mol (1969.6691 without restraints) Performing minimization step: 1615. Total energy = 1977.3712 kcal/mol (1968.1848 without restraints) Performing minimization step: 1616. Total energy = 1975.8865 kcal/mol (1966.7028 without restraints) Performing minimization step: 1617. Total energy = 1974.4041 kcal/mol (1965.2233 without restraints) Performing minimization step: 1618. Total energy = 1972.9240 kcal/mol (1963.7459 without restraints) Performing minimization step: 1619. Total energy = 1971.4463 kcal/mol (1962.2709 without restraints) Performing minimization step: 1620. Total energy = 1969.9709 kcal/mol (1960.7984 without restraints) Performing minimization step: 1621. Total energy = 1968.4980 kcal/mol (1959.3283 without restraints) Performing minimization step: 1622. Total energy = 1967.0274 kcal/mol (1957.8605 without restraints) Performing minimization step: 1623. Total energy = 1965.5592 kcal/mol (1956.3951 without restraints) Performing minimization step: 1624. Total energy = 1964.0932 kcal/mol (1954.9319 without restraints) Performing minimization step: 1625. Total energy = 1962.6297 kcal/mol (1953.4712 without restraints) Performing minimization step: 1626. Total energy = 1961.1687 kcal/mol (1952.0131 without restraints) Performing minimization step: 1627. Total energy = 1959.7099 kcal/mol (1950.5569 without restraints) Performing minimization step: 1628. Total energy = 1958.2534 kcal/mol (1949.1032 without restraints) Performing minimization step: 1629. Total energy = 1956.7992 kcal/mol (1947.6519 without restraints) Performing minimization step: 1630. Total energy = 1955.3475 kcal/mol (1946.2030 without restraints) Performing minimization step: 1631. Total energy = 1953.8979 kcal/mol (1944.7561 without restraints) Performing minimization step: 1632. Total energy = 1952.4505 kcal/mol (1943.3116 without restraints) Performing minimization step: 1633. Total energy = 1951.0056 kcal/mol (1941.8696 without restraints) Performing minimization step: 1634. Total energy = 1949.5632 kcal/mol (1940.4299 without restraints) Performing minimization step: 1635. Total energy = 1948.1230 kcal/mol (1938.9925 without restraints) Performing minimization step: 1636. Total energy = 1946.6850 kcal/mol (1937.5573 without restraints) Performing minimization step: 1637. Total energy = 1945.2494 kcal/mol (1936.1245 without restraints) Performing minimization step: 1638. Total energy = 1943.8161 kcal/mol (1934.6940 without restraints) Performing minimization step: 1639. Total energy = 1942.3848 kcal/mol (1933.2656 without restraints) Performing minimization step: 1640. Total energy = 1940.9562 kcal/mol (1931.8397 without restraints) Performing minimization step: 1641. Total energy = 1939.5299 kcal/mol (1930.4162 without restraints) Performing minimization step: 1642. Total energy = 1938.1060 kcal/mol (1928.9951 without restraints) Performing minimization step: 1643. Total energy = 1936.6840 kcal/mol (1927.5760 without restraints) Performing minimization step: 1644. Total energy = 1935.2645 kcal/mol (1926.1593 without restraints) Performing minimization step: 1645. Total energy = 1933.8475 kcal/mol (1924.7452 without restraints) Performing minimization step: 1646. Total energy = 1932.4327 kcal/mol (1923.3331 without restraints) Performing minimization step: 1647. Total energy = 1931.0201 kcal/mol (1921.9233 without restraints) Performing minimization step: 1648. Total energy = 1929.6094 kcal/mol (1920.5154 without restraints) Performing minimization step: 1649. Total energy = 1928.2013 kcal/mol (1919.1102 without restraints) Performing minimization step: 1650. Total energy = 1926.7957 kcal/mol (1917.7074 without restraints) Performing minimization step: 1651. Total energy = 1925.3920 kcal/mol (1916.3066 without restraints) Performing minimization step: 1652. Total energy = 1923.9907 kcal/mol (1914.9079 without restraints) Performing minimization step: 1653. Total energy = 1922.5918 kcal/mol (1913.5120 without restraints) Performing minimization step: 1654. Total energy = 1921.1951 kcal/mol (1912.1181 without restraints) Performing minimization step: 1655. Total energy = 1919.8006 kcal/mol (1910.7265 without restraints) Performing minimization step: 1656. Total energy = 1918.4084 kcal/mol (1909.3371 without restraints) Performing minimization step: 1657. Total energy = 1917.0186 kcal/mol (1907.9501 without restraints) Performing minimization step: 1658. Total energy = 1915.6309 kcal/mol (1906.5652 without restraints) Performing minimization step: 1659. Total energy = 1914.2455 kcal/mol (1905.1826 without restraints) Performing minimization step: 1660. Total energy = 1912.8622 kcal/mol (1903.8022 without restraints) Performing minimization step: 1661. Total energy = 1911.4812 kcal/mol (1902.4240 without restraints) Performing minimization step: 1662. Total energy = 1910.1025 kcal/mol (1901.0481 without restraints) Performing minimization step: 1663. Total energy = 1908.7260 kcal/mol (1899.6745 without restraints) Performing minimization step: 1664. Total energy = 1907.3514 kcal/mol (1898.3027 without restraints) Performing minimization step: 1665. Total energy = 1905.9793 kcal/mol (1896.9335 without restraints) Performing minimization step: 1666. Total energy = 1904.6097 kcal/mol (1895.5667 without restraints) Performing minimization step: 1667. Total energy = 1903.2421 kcal/mol (1894.2019 without restraints) Performing minimization step: 1668. Total energy = 1901.8767 kcal/mol (1892.8393 without restraints) Performing minimization step: 1669. Total energy = 1900.5135 kcal/mol (1891.4789 without restraints) Performing minimization step: 1670. Total energy = 1899.1525 kcal/mol (1890.1208 without restraints) Performing minimization step: 1671. Total energy = 1897.7939 kcal/mol (1888.7652 without restraints) Performing minimization step: 1672. Total energy = 1896.4375 kcal/mol (1887.4115 without restraints) Performing minimization step: 1673. Total energy = 1895.0827 kcal/mol (1886.0596 without restraints) Performing minimization step: 1674. Total energy = 1893.7308 kcal/mol (1884.7105 without restraints) Performing minimization step: 1675. Total energy = 1892.3806 kcal/mol (1883.3631 without restraints) Performing minimization step: 1676. Total energy = 1891.0328 kcal/mol (1882.0182 without restraints) Performing minimization step: 1677. Total energy = 1889.6875 kcal/mol (1880.6758 without restraints) Performing minimization step: 1678. Total energy = 1888.3442 kcal/mol (1879.3352 without restraints) Performing minimization step: 1679. Total energy = 1887.0030 kcal/mol (1877.9969 without restraints) Performing minimization step: 1680. Total energy = 1885.6639 kcal/mol (1876.6607 without restraints) Performing minimization step: 1681. Total energy = 1884.3271 kcal/mol (1875.3268 without restraints) Performing minimization step: 1682. Total energy = 1882.9922 kcal/mol (1873.9947 without restraints) Performing minimization step: 1683. Total energy = 1881.6599 kcal/mol (1872.6652 without restraints) Performing minimization step: 1684. Total energy = 1880.3295 kcal/mol (1871.3377 without restraints) Performing minimization step: 1685. Total energy = 1879.0012 kcal/mol (1870.0122 without restraints) Performing minimization step: 1686. Total energy = 1877.6755 kcal/mol (1868.6894 without restraints) Performing minimization step: 1687. Total energy = 1876.3517 kcal/mol (1867.3685 without restraints) Performing minimization step: 1688. Total energy = 1875.0300 kcal/mol (1866.0497 without restraints) Performing minimization step: 1689. Total energy = 1873.7105 kcal/mol (1864.7330 without restraints) Performing minimization step: 1690. Total energy = 1872.3932 kcal/mol (1863.4185 without restraints) Performing minimization step: 1691. Total energy = 1871.0780 kcal/mol (1862.1062 without restraints) Performing minimization step: 1692. Total energy = 1869.7655 kcal/mol (1860.7966 without restraints) Performing minimization step: 1693. Total energy = 1868.4544 kcal/mol (1859.4883 without restraints) Performing minimization step: 1694. Total energy = 1867.1458 kcal/mol (1858.1827 without restraints) Performing minimization step: 1695. Total energy = 1865.8393 kcal/mol (1856.8789 without restraints) Performing minimization step: 1696. Total energy = 1864.5348 kcal/mol (1855.5773 without restraints) Performing minimization step: 1697. Total energy = 1863.2324 kcal/mol (1854.2777 without restraints) Performing minimization step: 1698. Total energy = 1861.9318 kcal/mol (1852.9801 without restraints) Performing minimization step: 1699. Total energy = 1860.6338 kcal/mol (1851.6849 without restraints) Performing minimization step: 1700. Total energy = 1859.3380 kcal/mol (1850.3920 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/97a58f6c/tmp/complex_refx/complex_refx.pdb ...Done. Performing minimization step: 1701. Total energy = 1858.0442 kcal/mol (1849.1011 without restraints) Performing minimization step: 1702. Total energy = 1856.7525 kcal/mol (1847.8122 without restraints) Performing minimization step: 1703. Total energy = 1855.4629 kcal/mol (1846.5255 without restraints) Performing minimization step: 1704. Total energy = 1854.1754 kcal/mol (1845.2409 without restraints) Performing minimization step: 1705. Total energy = 1852.8897 kcal/mol (1843.9581 without restraints) Performing minimization step: 1706. Total energy = 1851.6067 kcal/mol (1842.6780 without restraints) Performing minimization step: 1707. Total energy = 1850.3258 kcal/mol (1841.3999 without restraints) Performing minimization step: 1708. Total energy = 1849.0467 kcal/mol (1840.1237 without restraints) Performing minimization step: 1709. Total energy = 1847.7699 kcal/mol (1838.8497 without restraints) Performing minimization step: 1710. Total energy = 1846.4950 kcal/mol (1837.5778 without restraints) Performing minimization step: 1711. Total energy = 1845.2222 kcal/mol (1836.3079 without restraints) Performing minimization step: 1712. Total energy = 1843.9516 kcal/mol (1835.0401 without restraints) Performing minimization step: 1713. Total energy = 1842.6830 kcal/mol (1833.7744 without restraints) Performing minimization step: 1714. Total energy = 1841.4169 kcal/mol (1832.5111 without restraints) Performing minimization step: 1715. Total energy = 1840.1524 kcal/mol (1831.2496 without restraints) Performing minimization step: 1716. Total energy = 1838.8904 kcal/mol (1829.9904 without restraints) Performing minimization step: 1717. Total energy = 1837.6301 kcal/mol (1828.7331 without restraints) Performing minimization step: 1718. Total energy = 1836.3719 kcal/mol (1827.4778 without restraints) Performing minimization step: 1719. Total energy = 1835.1160 kcal/mol (1826.2247 without restraints) Performing minimization step: 1720. Total energy = 1833.8620 kcal/mol (1824.9736 without restraints) Performing minimization step: 1721. Total energy = 1832.6102 kcal/mol (1823.7247 without restraints) Performing minimization step: 1722. Total energy = 1831.3605 kcal/mol (1822.4779 without restraints) Performing minimization step: 1723. Total energy = 1830.1126 kcal/mol (1821.2329 without restraints) Performing minimization step: 1724. Total energy = 1828.8668 kcal/mol (1819.9900 without restraints) Performing minimization step: 1725. Total energy = 1827.6228 kcal/mol (1818.7489 without restraints) Performing minimization step: 1726. Total energy = 1826.3809 kcal/mol (1817.5099 without restraints) Performing minimization step: 1727. Total energy = 1825.1415 kcal/mol (1816.2734 without restraints) Performing minimization step: 1728. Total energy = 1823.9039 kcal/mol (1815.0386 without restraints) Performing minimization step: 1729. Total energy = 1822.6686 kcal/mol (1813.8062 without restraints) Performing minimization step: 1730. Total energy = 1821.4351 kcal/mol (1812.5756 without restraints) Performing minimization step: 1731. Total energy = 1820.2036 kcal/mol (1811.3470 without restraints) Performing minimization step: 1732. Total energy = 1818.9743 kcal/mol (1810.1207 without restraints) Performing minimization step: 1733. Total energy = 1817.7471 kcal/mol (1808.8964 without restraints) Performing minimization step: 1734. Total energy = 1816.5218 kcal/mol (1807.6739 without restraints) Performing minimization step: 1735. Total energy = 1815.2986 kcal/mol (1806.4537 without restraints) Performing minimization step: 1736. Total energy = 1814.0771 kcal/mol (1805.2351 without restraints) Performing minimization step: 1737. Total energy = 1812.8578 kcal/mol (1804.0187 without restraints) Performing minimization step: 1738. Total energy = 1811.6405 kcal/mol (1802.8043 without restraints) Performing minimization step: 1739. Total energy = 1810.4253 kcal/mol (1801.5920 without restraints) Performing minimization step: 1740. Total energy = 1809.2120 kcal/mol (1800.3816 without restraints) Performing minimization step: 1741. Total energy = 1808.0008 kcal/mol (1799.1733 without restraints) Performing minimization step: 1742. Total energy = 1806.7912 kcal/mol (1797.9666 without restraints) Performing minimization step: 1743. Total energy = 1805.5841 kcal/mol (1796.7624 without restraints) Performing minimization step: 1744. Total energy = 1804.3789 kcal/mol (1795.5602 without restraints) Performing minimization step: 1745. Total energy = 1803.1757 kcal/mol (1794.3598 without restraints) Performing minimization step: 1746. Total energy = 1801.9744 kcal/mol (1793.1615 without restraints) Performing minimization step: 1747. Total energy = 1800.7752 kcal/mol (1791.9651 without restraints) Performing minimization step: 1748. Total energy = 1799.5781 kcal/mol (1790.7710 without restraints) Performing minimization step: 1749. Total energy = 1798.3828 kcal/mol (1789.5786 without restraints) Performing minimization step: 1750. Total energy = 1797.1893 kcal/mol (1788.3880 without restraints) Performing minimization step: 1751. Total energy = 1795.9981 kcal/mol (1787.1999 without restraints) Performing minimization step: 1752. Total energy = 1794.8086 kcal/mol (1786.0131 without restraints) Performing minimization step: 1753. Total energy = 1793.6215 kcal/mol (1784.8289 without restraints) Performing minimization step: 1754. Total energy = 1792.4359 kcal/mol (1783.6463 without restraints) Performing minimization step: 1755. Total energy = 1791.2526 kcal/mol (1782.4660 without restraints) Performing minimization step: 1756. Total energy = 1790.0713 kcal/mol (1781.2875 without restraints) Performing minimization step: 1757. Total energy = 1788.8920 kcal/mol (1780.1112 without restraints) Performing minimization step: 1758. Total energy = 1787.7148 kcal/mol (1778.9369 without restraints) Performing minimization step: 1759. Total energy = 1786.5393 kcal/mol (1777.7643 without restraints) Performing minimization step: 1760. Total energy = 1785.3651 kcal/mol (1776.5929 without restraints) Performing minimization step: 1761. Total energy = 1784.1934 kcal/mol (1775.4242 without restraints) Performing minimization step: 1762. Total energy = 1783.0238 kcal/mol (1774.2575 without restraints) Performing minimization step: 1763. Total energy = 1781.8560 kcal/mol (1773.0928 without restraints) Performing minimization step: 1764. Total energy = 1780.6903 kcal/mol (1771.9299 without restraints) Performing minimization step: 1765. Total energy = 1779.5265 kcal/mol (1770.7692 without restraints) Performing minimization step: 1766. Total energy = 1778.3647 kcal/mol (1769.6103 without restraints) Performing minimization step: 1767. Total energy = 1777.2048 kcal/mol (1768.4532 without restraints) Performing minimization step: 1768. Total energy = 1776.0469 kcal/mol (1767.2982 without restraints) Performing minimization step: 1769. Total energy = 1774.8909 kcal/mol (1766.1453 without restraints) Performing minimization step: 1770. Total energy = 1773.7369 kcal/mol (1764.9941 without restraints) Performing minimization step: 1771. Total energy = 1772.5847 kcal/mol (1763.8449 without restraints) Performing minimization step: 1772. Total energy = 1771.4346 kcal/mol (1762.6977 without restraints) Performing minimization step: 1773. Total energy = 1770.2863 kcal/mol (1761.5523 without restraints) Performing minimization step: 1774. Total energy = 1769.1398 kcal/mol (1760.4088 without restraints) Performing minimization step: 1775. Total energy = 1767.9955 kcal/mol (1759.2674 without restraints) Performing minimization step: 1776. Total energy = 1766.8527 kcal/mol (1758.1276 without restraints) Performing minimization step: 1777. Total energy = 1765.7120 kcal/mol (1756.9898 without restraints) Performing minimization step: 1778. Total energy = 1764.5732 kcal/mol (1755.8540 without restraints) Performing minimization step: 1779. Total energy = 1763.4363 kcal/mol (1754.7200 without restraints) Performing minimization step: 1780. Total energy = 1762.3015 kcal/mol (1753.5882 without restraints) Performing minimization step: 1781. Total energy = 1761.1685 kcal/mol (1752.4581 without restraints) Performing minimization step: 1782. Total energy = 1760.0372 kcal/mol (1751.3297 without restraints) Performing minimization step: 1783. Total energy = 1758.9079 kcal/mol (1750.2034 without restraints) Performing minimization step: 1784. Total energy = 1757.7805 kcal/mol (1749.0789 without restraints) Performing minimization step: 1785. Total energy = 1756.6550 kcal/mol (1747.9564 without restraints) Performing minimization step: 1786. Total energy = 1755.5314 kcal/mol (1746.8357 without restraints) Performing minimization step: 1787. Total energy = 1754.4099 kcal/mol (1745.7171 without restraints) Performing minimization step: 1788. Total energy = 1753.2900 kcal/mol (1744.6002 without restraints) Performing minimization step: 1789. Total energy = 1752.1721 kcal/mol (1743.4852 without restraints) Performing minimization step: 1790. Total energy = 1751.0560 kcal/mol (1742.3721 without restraints) Performing minimization step: 1791. Total energy = 1749.9420 kcal/mol (1741.2611 without restraints) Performing minimization step: 1792. Total energy = 1748.8295 kcal/mol (1740.1514 without restraints) Performing minimization step: 1793. Total energy = 1747.7189 kcal/mol (1739.0439 without restraints) Performing minimization step: 1794. Total energy = 1746.6103 kcal/mol (1737.9383 without restraints) Performing minimization step: 1795. Total energy = 1745.5036 kcal/mol (1736.8345 without restraints) Performing minimization step: 1796. Total energy = 1744.3990 kcal/mol (1735.7328 without restraints) Performing minimization step: 1797. Total energy = 1743.2959 kcal/mol (1734.6327 without restraints) Performing minimization step: 1798. Total energy = 1742.1946 kcal/mol (1733.5343 without restraints) Performing minimization step: 1799. Total energy = 1741.0953 kcal/mol (1732.4380 without restraints) Performing minimization step: 1800. Total energy = 1739.9978 kcal/mol (1731.3435 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/97a58f6c/tmp/complex_refx/complex_refx.pdb ...Done. Performing minimization step: 1801. Total energy = 1738.9024 kcal/mol (1730.2511 without restraints) Performing minimization step: 1802. Total energy = 1737.8088 kcal/mol (1729.1604 without restraints) Performing minimization step: 1803. Total energy = 1736.7169 kcal/mol (1728.0715 without restraints) Performing minimization step: 1804. Total energy = 1735.6268 kcal/mol (1726.9843 without restraints) Performing minimization step: 1805. Total energy = 1734.5386 kcal/mol (1725.8991 without restraints) Performing minimization step: 1806. Total energy = 1733.4522 kcal/mol (1724.8156 without restraints) Performing minimization step: 1807. Total energy = 1732.3676 kcal/mol (1723.7340 without restraints) Performing minimization step: 1808. Total energy = 1731.2849 kcal/mol (1722.6543 without restraints) Performing minimization step: 1809. Total energy = 1730.2040 kcal/mol (1721.5763 without restraints) Performing minimization step: 1810. Total energy = 1729.1250 kcal/mol (1720.5004 without restraints) Performing minimization step: 1811. Total energy = 1728.0479 kcal/mol (1719.4261 without restraints) Performing minimization step: 1812. Total energy = 1726.9726 kcal/mol (1718.3539 without restraints) Performing minimization step: 1813. Total energy = 1725.8990 kcal/mol (1717.2832 without restraints) Performing minimization step: 1814. Total energy = 1724.8274 kcal/mol (1716.2146 without restraints) Performing minimization step: 1815. Total energy = 1723.7574 kcal/mol (1715.1476 without restraints) Performing minimization step: 1816. Total energy = 1722.6893 kcal/mol (1714.0824 without restraints) Performing minimization step: 1817. Total energy = 1721.6230 kcal/mol (1713.0192 without restraints) Performing minimization step: 1818. Total energy = 1720.5585 kcal/mol (1711.9576 without restraints) Performing minimization step: 1819. Total energy = 1719.4957 kcal/mol (1710.8978 without restraints) Performing minimization step: 1820. Total energy = 1718.4348 kcal/mol (1709.8398 without restraints) Performing minimization step: 1821. Total energy = 1717.3756 kcal/mol (1708.7836 without restraints) Performing minimization step: 1822. Total energy = 1716.3182 kcal/mol (1707.7292 without restraints) Performing minimization step: 1823. Total energy = 1715.2629 kcal/mol (1706.6769 without restraints) Performing minimization step: 1824. Total energy = 1714.2091 kcal/mol (1705.6261 without restraints) Performing minimization step: 1825. Total energy = 1713.1571 kcal/mol (1704.5772 without restraints) Performing minimization step: 1826. Total energy = 1712.1068 kcal/mol (1703.5297 without restraints) Performing minimization step: 1827. Total energy = 1711.0583 kcal/mol (1702.4842 without restraints) Performing minimization step: 1828. Total energy = 1710.0116 kcal/mol (1701.4405 without restraints) Performing minimization step: 1829. Total energy = 1708.9667 kcal/mol (1700.3986 without restraints) Performing minimization step: 1830. Total energy = 1707.9236 kcal/mol (1699.3584 without restraints) Performing minimization step: 1831. Total energy = 1706.8822 kcal/mol (1698.3201 without restraints) Performing minimization step: 1832. Total energy = 1705.8428 kcal/mol (1697.2836 without restraints) Performing minimization step: 1833. Total energy = 1704.8049 kcal/mol (1696.2489 without restraints) Performing minimization step: 1834. Total energy = 1703.7690 kcal/mol (1695.2158 without restraints) Performing minimization step: 1835. Total energy = 1702.7349 kcal/mol (1694.1847 without restraints) Performing minimization step: 1836. Total energy = 1701.7023 kcal/mol (1693.1551 without restraints) Performing minimization step: 1837. Total energy = 1700.6716 kcal/mol (1692.1273 without restraints) Performing minimization step: 1838. Total energy = 1699.6423 kcal/mol (1691.1011 without restraints) Performing minimization step: 1839. Total energy = 1698.6150 kcal/mol (1690.0767 without restraints) Performing minimization step: 1840. Total energy = 1697.5894 kcal/mol (1689.0541 without restraints) Performing minimization step: 1841. Total energy = 1696.5655 kcal/mol (1688.0332 without restraints) Performing minimization step: 1842. Total energy = 1695.5434 kcal/mol (1687.0142 without restraints) Performing minimization step: 1843. Total energy = 1694.5231 kcal/mol (1685.9969 without restraints) Performing minimization step: 1844. Total energy = 1693.5044 kcal/mol (1684.9811 without restraints) Performing minimization step: 1845. Total energy = 1692.4873 kcal/mol (1683.9671 without restraints) Performing minimization step: 1846. Total energy = 1691.4722 kcal/mol (1682.9550 without restraints) Performing minimization step: 1847. Total energy = 1690.4589 kcal/mol (1681.9446 without restraints) Performing minimization step: 1848. Total energy = 1689.4472 kcal/mol (1680.9359 without restraints) Performing minimization step: 1849. Total energy = 1688.4373 kcal/mol (1679.9290 without restraints) Performing minimization step: 1850. Total energy = 1687.4291 kcal/mol (1678.9238 without restraints) Performing minimization step: 1851. Total energy = 1686.4222 kcal/mol (1677.9199 without restraints) Performing minimization step: 1852. Total energy = 1685.4175 kcal/mol (1676.9182 without restraints) Performing minimization step: 1853. Total energy = 1684.4142 kcal/mol (1675.9179 without restraints) Performing minimization step: 1854. Total energy = 1683.4133 kcal/mol (1674.9200 without restraints) Performing minimization step: 1855. Total energy = 1682.4139 kcal/mol (1673.9236 without restraints) Performing minimization step: 1856. Total energy = 1681.4160 kcal/mol (1672.9287 without restraints) Performing minimization step: 1857. Total energy = 1680.4197 kcal/mol (1671.9355 without restraints) Performing minimization step: 1858. Total energy = 1679.4252 kcal/mol (1670.9439 without restraints) Performing minimization step: 1859. Total energy = 1678.4325 kcal/mol (1669.9543 without restraints) Performing minimization step: 1860. Total energy = 1677.4413 kcal/mol (1668.9660 without restraints) Performing minimization step: 1861. Total energy = 1676.4521 kcal/mol (1667.9798 without restraints) Performing minimization step: 1862. Total energy = 1675.4646 kcal/mol (1666.9953 without restraints) Performing minimization step: 1863. Total energy = 1674.4785 kcal/mol (1666.0123 without restraints) Performing minimization step: 1864. Total energy = 1673.4940 kcal/mol (1665.0307 without restraints) Performing minimization step: 1865. Total energy = 1672.5113 kcal/mol (1664.0511 without restraints) Performing minimization step: 1866. Total energy = 1671.5303 kcal/mol (1663.0731 without restraints) Performing minimization step: 1867. Total energy = 1670.5510 kcal/mol (1662.0968 without restraints) Performing minimization step: 1868. Total energy = 1669.5735 kcal/mol (1661.1223 without restraints) Performing minimization step: 1869. Total energy = 1668.5975 kcal/mol (1660.1494 without restraints) Performing minimization step: 1870. Total energy = 1667.6233 kcal/mol (1659.1781 without restraints) Performing minimization step: 1871. Total energy = 1666.6505 kcal/mol (1658.2082 without restraints) Performing minimization step: 1872. Total energy = 1665.6795 kcal/mol (1657.2404 without restraints) Performing minimization step: 1873. Total energy = 1664.7102 kcal/mol (1656.2742 without restraints) Performing minimization step: 1874. Total energy = 1663.7426 kcal/mol (1655.3095 without restraints) Performing minimization step: 1875. Total energy = 1662.7767 kcal/mol (1654.3466 without restraints) Performing minimization step: 1876. Total energy = 1661.8123 kcal/mol (1653.3853 without restraints) Performing minimization step: 1877. Total energy = 1660.8496 kcal/mol (1652.4256 without restraints) Performing minimization step: 1878. Total energy = 1659.8886 kcal/mol (1651.4676 without restraints) Performing minimization step: 1879. Total energy = 1658.9293 kcal/mol (1650.5113 without restraints) Performing minimization step: 1880. Total energy = 1657.9716 kcal/mol (1649.5566 without restraints) Performing minimization step: 1881. Total energy = 1657.0155 kcal/mol (1648.6035 without restraints) Performing minimization step: 1882. Total energy = 1656.0611 kcal/mol (1647.6521 without restraints) Performing minimization step: 1883. Total energy = 1655.1082 kcal/mol (1646.7023 without restraints) Performing minimization step: 1884. Total energy = 1654.1571 kcal/mol (1645.7542 without restraints) Performing minimization step: 1885. Total energy = 1653.2076 kcal/mol (1644.8077 without restraints) Performing minimization step: 1886. Total energy = 1652.2597 kcal/mol (1643.8628 without restraints) Performing minimization step: 1887. Total energy = 1651.3134 kcal/mol (1642.9196 without restraints) Performing minimization step: 1888. Total energy = 1650.3688 kcal/mol (1641.9780 without restraints) Performing minimization step: 1889. Total energy = 1649.4258 kcal/mol (1641.0380 without restraints) Performing minimization step: 1890. Total energy = 1648.4844 kcal/mol (1640.0997 without restraints) Performing minimization step: 1891. Total energy = 1647.5447 kcal/mol (1639.1630 without restraints) Performing minimization step: 1892. Total energy = 1646.6066 kcal/mol (1638.2279 without restraints) Performing minimization step: 1893. Total energy = 1645.6701 kcal/mol (1637.2944 without restraints) Performing minimization step: 1894. Total energy = 1644.7352 kcal/mol (1636.3625 without restraints) Performing minimization step: 1895. Total energy = 1643.8017 kcal/mol (1635.4321 without restraints) Performing minimization step: 1896. Total energy = 1642.8700 kcal/mol (1634.5034 without restraints) Performing minimization step: 1897. Total energy = 1641.9400 kcal/mol (1633.5767 without restraints) Performing minimization step: 1898. Total energy = 1641.0117 kcal/mol (1632.6512 without restraints) Performing minimization step: 1899. Total energy = 1640.0848 kcal/mol (1631.7274 without restraints) Performing minimization step: 1900. Total energy = 1639.1595 kcal/mol (1630.8051 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/97a58f6c/tmp/complex_refx/complex_refx.pdb ...Done. Performing minimization step: 1901. Total energy = 1638.2361 kcal/mol (1629.8849 without restraints) Performing minimization step: 1902. Total energy = 1637.3142 kcal/mol (1628.9658 without restraints) Performing minimization step: 1903. Total energy = 1636.3938 kcal/mol (1628.0485 without restraints) Performing minimization step: 1904. Total energy = 1635.4749 kcal/mol (1627.1326 without restraints) Performing minimization step: 1905. Total energy = 1634.5575 kcal/mol (1626.2183 without restraints) Performing minimization step: 1906. Total energy = 1633.6417 kcal/mol (1625.3055 without restraints) Performing minimization step: 1907. Total energy = 1632.7276 kcal/mol (1624.3944 without restraints) Performing minimization step: 1908. Total energy = 1631.8150 kcal/mol (1623.4849 without restraints) Performing minimization step: 1909. Total energy = 1630.9039 kcal/mol (1622.5768 without restraints) Performing minimization step: 1910. Total energy = 1629.9947 kcal/mol (1621.6707 without restraints) Performing minimization step: 1911. Total energy = 1629.0869 kcal/mol (1620.7658 without restraints) Performing minimization step: 1912. Total energy = 1628.1805 kcal/mol (1619.8625 without restraints) Performing minimization step: 1913. Total energy = 1627.2758 kcal/mol (1618.9608 without restraints) Performing minimization step: 1914. Total energy = 1626.3724 kcal/mol (1618.0606 without restraints) Performing minimization step: 1915. Total energy = 1625.4708 kcal/mol (1617.1620 without restraints) Performing minimization step: 1916. Total energy = 1624.5708 kcal/mol (1616.2650 without restraints) Performing minimization step: 1917. Total energy = 1623.6723 kcal/mol (1615.3695 without restraints) Performing minimization step: 1918. Total energy = 1622.7753 kcal/mol (1614.4756 without restraints) Performing minimization step: 1919. Total energy = 1621.8799 kcal/mol (1613.5832 without restraints) Performing minimization step: 1920. Total energy = 1620.9862 kcal/mol (1612.6927 without restraints) Performing minimization step: 1921. Total energy = 1620.0940 kcal/mol (1611.8034 without restraints) Performing minimization step: 1922. Total energy = 1619.2032 kcal/mol (1610.9157 without restraints) Performing minimization step: 1923. Total energy = 1618.3137 kcal/mol (1610.0292 without restraints) Performing minimization step: 1924. Total energy = 1617.4261 kcal/mol (1609.1448 without restraints) Performing minimization step: 1925. Total energy = 1616.5399 kcal/mol (1608.2615 without restraints) Performing minimization step: 1926. Total energy = 1615.6553 kcal/mol (1607.3800 without restraints) Performing minimization step: 1927. Total energy = 1614.7724 kcal/mol (1606.5004 without restraints) Performing minimization step: 1928. Total energy = 1613.8909 kcal/mol (1605.6217 without restraints) Performing minimization step: 1929. Total energy = 1613.0107 kcal/mol (1604.7446 without restraints) Performing minimization step: 1930. Total energy = 1612.1323 kcal/mol (1603.8691 without restraints) Performing minimization step: 1931. Total energy = 1611.2556 kcal/mol (1602.9955 without restraints) Performing minimization step: 1932. Total energy = 1610.3801 kcal/mol (1602.1231 without restraints) Performing minimization step: 1933. Total energy = 1609.5062 kcal/mol (1601.2522 without restraints) Performing minimization step: 1934. Total energy = 1608.6337 kcal/mol (1600.3828 without restraints) Performing minimization step: 1935. Total energy = 1607.7628 kcal/mol (1599.5150 without restraints) Performing minimization step: 1936. Total energy = 1606.8936 kcal/mol (1598.6488 without restraints) Performing minimization step: 1937. Total energy = 1606.0257 kcal/mol (1597.7840 without restraints) Performing minimization step: 1938. Total energy = 1605.1594 kcal/mol (1596.9209 without restraints) Performing minimization step: 1939. Total energy = 1604.2946 kcal/mol (1596.0590 without restraints) Performing minimization step: 1940. Total energy = 1603.4313 kcal/mol (1595.1988 without restraints) Performing minimization step: 1941. Total energy = 1602.5695 kcal/mol (1594.3400 without restraints) Performing minimization step: 1942. Total energy = 1601.7093 kcal/mol (1593.4828 without restraints) Performing minimization step: 1943. Total energy = 1600.8504 kcal/mol (1592.6270 without restraints) Performing minimization step: 1944. Total energy = 1599.9930 kcal/mol (1591.7727 without restraints) Performing minimization step: 1945. Total energy = 1599.1374 kcal/mol (1590.9201 without restraints) Performing minimization step: 1946. Total energy = 1598.2828 kcal/mol (1590.0685 without restraints) Performing minimization step: 1947. Total energy = 1597.4300 kcal/mol (1589.2188 without restraints) Performing minimization step: 1948. Total energy = 1596.5786 kcal/mol (1588.3705 without restraints) Performing minimization step: 1949. Total energy = 1595.7286 kcal/mol (1587.5236 without restraints) Performing minimization step: 1950. Total energy = 1594.8801 kcal/mol (1586.6781 without restraints) Performing minimization step: 1951. Total energy = 1594.0331 kcal/mol (1585.8342 without restraints) Performing minimization step: 1952. Total energy = 1593.1879 kcal/mol (1584.9921 without restraints) Performing minimization step: 1953. Total energy = 1592.3439 kcal/mol (1584.1511 without restraints) Performing minimization step: 1954. Total energy = 1591.5013 kcal/mol (1583.3116 without restraints) Performing minimization step: 1955. Total energy = 1590.6601 kcal/mol (1582.4735 without restraints) Performing minimization step: 1956. Total energy = 1589.8204 kcal/mol (1581.6369 without restraints) Performing minimization step: 1957. Total energy = 1588.9820 kcal/mol (1580.8015 without restraints) Performing minimization step: 1958. Total energy = 1588.1453 kcal/mol (1579.9678 without restraints) Performing minimization step: 1959. Total energy = 1587.3100 kcal/mol (1579.1356 without restraints) Performing minimization step: 1960. Total energy = 1586.4764 kcal/mol (1578.3051 without restraints) Performing minimization step: 1961. Total energy = 1585.6441 kcal/mol (1577.4758 without restraints) Performing minimization step: 1962. Total energy = 1584.8131 kcal/mol (1576.6480 without restraints) Performing minimization step: 1963. Total energy = 1583.9837 kcal/mol (1575.8216 without restraints) Performing minimization step: 1964. Total energy = 1583.1559 kcal/mol (1574.9968 without restraints) Performing minimization step: 1965. Total energy = 1582.3293 kcal/mol (1574.1733 without restraints) Performing minimization step: 1966. Total energy = 1581.5040 kcal/mol (1573.3510 without restraints) Performing minimization step: 1967. Total energy = 1580.6802 kcal/mol (1572.5303 without restraints) Performing minimization step: 1968. Total energy = 1579.8579 kcal/mol (1571.7111 without restraints) Performing minimization step: 1969. Total energy = 1579.0371 kcal/mol (1570.8934 without restraints) Performing minimization step: 1970. Total energy = 1578.2176 kcal/mol (1570.0770 without restraints) Performing minimization step: 1971. Total energy = 1577.3997 kcal/mol (1569.2622 without restraints) Performing minimization step: 1972. Total energy = 1576.5832 kcal/mol (1568.4488 without restraints) Performing minimization step: 1973. Total energy = 1575.7685 kcal/mol (1567.6371 without restraints) Performing minimization step: 1974. Total energy = 1574.9548 kcal/mol (1566.8265 without restraints) Performing minimization step: 1975. Total energy = 1574.1425 kcal/mol (1566.0173 without restraints) Performing minimization step: 1976. Total energy = 1573.3317 kcal/mol (1565.2095 without restraints) Performing minimization step: 1977. Total energy = 1572.5222 kcal/mol (1564.4031 without restraints) Performing minimization step: 1978. Total energy = 1571.7139 kcal/mol (1563.5979 without restraints) Performing minimization step: 1979. Total energy = 1570.9073 kcal/mol (1562.7943 without restraints) Performing minimization step: 1980. Total energy = 1570.1021 kcal/mol (1561.9922 without restraints) Performing minimization step: 1981. Total energy = 1569.2982 kcal/mol (1561.1915 without restraints) Performing minimization step: 1982. Total energy = 1568.4958 kcal/mol (1560.3921 without restraints) Performing minimization step: 1983. Total energy = 1567.6949 kcal/mol (1559.5943 without restraints) Performing minimization step: 1984. Total energy = 1566.8952 kcal/mol (1558.7977 without restraints) Performing minimization step: 1985. Total energy = 1566.0970 kcal/mol (1558.0025 without restraints) Performing minimization step: 1986. Total energy = 1565.2995 kcal/mol (1557.2080 without restraints) Performing minimization step: 1987. Total energy = 1564.5041 kcal/mol (1556.4159 without restraints) Performing minimization step: 1988. Total energy = 1563.7107 kcal/mol (1555.6255 without restraints) Performing minimization step: 1989. Total energy = 1562.9182 kcal/mol (1554.8360 without restraints) Performing minimization step: 1990. Total energy = 1562.1271 kcal/mol (1554.0481 without restraints) Performing minimization step: 1991. Total energy = 1561.3372 kcal/mol (1553.2612 without restraints) Performing minimization step: 1992. Total energy = 1560.5487 kcal/mol (1552.4758 without restraints) Performing minimization step: 1993. Total energy = 1559.7616 kcal/mol (1551.6918 without restraints) Performing minimization step: 1994. Total energy = 1558.9762 kcal/mol (1550.9096 without restraints) Performing minimization step: 1995. Total energy = 1558.1920 kcal/mol (1550.1283 without restraints) Performing minimization step: 1996. Total energy = 1557.4091 kcal/mol (1549.3486 without restraints) Performing minimization step: 1997. Total energy = 1556.6276 kcal/mol (1548.5701 without restraints) Performing minimization step: 1998. Total energy = 1555.8475 kcal/mol (1547.7931 without restraints) Performing minimization step: 1999. Total energy = 1555.0686 kcal/mol (1547.0173 without restraints) Performing minimization step: 2000. Total energy = 1554.2913 kcal/mol (1546.2431 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/97a58f6c/tmp/complex_refx/complex_refx.pdb ...Done. Performing minimization step: 2001. Total energy = 1553.5151 kcal/mol (1545.4700 without restraints) Performing minimization step: 2002. Total energy = 1552.7404 kcal/mol (1544.6983 without restraints) Performing minimization step: 2003. Total energy = 1551.9669 kcal/mol (1543.9279 without restraints) Performing minimization step: 2004. Total energy = 1551.1948 kcal/mol (1543.1589 without restraints) Performing minimization step: 2005. Total energy = 1550.4240 kcal/mol (1542.3911 without restraints) Performing minimization step: 2006. Total energy = 1549.6547 kcal/mol (1541.6250 without restraints) Performing minimization step: 2007. Total energy = 1548.8867 kcal/mol (1540.8601 without restraints) Performing minimization step: 2008. Total energy = 1548.1200 kcal/mol (1540.0965 without restraints) Performing minimization step: 2009. Total energy = 1547.3545 kcal/mol (1539.3340 without restraints) Performing minimization step: 2010. Total energy = 1546.5905 kcal/mol (1538.5731 without restraints) Performing minimization step: 2011. Total energy = 1545.8280 kcal/mol (1537.8137 without restraints) Performing minimization step: 2012. Total energy = 1545.0667 kcal/mol (1537.0555 without restraints) Performing minimization step: 2013. Total energy = 1544.3067 kcal/mol (1536.2986 without restraints) Performing minimization step: 2014. Total energy = 1543.5480 kcal/mol (1535.5430 without restraints) Performing minimization step: 2015. Total energy = 1542.7906 kcal/mol (1534.7888 without restraints) Performing minimization step: 2016. Total energy = 1542.0348 kcal/mol (1534.0359 without restraints) Performing minimization step: 2017. Total energy = 1541.2801 kcal/mol (1533.2844 without restraints) Performing minimization step: 2018. Total energy = 1540.5269 kcal/mol (1532.5343 without restraints) Performing minimization step: 2019. Total energy = 1539.7749 kcal/mol (1531.7854 without restraints) Performing minimization step: 2020. Total energy = 1539.0242 kcal/mol (1531.0377 without restraints) Performing minimization step: 2021. Total energy = 1538.2748 kcal/mol (1530.2914 without restraints) Performing minimization step: 2022. Total energy = 1537.5263 kcal/mol (1529.5461 without restraints) Performing minimization step: 2023. Total energy = 1536.7797 kcal/mol (1528.8026 without restraints) Performing minimization step: 2024. Total energy = 1536.0344 kcal/mol (1528.0603 without restraints) Performing minimization step: 2025. Total energy = 1535.2902 kcal/mol (1527.3192 without restraints) Performing minimization step: 2026. Total energy = 1534.5474 kcal/mol (1526.5795 without restraints) Performing minimization step: 2027. Total energy = 1533.8058 kcal/mol (1525.8410 without restraints) Performing minimization step: 2028. Total energy = 1533.0657 kcal/mol (1525.1040 without restraints) Performing minimization step: 2029. Total energy = 1532.3267 kcal/mol (1524.3681 without restraints) Performing minimization step: 2030. Total energy = 1531.5891 kcal/mol (1523.6337 without restraints) Performing minimization step: 2031. Total energy = 1530.8530 kcal/mol (1522.9006 without restraints) Performing minimization step: 2032. Total energy = 1530.1178 kcal/mol (1522.1685 without restraints) Performing minimization step: 2033. Total energy = 1529.3841 kcal/mol (1521.4378 without restraints) Performing minimization step: 2034. Total energy = 1528.6516 kcal/mol (1520.7085 without restraints) Performing minimization step: 2035. Total energy = 1527.9204 kcal/mol (1519.9804 without restraints) Performing minimization step: 2036. Total energy = 1527.1908 kcal/mol (1519.2538 without restraints) Performing minimization step: 2037. Total energy = 1526.4622 kcal/mol (1518.5283 without restraints) Performing minimization step: 2038. Total energy = 1525.7348 kcal/mol (1517.8041 without restraints) Performing minimization step: 2039. Total energy = 1525.0090 kcal/mol (1517.0814 without restraints) Performing minimization step: 2040. Total energy = 1524.2843 kcal/mol (1516.3597 without restraints) Performing minimization step: 2041. Total energy = 1523.5608 kcal/mol (1515.6393 without restraints) Performing minimization step: 2042. Total energy = 1522.8386 kcal/mol (1514.9202 without restraints) Performing minimization step: 2043. Total energy = 1522.1178 kcal/mol (1514.2026 without restraints) Performing minimization step: 2044. Total energy = 1521.3978 kcal/mol (1513.4857 without restraints) Performing minimization step: 2045. Total energy = 1520.6796 kcal/mol (1512.7706 without restraints) Performing minimization step: 2046. Total energy = 1519.9625 kcal/mol (1512.0565 without restraints) Performing minimization step: 2047. Total energy = 1519.2462 kcal/mol (1511.3433 without restraints) Performing minimization step: 2048. Total energy = 1518.5314 kcal/mol (1510.6317 without restraints) Performing minimization step: 2049. Total energy = 1517.8180 kcal/mol (1509.9214 without restraints) Performing minimization step: 2050. Total energy = 1517.1059 kcal/mol (1509.2124 without restraints) Performing minimization step: 2051. Total energy = 1516.3950 kcal/mol (1508.5045 without restraints) Performing minimization step: 2052. Total energy = 1515.6851 kcal/mol (1507.7978 without restraints) Performing minimization step: 2053. Total energy = 1514.9767 kcal/mol (1507.0925 without restraints) Performing minimization step: 2054. Total energy = 1514.2696 kcal/mol (1506.3884 without restraints) Performing minimization step: 2055. Total energy = 1513.5637 kcal/mol (1505.6856 without restraints) Performing minimization step: 2056. Total energy = 1512.8590 kcal/mol (1504.9841 without restraints) Performing minimization step: 2057. Total energy = 1512.1559 kcal/mol (1504.2840 without restraints) Performing minimization step: 2058. Total energy = 1511.4537 kcal/mol (1503.5850 without restraints) Performing minimization step: 2059. Total energy = 1510.7526 kcal/mol (1502.8869 without restraints) Performing minimization step: 2060. Total energy = 1510.0528 kcal/mol (1502.1901 without restraints) Performing minimization step: 2061. Total energy = 1509.3542 kcal/mol (1501.4948 without restraints) Performing minimization step: 2062. Total energy = 1508.6570 kcal/mol (1500.8007 without restraints) Performing minimization step: 2063. Total energy = 1507.9612 kcal/mol (1500.1080 without restraints) Performing minimization step: 2064. Total energy = 1507.2665 kcal/mol (1499.4163 without restraints) Performing minimization step: 2065. Total energy = 1506.5729 kcal/mol (1498.7259 without restraints) Performing minimization step: 2066. Total energy = 1505.8805 kcal/mol (1498.0366 without restraints) Performing minimization step: 2067. Total energy = 1505.1895 kcal/mol (1497.3487 without restraints) Performing minimization step: 2068. Total energy = 1504.4996 kcal/mol (1496.6619 without restraints) Performing minimization step: 2069. Total energy = 1503.8109 kcal/mol (1495.9763 without restraints) Performing minimization step: 2070. Total energy = 1503.1234 kcal/mol (1495.2919 without restraints) Performing minimization step: 2071. Total energy = 1502.4372 kcal/mol (1494.6088 without restraints) Performing minimization step: 2072. Total energy = 1501.7522 kcal/mol (1493.9270 without restraints) Performing minimization step: 2073. Total energy = 1501.0684 kcal/mol (1493.2463 without restraints) Performing minimization step: 2074. Total energy = 1500.3860 kcal/mol (1492.5669 without restraints) Performing minimization step: 2075. Total energy = 1499.7043 kcal/mol (1491.8883 without restraints) Performing minimization step: 2076. Total energy = 1499.0239 kcal/mol (1491.2110 without restraints) Performing minimization step: 2077. Total energy = 1498.3448 kcal/mol (1490.5350 without restraints) Performing minimization step: 2078. Total energy = 1497.6669 kcal/mol (1489.8602 without restraints) Performing minimization step: 2079. Total energy = 1496.9902 kcal/mol (1489.1866 without restraints) Performing minimization step: 2080. Total energy = 1496.3147 kcal/mol (1488.5142 without restraints) Performing minimization step: 2081. Total energy = 1495.6406 kcal/mol (1487.8433 without restraints) Performing minimization step: 2082. Total energy = 1494.9675 kcal/mol (1487.1733 without restraints) Performing minimization step: 2083. Total energy = 1494.2956 kcal/mol (1486.5045 without restraints) Performing minimization step: 2084. Total energy = 1493.6247 kcal/mol (1485.8367 without restraints) Performing minimization step: 2085. Total energy = 1492.9551 kcal/mol (1485.1702 without restraints) Performing minimization step: 2086. Total energy = 1492.2869 kcal/mol (1484.5051 without restraints) Performing minimization step: 2087. Total energy = 1491.6198 kcal/mol (1483.8411 without restraints) Performing minimization step: 2088. Total energy = 1490.9538 kcal/mol (1483.1782 without restraints) Performing minimization step: 2089. Total energy = 1490.2890 kcal/mol (1482.5165 without restraints) Performing minimization step: 2090. Total energy = 1489.6249 kcal/mol (1481.8555 without restraints) Performing minimization step: 2091. Total energy = 1488.9624 kcal/mol (1481.1961 without restraints) Performing minimization step: 2092. Total energy = 1488.3012 kcal/mol (1480.5381 without restraints) Performing minimization step: 2093. Total energy = 1487.6411 kcal/mol (1479.8810 without restraints) Performing minimization step: 2094. Total energy = 1486.9819 kcal/mol (1479.2249 without restraints) Performing minimization step: 2095. Total energy = 1486.3239 kcal/mol (1478.5699 without restraints) Performing minimization step: 2096. Total energy = 1485.6671 kcal/mol (1477.9163 without restraints) Performing minimization step: 2097. Total energy = 1485.0114 kcal/mol (1477.2637 without restraints) Performing minimization step: 2098. Total energy = 1484.3569 kcal/mol (1476.6124 without restraints) Performing minimization step: 2099. Total energy = 1483.7036 kcal/mol (1475.9622 without restraints) Performing minimization step: 2100. Total energy = 1483.0516 kcal/mol (1475.3133 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/97a58f6c/tmp/complex_refx/complex_refx.pdb ...Done. Performing minimization step: 2101. Total energy = 1482.4006 kcal/mol (1474.6654 without restraints) Performing minimization step: 2102. Total energy = 1481.7508 kcal/mol (1474.0187 without restraints) Performing minimization step: 2103. Total energy = 1481.1021 kcal/mol (1473.3731 without restraints) Performing minimization step: 2104. Total energy = 1480.4548 kcal/mol (1472.7289 without restraints) Performing minimization step: 2105. Total energy = 1479.8084 kcal/mol (1472.0857 without restraints) Performing minimization step: 2106. Total energy = 1479.1632 kcal/mol (1471.4435 without restraints) Performing minimization step: 2107. Total energy = 1478.5191 kcal/mol (1470.8026 without restraints) Performing minimization step: 2108. Total energy = 1477.8762 kcal/mol (1470.1628 without restraints) Performing minimization step: 2109. Total energy = 1477.2345 kcal/mol (1469.5242 without restraints) Performing minimization step: 2110. Total energy = 1476.5938 kcal/mol (1468.8866 without restraints) Performing minimization step: 2111. Total energy = 1475.9542 kcal/mol (1468.2501 without restraints) Performing minimization step: 2112. Total energy = 1475.3158 kcal/mol (1467.6148 without restraints) Performing minimization step: 2113. Total energy = 1474.6784 kcal/mol (1466.9806 without restraints) Performing minimization step: 2114. Total energy = 1474.0422 kcal/mol (1466.3475 without restraints) Performing minimization step: 2115. Total energy = 1473.4073 kcal/mol (1465.7157 without restraints) Performing minimization step: 2116. Total energy = 1472.7734 kcal/mol (1465.0849 without restraints) Performing minimization step: 2117. Total energy = 1472.1404 kcal/mol (1464.4550 without restraints) Performing minimization step: 2118. Total energy = 1471.5086 kcal/mol (1463.8263 without restraints) Performing minimization step: 2119. Total energy = 1470.8780 kcal/mol (1463.1987 without restraints) Performing minimization step: 2120. Total energy = 1470.2485 kcal/mol (1462.5723 without restraints) Performing minimization step: 2121. Total energy = 1469.6201 kcal/mol (1461.9471 without restraints) Performing minimization step: 2122. Total energy = 1468.9926 kcal/mol (1461.3228 without restraints) Performing minimization step: 2123. Total energy = 1468.3665 kcal/mol (1460.6998 without restraints) Performing minimization step: 2124. Total energy = 1467.7416 kcal/mol (1460.0779 without restraints) Performing minimization step: 2125. Total energy = 1467.1176 kcal/mol (1459.4571 without restraints) Performing minimization step: 2126. Total energy = 1466.4948 kcal/mol (1458.8373 without restraints) Performing minimization step: 2127. Total energy = 1465.8729 kcal/mol (1458.2186 without restraints) Performing minimization step: 2128. Total energy = 1465.2522 kcal/mol (1457.6010 without restraints) Performing minimization step: 2129. Total energy = 1464.6326 kcal/mol (1456.9845 without restraints) Performing minimization step: 2130. Total energy = 1464.0141 kcal/mol (1456.3690 without restraints) Performing minimization step: 2131. Total energy = 1463.3966 kcal/mol (1455.7547 without restraints) Performing minimization step: 2132. Total energy = 1462.7803 kcal/mol (1455.1415 without restraints) Performing minimization step: 2133. Total energy = 1462.1651 kcal/mol (1454.5294 without restraints) Performing minimization step: 2134. Total energy = 1461.5508 kcal/mol (1453.9182 without restraints) Performing minimization step: 2135. Total energy = 1460.9377 kcal/mol (1453.3082 without restraints) Performing minimization step: 2136. Total energy = 1460.3257 kcal/mol (1452.6993 without restraints) Performing minimization step: 2137. Total energy = 1459.7149 kcal/mol (1452.0917 without restraints) Performing minimization step: 2138. Total energy = 1459.1048 kcal/mol (1451.4846 without restraints) Performing minimization step: 2139. Total energy = 1458.4962 kcal/mol (1450.8792 without restraints) Performing minimization step: 2140. Total energy = 1457.8882 kcal/mol (1450.2741 without restraints) Performing minimization step: 2141. Total energy = 1457.2816 kcal/mol (1449.6708 without restraints) Performing minimization step: 2142. Total energy = 1456.6764 kcal/mol (1449.0687 without restraints) Performing minimization step: 2143. Total energy = 1456.0719 kcal/mol (1448.4673 without restraints) Performing minimization step: 2144. Total energy = 1455.4685 kcal/mol (1447.8670 without restraints) Performing minimization step: 2145. Total energy = 1454.8661 kcal/mol (1447.2677 without restraints) Performing minimization step: 2146. Total energy = 1454.2643 kcal/mol (1446.6690 without restraints) Performing minimization step: 2147. Total energy = 1453.6641 kcal/mol (1446.0720 without restraints) Performing minimization step: 2148. Total energy = 1453.0646 kcal/mol (1445.4755 without restraints) Performing minimization step: 2149. Total energy = 1452.4664 kcal/mol (1444.8804 without restraints) Performing minimization step: 2150. Total energy = 1451.8691 kcal/mol (1444.2862 without restraints) Performing minimization step: 2151. Total energy = 1451.2731 kcal/mol (1443.6934 without restraints) Performing minimization step: 2152. Total energy = 1450.6784 kcal/mol (1443.1017 without restraints) Performing minimization step: 2153. Total energy = 1450.0843 kcal/mol (1442.5108 without restraints) Performing minimization step: 2154. Total energy = 1449.4918 kcal/mol (1441.9214 without restraints) Performing minimization step: 2155. Total energy = 1448.8999 kcal/mol (1441.3326 without restraints) Performing minimization step: 2156. Total energy = 1448.3090 kcal/mol (1440.7449 without restraints) Performing minimization step: 2157. Total energy = 1447.7197 kcal/mol (1440.1586 without restraints) Performing minimization step: 2158. Total energy = 1447.1309 kcal/mol (1439.5729 without restraints) Performing minimization step: 2159. Total energy = 1446.5432 kcal/mol (1438.9883 without restraints) Performing minimization step: 2160. Total energy = 1445.9564 kcal/mol (1438.4047 without restraints) Performing minimization step: 2161. Total energy = 1445.3707 kcal/mol (1437.8221 without restraints) Performing minimization step: 2162. Total energy = 1444.7860 kcal/mol (1437.2405 without restraints) Performing minimization step: 2163. Total energy = 1444.2024 kcal/mol (1436.6600 without restraints) Performing minimization step: 2164. Total energy = 1443.6200 kcal/mol (1436.0809 without restraints) Performing minimization step: 2165. Total energy = 1443.0382 kcal/mol (1435.5020 without restraints) Performing minimization step: 2166. Total energy = 1442.4576 kcal/mol (1434.9245 without restraints) Performing minimization step: 2167. Total energy = 1441.8780 kcal/mol (1434.3479 without restraints) Performing minimization step: 2168. Total energy = 1441.2991 kcal/mol (1433.7721 without restraints) Performing minimization step: 2169. Total energy = 1440.7215 kcal/mol (1433.1977 without restraints) Performing minimization step: 2170. Total energy = 1440.1450 kcal/mol (1432.6243 without restraints) Performing minimization step: 2171. Total energy = 1439.5693 kcal/mol (1432.0517 without restraints) Performing minimization step: 2172. Total energy = 1438.9948 kcal/mol (1431.4804 without restraints) Performing minimization step: 2173. Total energy = 1438.4212 kcal/mol (1430.9098 without restraints) Performing minimization step: 2174. Total energy = 1437.8488 kcal/mol (1430.3405 without restraints) Performing minimization step: 2175. Total energy = 1437.2767 kcal/mol (1429.7716 without restraints) Performing minimization step: 2176. Total energy = 1436.7062 kcal/mol (1429.2042 without restraints) Performing minimization step: 2177. Total energy = 1436.1368 kcal/mol (1428.6378 without restraints) Performing minimization step: 2178. Total energy = 1435.5683 kcal/mol (1428.0725 without restraints) Performing minimization step: 2179. Total energy = 1435.0008 kcal/mol (1427.5081 without restraints) Performing minimization step: 2180. Total energy = 1434.4343 kcal/mol (1426.9447 without restraints) Performing minimization step: 2181. Total energy = 1433.8688 kcal/mol (1426.3823 without restraints) Performing minimization step: 2182. Total energy = 1433.3043 kcal/mol (1425.8209 without restraints) Performing minimization step: 2183. Total energy = 1432.7409 kcal/mol (1425.2605 without restraints) Performing minimization step: 2184. Total energy = 1432.1787 kcal/mol (1424.7015 without restraints) Performing minimization step: 2185. Total energy = 1431.6172 kcal/mol (1424.1431 without restraints) Performing minimization step: 2186. Total energy = 1431.0567 kcal/mol (1423.5857 without restraints) Performing minimization step: 2187. Total energy = 1430.4971 kcal/mol (1423.0292 without restraints) Performing minimization step: 2188. Total energy = 1429.9385 kcal/mol (1422.4737 without restraints) Performing minimization step: 2189. Total energy = 1429.3809 kcal/mol (1421.9192 without restraints) Performing minimization step: 2190. Total energy = 1428.8242 kcal/mol (1421.3657 without restraints) Performing minimization step: 2191. Total energy = 1428.2686 kcal/mol (1420.8131 without restraints) Performing minimization step: 2192. Total energy = 1427.7139 kcal/mol (1420.2615 without restraints) Performing minimization step: 2193. Total energy = 1427.1600 kcal/mol (1419.7107 without restraints) Performing minimization step: 2194. Total energy = 1426.6076 kcal/mol (1419.1615 without restraints) Performing minimization step: 2195. Total energy = 1426.0558 kcal/mol (1418.6128 without restraints) Performing minimization step: 2196. Total energy = 1425.5052 kcal/mol (1418.0653 without restraints) Performing minimization step: 2197. Total energy = 1424.9554 kcal/mol (1417.5185 without restraints) Performing minimization step: 2198. Total energy = 1424.4065 kcal/mol (1416.9727 without restraints) Performing minimization step: 2199. Total energy = 1423.8586 kcal/mol (1416.4279 without restraints) Performing minimization step: 2200. Total energy = 1423.3116 kcal/mol (1415.8840 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/97a58f6c/tmp/complex_refx/complex_refx.pdb ...Done. Performing minimization step: 2201. Total energy = 1422.7657 kcal/mol (1415.3413 without restraints) Performing minimization step: 2202. Total energy = 1422.2205 kcal/mol (1414.7991 without restraints) Performing minimization step: 2203. Total energy = 1421.6764 kcal/mol (1414.2581 without restraints) Performing minimization step: 2204. Total energy = 1421.1333 kcal/mol (1413.7183 without restraints) Performing minimization step: 2205. Total energy = 1420.5912 kcal/mol (1413.1791 without restraints) Performing minimization step: 2206. Total energy = 1420.0501 kcal/mol (1412.6412 without restraints) Performing minimization step: 2207. Total energy = 1419.5101 kcal/mol (1412.1041 without restraints) Performing minimization step: 2208. Total energy = 1418.9706 kcal/mol (1411.5678 without restraints) Performing minimization step: 2209. Total energy = 1418.4321 kcal/mol (1411.0324 without restraints) Performing minimization step: 2210. Total energy = 1417.8946 kcal/mol (1410.4980 without restraints) Performing minimization step: 2211. Total energy = 1417.3581 kcal/mol (1409.9646 without restraints) Performing minimization step: 2212. Total energy = 1416.8226 kcal/mol (1409.4323 without restraints) Performing minimization step: 2213. Total energy = 1416.2879 kcal/mol (1408.9007 without restraints) Performing minimization step: 2214. Total energy = 1415.7543 kcal/mol (1408.3701 without restraints) Performing minimization step: 2215. Total energy = 1415.2214 kcal/mol (1407.8404 without restraints) Performing minimization step: 2216. Total energy = 1414.6896 kcal/mol (1407.3116 without restraints) Performing minimization step: 2217. Total energy = 1414.1586 kcal/mol (1406.7837 without restraints) Performing minimization step: 2218. Total energy = 1413.6288 kcal/mol (1406.2571 without restraints) Performing minimization step: 2219. Total energy = 1413.0999 kcal/mol (1405.7312 without restraints) Performing minimization step: 2220. Total energy = 1412.5719 kcal/mol (1405.2063 without restraints) Performing minimization step: 2221. Total energy = 1412.0449 kcal/mol (1404.6824 without restraints) Performing minimization step: 2222. Total energy = 1411.5183 kcal/mol (1404.1589 without restraints) Performing minimization step: 2223. Total energy = 1410.9931 kcal/mol (1403.6368 without restraints) Performing minimization step: 2224. Total energy = 1410.4686 kcal/mol (1403.1153 without restraints) Performing minimization step: 2225. Total energy = 1409.9449 kcal/mol (1402.5947 without restraints) Performing minimization step: 2226. Total energy = 1409.4222 kcal/mol (1402.0751 without restraints) Performing minimization step: 2227. Total energy = 1408.9005 kcal/mol (1401.5568 without restraints) Performing minimization step: 2228. Total energy = 1408.3798 kcal/mol (1401.0390 without restraints) Performing minimization step: 2229. Total energy = 1407.8598 kcal/mol (1400.5221 without restraints) Performing minimization step: 2230. Total energy = 1407.3407 kcal/mol (1400.0061 without restraints) Performing minimization step: 2231. Total energy = 1406.8226 kcal/mol (1399.4910 without restraints) Performing minimization step: 2232. Total energy = 1406.3053 kcal/mol (1398.9768 without restraints) Performing minimization step: 2233. Total energy = 1405.7889 kcal/mol (1398.4635 without restraints) Performing minimization step: 2234. Total energy = 1405.2735 kcal/mol (1397.9512 without restraints) Performing minimization step: 2235. Total energy = 1404.7589 kcal/mol (1397.4397 without restraints) Performing minimization step: 2236. Total energy = 1404.2452 kcal/mol (1396.9291 without restraints) Performing minimization step: 2237. Total energy = 1403.7325 kcal/mol (1396.4195 without restraints) Performing minimization step: 2238. Total energy = 1403.2206 kcal/mol (1395.9106 without restraints) Performing minimization step: 2239. Total energy = 1402.7095 kcal/mol (1395.4027 without restraints) Performing minimization step: 2240. Total energy = 1402.1994 kcal/mol (1394.8956 without restraints) Performing minimization step: 2241. Total energy = 1401.6901 kcal/mol (1394.3894 without restraints) Performing minimization step: 2242. Total energy = 1401.1819 kcal/mol (1393.8844 without restraints) Performing minimization step: 2243. Total energy = 1400.6744 kcal/mol (1393.3798 without restraints) Performing minimization step: 2244. Total energy = 1400.1672 kcal/mol (1392.8758 without restraints) Performing minimization step: 2245. Total energy = 1399.6615 kcal/mol (1392.3734 without restraints) Performing minimization step: 2246. Total energy = 1399.1568 kcal/mol (1391.8716 without restraints) Performing minimization step: 2247. Total energy = 1398.6528 kcal/mol (1391.3707 without restraints) Performing minimization step: 2248. Total energy = 1398.1499 kcal/mol (1390.8708 without restraints) Performing minimization step: 2249. Total energy = 1397.6474 kcal/mol (1390.3715 without restraints) Performing minimization step: 2250. Total energy = 1397.1459 kcal/mol (1389.8728 without restraints) Performing minimization step: 2251. Total energy = 1396.6452 kcal/mol (1389.3754 without restraints) Performing minimization step: 2252. Total energy = 1396.1455 kcal/mol (1388.8789 without restraints) Performing minimization step: 2253. Total energy = 1395.6469 kcal/mol (1388.3834 without restraints) Performing minimization step: 2254. Total energy = 1395.1487 kcal/mol (1387.8882 without restraints) Performing minimization step: 2255. Total energy = 1394.6516 kcal/mol (1387.3942 without restraints) Performing minimization step: 2256. Total energy = 1394.1554 kcal/mol (1386.9011 without restraints) Performing minimization step: 2257. Total energy = 1393.6599 kcal/mol (1386.4087 without restraints) Performing minimization step: 2258. Total energy = 1393.1655 kcal/mol (1385.9173 without restraints) Performing minimization step: 2259. Total energy = 1392.6718 kcal/mol (1385.4268 without restraints) Performing minimization step: 2260. Total energy = 1392.1791 kcal/mol (1384.9371 without restraints) Performing minimization step: 2261. Total energy = 1391.6873 kcal/mol (1384.4483 without restraints) Performing minimization step: 2262. Total energy = 1391.1961 kcal/mol (1383.9603 without restraints) Performing minimization step: 2263. Total energy = 1390.7059 kcal/mol (1383.4731 without restraints) Performing minimization step: 2264. Total energy = 1390.2167 kcal/mol (1382.9871 without restraints) Performing minimization step: 2265. Total energy = 1389.7282 kcal/mol (1382.5016 without restraints) Performing minimization step: 2266. Total energy = 1389.2406 kcal/mol (1382.0171 without restraints) Performing minimization step: 2267. Total energy = 1388.7537 kcal/mol (1381.5333 without restraints) Performing minimization step: 2268. Total energy = 1388.2676 kcal/mol (1381.0502 without restraints) Performing minimization step: 2269. Total energy = 1387.7826 kcal/mol (1380.5683 without restraints) Performing minimization step: 2270. Total energy = 1387.2983 kcal/mol (1380.0871 without restraints) Performing minimization step: 2271. Total energy = 1386.8147 kcal/mol (1379.6065 without restraints) Performing minimization step: 2272. Total energy = 1386.3320 kcal/mol (1379.1270 without restraints) Performing minimization step: 2273. Total energy = 1385.8502 kcal/mol (1378.6483 without restraints) Performing minimization step: 2274. Total energy = 1385.3693 kcal/mol (1378.1704 without restraints) Performing minimization step: 2275. Total energy = 1384.8892 kcal/mol (1377.6934 without restraints) Performing minimization step: 2276. Total energy = 1384.4100 kcal/mol (1377.2173 without restraints) Performing minimization step: 2277. Total energy = 1383.9315 kcal/mol (1376.7417 without restraints) Performing minimization step: 2278. Total energy = 1383.4537 kcal/mol (1376.2671 without restraints) Performing minimization step: 2279. Total energy = 1382.9768 kcal/mol (1375.7933 without restraints) Performing minimization step: 2280. Total energy = 1382.5005 kcal/mol (1375.3200 without restraints) Performing minimization step: 2281. Total energy = 1382.0251 kcal/mol (1374.8477 without restraints) Performing minimization step: 2282. Total energy = 1381.5509 kcal/mol (1374.3766 without restraints) Performing minimization step: 2283. Total energy = 1381.0771 kcal/mol (1373.9059 without restraints) Performing minimization step: 2284. Total energy = 1380.6046 kcal/mol (1373.4365 without restraints) Performing minimization step: 2285. Total energy = 1380.1325 kcal/mol (1372.9673 without restraints) Performing minimization step: 2286. Total energy = 1379.6612 kcal/mol (1372.4992 without restraints) Performing minimization step: 2287. Total energy = 1379.1907 kcal/mol (1372.0318 without restraints) Performing minimization step: 2288. Total energy = 1378.7211 kcal/mol (1371.5652 without restraints) Performing minimization step: 2289. Total energy = 1378.2524 kcal/mol (1371.0996 without restraints) Performing minimization step: 2290. Total energy = 1377.7845 kcal/mol (1370.6348 without restraints) Performing minimization step: 2291. Total energy = 1377.3174 kcal/mol (1370.1708 without restraints) Performing minimization step: 2292. Total energy = 1376.8509 kcal/mol (1369.7072 without restraints) Performing minimization step: 2293. Total energy = 1376.3853 kcal/mol (1369.2448 without restraints) Performing minimization step: 2294. Total energy = 1375.9208 kcal/mol (1368.7834 without restraints) Performing minimization step: 2295. Total energy = 1375.4567 kcal/mol (1368.3224 without restraints) Performing minimization step: 2296. Total energy = 1374.9937 kcal/mol (1367.8625 without restraints) Performing minimization step: 2297. Total energy = 1374.5317 kcal/mol (1367.4035 without restraints) Performing minimization step: 2298. Total energy = 1374.0702 kcal/mol (1366.9451 without restraints) Performing minimization step: 2299. Total energy = 1373.6095 kcal/mol (1366.4874 without restraints) Performing minimization step: 2300. Total energy = 1373.1496 kcal/mol (1366.0305 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/97a58f6c/tmp/complex_refx/complex_refx.pdb ...Done. Performing minimization step: 2301. Total energy = 1372.6904 kcal/mol (1365.5745 without restraints) Performing minimization step: 2302. Total energy = 1372.2325 kcal/mol (1365.1196 without restraints) Performing minimization step: 2303. Total energy = 1371.7749 kcal/mol (1364.6651 without restraints) Performing minimization step: 2304. Total energy = 1371.3184 kcal/mol (1364.2116 without restraints) Performing minimization step: 2305. Total energy = 1370.8624 kcal/mol (1363.7587 without restraints) Performing minimization step: 2306. Total energy = 1370.4074 kcal/mol (1363.3067 without restraints) Performing minimization step: 2307. Total energy = 1369.9531 kcal/mol (1362.8556 without restraints) Performing minimization step: 2308. Total energy = 1369.4988 kcal/mol (1362.4043 without restraints) Performing minimization step: 2309. Total energy = 1369.0460 kcal/mol (1361.9545 without restraints) Performing minimization step: 2310. Total energy = 1368.5941 kcal/mol (1361.5057 without restraints) Performing minimization step: 2311. Total energy = 1368.1428 kcal/mol (1361.0575 without restraints) Performing minimization step: 2312. Total energy = 1367.6924 kcal/mol (1360.6102 without restraints) Performing minimization step: 2313. Total energy = 1367.2430 kcal/mol (1360.1638 without restraints) Performing minimization step: 2314. Total energy = 1366.7940 kcal/mol (1359.7178 without restraints) Performing minimization step: 2315. Total energy = 1366.3459 kcal/mol (1359.2728 without restraints) Performing minimization step: 2316. Total energy = 1365.8985 kcal/mol (1358.8284 without restraints) Performing minimization step: 2317. Total energy = 1365.4518 kcal/mol (1358.3848 without restraints) Performing minimization step: 2318. Total energy = 1365.0058 kcal/mol (1357.9419 without restraints) Performing minimization step: 2319. Total energy = 1364.5611 kcal/mol (1357.5002 without restraints) Performing minimization step: 2320. Total energy = 1364.1166 kcal/mol (1357.0586 without restraints) Performing minimization step: 2321. Total energy = 1363.6728 kcal/mol (1356.6180 without restraints) Performing minimization step: 2322. Total energy = 1363.2301 kcal/mol (1356.1784 without restraints) Performing minimization step: 2323. Total energy = 1362.7880 kcal/mol (1355.7393 without restraints) Performing minimization step: 2324. Total energy = 1362.3463 kcal/mol (1355.3007 without restraints) Performing minimization step: 2325. Total energy = 1361.9057 kcal/mol (1354.8631 without restraints) Performing minimization step: 2326. Total energy = 1361.4658 kcal/mol (1354.4263 without restraints) Performing minimization step: 2327. Total energy = 1361.0271 kcal/mol (1353.9906 without restraints) Performing minimization step: 2328. Total energy = 1360.5887 kcal/mol (1353.5552 without restraints) Performing minimization step: 2329. Total energy = 1360.1510 kcal/mol (1353.1207 without restraints) Performing minimization step: 2330. Total energy = 1359.7139 kcal/mol (1352.6864 without restraints) Performing minimization step: 2331. Total energy = 1359.2778 kcal/mol (1352.2536 without restraints) Performing minimization step: 2332. Total energy = 1358.8429 kcal/mol (1351.8217 without restraints) Performing minimization step: 2333. Total energy = 1358.4086 kcal/mol (1351.3904 without restraints) Performing minimization step: 2334. Total energy = 1357.9746 kcal/mol (1350.9595 without restraints) Performing minimization step: 2335. Total energy = 1357.5416 kcal/mol (1350.5297 without restraints) Performing minimization step: 2336. Total energy = 1357.1093 kcal/mol (1350.1003 without restraints) Performing minimization step: 2337. Total energy = 1356.6776 kcal/mol (1349.6716 without restraints) Performing minimization step: 2338. Total energy = 1356.2465 kcal/mol (1349.2435 without restraints) Performing minimization step: 2339. Total energy = 1355.8157 kcal/mol (1348.8159 without restraints) Performing minimization step: 2340. Total energy = 1355.3863 kcal/mol (1348.3894 without restraints) Performing minimization step: 2341. Total energy = 1354.9575 kcal/mol (1347.9637 without restraints) Performing minimization step: 2342. Total energy = 1354.5294 kcal/mol (1347.5387 without restraints) Performing minimization step: 2343. Total energy = 1354.1022 kcal/mol (1347.1145 without restraints) Performing minimization step: 2344. Total energy = 1353.6755 kcal/mol (1346.6909 without restraints) Performing minimization step: 2345. Total energy = 1353.2497 kcal/mol (1346.2681 without restraints) Performing minimization step: 2346. Total energy = 1352.8246 kcal/mol (1345.8460 without restraints) Performing minimization step: 2347. Total energy = 1352.4001 kcal/mol (1345.4244 without restraints) Performing minimization step: 2348. Total energy = 1351.9763 kcal/mol (1345.0038 without restraints) Performing minimization step: 2349. Total energy = 1351.5535 kcal/mol (1344.5841 without restraints) Performing minimization step: 2350. Total energy = 1351.1313 kcal/mol (1344.1649 without restraints) Performing minimization step: 2351. Total energy = 1350.7098 kcal/mol (1343.7464 without restraints) Performing minimization step: 2352. Total energy = 1350.2890 kcal/mol (1343.3287 without restraints) Performing minimization step: 2353. Total energy = 1349.8689 kcal/mol (1342.9116 without restraints) Performing minimization step: 2354. Total energy = 1349.4494 kcal/mol (1342.4951 without restraints) Performing minimization step: 2355. Total energy = 1349.0307 kcal/mol (1342.0795 without restraints) Performing minimization step: 2356. Total energy = 1348.6127 kcal/mol (1341.6646 without restraints) Performing minimization step: 2357. Total energy = 1348.1955 kcal/mol (1341.2504 without restraints) Performing minimization step: 2358. Total energy = 1347.7790 kcal/mol (1340.8369 without restraints) Performing minimization step: 2359. Total energy = 1347.3631 kcal/mol (1340.4241 without restraints) Performing minimization step: 2360. Total energy = 1346.9476 kcal/mol (1340.0116 without restraints) Performing minimization step: 2361. Total energy = 1346.5336 kcal/mol (1339.6006 without restraints) Performing minimization step: 2362. Total energy = 1346.1200 kcal/mol (1339.1901 without restraints) Performing minimization step: 2363. Total energy = 1345.7070 kcal/mol (1338.7801 without restraints) Performing minimization step: 2364. Total energy = 1345.2947 kcal/mol (1338.3708 without restraints) Performing minimization step: 2365. Total energy = 1344.8831 kcal/mol (1337.9622 without restraints) Performing minimization step: 2366. Total energy = 1344.4723 kcal/mol (1337.5546 without restraints) Performing minimization step: 2367. Total energy = 1344.0624 kcal/mol (1337.1477 without restraints) Performing minimization step: 2368. Total energy = 1343.6529 kcal/mol (1336.7412 without restraints) Performing minimization step: 2369. Total energy = 1343.2441 kcal/mol (1336.3354 without restraints) Performing minimization step: 2370. Total energy = 1342.8361 kcal/mol (1335.9304 without restraints) Performing minimization step: 2371. Total energy = 1342.4286 kcal/mol (1335.5260 without restraints) Performing minimization step: 2372. Total energy = 1342.0219 kcal/mol (1335.1223 without restraints) Performing minimization step: 2373. Total energy = 1341.6158 kcal/mol (1334.7193 without restraints) Performing minimization step: 2374. Total energy = 1341.2105 kcal/mol (1334.3170 without restraints) Performing minimization step: 2375. Total energy = 1340.8058 kcal/mol (1333.9153 without restraints) Performing minimization step: 2376. Total energy = 1340.4019 kcal/mol (1333.5144 without restraints) Performing minimization step: 2377. Total energy = 1339.9990 kcal/mol (1333.1146 without restraints) Performing minimization step: 2378. Total energy = 1339.5965 kcal/mol (1332.7151 without restraints) Performing minimization step: 2379. Total energy = 1339.1946 kcal/mol (1332.3162 without restraints) Performing minimization step: 2380. Total energy = 1338.7933 kcal/mol (1331.9178 without restraints) Performing minimization step: 2381. Total energy = 1338.3929 kcal/mol (1331.5205 without restraints) Performing minimization step: 2382. Total energy = 1337.9931 kcal/mol (1331.1237 without restraints) Performing minimization step: 2383. Total energy = 1337.5938 kcal/mol (1330.7275 without restraints) Performing minimization step: 2384. Total energy = 1337.1953 kcal/mol (1330.3320 without restraints) Performing minimization step: 2385. Total energy = 1336.7976 kcal/mol (1329.9373 without restraints) Performing minimization step: 2386. Total energy = 1336.4002 kcal/mol (1329.5430 without restraints) Performing minimization step: 2387. Total energy = 1336.0040 kcal/mol (1329.1498 without restraints) Performing minimization step: 2388. Total energy = 1335.6082 kcal/mol (1328.7570 without restraints) Performing minimization step: 2389. Total energy = 1335.2132 kcal/mol (1328.3651 without restraints) Performing minimization step: 2390. Total energy = 1334.8189 kcal/mol (1327.9737 without restraints) Performing minimization step: 2391. Total energy = 1334.4251 kcal/mol (1327.5830 without restraints) Performing minimization step: 2392. Total energy = 1334.0320 kcal/mol (1327.1929 without restraints) Performing minimization step: 2393. Total energy = 1333.6396 kcal/mol (1326.8035 without restraints) Performing minimization step: 2394. Total energy = 1333.2477 kcal/mol (1326.4146 without restraints) Performing minimization step: 2395. Total energy = 1332.8566 kcal/mol (1326.0265 without restraints) Performing minimization step: 2396. Total energy = 1332.4665 kcal/mol (1325.6393 without restraints) Performing minimization step: 2397. Total energy = 1332.0766 kcal/mol (1325.2526 without restraints) Performing minimization step: 2398. Total energy = 1331.6875 kcal/mol (1324.8665 without restraints) Performing minimization step: 2399. Total energy = 1331.2990 kcal/mol (1324.4809 without restraints) Performing minimization step: 2400. Total energy = 1330.9109 kcal/mol (1324.0959 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/97a58f6c/tmp/complex_refx/complex_refx.pdb ...Done. Performing minimization step: 2401. Total energy = 1330.5238 kcal/mol (1323.7118 without restraints) Performing minimization step: 2402. Total energy = 1330.1373 kcal/mol (1323.3282 without restraints) Performing minimization step: 2403. Total energy = 1329.7513 kcal/mol (1322.9453 without restraints) Performing minimization step: 2404. Total energy = 1329.3662 kcal/mol (1322.5633 without restraints) Performing minimization step: 2405. Total energy = 1328.9819 kcal/mol (1322.1819 without restraints) Performing minimization step: 2406. Total energy = 1328.5980 kcal/mol (1321.8011 without restraints) Performing minimization step: 2407. Total energy = 1328.2150 kcal/mol (1321.4211 without restraints) Performing minimization step: 2408. Total energy = 1327.8325 kcal/mol (1321.0416 without restraints) Performing minimization step: 2409. Total energy = 1327.4506 kcal/mol (1320.6627 without restraints) Performing minimization step: 2410. Total energy = 1327.0692 kcal/mol (1320.2841 without restraints) Performing minimization step: 2411. Total energy = 1326.6880 kcal/mol (1319.9061 without restraints) Performing minimization step: 2412. Total energy = 1326.3081 kcal/mol (1319.5292 without restraints) Performing minimization step: 2413. Total energy = 1325.9294 kcal/mol (1319.1537 without restraints) Performing minimization step: 2414. Total energy = 1325.5509 kcal/mol (1318.7780 without restraints) Performing minimization step: 2415. Total energy = 1325.1728 kcal/mol (1318.4029 without restraints) Performing minimization step: 2416. Total energy = 1324.7954 kcal/mol (1318.0286 without restraints) Performing minimization step: 2417. Total energy = 1324.4186 kcal/mol (1317.6549 without restraints) Performing minimization step: 2418. Total energy = 1324.0426 kcal/mol (1317.2817 without restraints) Performing minimization step: 2419. Total energy = 1323.6669 kcal/mol (1316.9091 without restraints) Performing minimization step: 2420. Total energy = 1323.2918 kcal/mol (1316.5370 without restraints) Performing minimization step: 2421. Total energy = 1322.9176 kcal/mol (1316.1657 without restraints) Performing minimization step: 2422. Total energy = 1322.5440 kcal/mol (1315.7951 without restraints) Performing minimization step: 2423. Total energy = 1322.1710 kcal/mol (1315.4251 without restraints) Performing minimization step: 2424. Total energy = 1321.7990 kcal/mol (1315.0562 without restraints) Performing minimization step: 2425. Total energy = 1321.4274 kcal/mol (1314.6876 without restraints) Performing minimization step: 2426. Total energy = 1321.0568 kcal/mol (1314.3202 without restraints) Performing minimization step: 2427. Total energy = 1320.6864 kcal/mol (1313.9525 without restraints) Performing minimization step: 2428. Total energy = 1320.3166 kcal/mol (1313.5857 without restraints) Performing minimization step: 2429. Total energy = 1319.9476 kcal/mol (1313.2198 without restraints) Performing minimization step: 2430. Total energy = 1319.5791 kcal/mol (1312.8543 without restraints) Performing minimization step: 2431. Total energy = 1319.2114 kcal/mol (1312.4894 without restraints) Performing minimization step: 2432. Total energy = 1318.8441 kcal/mol (1312.1252 without restraints) Performing minimization step: 2433. Total energy = 1318.4774 kcal/mol (1311.7616 without restraints) Performing minimization step: 2434. Total energy = 1318.1114 kcal/mol (1311.3986 without restraints) Performing minimization step: 2435. Total energy = 1317.7460 kcal/mol (1311.0362 without restraints) Performing minimization step: 2436. Total energy = 1317.3817 kcal/mol (1310.6749 without restraints) Performing minimization step: 2437. Total energy = 1317.0176 kcal/mol (1310.3137 without restraints) Performing minimization step: 2438. Total energy = 1316.6542 kcal/mol (1309.9533 without restraints) Performing minimization step: 2439. Total energy = 1316.2915 kcal/mol (1309.5936 without restraints) Performing minimization step: 2440. Total energy = 1315.9290 kcal/mol (1309.2341 without restraints) Performing minimization step: 2441. Total energy = 1315.5674 kcal/mol (1308.8755 without restraints) Performing minimization step: 2442. Total energy = 1315.2063 kcal/mol (1308.5174 without restraints) Performing minimization step: 2443. Total energy = 1314.8458 kcal/mol (1308.1599 without restraints) Performing minimization step: 2444. Total energy = 1314.4863 kcal/mol (1307.8036 without restraints) Performing minimization step: 2445. Total energy = 1314.1273 kcal/mol (1307.4474 without restraints) Performing minimization step: 2446. Total energy = 1313.7687 kcal/mol (1307.0917 without restraints) Performing minimization step: 2447. Total energy = 1313.4107 kcal/mol (1306.7367 without restraints) Performing minimization step: 2448. Total energy = 1313.0533 kcal/mol (1306.3823 without restraints) Performing minimization step: 2449. Total energy = 1312.6964 kcal/mol (1306.0285 without restraints) Performing minimization step: 2450. Total energy = 1312.3402 kcal/mol (1305.6751 without restraints) Performing minimization step: 2451. Total energy = 1311.9846 kcal/mol (1305.3226 without restraints) Performing minimization step: 2452. Total energy = 1311.6297 kcal/mol (1304.9707 without restraints) Performing minimization step: 2453. Total energy = 1311.2753 kcal/mol (1304.6193 without restraints) Performing minimization step: 2454. Total energy = 1310.9215 kcal/mol (1304.2684 without restraints) Performing minimization step: 2455. Total energy = 1310.5682 kcal/mol (1303.9182 without restraints) Performing minimization step: 2456. Total energy = 1310.2159 kcal/mol (1303.5688 without restraints) Performing minimization step: 2457. Total energy = 1309.8641 kcal/mol (1303.2200 without restraints) Performing minimization step: 2458. Total energy = 1309.5127 kcal/mol (1302.8716 without restraints) Performing minimization step: 2459. Total energy = 1309.1621 kcal/mol (1302.5240 without restraints) Performing minimization step: 2460. Total energy = 1308.8120 kcal/mol (1302.1769 without restraints) Performing minimization step: 2461. Total energy = 1308.4624 kcal/mol (1301.8302 without restraints) Performing minimization step: 2462. Total energy = 1308.1134 kcal/mol (1301.4843 without restraints) Performing minimization step: 2463. Total energy = 1307.7651 kcal/mol (1301.1389 without restraints) Performing minimization step: 2464. Total energy = 1307.4173 kcal/mol (1300.7941 without restraints) Performing minimization step: 2465. Total energy = 1307.0707 kcal/mol (1300.4505 without restraints) Performing minimization step: 2466. Total energy = 1306.7241 kcal/mol (1300.1068 without restraints) Performing minimization step: 2467. Total energy = 1306.3782 kcal/mol (1299.7641 without restraints) Performing minimization step: 2468. Total energy = 1306.0330 kcal/mol (1299.4217 without restraints) Performing minimization step: 2469. Total energy = 1305.6877 kcal/mol (1299.0792 without restraints) Performing minimization step: 2470. Total energy = 1305.3434 kcal/mol (1298.7381 without restraints) Performing minimization step: 2471. Total energy = 1304.9999 kcal/mol (1298.3976 without restraints) Performing minimization step: 2472. Total energy = 1304.6568 kcal/mol (1298.0574 without restraints) Performing minimization step: 2473. Total energy = 1304.3143 kcal/mol (1297.7179 without restraints) Performing minimization step: 2474. Total energy = 1303.9724 kcal/mol (1297.3790 without restraints) Performing minimization step: 2475. Total energy = 1303.6310 kcal/mol (1297.0406 without restraints) Performing minimization step: 2476. Total energy = 1303.2903 kcal/mol (1296.7029 without restraints) Performing minimization step: 2477. Total energy = 1302.9504 kcal/mol (1296.3659 without restraints) Performing minimization step: 2478. Total energy = 1302.6108 kcal/mol (1296.0293 without restraints) Performing minimization step: 2479. Total energy = 1302.2716 kcal/mol (1295.6930 without restraints) Performing minimization step: 2480. Total energy = 1301.9335 kcal/mol (1295.3579 without restraints) Performing minimization step: 2481. Total energy = 1301.5956 kcal/mol (1295.0230 without restraints) Performing minimization step: 2482. Total energy = 1301.2583 kcal/mol (1294.6887 without restraints) Performing minimization step: 2483. Total energy = 1300.9216 kcal/mol (1294.3549 without restraints) Performing minimization step: 2484. Total energy = 1300.5855 kcal/mol (1294.0218 without restraints) Performing minimization step: 2485. Total energy = 1300.2499 kcal/mol (1293.6892 without restraints) Performing minimization step: 2486. Total energy = 1299.9151 kcal/mol (1293.3573 without restraints) Performing minimization step: 2487. Total energy = 1299.5807 kcal/mol (1293.0259 without restraints) Performing minimization step: 2488. Total energy = 1299.2468 kcal/mol (1292.6950 without restraints) Performing minimization step: 2489. Total energy = 1298.9135 kcal/mol (1292.3647 without restraints) Performing minimization step: 2490. Total energy = 1298.5810 kcal/mol (1292.0351 without restraints) Performing minimization step: 2491. Total energy = 1298.2488 kcal/mol (1291.7059 without restraints) Performing minimization step: 2492. Total energy = 1297.9172 kcal/mol (1291.3772 without restraints) Performing minimization step: 2493. Total energy = 1297.5861 kcal/mol (1291.0492 without restraints) Performing minimization step: 2494. Total energy = 1297.2556 kcal/mol (1290.7216 without restraints) Performing minimization step: 2495. Total energy = 1296.9257 kcal/mol (1290.3946 without restraints) Performing minimization step: 2496. Total energy = 1296.5963 kcal/mol (1290.0682 without restraints) Performing minimization step: 2497. Total energy = 1296.2675 kcal/mol (1289.7424 without restraints) Performing minimization step: 2498. Total energy = 1295.9393 kcal/mol (1289.4171 without restraints) Performing minimization step: 2499. Total energy = 1295.6116 kcal/mol (1289.0924 without restraints) Performing minimization step: 2500. Total energy = 1295.2843 kcal/mol (1288.7681 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/97a58f6c/tmp/complex_refx/complex_refx.pdb ...Done. Performing minimization step: 2501. Total energy = 1294.9577 kcal/mol (1288.4445 without restraints) Performing minimization step: 2502. Total energy = 1294.6323 kcal/mol (1288.1220 without restraints) Performing minimization step: 2503. Total energy = 1294.3069 kcal/mol (1287.7996 without restraints) Performing minimization step: 2504. Total energy = 1293.9821 kcal/mol (1287.4778 without restraints) Performing minimization step: 2505. Total energy = 1293.6578 kcal/mol (1287.1564 without restraints) Performing minimization step: 2506. Total energy = 1293.3338 kcal/mol (1286.8354 without restraints) Performing minimization step: 2507. Total energy = 1293.0107 kcal/mol (1286.5153 without restraints) Performing minimization step: 2508. Total energy = 1292.6885 kcal/mol (1286.1959 without restraints) Performing minimization step: 2509. Total energy = 1292.3663 kcal/mol (1285.8767 without restraints) Performing minimization step: 2510. Total energy = 1292.0446 kcal/mol (1285.5580 without restraints) Performing minimization step: 2511. Total energy = 1291.7235 kcal/mol (1285.2399 without restraints) Performing minimization step: 2512. Total energy = 1291.4030 kcal/mol (1284.9223 without restraints) Performing minimization step: 2513. Total energy = 1291.0832 kcal/mol (1284.6057 without restraints) Performing minimization step: 2514. Total energy = 1290.7640 kcal/mol (1284.2892 without restraints) Performing minimization step: 2515. Total energy = 1290.4451 kcal/mol (1283.9733 without restraints) Performing minimization step: 2516. Total energy = 1290.1270 kcal/mol (1283.6581 without restraints) Performing minimization step: 2517. Total energy = 1289.8093 kcal/mol (1283.3434 without restraints) Performing minimization step: 2518. Total energy = 1289.4926 kcal/mol (1283.0297 without restraints) Performing minimization step: 2519. Total energy = 1289.1758 kcal/mol (1282.7157 without restraints) Performing minimization step: 2520. Total energy = 1288.8595 kcal/mol (1282.4024 without restraints) Performing minimization step: 2521. Total energy = 1288.5438 kcal/mol (1282.0897 without restraints) Performing minimization step: 2522. Total energy = 1288.2286 kcal/mol (1281.7775 without restraints) Performing minimization step: 2523. Total energy = 1287.9140 kcal/mol (1281.4658 without restraints) Performing minimization step: 2524. Total energy = 1287.5997 kcal/mol (1281.1543 without restraints) Performing minimization step: 2525. Total energy = 1287.2860 kcal/mol (1280.8437 without restraints) Performing minimization step: 2526. Total energy = 1286.9732 kcal/mol (1280.5338 without restraints) Performing minimization step: 2527. Total energy = 1286.6609 kcal/mol (1280.2245 without restraints) Performing minimization step: 2528. Total energy = 1286.3489 kcal/mol (1279.9155 without restraints) Performing minimization step: 2529. Total energy = 1286.0375 kcal/mol (1279.6070 without restraints) Performing minimization step: 2530. Total energy = 1285.7267 kcal/mol (1279.2992 without restraints) Performing minimization step: 2531. Total energy = 1285.4163 kcal/mol (1278.9918 without restraints) Performing minimization step: 2532. Total energy = 1285.1064 kcal/mol (1278.6848 without restraints) Performing minimization step: 2533. Total energy = 1284.7969 kcal/mol (1278.3782 without restraints) Performing minimization step: 2534. Total energy = 1284.4879 kcal/mol (1278.0721 without restraints) Performing minimization step: 2535. Total energy = 1284.1795 kcal/mol (1277.7668 without restraints) Performing minimization step: 2536. Total energy = 1283.8719 kcal/mol (1277.4621 without restraints) Performing minimization step: 2537. Total energy = 1283.5647 kcal/mol (1277.1578 without restraints) Performing minimization step: 2538. Total energy = 1283.2579 kcal/mol (1276.8540 without restraints) Performing minimization step: 2539. Total energy = 1282.9514 kcal/mol (1276.5505 without restraints) Performing minimization step: 2540. Total energy = 1282.6458 kcal/mol (1276.2477 without restraints) Performing minimization step: 2541. Total energy = 1282.3405 kcal/mol (1275.9454 without restraints) Performing minimization step: 2542. Total energy = 1282.0360 kcal/mol (1275.6439 without restraints) Performing minimization step: 2543. Total energy = 1281.7318 kcal/mol (1275.3426 without restraints) Performing minimization step: 2544. Total energy = 1281.4281 kcal/mol (1275.0419 without restraints) Performing minimization step: 2545. Total energy = 1281.1249 kcal/mol (1274.7416 without restraints) Performing minimization step: 2546. Total energy = 1280.8227 kcal/mol (1274.4423 without restraints) Performing minimization step: 2547. Total energy = 1280.5206 kcal/mol (1274.1431 without restraints) Performing minimization step: 2548. Total energy = 1280.2189 kcal/mol (1273.8444 without restraints) Performing minimization step: 2549. Total energy = 1279.9175 kcal/mol (1273.5460 without restraints) Performing minimization step: 2550. Total energy = 1279.6169 kcal/mol (1273.2484 without restraints) Performing minimization step: 2551. Total energy = 1279.3171 kcal/mol (1272.9514 without restraints) Performing minimization step: 2552. Total energy = 1279.0175 kcal/mol (1272.6547 without restraints) Performing minimization step: 2553. Total energy = 1278.7187 kcal/mol (1272.3590 without restraints) Performing minimization step: 2554. Total energy = 1278.4202 kcal/mol (1272.0632 without restraints) Performing minimization step: 2555. Total energy = 1278.1217 kcal/mol (1271.7678 without restraints) Performing minimization step: 2556. Total energy = 1277.8244 kcal/mol (1271.4734 without restraints) Performing minimization step: 2557. Total energy = 1277.5273 kcal/mol (1271.1792 without restraints) Performing minimization step: 2558. Total energy = 1277.2306 kcal/mol (1270.8855 without restraints) Performing minimization step: 2559. Total energy = 1276.9347 kcal/mol (1270.5925 without restraints) Performing minimization step: 2560. Total energy = 1276.6390 kcal/mol (1270.2997 without restraints) Performing minimization step: 2561. Total energy = 1276.3440 kcal/mol (1270.0077 without restraints) Performing minimization step: 2562. Total energy = 1276.0496 kcal/mol (1269.7162 without restraints) Performing minimization step: 2563. Total energy = 1275.7553 kcal/mol (1269.4248 without restraints) Performing minimization step: 2564. Total energy = 1275.4616 kcal/mol (1269.1341 without restraints) Performing minimization step: 2565. Total energy = 1275.1683 kcal/mol (1268.8438 without restraints) Performing minimization step: 2566. Total energy = 1274.8760 kcal/mol (1268.5543 without restraints) Performing minimization step: 2567. Total energy = 1274.5839 kcal/mol (1268.2652 without restraints) Performing minimization step: 2568. Total energy = 1274.2921 kcal/mol (1267.9763 without restraints) Performing minimization step: 2569. Total energy = 1274.0006 kcal/mol (1267.6878 without restraints) Performing minimization step: 2570. Total energy = 1273.7098 kcal/mol (1267.3999 without restraints) Performing minimization step: 2571. Total energy = 1273.4196 kcal/mol (1267.1126 without restraints) Performing minimization step: 2572. Total energy = 1273.1301 kcal/mol (1266.8260 without restraints) Performing minimization step: 2573. Total energy = 1272.8407 kcal/mol (1266.5395 without restraints) Performing minimization step: 2574. Total energy = 1272.5520 kcal/mol (1266.2537 without restraints) Performing minimization step: 2575. Total energy = 1272.2634 kcal/mol (1265.9680 without restraints) Performing minimization step: 2576. Total energy = 1271.9756 kcal/mol (1265.6832 without restraints) Performing minimization step: 2577. Total energy = 1271.6885 kcal/mol (1265.3990 without restraints) Performing minimization step: 2578. Total energy = 1271.4015 kcal/mol (1265.1149 without restraints) Performing minimization step: 2579. Total energy = 1271.1149 kcal/mol (1264.8314 without restraints) Performing minimization step: 2580. Total energy = 1270.8289 kcal/mol (1264.5482 without restraints) Performing minimization step: 2581. Total energy = 1270.5433 kcal/mol (1264.2655 without restraints) Performing minimization step: 2582. Total energy = 1270.2582 kcal/mol (1263.9834 without restraints) Performing minimization step: 2583. Total energy = 1269.9735 kcal/mol (1263.7016 without restraints) Performing minimization step: 2584. Total energy = 1269.6892 kcal/mol (1263.4201 without restraints) Performing minimization step: 2585. Total energy = 1269.4057 kcal/mol (1263.1397 without restraints) Performing minimization step: 2586. Total energy = 1269.1225 kcal/mol (1262.8593 without restraints) Performing minimization step: 2587. Total energy = 1268.8396 kcal/mol (1262.5795 without restraints) Performing minimization step: 2588. Total energy = 1268.5574 kcal/mol (1262.3001 without restraints) Performing minimization step: 2589. Total energy = 1268.2757 kcal/mol (1262.0213 without restraints) Performing minimization step: 2590. Total energy = 1267.9942 kcal/mol (1261.7428 without restraints) Performing minimization step: 2591. Total energy = 1267.7133 kcal/mol (1261.4647 without restraints) Performing minimization step: 2592. Total energy = 1267.4327 kcal/mol (1261.1871 without restraints) Performing minimization step: 2593. Total energy = 1267.1527 kcal/mol (1260.9099 without restraints) Performing minimization step: 2594. Total energy = 1266.8735 kcal/mol (1260.6338 without restraints) Performing minimization step: 2595. Total energy = 1266.5944 kcal/mol (1260.3575 without restraints) Performing minimization step: 2596. Total energy = 1266.3157 kcal/mol (1260.0818 without restraints) Performing minimization step: 2597. Total energy = 1266.0377 kcal/mol (1259.8069 without restraints) Performing minimization step: 2598. Total energy = 1265.7606 kcal/mol (1259.5323 without restraints) Performing minimization step: 2599. Total energy = 1265.4831 kcal/mol (1259.2579 without restraints) Performing minimization step: 2600. Total energy = 1265.2063 kcal/mol (1258.9841 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/97a58f6c/tmp/complex_refx/complex_refx.pdb ...Done. Performing minimization step: 2601. Total energy = 1264.9303 kcal/mol (1258.7110 without restraints) Performing minimization step: 2602. Total energy = 1264.6545 kcal/mol (1258.4380 without restraints) Performing minimization step: 2603. Total energy = 1264.3789 kcal/mol (1258.1653 without restraints) Performing minimization step: 2604. Total energy = 1264.1038 kcal/mol (1257.8931 without restraints) Performing minimization step: 2605. Total energy = 1263.8293 kcal/mol (1257.6215 without restraints) Performing minimization step: 2606. Total energy = 1263.5553 kcal/mol (1257.3504 without restraints) Performing minimization step: 2607. Total energy = 1263.2815 kcal/mol (1257.0795 without restraints) Performing minimization step: 2608. Total energy = 1263.0084 kcal/mol (1256.8094 without restraints) Performing minimization step: 2609. Total energy = 1262.7356 kcal/mol (1256.5394 without restraints) Performing minimization step: 2610. Total energy = 1262.4630 kcal/mol (1256.2698 without restraints) Performing minimization step: 2611. Total energy = 1262.1911 kcal/mol (1256.0008 without restraints) Performing minimization step: 2612. Total energy = 1261.9195 kcal/mol (1255.7321 without restraints) Performing minimization step: 2613. Total energy = 1261.6486 kcal/mol (1255.4640 without restraints) Performing minimization step: 2614. Total energy = 1261.3778 kcal/mol (1255.1962 without restraints) Performing minimization step: 2615. Total energy = 1261.1073 kcal/mol (1254.9286 without restraints) Performing minimization step: 2616. Total energy = 1260.8373 kcal/mol (1254.6615 without restraints) Performing minimization step: 2617. Total energy = 1260.5674 kcal/mol (1254.3945 without restraints) Performing minimization step: 2618. Total energy = 1260.2986 kcal/mol (1254.1286 without restraints) Performing minimization step: 2619. Total energy = 1260.0299 kcal/mol (1253.8628 without restraints) Performing minimization step: 2620. Total energy = 1259.7617 kcal/mol (1253.5975 without restraints) Performing minimization step: 2621. Total energy = 1259.4939 kcal/mol (1253.3326 without restraints) Performing minimization step: 2622. Total energy = 1259.2265 kcal/mol (1253.0681 without restraints) Performing minimization step: 2623. Total energy = 1258.9598 kcal/mol (1252.8043 without restraints) Performing minimization step: 2624. Total energy = 1258.6937 kcal/mol (1252.5410 without restraints) Performing minimization step: 2625. Total energy = 1258.4273 kcal/mol (1252.2776 without restraints) Performing minimization step: 2626. Total energy = 1258.1617 kcal/mol (1252.0149 without restraints) Performing minimization step: 2627. Total energy = 1257.8964 kcal/mol (1251.7525 without restraints) Performing minimization step: 2628. Total energy = 1257.6315 kcal/mol (1251.4905 without restraints) Performing minimization step: 2629. Total energy = 1257.3671 kcal/mol (1251.2289 without restraints) Performing minimization step: 2630. Total energy = 1257.1030 kcal/mol (1250.9677 without restraints) Performing minimization step: 2631. Total energy = 1256.8396 kcal/mol (1250.7072 without restraints) Performing minimization step: 2632. Total energy = 1256.5764 kcal/mol (1250.4469 without restraints) Performing minimization step: 2633. Total energy = 1256.3136 kcal/mol (1250.1870 without restraints) Performing minimization step: 2634. Total energy = 1256.0512 kcal/mol (1249.9275 without restraints) Performing minimization step: 2635. Total energy = 1255.7892 kcal/mol (1249.6684 without restraints) Performing minimization step: 2636. Total energy = 1255.5273 kcal/mol (1249.4092 without restraints) Performing minimization step: 2637. Total energy = 1255.2658 kcal/mol (1249.1508 without restraints) Performing minimization step: 2638. Total energy = 1255.0050 kcal/mol (1248.8929 without restraints) Performing minimization step: 2639. Total energy = 1254.7446 kcal/mol (1248.6354 without restraints) Performing minimization step: 2640. Total energy = 1254.4846 kcal/mol (1248.3783 without restraints) Performing minimization step: 2641. Total energy = 1254.2251 kcal/mol (1248.1216 without restraints) Performing minimization step: 2642. Total energy = 1253.9659 kcal/mol (1247.8653 without restraints) Performing minimization step: 2643. Total energy = 1253.7067 kcal/mol (1247.6090 without restraints) Performing minimization step: 2644. Total energy = 1253.4483 kcal/mol (1247.3535 without restraints) Performing minimization step: 2645. Total energy = 1253.1901 kcal/mol (1247.0980 without restraints) Performing minimization step: 2646. Total energy = 1252.9325 kcal/mol (1246.8435 without restraints) Performing minimization step: 2647. Total energy = 1252.6752 kcal/mol (1246.5889 without restraints) Performing minimization step: 2648. Total energy = 1252.4183 kcal/mol (1246.3350 without restraints) Performing minimization step: 2649. Total energy = 1252.1621 kcal/mol (1246.0817 without restraints) Performing minimization step: 2650. Total energy = 1251.9060 kcal/mol (1245.8283 without restraints) Performing minimization step: 2651. Total energy = 1251.6502 kcal/mol (1245.5755 without restraints) Performing minimization step: 2652. Total energy = 1251.3949 kcal/mol (1245.3231 without restraints) Performing minimization step: 2653. Total energy = 1251.1400 kcal/mol (1245.0711 without restraints) Performing minimization step: 2654. Total energy = 1250.8855 kcal/mol (1244.8195 without restraints) Performing minimization step: 2655. Total energy = 1250.6314 kcal/mol (1244.5682 without restraints) Performing minimization step: 2656. Total energy = 1250.3779 kcal/mol (1244.3176 without restraints) Performing minimization step: 2657. Total energy = 1250.1247 kcal/mol (1244.0673 without restraints) Performing minimization step: 2658. Total energy = 1249.8716 kcal/mol (1243.8170 without restraints) Performing minimization step: 2659. Total energy = 1249.6192 kcal/mol (1243.5676 without restraints) Performing minimization step: 2660. Total energy = 1249.3671 kcal/mol (1243.3183 without restraints) Performing minimization step: 2661. Total energy = 1249.1152 kcal/mol (1243.0693 without restraints) Performing minimization step: 2662. Total energy = 1248.8638 kcal/mol (1242.8207 without restraints) Performing minimization step: 2663. Total energy = 1248.6131 kcal/mol (1242.5729 without restraints) Performing minimization step: 2664. Total energy = 1248.3625 kcal/mol (1242.3251 without restraints) Performing minimization step: 2665. Total energy = 1248.1122 kcal/mol (1242.0777 without restraints) Performing minimization step: 2666. Total energy = 1247.8622 kcal/mol (1241.8306 without restraints) Performing minimization step: 2667. Total energy = 1247.6126 kcal/mol (1241.5838 without restraints) Performing minimization step: 2668. Total energy = 1247.3634 kcal/mol (1241.3376 without restraints) Performing minimization step: 2669. Total energy = 1247.1149 kcal/mol (1241.0920 without restraints) Performing minimization step: 2670. Total energy = 1246.8665 kcal/mol (1240.8464 without restraints) Performing minimization step: 2671. Total energy = 1246.6184 kcal/mol (1240.6011 without restraints) Performing minimization step: 2672. Total energy = 1246.3706 kcal/mol (1240.3562 without restraints) Performing minimization step: 2673. Total energy = 1246.1230 kcal/mol (1240.1113 without restraints) Performing minimization step: 2674. Total energy = 1245.8754 kcal/mol (1239.8667 without restraints) Performing minimization step: 2675. Total energy = 1245.6292 kcal/mol (1239.6233 without restraints) Performing minimization step: 2676. Total energy = 1245.3829 kcal/mol (1239.3799 without restraints) Performing minimization step: 2677. Total energy = 1245.1369 kcal/mol (1239.1368 without restraints) Performing minimization step: 2678. Total energy = 1244.8912 kcal/mol (1238.8939 without restraints) Performing minimization step: 2679. Total energy = 1244.6459 kcal/mol (1238.6515 without restraints) Performing minimization step: 2680. Total energy = 1244.4011 kcal/mol (1238.4095 without restraints) Performing minimization step: 2681. Total energy = 1244.1565 kcal/mol (1238.1678 without restraints) Performing minimization step: 2682. Total energy = 1243.9124 kcal/mol (1237.9265 without restraints) Performing minimization step: 2683. Total energy = 1243.6688 kcal/mol (1237.6858 without restraints) Performing minimization step: 2684. Total energy = 1243.4253 kcal/mol (1237.4452 without restraints) Performing minimization step: 2685. Total energy = 1243.1822 kcal/mol (1237.2048 without restraints) Performing minimization step: 2686. Total energy = 1242.9393 kcal/mol (1236.9649 without restraints) Performing minimization step: 2687. Total energy = 1242.6969 kcal/mol (1236.7253 without restraints) Performing minimization step: 2688. Total energy = 1242.4549 kcal/mol (1236.4861 without restraints) Performing minimization step: 2689. Total energy = 1242.2132 kcal/mol (1236.2473 without restraints) Performing minimization step: 2690. Total energy = 1241.9721 kcal/mol (1236.0090 without restraints) Performing minimization step: 2691. Total energy = 1241.7309 kcal/mol (1235.7706 without restraints) Performing minimization step: 2692. Total energy = 1241.4902 kcal/mol (1235.5328 without restraints) Performing minimization step: 2693. Total energy = 1241.2498 kcal/mol (1235.2953 without restraints) Performing minimization step: 2694. Total energy = 1241.0098 kcal/mol (1235.0581 without restraints) Performing minimization step: 2695. Total energy = 1240.7702 kcal/mol (1234.8214 without restraints) Performing minimization step: 2696. Total energy = 1240.5309 kcal/mol (1234.5849 without restraints) Performing minimization step: 2697. Total energy = 1240.2922 kcal/mol (1234.3491 without restraints) Performing minimization step: 2698. Total energy = 1240.0542 kcal/mol (1234.1139 without restraints) Performing minimization step: 2699. Total energy = 1239.8159 kcal/mol (1233.8784 without restraints) Performing minimization step: 2700. Total energy = 1239.5779 kcal/mol (1233.6433 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/97a58f6c/tmp/complex_refx/complex_refx.pdb ...Done. Performing minimization step: 2701. Total energy = 1239.3401 kcal/mol (1233.4083 without restraints) Performing minimization step: 2702. Total energy = 1239.1028 kcal/mol (1233.1738 without restraints) Performing minimization step: 2703. Total energy = 1238.8658 kcal/mol (1232.9396 without restraints) Performing minimization step: 2704. Total energy = 1238.6290 kcal/mol (1232.7056 without restraints) Performing minimization step: 2705. Total energy = 1238.3927 kcal/mol (1232.4724 without restraints) Performing minimization step: 2706. Total energy = 1238.1568 kcal/mol (1232.2392 without restraints) Performing minimization step: 2707. Total energy = 1237.9212 kcal/mol (1232.0064 without restraints) Performing minimization step: 2708. Total energy = 1237.6856 kcal/mol (1231.7736 without restraints) Performing minimization step: 2709. Total energy = 1237.4508 kcal/mol (1231.5418 without restraints) Performing minimization step: 2710. Total energy = 1237.2162 kcal/mol (1231.3099 without restraints) Performing minimization step: 2711. Total energy = 1236.9818 kcal/mol (1231.0783 without restraints) Performing minimization step: 2712. Total energy = 1236.7478 kcal/mol (1230.8471 without restraints) Performing minimization step: 2713. Total energy = 1236.5142 kcal/mol (1230.6166 without restraints) Performing minimization step: 2714. Total energy = 1236.2813 kcal/mol (1230.3862 without restraints) Performing minimization step: 2715. Total energy = 1236.0484 kcal/mol (1230.1562 without restraints) Performing minimization step: 2716. Total energy = 1235.8155 kcal/mol (1229.9262 without restraints) Performing minimization step: 2717. Total energy = 1235.5833 kcal/mol (1229.6967 without restraints) Performing minimization step: 2718. Total energy = 1235.3512 kcal/mol (1229.4674 without restraints) Performing minimization step: 2719. Total energy = 1235.1193 kcal/mol (1229.2384 without restraints) Performing minimization step: 2720. Total energy = 1234.8878 kcal/mol (1229.0097 without restraints) Performing minimization step: 2721. Total energy = 1234.6568 kcal/mol (1228.7815 without restraints) Performing minimization step: 2722. Total energy = 1234.4259 kcal/mol (1228.5534 without restraints) Performing minimization step: 2723. Total energy = 1234.1953 kcal/mol (1228.3256 without restraints) Performing minimization step: 2724. Total energy = 1233.9649 kcal/mol (1228.0981 without restraints) Performing minimization step: 2725. Total energy = 1233.7350 kcal/mol (1227.8709 without restraints) Performing minimization step: 2726. Total energy = 1233.5053 kcal/mol (1227.6441 without restraints) Performing minimization step: 2727. Total energy = 1233.2760 kcal/mol (1227.4175 without restraints) Performing minimization step: 2728. Total energy = 1233.0470 kcal/mol (1227.1914 without restraints) Performing minimization step: 2729. Total energy = 1232.8182 kcal/mol (1226.9654 without restraints) Performing minimization step: 2730. Total energy = 1232.5898 kcal/mol (1226.7398 without restraints) Performing minimization step: 2731. Total energy = 1232.3616 kcal/mol (1226.5144 without restraints) Performing minimization step: 2732. Total energy = 1232.1339 kcal/mol (1226.2895 without restraints) Performing minimization step: 2733. Total energy = 1231.9061 kcal/mol (1226.0646 without restraints) Performing minimization step: 2734. Total energy = 1231.6789 kcal/mol (1225.8401 without restraints) Performing minimization step: 2735. Total energy = 1231.4519 kcal/mol (1225.6159 without restraints) Performing minimization step: 2736. Total energy = 1231.2253 kcal/mol (1225.3921 without restraints) Performing minimization step: 2737. Total energy = 1230.9989 kcal/mol (1225.1685 without restraints) Performing minimization step: 2738. Total energy = 1230.7726 kcal/mol (1224.9450 without restraints) Performing minimization step: 2739. Total energy = 1230.5468 kcal/mol (1224.7220 without restraints) Performing minimization step: 2740. Total energy = 1230.3213 kcal/mol (1224.4994 without restraints) Performing minimization step: 2741. Total energy = 1230.0964 kcal/mol (1224.2772 without restraints) Performing minimization step: 2742. Total energy = 1229.8715 kcal/mol (1224.0551 without restraints) Performing minimization step: 2743. Total energy = 1229.6471 kcal/mol (1223.8337 without restraints) Performing minimization step: 2744. Total energy = 1229.4230 kcal/mol (1223.6122 without restraints) Performing minimization step: 2745. Total energy = 1229.1990 kcal/mol (1223.3910 without restraints) Performing minimization step: 2746. Total energy = 1228.9754 kcal/mol (1223.1702 without restraints) Performing minimization step: 2747. Total energy = 1228.7521 kcal/mol (1222.9497 without restraints) Performing minimization step: 2748. Total energy = 1228.5289 kcal/mol (1222.7293 without restraints) Performing minimization step: 2749. Total energy = 1228.3060 kcal/mol (1222.5092 without restraints) Performing minimization step: 2750. Total energy = 1228.0836 kcal/mol (1222.2895 without restraints) Performing minimization step: 2751. Total energy = 1227.8610 kcal/mol (1222.0697 without restraints) Performing minimization step: 2752. Total energy = 1227.6391 kcal/mol (1221.8507 without restraints) Performing minimization step: 2753. Total energy = 1227.4171 kcal/mol (1221.6314 without restraints) Performing minimization step: 2754. Total energy = 1227.1958 kcal/mol (1221.4129 without restraints) Performing minimization step: 2755. Total energy = 1226.9743 kcal/mol (1221.1942 without restraints) Performing minimization step: 2756. Total energy = 1226.7534 kcal/mol (1220.9760 without restraints) Performing minimization step: 2757. Total energy = 1226.5327 kcal/mol (1220.7581 without restraints) Performing minimization step: 2758. Total energy = 1226.3126 kcal/mol (1220.5408 without restraints) Performing minimization step: 2759. Total energy = 1226.0923 kcal/mol (1220.3232 without restraints) Performing minimization step: 2760. Total energy = 1225.8723 kcal/mol (1220.1059 without restraints) Performing minimization step: 2761. Total energy = 1225.6526 kcal/mol (1219.8891 without restraints) Performing minimization step: 2762. Total energy = 1225.4332 kcal/mol (1219.6723 without restraints) Performing minimization step: 2763. Total energy = 1225.2140 kcal/mol (1219.4560 without restraints) Performing minimization step: 2764. Total energy = 1224.9955 kcal/mol (1219.2402 without restraints) Performing minimization step: 2765. Total energy = 1224.7769 kcal/mol (1219.0245 without restraints) Performing minimization step: 2766. Total energy = 1224.5589 kcal/mol (1218.8093 without restraints) Performing minimization step: 2767. Total energy = 1224.3411 kcal/mol (1218.5943 without restraints) Performing minimization step: 2768. Total energy = 1224.1235 kcal/mol (1218.3793 without restraints) Performing minimization step: 2769. Total energy = 1223.9060 kcal/mol (1218.1646 without restraints) Performing minimization step: 2770. Total energy = 1223.6887 kcal/mol (1217.9501 without restraints) Performing minimization step: 2771. Total energy = 1223.4718 kcal/mol (1217.7359 without restraints) Performing minimization step: 2772. Total energy = 1223.2551 kcal/mol (1217.5220 without restraints) Performing minimization step: 2773. Total energy = 1223.0385 kcal/mol (1217.3081 without restraints) Performing minimization step: 2774. Total energy = 1222.8223 kcal/mol (1217.0947 without restraints) Performing minimization step: 2775. Total energy = 1222.6064 kcal/mol (1216.8815 without restraints) Performing minimization step: 2776. Total energy = 1222.3907 kcal/mol (1216.6686 without restraints) Performing minimization step: 2777. Total energy = 1222.1756 kcal/mol (1216.4563 without restraints) Performing minimization step: 2778. Total energy = 1221.9607 kcal/mol (1216.2441 without restraints) Performing minimization step: 2779. Total energy = 1221.7458 kcal/mol (1216.0320 without restraints) Performing minimization step: 2780. Total energy = 1221.5313 kcal/mol (1215.8202 without restraints) Performing minimization step: 2781. Total energy = 1221.3169 kcal/mol (1215.6086 without restraints) Performing minimization step: 2782. Total energy = 1221.1028 kcal/mol (1215.3972 without restraints) Performing minimization step: 2783. Total energy = 1220.8889 kcal/mol (1215.1860 without restraints) Performing minimization step: 2784. Total energy = 1220.6754 kcal/mol (1214.9753 without restraints) Performing minimization step: 2785. Total energy = 1220.4620 kcal/mol (1214.7646 without restraints) Performing minimization step: 2786. Total energy = 1220.2490 kcal/mol (1214.5543 without restraints) Performing minimization step: 2787. Total energy = 1220.0360 kcal/mol (1214.3441 without restraints) Performing minimization step: 2788. Total energy = 1219.8233 kcal/mol (1214.1342 without restraints) Performing minimization step: 2789. Total energy = 1219.6109 kcal/mol (1213.9245 without restraints) Performing minimization step: 2790. Total energy = 1219.3987 kcal/mol (1213.7150 without restraints) Performing minimization step: 2791. Total energy = 1219.1868 kcal/mol (1213.5058 without restraints) Performing minimization step: 2792. Total energy = 1218.9750 kcal/mol (1213.2968 without restraints) Performing minimization step: 2793. Total energy = 1218.7634 kcal/mol (1213.0878 without restraints) Performing minimization step: 2794. Total energy = 1218.5520 kcal/mol (1212.8792 without restraints) Performing minimization step: 2795. Total energy = 1218.3414 kcal/mol (1212.6715 without restraints) Performing minimization step: 2796. Total energy = 1218.1307 kcal/mol (1212.4634 without restraints) Performing minimization step: 2797. Total energy = 1217.9202 kcal/mol (1212.2556 without restraints) Performing minimization step: 2798. Total energy = 1217.7099 kcal/mol (1212.0481 without restraints) Performing minimization step: 2799. Total energy = 1217.5002 kcal/mol (1211.8411 without restraints) Performing minimization step: 2800. Total energy = 1217.2904 kcal/mol (1211.6340 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/97a58f6c/tmp/complex_refx/complex_refx.pdb ...Done. Performing minimization step: 2801. Total energy = 1217.0807 kcal/mol (1211.4270 without restraints) Performing minimization step: 2802. Total energy = 1216.8713 kcal/mol (1211.2204 without restraints) Performing minimization step: 2803. Total energy = 1216.6622 kcal/mol (1211.0140 without restraints) Performing minimization step: 2804. Total energy = 1216.4533 kcal/mol (1210.8078 without restraints) Performing minimization step: 2805. Total energy = 1216.2444 kcal/mol (1210.6015 without restraints) Performing minimization step: 2806. Total energy = 1216.0359 kcal/mol (1210.3958 without restraints) Performing minimization step: 2807. Total energy = 1215.8276 kcal/mol (1210.1902 without restraints) Performing minimization step: 2808. Total energy = 1215.6196 kcal/mol (1209.9849 without restraints) Performing minimization step: 2809. Total energy = 1215.4118 kcal/mol (1209.7800 without restraints) Performing minimization step: 2810. Total energy = 1215.2044 kcal/mol (1209.5751 without restraints) Performing minimization step: 2811. Total energy = 1214.9970 kcal/mol (1209.3704 without restraints) Performing minimization step: 2812. Total energy = 1214.7898 kcal/mol (1209.1659 without restraints) Performing minimization step: 2813. Total energy = 1214.5829 kcal/mol (1208.9617 without restraints) Performing minimization step: 2814. Total energy = 1214.3763 kcal/mol (1208.7578 without restraints) Performing minimization step: 2815. Total energy = 1214.1699 kcal/mol (1208.5542 without restraints) Performing minimization step: 2816. Total energy = 1213.9636 kcal/mol (1208.3505 without restraints) Performing minimization step: 2817. Total energy = 1213.7574 kcal/mol (1208.1468 without restraints) Performing minimization step: 2818. Total energy = 1213.5515 kcal/mol (1207.9440 without restraints) Performing minimization step: 2819. Total energy = 1213.3461 kcal/mol (1207.7411 without restraints) Performing minimization step: 2820. Total energy = 1213.1406 kcal/mol (1207.5383 without restraints) Performing minimization step: 2821. Total energy = 1212.9356 kcal/mol (1207.3361 without restraints) Performing minimization step: 2822. Total energy = 1212.7307 kcal/mol (1207.1338 without restraints) Performing minimization step: 2823. Total energy = 1212.5261 kcal/mol (1206.9319 without restraints) Performing minimization step: 2824. Total energy = 1212.3218 kcal/mol (1206.7302 without restraints) Performing minimization step: 2825. Total energy = 1212.1173 kcal/mol (1206.5285 without restraints) Performing minimization step: 2826. Total energy = 1211.9133 kcal/mol (1206.3271 without restraints) Performing minimization step: 2827. Total energy = 1211.7093 kcal/mol (1206.1259 without restraints) Performing minimization step: 2828. Total energy = 1211.5056 kcal/mol (1205.9248 without restraints) Performing minimization step: 2829. Total energy = 1211.3018 kcal/mol (1205.7236 without restraints) Performing minimization step: 2830. Total energy = 1211.0983 kcal/mol (1205.5229 without restraints) Performing minimization step: 2831. Total energy = 1210.8950 kcal/mol (1205.3222 without restraints) Performing minimization step: 2832. Total energy = 1210.6921 kcal/mol (1205.1219 without restraints) Performing minimization step: 2833. Total energy = 1210.4891 kcal/mol (1204.9216 without restraints) Performing minimization step: 2834. Total energy = 1210.2865 kcal/mol (1204.7217 without restraints) Performing minimization step: 2835. Total energy = 1210.0841 kcal/mol (1204.5220 without restraints) Performing minimization step: 2836. Total energy = 1209.8820 kcal/mol (1204.3225 without restraints) Performing minimization step: 2837. Total energy = 1209.6799 kcal/mol (1204.1232 without restraints) Performing minimization step: 2838. Total energy = 1209.4783 kcal/mol (1203.9243 without restraints) Performing minimization step: 2839. Total energy = 1209.2767 kcal/mol (1203.7253 without restraints) Performing minimization step: 2840. Total energy = 1209.0755 kcal/mol (1203.5267 without restraints) Performing minimization step: 2841. Total energy = 1208.8746 kcal/mol (1203.3286 without restraints) Performing minimization step: 2842. Total energy = 1208.6738 kcal/mol (1203.1304 without restraints) Performing minimization step: 2843. Total energy = 1208.4732 kcal/mol (1202.9324 without restraints) Performing minimization step: 2844. Total energy = 1208.2726 kcal/mol (1202.7344 without restraints) Performing minimization step: 2845. Total energy = 1208.0721 kcal/mol (1202.5366 without restraints) Performing minimization step: 2846. Total energy = 1207.8717 kcal/mol (1202.3389 without restraints) Performing minimization step: 2847. Total energy = 1207.6714 kcal/mol (1202.1412 without restraints) Performing minimization step: 2848. Total energy = 1207.4715 kcal/mol (1201.9439 without restraints) Performing minimization step: 2849. Total energy = 1207.2717 kcal/mol (1201.7468 without restraints) Performing minimization step: 2850. Total energy = 1207.0721 kcal/mol (1201.5498 without restraints) Performing minimization step: 2851. Total energy = 1206.8727 kcal/mol (1201.3531 without restraints) Performing minimization step: 2852. Total energy = 1206.6734 kcal/mol (1201.1564 without restraints) Performing minimization step: 2853. Total energy = 1206.4745 kcal/mol (1200.9603 without restraints) Performing minimization step: 2854. Total energy = 1206.2758 kcal/mol (1200.7641 without restraints) Performing minimization step: 2855. Total energy = 1206.0772 kcal/mol (1200.5681 without restraints) Performing minimization step: 2856. Total energy = 1205.8789 kcal/mol (1200.3725 without restraints) Performing minimization step: 2857. Total energy = 1205.6806 kcal/mol (1200.1768 without restraints) Performing minimization step: 2858. Total energy = 1205.4826 kcal/mol (1199.9815 without restraints) Performing minimization step: 2859. Total energy = 1205.2846 kcal/mol (1199.7861 without restraints) Performing minimization step: 2860. Total energy = 1205.0870 kcal/mol (1199.5911 without restraints) Performing minimization step: 2861. Total energy = 1204.8894 kcal/mol (1199.3960 without restraints) Performing minimization step: 2862. Total energy = 1204.6920 kcal/mol (1199.2012 without restraints) Performing minimization step: 2863. Total energy = 1204.4945 kcal/mol (1199.0064 without restraints) Performing minimization step: 2864. Total energy = 1204.2979 kcal/mol (1198.8124 without restraints) Performing minimization step: 2865. Total energy = 1204.1008 kcal/mol (1198.6180 without restraints) Performing minimization step: 2866. Total energy = 1203.9037 kcal/mol (1198.4234 without restraints) Performing minimization step: 2867. Total energy = 1203.7070 kcal/mol (1198.2294 without restraints) Performing minimization step: 2868. Total energy = 1203.5109 kcal/mol (1198.0359 without restraints) Performing minimization step: 2869. Total energy = 1203.3146 kcal/mol (1197.8422 without restraints) Performing minimization step: 2870. Total energy = 1203.1186 kcal/mol (1197.6486 without restraints) Performing minimization step: 2871. Total energy = 1202.9228 kcal/mol (1197.4557 without restraints) Performing minimization step: 2872. Total energy = 1202.7265 kcal/mol (1197.2619 without restraints) Performing minimization step: 2873. Total energy = 1202.5308 kcal/mol (1197.0688 without restraints) Performing minimization step: 2874. Total energy = 1202.3355 kcal/mol (1196.8761 without restraints) Performing minimization step: 2875. Total energy = 1202.1401 kcal/mol (1196.6833 without restraints) Performing minimization step: 2876. Total energy = 1201.9451 kcal/mol (1196.4909 without restraints) Performing minimization step: 2877. Total energy = 1201.7500 kcal/mol (1196.2985 without restraints) Performing minimization step: 2878. Total energy = 1201.5553 kcal/mol (1196.1063 without restraints) Performing minimization step: 2879. Total energy = 1201.3605 kcal/mol (1195.9141 without restraints) Performing minimization step: 2880. Total energy = 1201.1659 kcal/mol (1195.7221 without restraints) Performing minimization step: 2881. Total energy = 1200.9714 kcal/mol (1195.5302 without restraints) Performing minimization step: 2882. Total energy = 1200.7773 kcal/mol (1195.3386 without restraints) Performing minimization step: 2883. Total energy = 1200.5831 kcal/mol (1195.1470 without restraints) Performing minimization step: 2884. Total energy = 1200.3893 kcal/mol (1194.9558 without restraints) Performing minimization step: 2885. Total energy = 1200.1957 kcal/mol (1194.7648 without restraints) Performing minimization step: 2886. Total energy = 1200.0016 kcal/mol (1194.5732 without restraints) Performing minimization step: 2887. Total energy = 1199.8080 kcal/mol (1194.3822 without restraints) Performing minimization step: 2888. Total energy = 1199.6146 kcal/mol (1194.1914 without restraints) Performing minimization step: 2889. Total energy = 1199.4213 kcal/mol (1194.0007 without restraints) Performing minimization step: 2890. Total energy = 1199.2286 kcal/mol (1193.8107 without restraints) Performing minimization step: 2891. Total energy = 1199.0359 kcal/mol (1193.6204 without restraints) Performing minimization step: 2892. Total energy = 1198.8430 kcal/mol (1193.4301 without restraints) Performing minimization step: 2893. Total energy = 1198.6502 kcal/mol (1193.2399 without restraints) Performing minimization step: 2894. Total energy = 1198.4576 kcal/mol (1193.0499 without restraints) Performing minimization step: 2895. Total energy = 1198.2652 kcal/mol (1192.8600 without restraints) Performing minimization step: 2896. Total energy = 1198.0726 kcal/mol (1192.6699 without restraints) Performing minimization step: 2897. Total energy = 1197.8804 kcal/mol (1192.4803 without restraints) Performing minimization step: 2898. Total energy = 1197.6884 kcal/mol (1192.2908 without restraints) Performing minimization step: 2899. Total energy = 1197.4964 kcal/mol (1192.1014 without restraints) Performing minimization step: 2900. Total energy = 1197.3044 kcal/mol (1191.9120 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/97a58f6c/tmp/complex_refx/complex_refx.pdb ...Done. Performing minimization step: 2901. Total energy = 1197.1129 kcal/mol (1191.7230 without restraints) Performing minimization step: 2902. Total energy = 1196.9214 kcal/mol (1191.5340 without restraints) Performing minimization step: 2903. Total energy = 1196.7299 kcal/mol (1191.3451 without restraints) Performing minimization step: 2904. Total energy = 1196.5386 kcal/mol (1191.1563 without restraints) Performing minimization step: 2905. Total energy = 1196.3475 kcal/mol (1190.9677 without restraints) Performing minimization step: 2906. Total energy = 1196.1564 kcal/mol (1190.7792 without restraints) Performing minimization step: 2907. Total energy = 1195.9656 kcal/mol (1190.5909 without restraints) Performing minimization step: 2908. Total energy = 1195.7748 kcal/mol (1190.4026 without restraints) Performing minimization step: 2909. Total energy = 1195.5841 kcal/mol (1190.2145 without restraints) Performing minimization step: 2910. Total energy = 1195.3936 kcal/mol (1190.0265 without restraints) Performing minimization step: 2911. Total energy = 1195.2031 kcal/mol (1189.8386 without restraints) Performing minimization step: 2912. Total energy = 1195.0128 kcal/mol (1189.6508 without restraints) Performing minimization step: 2913. Total energy = 1194.8227 kcal/mol (1189.4633 without restraints) Performing minimization step: 2914. Total energy = 1194.6328 kcal/mol (1189.2758 without restraints) Performing minimization step: 2915. Total energy = 1194.4428 kcal/mol (1189.0884 without restraints) Performing minimization step: 2916. Total energy = 1194.2532 kcal/mol (1188.9013 without restraints) Performing minimization step: 2917. Total energy = 1194.0635 kcal/mol (1188.7141 without restraints) Performing minimization step: 2918. Total energy = 1193.8741 kcal/mol (1188.5272 without restraints) Performing minimization step: 2919. Total energy = 1193.6848 kcal/mol (1188.3404 without restraints) Performing minimization step: 2920. Total energy = 1193.4956 kcal/mol (1188.1537 without restraints) Performing minimization step: 2921. Total energy = 1193.3063 kcal/mol (1187.9669 without restraints) Performing minimization step: 2922. Total energy = 1193.1172 kcal/mol (1187.7804 without restraints) Performing minimization step: 2923. Total energy = 1192.9284 kcal/mol (1187.5940 without restraints) Performing minimization step: 2924. Total energy = 1192.7397 kcal/mol (1187.4078 without restraints) Performing minimization step: 2925. Total energy = 1192.5508 kcal/mol (1187.2214 without restraints) Performing minimization step: 2926. Total energy = 1192.3623 kcal/mol (1187.0353 without restraints) Performing minimization step: 2927. Total energy = 1192.1739 kcal/mol (1186.8494 without restraints) Performing minimization step: 2928. Total energy = 1191.9853 kcal/mol (1186.6634 without restraints) Performing minimization step: 2929. Total energy = 1191.7969 kcal/mol (1186.4774 without restraints) Performing minimization step: 2930. Total energy = 1191.6083 kcal/mol (1186.2913 without restraints) Performing minimization step: 2931. Total energy = 1191.4201 kcal/mol (1186.1056 without restraints) Performing minimization step: 2932. Total energy = 1191.2320 kcal/mol (1185.9199 without restraints) Performing minimization step: 2933. Total energy = 1191.0439 kcal/mol (1185.7343 without restraints) Performing minimization step: 2934. Total energy = 1190.8566 kcal/mol (1185.5496 without restraints) Performing minimization step: 2935. Total energy = 1190.6686 kcal/mol (1185.3642 without restraints) Performing minimization step: 2936. Total energy = 1190.4810 kcal/mol (1185.1789 without restraints) Performing minimization step: 2937. Total energy = 1190.2935 kcal/mol (1184.9939 without restraints) Performing minimization step: 2938. Total energy = 1190.1059 kcal/mol (1184.8087 without restraints) Performing minimization step: 2939. Total energy = 1189.9185 kcal/mol (1184.6239 without restraints) Performing minimization step: 2940. Total energy = 1189.7310 kcal/mol (1184.4387 without restraints) Performing minimization step: 2941. Total energy = 1189.5435 kcal/mol (1184.2535 without restraints) Performing minimization step: 2942. Total energy = 1189.3562 kcal/mol (1184.0689 without restraints) Performing minimization step: 2943. Total energy = 1189.1691 kcal/mol (1183.8842 without restraints) Performing minimization step: 2944. Total energy = 1188.9820 kcal/mol (1183.6995 without restraints) Performing minimization step: 2945. Total energy = 1188.7950 kcal/mol (1183.5150 without restraints) Performing minimization step: 2946. Total energy = 1188.6083 kcal/mol (1183.3307 without restraints) Performing minimization step: 2947. Total energy = 1188.4215 kcal/mol (1183.1464 without restraints) Performing minimization step: 2948. Total energy = 1188.2350 kcal/mol (1182.9625 without restraints) Performing minimization step: 2949. Total energy = 1188.0485 kcal/mol (1182.7782 without restraints) Performing minimization step: 2950. Total energy = 1187.8618 kcal/mol (1182.5939 without restraints) Performing minimization step: 2951. Total energy = 1187.6752 kcal/mol (1182.4098 without restraints) Performing minimization step: 2952. Total energy = 1187.4887 kcal/mol (1182.2258 without restraints) Performing minimization step: 2953. Total energy = 1187.3026 kcal/mol (1182.0421 without restraints) Performing minimization step: 2954. Total energy = 1187.1160 kcal/mol (1181.8579 without restraints) Performing minimization step: 2955. Total energy = 1186.9299 kcal/mol (1181.6743 without restraints) Performing minimization step: 2956. Total energy = 1186.7439 kcal/mol (1181.4906 without restraints) Performing minimization step: 2957. Total energy = 1186.5578 kcal/mol (1181.3069 without restraints) Performing minimization step: 2958. Total energy = 1186.3718 kcal/mol (1181.1233 without restraints) Performing minimization step: 2959. Total energy = 1186.1857 kcal/mol (1180.9396 without restraints) Performing minimization step: 2960. Total energy = 1185.9997 kcal/mol (1180.7563 without restraints) Performing minimization step: 2961. Total energy = 1185.8138 kcal/mol (1180.5726 without restraints) Performing minimization step: 2962. Total energy = 1185.6285 kcal/mol (1180.3897 without restraints) Performing minimization step: 2963. Total energy = 1185.4428 kcal/mol (1180.2065 without restraints) Performing minimization step: 2964. Total energy = 1185.2572 kcal/mol (1180.0232 without restraints) Performing minimization step: 2965. Total energy = 1185.0717 kcal/mol (1179.8401 without restraints) Performing minimization step: 2966. Total energy = 1184.8862 kcal/mol (1179.6570 without restraints) Performing minimization step: 2967. Total energy = 1184.7012 kcal/mol (1179.4743 without restraints) Performing minimization step: 2968. Total energy = 1184.5157 kcal/mol (1179.2912 without restraints) Performing minimization step: 2969. Total energy = 1184.3303 kcal/mol (1179.1083 without restraints) Performing minimization step: 2970. Total energy = 1184.1449 kcal/mol (1178.9252 without restraints) Performing minimization step: 2971. Total energy = 1183.9596 kcal/mol (1178.7423 without restraints) Performing minimization step: 2972. Total energy = 1183.7744 kcal/mol (1178.5595 without restraints) Performing minimization step: 2973. Total energy = 1183.5892 kcal/mol (1178.3765 without restraints) Performing minimization step: 2974. Total energy = 1183.4041 kcal/mol (1178.1940 without restraints) Performing minimization step: 2975. Total energy = 1183.2194 kcal/mol (1178.0116 without restraints) Performing minimization step: 2976. Total energy = 1183.0347 kcal/mol (1177.8293 without restraints) Performing minimization step: 2977. Total energy = 1182.8495 kcal/mol (1177.6465 without restraints) Performing minimization step: 2978. Total energy = 1182.6646 kcal/mol (1177.4640 without restraints) Performing minimization step: 2979. Total energy = 1182.4799 kcal/mol (1177.2816 without restraints) Performing minimization step: 2980. Total energy = 1182.2949 kcal/mol (1177.0989 without restraints) Performing minimization step: 2981. Total energy = 1182.1101 kcal/mol (1176.9166 without restraints) Performing minimization step: 2982. Total energy = 1181.9253 kcal/mol (1176.7340 without restraints) Performing minimization step: 2983. Total energy = 1181.7407 kcal/mol (1176.5518 without restraints) Performing minimization step: 2984. Total energy = 1181.5561 kcal/mol (1176.3695 without restraints) Performing minimization step: 2985. Total energy = 1181.3714 kcal/mol (1176.1873 without restraints) Performing minimization step: 2986. Total energy = 1181.1869 kcal/mol (1176.0051 without restraints) Performing minimization step: 2987. Total energy = 1181.0024 kcal/mol (1175.8229 without restraints) Performing minimization step: 2988. Total energy = 1180.8176 kcal/mol (1175.6403 without restraints) Performing minimization step: 2989. Total energy = 1180.6331 kcal/mol (1175.4583 without restraints) Performing minimization step: 2990. Total energy = 1180.4487 kcal/mol (1175.2762 without restraints) Performing minimization step: 2991. Total energy = 1180.2646 kcal/mol (1175.0944 without restraints) Performing minimization step: 2992. Total energy = 1180.0803 kcal/mol (1174.9124 without restraints) Performing minimization step: 2993. Total energy = 1179.8961 kcal/mol (1174.7305 without restraints) Performing minimization step: 2994. Total energy = 1179.7118 kcal/mol (1174.5486 without restraints) Performing minimization step: 2995. Total energy = 1179.5273 kcal/mol (1174.3664 without restraints) Performing minimization step: 2996. Total energy = 1179.3431 kcal/mol (1174.1845 without restraints) Performing minimization step: 2997. Total energy = 1179.1589 kcal/mol (1174.0026 without restraints) Performing minimization step: 2998. Total energy = 1178.9748 kcal/mol (1173.8208 without restraints) Performing minimization step: 2999. Total energy = 1178.7906 kcal/mol (1173.6389 without restraints) Performing minimization step: 3000. Total energy = 1178.6063 kcal/mol (1173.4568 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/97a58f6c/tmp/complex_refx/complex_refx.pdb ...Done. Performing minimization step: 3001. Total energy = 1178.4221 kcal/mol (1173.2750 without restraints) Performing minimization step: 3002. Total energy = 1178.2382 kcal/mol (1173.0935 without restraints) Performing minimization step: 3003. Total energy = 1178.0542 kcal/mol (1172.9117 without restraints) Performing minimization step: 3004. Total energy = 1177.8701 kcal/mol (1172.7299 without restraints) Performing minimization step: 3005. Total energy = 1177.6859 kcal/mol (1172.5480 without restraints) Performing minimization step: 3006. Total energy = 1177.5017 kcal/mol (1172.3661 without restraints) Performing minimization step: 3007. Total energy = 1177.3177 kcal/mol (1172.1844 without restraints) Performing minimization step: 3008. Total energy = 1177.1337 kcal/mol (1172.0027 without restraints) Performing minimization step: 3009. Total energy = 1176.9501 kcal/mol (1171.8214 without restraints) Performing minimization step: 3010. Total energy = 1176.7662 kcal/mol (1171.6397 without restraints) Performing minimization step: 3011. Total energy = 1176.5825 kcal/mol (1171.4584 without restraints) Performing minimization step: 3012. Total energy = 1176.3989 kcal/mol (1171.2769 without restraints) Performing minimization step: 3013. Total energy = 1176.2153 kcal/mol (1171.0956 without restraints) Performing minimization step: 3014. Total energy = 1176.0312 kcal/mol (1170.9137 without restraints) Performing minimization step: 3015. Total energy = 1175.8472 kcal/mol (1170.7320 without restraints) Performing minimization step: 3016. Total energy = 1175.6634 kcal/mol (1170.5506 without restraints) Performing minimization step: 3017. Total energy = 1175.4796 kcal/mol (1170.3689 without restraints) Performing minimization step: 3018. Total energy = 1175.2957 kcal/mol (1170.1872 without restraints) Performing minimization step: 3019. Total energy = 1175.1115 kcal/mol (1170.0053 without restraints) Performing minimization step: 3020. Total energy = 1174.9276 kcal/mol (1169.8237 without restraints) Performing minimization step: 3021. Total energy = 1174.7436 kcal/mol (1169.6418 without restraints) Performing minimization step: 3022. Total energy = 1174.5595 kcal/mol (1169.4601 without restraints) Performing minimization step: 3023. Total energy = 1174.3756 kcal/mol (1169.2783 without restraints) Performing minimization step: 3024. Total energy = 1174.1916 kcal/mol (1169.0966 without restraints) Performing minimization step: 3025. Total energy = 1174.0077 kcal/mol (1168.9149 without restraints) Performing minimization step: 3026. Total energy = 1173.8245 kcal/mol (1168.7339 without restraints) Performing minimization step: 3027. Total energy = 1173.6409 kcal/mol (1168.5526 without restraints) Performing minimization step: 3028. Total energy = 1173.4569 kcal/mol (1168.3708 without restraints) Performing minimization step: 3029. Total energy = 1173.2732 kcal/mol (1168.1893 without restraints) Performing minimization step: 3030. Total energy = 1173.0891 kcal/mol (1168.0073 without restraints) Performing minimization step: 3031. Total energy = 1172.9050 kcal/mol (1167.8255 without restraints) Performing minimization step: 3032. Total energy = 1172.7210 kcal/mol (1167.6437 without restraints) Performing minimization step: 3033. Total energy = 1172.5370 kcal/mol (1167.4621 without restraints) Performing minimization step: 3034. Total energy = 1172.3530 kcal/mol (1167.2802 without restraints) Performing minimization step: 3035. Total energy = 1172.1691 kcal/mol (1167.0984 without restraints) Performing minimization step: 3036. Total energy = 1171.9850 kcal/mol (1166.9165 without restraints) Performing minimization step: 3037. Total energy = 1171.8009 kcal/mol (1166.7346 without restraints) Performing minimization step: 3038. Total energy = 1171.6167 kcal/mol (1166.5526 without restraints) Performing minimization step: 3039. Total energy = 1171.4325 kcal/mol (1166.3706 without restraints) Performing minimization step: 3040. Total energy = 1171.2484 kcal/mol (1166.1886 without restraints) Performing minimization step: 3041. Total energy = 1171.0643 kcal/mol (1166.0068 without restraints) Performing minimization step: 3042. Total energy = 1170.8799 kcal/mol (1165.8245 without restraints) Performing minimization step: 3043. Total energy = 1170.6958 kcal/mol (1165.6425 without restraints) Performing minimization step: 3044. Total energy = 1170.5112 kcal/mol (1165.4602 without restraints) Performing minimization step: 3045. Total energy = 1170.3269 kcal/mol (1165.2780 without restraints) Performing minimization step: 3046. Total energy = 1170.1425 kcal/mol (1165.0958 without restraints) Performing minimization step: 3047. Total energy = 1169.9581 kcal/mol (1164.9136 without restraints) Performing minimization step: 3048. Total energy = 1169.7737 kcal/mol (1164.7313 without restraints) Performing minimization step: 3049. Total energy = 1169.5892 kcal/mol (1164.5489 without restraints) Performing minimization step: 3050. Total energy = 1169.4047 kcal/mol (1164.3667 without restraints) Performing minimization step: 3051. Total energy = 1169.2203 kcal/mol (1164.1843 without restraints) Performing minimization step: 3052. Total energy = 1169.0357 kcal/mol (1164.0019 without restraints) Performing minimization step: 3053. Total energy = 1168.8511 kcal/mol (1163.8196 without restraints) Performing minimization step: 3054. Total energy = 1168.6666 kcal/mol (1163.6371 without restraints) Performing minimization step: 3055. Total energy = 1168.4819 kcal/mol (1163.4545 without restraints) Performing minimization step: 3056. Total energy = 1168.2972 kcal/mol (1163.2719 without restraints) Performing minimization step: 3057. Total energy = 1168.1124 kcal/mol (1163.0892 without restraints) Performing minimization step: 3058. Total energy = 1167.9273 kcal/mol (1162.9063 without restraints) Performing minimization step: 3059. Total energy = 1167.7424 kcal/mol (1162.7235 without restraints) Performing minimization step: 3060. Total energy = 1167.5575 kcal/mol (1162.5407 without restraints) Performing minimization step: 3061. Total energy = 1167.3724 kcal/mol (1162.3578 without restraints) Performing minimization step: 3062. Total energy = 1167.1873 kcal/mol (1162.1749 without restraints) Performing minimization step: 3063. Total energy = 1167.0021 kcal/mol (1161.9917 without restraints) Performing minimization step: 3064. Total energy = 1166.8170 kcal/mol (1161.8084 without restraints) Performing minimization step: 3065. Total energy = 1166.6321 kcal/mol (1161.6260 without restraints) Performing minimization step: 3066. Total energy = 1166.4470 kcal/mol (1161.4429 without restraints) Performing minimization step: 3067. Total energy = 1166.2619 kcal/mol (1161.2598 without restraints) Performing minimization step: 3068. Total energy = 1166.0764 kcal/mol (1161.0765 without restraints) Performing minimization step: 3069. Total energy = 1165.8911 kcal/mol (1160.8933 without restraints) Performing minimization step: 3070. Total energy = 1165.7058 kcal/mol (1160.7100 without restraints) Performing minimization step: 3071. Total energy = 1165.5203 kcal/mol (1160.5266 without restraints) Performing minimization step: 3072. Total energy = 1165.3347 kcal/mol (1160.3431 without restraints) Performing minimization step: 3073. Total energy = 1165.1491 kcal/mol (1160.1595 without restraints) Performing minimization step: 3074. Total energy = 1164.9634 kcal/mol (1159.9759 without restraints) Performing minimization step: 3075. Total energy = 1164.7778 kcal/mol (1159.7924 without restraints) Performing minimization step: 3076. Total energy = 1164.5920 kcal/mol (1159.6087 without restraints) Performing minimization step: 3077. Total energy = 1164.4059 kcal/mol (1159.4246 without restraints) Performing minimization step: 3078. Total energy = 1164.2200 kcal/mol (1159.2407 without restraints) Performing minimization step: 3079. Total energy = 1164.0345 kcal/mol (1159.0575 without restraints) Performing minimization step: 3080. Total energy = 1163.8486 kcal/mol (1158.8735 without restraints) Performing minimization step: 3081. Total energy = 1163.6624 kcal/mol (1158.6892 without restraints) Performing minimization step: 3082. Total energy = 1163.4763 kcal/mol (1158.5053 without restraints) Performing minimization step: 3083. Total energy = 1163.2900 kcal/mol (1158.3210 without restraints) Performing minimization step: 3084. Total energy = 1163.1038 kcal/mol (1158.1370 without restraints) Performing minimization step: 3085. Total energy = 1162.9177 kcal/mol (1157.9528 without restraints) Performing minimization step: 3086. Total energy = 1162.7314 kcal/mol (1157.7685 without restraints) Performing minimization step: 3087. Total energy = 1162.5448 kcal/mol (1157.5840 without restraints) Performing minimization step: 3088. Total energy = 1162.3582 kcal/mol (1157.3994 without restraints) Performing minimization step: 3089. Total energy = 1162.1715 kcal/mol (1157.2147 without restraints) Performing minimization step: 3090. Total energy = 1161.9852 kcal/mol (1157.0306 without restraints) Performing minimization step: 3091. Total energy = 1161.7985 kcal/mol (1156.8458 without restraints) Performing minimization step: 3092. Total energy = 1161.6118 kcal/mol (1156.6611 without restraints) Performing minimization step: 3093. Total energy = 1161.4253 kcal/mol (1156.4765 without restraints) Performing minimization step: 3094. Total energy = 1161.2382 kcal/mol (1156.2915 without restraints) Performing minimization step: 3095. Total energy = 1161.0511 kcal/mol (1156.1063 without restraints) Performing minimization step: 3096. Total energy = 1160.8639 kcal/mol (1155.9212 without restraints) Performing minimization step: 3097. Total energy = 1160.6765 kcal/mol (1155.7358 without restraints) Performing minimization step: 3098. Total energy = 1160.4894 kcal/mol (1155.5507 without restraints) Performing minimization step: 3099. Total energy = 1160.3020 kcal/mol (1155.3652 without restraints) Performing minimization step: 3100. Total energy = 1160.1142 kcal/mol (1155.1795 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/97a58f6c/tmp/complex_refx/complex_refx.pdb ...Done. Performing minimization step: 3101. Total energy = 1159.9264 kcal/mol (1154.9936 without restraints) Performing minimization step: 3102. Total energy = 1159.7386 kcal/mol (1154.8077 without restraints) Performing minimization step: 3103. Total energy = 1159.5507 kcal/mol (1154.6219 without restraints) Performing minimization step: 3104. Total energy = 1159.3628 kcal/mol (1154.4360 without restraints) Performing minimization step: 3105. Total energy = 1159.1749 kcal/mol (1154.2500 without restraints) Performing minimization step: 3106. Total energy = 1158.9869 kcal/mol (1154.0640 without restraints) Performing minimization step: 3107. Total energy = 1158.7988 kcal/mol (1153.8778 without restraints) Performing minimization step: 3108. Total energy = 1158.6106 kcal/mol (1153.6917 without restraints) Performing minimization step: 3109. Total energy = 1158.4226 kcal/mol (1153.5056 without restraints) Performing minimization step: 3110. Total energy = 1158.2342 kcal/mol (1153.3191 without restraints) Performing minimization step: 3111. Total energy = 1158.0457 kcal/mol (1153.1326 without restraints) Performing minimization step: 3112. Total energy = 1157.8571 kcal/mol (1152.9460 without restraints) Performing minimization step: 3113. Total energy = 1157.6685 kcal/mol (1152.7593 without restraints) Performing minimization step: 3114. Total energy = 1157.4801 kcal/mol (1152.5730 without restraints) Performing minimization step: 3115. Total energy = 1157.2916 kcal/mol (1152.3863 without restraints) Performing minimization step: 3116. Total energy = 1157.1025 kcal/mol (1152.1992 without restraints) Performing minimization step: 3117. Total energy = 1156.9136 kcal/mol (1152.0121 without restraints) Performing minimization step: 3118. Total energy = 1156.7245 kcal/mol (1151.8250 without restraints) Performing minimization step: 3119. Total energy = 1156.5353 kcal/mol (1151.6377 without restraints) Performing minimization step: 3120. Total energy = 1156.3463 kcal/mol (1151.4506 without restraints) Performing minimization step: 3121. Total energy = 1156.1570 kcal/mol (1151.2632 without restraints) Performing minimization step: 3122. Total energy = 1155.9672 kcal/mol (1151.0753 without restraints) Performing minimization step: 3123. Total energy = 1155.7777 kcal/mol (1150.8878 without restraints) Performing minimization step: 3124. Total energy = 1155.5878 kcal/mol (1150.6998 without restraints) Performing minimization step: 3125. Total energy = 1155.3981 kcal/mol (1150.5120 without restraints) Performing minimization step: 3126. Total energy = 1155.2082 kcal/mol (1150.3240 without restraints) Performing minimization step: 3127. Total energy = 1155.0184 kcal/mol (1150.1362 without restraints) Performing minimization step: 3128. Total energy = 1154.8283 kcal/mol (1149.9479 without restraints) Performing minimization step: 3129. Total energy = 1154.6382 kcal/mol (1149.7597 without restraints) Performing minimization step: 3130. Total energy = 1154.4483 kcal/mol (1149.5717 without restraints) Performing minimization step: 3131. Total energy = 1154.2581 kcal/mol (1149.3834 without restraints) Performing minimization step: 3132. Total energy = 1154.0678 kcal/mol (1149.1950 without restraints) Performing minimization step: 3133. Total energy = 1153.8773 kcal/mol (1149.0064 without restraints) Performing minimization step: 3134. Total energy = 1153.6871 kcal/mol (1148.8182 without restraints) Performing minimization step: 3135. Total energy = 1153.4971 kcal/mol (1148.6299 without restraints) Performing minimization step: 3136. Total energy = 1153.3063 kcal/mol (1148.4410 without restraints) Performing minimization step: 3137. Total energy = 1153.1154 kcal/mol (1148.2520 without restraints) Performing minimization step: 3138. Total energy = 1152.9245 kcal/mol (1148.0629 without restraints) Performing minimization step: 3139. Total energy = 1152.7334 kcal/mol (1147.8737 without restraints) Performing minimization step: 3140. Total energy = 1152.5423 kcal/mol (1147.6844 without restraints) Performing minimization step: 3141. Total energy = 1152.3510 kcal/mol (1147.4950 without restraints) Performing minimization step: 3142. Total energy = 1152.1597 kcal/mol (1147.3056 without restraints) Performing minimization step: 3143. Total energy = 1151.9680 kcal/mol (1147.1157 without restraints) Performing minimization step: 3144. Total energy = 1151.7765 kcal/mol (1146.9261 without restraints) Performing minimization step: 3145. Total energy = 1151.5849 kcal/mol (1146.7363 without restraints) Performing minimization step: 3146. Total energy = 1151.3931 kcal/mol (1146.5464 without restraints) Performing minimization step: 3147. Total energy = 1151.2015 kcal/mol (1146.3566 without restraints) Performing minimization step: 3148. Total energy = 1151.0095 kcal/mol (1146.1665 without restraints) Performing minimization step: 3149. Total energy = 1150.8173 kcal/mol (1145.9761 without restraints) Performing minimization step: 3150. Total energy = 1150.6250 kcal/mol (1145.7856 without restraints) Performing minimization step: 3151. Total energy = 1150.4327 kcal/mol (1145.5951 without restraints) Performing minimization step: 3152. Total energy = 1150.2404 kcal/mol (1145.4047 without restraints) Performing minimization step: 3153. Total energy = 1150.0480 kcal/mol (1145.2141 without restraints) Performing minimization step: 3154. Total energy = 1149.8555 kcal/mol (1145.0234 without restraints) Performing minimization step: 3155. Total energy = 1149.6629 kcal/mol (1144.8326 without restraints) Performing minimization step: 3156. Total energy = 1149.4704 kcal/mol (1144.6419 without restraints) Performing minimization step: 3157. Total energy = 1149.2778 kcal/mol (1144.4512 without restraints) Performing minimization step: 3158. Total energy = 1149.0849 kcal/mol (1144.2601 without restraints) Performing minimization step: 3159. Total energy = 1148.8920 kcal/mol (1144.0690 without restraints) Performing minimization step: 3160. Total energy = 1148.6989 kcal/mol (1143.8777 without restraints) Performing minimization step: 3161. Total energy = 1148.5057 kcal/mol (1143.6863 without restraints) Performing minimization step: 3162. Total energy = 1148.3125 kcal/mol (1143.4949 without restraints) Performing minimization step: 3163. Total energy = 1148.1193 kcal/mol (1143.3035 without restraints) Performing minimization step: 3164. Total energy = 1147.9259 kcal/mol (1143.1119 without restraints) Performing minimization step: 3165. Total energy = 1147.7324 kcal/mol (1142.9201 without restraints) Performing minimization step: 3166. Total energy = 1147.5386 kcal/mol (1142.7281 without restraints) Performing minimization step: 3167. Total energy = 1147.3448 kcal/mol (1142.5361 without restraints) Performing minimization step: 3168. Total energy = 1147.1510 kcal/mol (1142.3441 without restraints) Performing minimization step: 3169. Total energy = 1146.9570 kcal/mol (1142.1519 without restraints) Performing minimization step: 3170. Total energy = 1146.7632 kcal/mol (1141.9598 without restraints) Performing minimization step: 3171. Total energy = 1146.5692 kcal/mol (1141.7677 without restraints) Performing minimization step: 3172. Total energy = 1146.3751 kcal/mol (1141.5753 without restraints) Performing minimization step: 3173. Total energy = 1146.1808 kcal/mol (1141.3828 without restraints) Performing minimization step: 3174. Total energy = 1145.9866 kcal/mol (1141.1904 without restraints) Performing minimization step: 3175. Total energy = 1145.7922 kcal/mol (1140.9978 without restraints) Performing minimization step: 3176. Total energy = 1145.5977 kcal/mol (1140.8050 without restraints) Performing minimization step: 3177. Total energy = 1145.4031 kcal/mol (1140.6121 without restraints) Performing minimization step: 3178. Total energy = 1145.2083 kcal/mol (1140.4190 without restraints) Performing minimization step: 3179. Total energy = 1145.0137 kcal/mol (1140.2263 without restraints) Performing minimization step: 3180. Total energy = 1144.8188 kcal/mol (1140.0331 without restraints) Performing minimization step: 3181. Total energy = 1144.6239 kcal/mol (1139.8399 without restraints) Performing minimization step: 3182. Total energy = 1144.4288 kcal/mol (1139.6466 without restraints) Performing minimization step: 3183. Total energy = 1144.2336 kcal/mol (1139.4532 without restraints) Performing minimization step: 3184. Total energy = 1144.0384 kcal/mol (1139.2597 without restraints) Performing minimization step: 3185. Total energy = 1143.8431 kcal/mol (1139.0661 without restraints) Performing minimization step: 3186. Total energy = 1143.6479 kcal/mol (1138.8726 without restraints) Performing minimization step: 3187. Total energy = 1143.4524 kcal/mol (1138.6789 without restraints) Performing minimization step: 3188. Total energy = 1143.2568 kcal/mol (1138.4850 without restraints) Performing minimization step: 3189. Total energy = 1143.0610 kcal/mol (1138.2909 without restraints) Performing minimization step: 3190. Total energy = 1142.8652 kcal/mol (1138.0969 without restraints) Performing minimization step: 3191. Total energy = 1142.6694 kcal/mol (1137.9028 without restraints) Performing minimization step: 3192. Total energy = 1142.4733 kcal/mol (1137.7085 without restraints) Performing minimization step: 3193. Total energy = 1142.2770 kcal/mol (1137.5138 without restraints) Performing minimization step: 3194. Total energy = 1142.0807 kcal/mol (1137.3193 without restraints) Performing minimization step: 3195. Total energy = 1141.8846 kcal/mol (1137.1249 without restraints) Performing minimization step: 3196. Total energy = 1141.6886 kcal/mol (1136.9306 without restraints) Performing minimization step: 3197. Total energy = 1141.4921 kcal/mol (1136.7358 without restraints) Performing minimization step: 3198. Total energy = 1141.2958 kcal/mol (1136.5413 without restraints) Performing minimization step: 3199. Total energy = 1141.0993 kcal/mol (1136.3464 without restraints) Performing minimization step: 3200. Total energy = 1140.9030 kcal/mol (1136.1518 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/97a58f6c/tmp/complex_refx/complex_refx.pdb ...Done. Performing minimization step: 3201. Total energy = 1140.7068 kcal/mol (1135.9573 without restraints) Performing minimization step: 3202. Total energy = 1140.5101 kcal/mol (1135.7624 without restraints) Performing minimization step: 3203. Total energy = 1140.3134 kcal/mol (1135.5673 without restraints) Performing minimization step: 3204. Total energy = 1140.1166 kcal/mol (1135.3722 without restraints) Performing minimization step: 3205. Total energy = 1139.9197 kcal/mol (1135.1770 without restraints) Performing minimization step: 3206. Total energy = 1139.7228 kcal/mol (1134.9818 without restraints) Performing minimization step: 3207. Total energy = 1139.5262 kcal/mol (1134.7869 without restraints) Performing minimization step: 3208. Total energy = 1139.3290 kcal/mol (1134.5912 without restraints) Performing minimization step: 3209. Total energy = 1139.1317 kcal/mol (1134.3958 without restraints) Performing minimization step: 3210. Total energy = 1138.9345 kcal/mol (1134.2002 without restraints) Performing minimization step: 3211. Total energy = 1138.7372 kcal/mol (1134.0046 without restraints) Performing minimization step: 3212. Total energy = 1138.5398 kcal/mol (1133.8089 without restraints) Performing minimization step: 3213. Total energy = 1138.3423 kcal/mol (1133.6130 without restraints) Performing minimization step: 3214. Total energy = 1138.1449 kcal/mol (1133.4173 without restraints) Performing minimization step: 3215. Total energy = 1137.9473 kcal/mol (1133.2214 without restraints) Performing minimization step: 3216. Total energy = 1137.7497 kcal/mol (1133.0255 without restraints) Performing minimization step: 3217. Total energy = 1137.5520 kcal/mol (1132.8294 without restraints) Performing minimization step: 3218. Total energy = 1137.3543 kcal/mol (1132.6334 without restraints) Performing minimization step: 3219. Total energy = 1137.1567 kcal/mol (1132.4376 without restraints) Performing minimization step: 3220. Total energy = 1136.9592 kcal/mol (1132.2416 without restraints) Performing minimization step: 3221. Total energy = 1136.7611 kcal/mol (1132.0452 without restraints) Performing minimization step: 3222. Total energy = 1136.5632 kcal/mol (1131.8489 without restraints) Performing minimization step: 3223. Total energy = 1136.3651 kcal/mol (1131.6525 without restraints) Performing minimization step: 3224. Total energy = 1136.1670 kcal/mol (1131.4561 without restraints) Performing minimization step: 3225. Total energy = 1135.9689 kcal/mol (1131.2596 without restraints) Performing minimization step: 3226. Total energy = 1135.7707 kcal/mol (1131.0630 without restraints) Performing minimization step: 3227. Total energy = 1135.5726 kcal/mol (1130.8665 without restraints) Performing minimization step: 3228. Total energy = 1135.3740 kcal/mol (1130.6697 without restraints) Performing minimization step: 3229. Total energy = 1135.1757 kcal/mol (1130.4730 without restraints) Performing minimization step: 3230. Total energy = 1134.9773 kcal/mol (1130.2762 without restraints) Performing minimization step: 3231. Total energy = 1134.7791 kcal/mol (1130.0796 without restraints) Performing minimization step: 3232. Total energy = 1134.5806 kcal/mol (1129.8827 without restraints) Performing minimization step: 3233. Total energy = 1134.3822 kcal/mol (1129.6860 without restraints) Performing minimization step: 3234. Total energy = 1134.1836 kcal/mol (1129.4890 without restraints) Performing minimization step: 3235. Total energy = 1133.9851 kcal/mol (1129.2923 without restraints) Performing minimization step: 3236. Total energy = 1133.7870 kcal/mol (1129.0957 without restraints) Performing minimization step: 3237. Total energy = 1133.5883 kcal/mol (1128.8986 without restraints) Performing minimization step: 3238. Total energy = 1133.3896 kcal/mol (1128.7017 without restraints) Performing minimization step: 3239. Total energy = 1133.1912 kcal/mol (1128.5048 without restraints) Performing minimization step: 3240. Total energy = 1132.9924 kcal/mol (1128.3076 without restraints) Performing minimization step: 3241. Total energy = 1132.7941 kcal/mol (1128.1109 without restraints) Performing minimization step: 3242. Total energy = 1132.5952 kcal/mol (1127.9136 without restraints) Performing minimization step: 3243. Total energy = 1132.3963 kcal/mol (1127.7165 without restraints) Performing minimization step: 3244. Total energy = 1132.1975 kcal/mol (1127.5191 without restraints) Performing minimization step: 3245. Total energy = 1131.9988 kcal/mol (1127.3221 without restraints) Performing minimization step: 3246. Total energy = 1131.7998 kcal/mol (1127.1247 without restraints) Performing minimization step: 3247. Total energy = 1131.6009 kcal/mol (1126.9275 without restraints) Performing minimization step: 3248. Total energy = 1131.4016 kcal/mol (1126.7295 without restraints) Performing minimization step: 3249. Total energy = 1131.2024 kcal/mol (1126.5321 without restraints) Performing minimization step: 3250. Total energy = 1131.0038 kcal/mol (1126.3351 without restraints) Performing minimization step: 3251. Total energy = 1130.8045 kcal/mol (1126.1374 without restraints) Performing minimization step: 3252. Total energy = 1130.6055 kcal/mol (1125.9401 without restraints) Performing minimization step: 3253. Total energy = 1130.4065 kcal/mol (1125.7427 without restraints) Performing minimization step: 3254. Total energy = 1130.2074 kcal/mol (1125.5451 without restraints) Performing minimization step: 3255. Total energy = 1130.0079 kcal/mol (1125.3472 without restraints) Performing minimization step: 3256. Total energy = 1129.8086 kcal/mol (1125.1495 without restraints) Performing minimization step: 3257. Total energy = 1129.6093 kcal/mol (1124.9518 without restraints) Performing minimization step: 3258. Total energy = 1129.4098 kcal/mol (1124.7538 without restraints) Performing minimization step: 3259. Total energy = 1129.2104 kcal/mol (1124.5561 without restraints) Performing minimization step: 3260. Total energy = 1129.0110 kcal/mol (1124.3583 without restraints) Performing minimization step: 3261. Total energy = 1128.8116 kcal/mol (1124.1605 without restraints) Performing minimization step: 3262. Total energy = 1128.6122 kcal/mol (1123.9626 without restraints) Performing minimization step: 3263. Total energy = 1128.4128 kcal/mol (1123.7649 without restraints) Performing minimization step: 3264. Total energy = 1128.2134 kcal/mol (1123.5670 without restraints) Performing minimization step: 3265. Total energy = 1128.0140 kcal/mol (1123.3692 without restraints) Performing minimization step: 3266. Total energy = 1127.8145 kcal/mol (1123.1713 without restraints) Performing minimization step: 3267. Total energy = 1127.6151 kcal/mol (1122.9734 without restraints) Performing minimization step: 3268. Total energy = 1127.4156 kcal/mol (1122.7755 without restraints) Performing minimization step: 3269. Total energy = 1127.2161 kcal/mol (1122.5776 without restraints) Performing minimization step: 3270. Total energy = 1127.0166 kcal/mol (1122.3797 without restraints) Performing minimization step: 3271. Total energy = 1126.8171 kcal/mol (1122.1817 without restraints) Performing minimization step: 3272. Total energy = 1126.6176 kcal/mol (1121.9838 without restraints) Performing minimization step: 3273. Total energy = 1126.4183 kcal/mol (1121.7861 without restraints) Performing minimization step: 3274. Total energy = 1126.2189 kcal/mol (1121.5882 without restraints) Performing minimization step: 3275. Total energy = 1126.0197 kcal/mol (1121.3906 without restraints) Performing minimization step: 3276. Total energy = 1125.8204 kcal/mol (1121.1928 without restraints) Performing minimization step: 3277. Total energy = 1125.6211 kcal/mol (1120.9951 without restraints) Performing minimization step: 3278. Total energy = 1125.4216 kcal/mol (1120.7972 without restraints) Performing minimization step: 3279. Total energy = 1125.2220 kcal/mol (1120.5992 without restraints) Performing minimization step: 3280. Total energy = 1125.0226 kcal/mol (1120.4013 without restraints) Performing minimization step: 3281. Total energy = 1124.8231 kcal/mol (1120.2034 without restraints) Performing minimization step: 3282. Total energy = 1124.6236 kcal/mol (1120.0055 without restraints) Performing minimization step: 3283. Total energy = 1124.4241 kcal/mol (1119.8075 without restraints) Performing minimization step: 3284. Total energy = 1124.2250 kcal/mol (1119.6099 without restraints) Performing minimization step: 3285. Total energy = 1124.0256 kcal/mol (1119.4119 without restraints) Performing minimization step: 3286. Total energy = 1123.8259 kcal/mol (1119.2139 without restraints) Performing minimization step: 3287. Total energy = 1123.6264 kcal/mol (1119.0160 without restraints) Performing minimization step: 3288. Total energy = 1123.4269 kcal/mol (1118.8181 without restraints) Performing minimization step: 3289. Total energy = 1123.2275 kcal/mol (1118.6202 without restraints) Performing minimization step: 3290. Total energy = 1123.0280 kcal/mol (1118.4222 without restraints) Performing minimization step: 3291. Total energy = 1122.8288 kcal/mol (1118.2246 without restraints) Performing minimization step: 3292. Total energy = 1122.6296 kcal/mol (1118.0269 without restraints) Performing minimization step: 3293. Total energy = 1122.4302 kcal/mol (1117.8290 without restraints) Performing minimization step: 3294. Total energy = 1122.2308 kcal/mol (1117.6312 without restraints) Performing minimization step: 3295. Total energy = 1122.0314 kcal/mol (1117.4334 without restraints) Performing minimization step: 3296. Total energy = 1121.8320 kcal/mol (1117.2356 without restraints) Performing minimization step: 3297. Total energy = 1121.6327 kcal/mol (1117.0378 without restraints) Performing minimization step: 3298. Total energy = 1121.4334 kcal/mol (1116.8400 without restraints) Performing minimization step: 3299. Total energy = 1121.2342 kcal/mol (1116.6423 without restraints) Performing minimization step: 3300. Total energy = 1121.0349 kcal/mol (1116.4445 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/97a58f6c/tmp/complex_refx/complex_refx.pdb ...Done. Performing minimization step: 3301. Total energy = 1120.8357 kcal/mol (1116.2468 without restraints) Performing minimization step: 3302. Total energy = 1120.6364 kcal/mol (1116.0491 without restraints) Performing minimization step: 3303. Total energy = 1120.4372 kcal/mol (1115.8515 without restraints) Performing minimization step: 3304. Total energy = 1120.2381 kcal/mol (1115.6538 without restraints) Performing minimization step: 3305. Total energy = 1120.0394 kcal/mol (1115.4567 without restraints) Performing minimization step: 3306. Total energy = 1119.8403 kcal/mol (1115.2591 without restraints) Performing minimization step: 3307. Total energy = 1119.6412 kcal/mol (1115.0615 without restraints) Performing minimization step: 3308. Total energy = 1119.4421 kcal/mol (1114.8640 without restraints) Performing minimization step: 3309. Total energy = 1119.2431 kcal/mol (1114.6665 without restraints) Performing minimization step: 3310. Total energy = 1119.0441 kcal/mol (1114.4690 without restraints) Performing minimization step: 3311. Total energy = 1118.8453 kcal/mol (1114.2718 without restraints) Performing minimization step: 3312. Total energy = 1118.6466 kcal/mol (1114.0746 without restraints) Performing minimization step: 3313. Total energy = 1118.4479 kcal/mol (1113.8774 without restraints) Performing minimization step: 3314. Total energy = 1118.2491 kcal/mol (1113.6801 without restraints) Performing minimization step: 3315. Total energy = 1118.0503 kcal/mol (1113.4828 without restraints) Performing minimization step: 3316. Total energy = 1117.8515 kcal/mol (1113.2855 without restraints) Performing minimization step: 3317. Total energy = 1117.6526 kcal/mol (1113.0881 without restraints) Performing minimization step: 3318. Total energy = 1117.4541 kcal/mol (1112.8911 without restraints) Performing minimization step: 3319. Total energy = 1117.2554 kcal/mol (1112.6940 without restraints) Performing minimization step: 3320. Total energy = 1117.0570 kcal/mol (1112.4971 without restraints) Performing minimization step: 3321. Total energy = 1116.8585 kcal/mol (1112.3002 without restraints) Performing minimization step: 3322. Total energy = 1116.6601 kcal/mol (1112.1032 without restraints) Performing minimization step: 3323. Total energy = 1116.4614 kcal/mol (1111.9060 without restraints) Performing minimization step: 3324. Total energy = 1116.2632 kcal/mol (1111.7093 without restraints) Performing minimization step: 3325. Total energy = 1116.0648 kcal/mol (1111.5124 without restraints) Performing minimization step: 3326. Total energy = 1115.8664 kcal/mol (1111.3156 without restraints) Performing minimization step: 3327. Total energy = 1115.6682 kcal/mol (1111.1190 without restraints) Performing minimization step: 3328. Total energy = 1115.4703 kcal/mol (1110.9225 without restraints) Performing minimization step: 3329. Total energy = 1115.2721 kcal/mol (1110.7258 without restraints) Performing minimization step: 3330. Total energy = 1115.0739 kcal/mol (1110.5291 without restraints) Performing minimization step: 3331. Total energy = 1114.8759 kcal/mol (1110.3327 without restraints) Performing minimization step: 3332. Total energy = 1114.6780 kcal/mol (1110.1361 without restraints) Performing minimization step: 3333. Total energy = 1114.4800 kcal/mol (1109.9396 without restraints) Performing minimization step: 3334. Total energy = 1114.2823 kcal/mol (1109.7434 without restraints) Performing minimization step: 3335. Total energy = 1114.0844 kcal/mol (1109.5471 without restraints) Performing minimization step: 3336. Total energy = 1113.8866 kcal/mol (1109.3507 without restraints) Performing minimization step: 3337. Total energy = 1113.6888 kcal/mol (1109.1545 without restraints) Performing minimization step: 3338. Total energy = 1113.4909 kcal/mol (1108.9580 without restraints) Performing minimization step: 3339. Total energy = 1113.2932 kcal/mol (1108.7618 without restraints) Performing minimization step: 3340. Total energy = 1113.0956 kcal/mol (1108.5657 without restraints) Performing minimization step: 3341. Total energy = 1112.8981 kcal/mol (1108.3699 without restraints) Performing minimization step: 3342. Total energy = 1112.7008 kcal/mol (1108.1739 without restraints) Performing minimization step: 3343. Total energy = 1112.5034 kcal/mol (1107.9780 without restraints) Performing minimization step: 3344. Total energy = 1112.3060 kcal/mol (1107.7822 without restraints) Performing minimization step: 3345. Total energy = 1112.1083 kcal/mol (1107.5859 without restraints) Performing minimization step: 3346. Total energy = 1111.9113 kcal/mol (1107.3904 without restraints) Performing minimization step: 3347. Total energy = 1111.7142 kcal/mol (1107.1948 without restraints) Performing minimization step: 3348. Total energy = 1111.5171 kcal/mol (1106.9992 without restraints) Performing minimization step: 3349. Total energy = 1111.3201 kcal/mol (1106.8037 without restraints) Performing minimization step: 3350. Total energy = 1111.1233 kcal/mol (1106.6084 without restraints) Performing minimization step: 3351. Total energy = 1110.9265 kcal/mol (1106.4131 without restraints) Performing minimization step: 3352. Total energy = 1110.7298 kcal/mol (1106.2178 without restraints) Performing minimization step: 3353. Total energy = 1110.5331 kcal/mol (1106.0228 without restraints) Performing minimization step: 3354. Total energy = 1110.3366 kcal/mol (1105.8276 without restraints) Performing minimization step: 3355. Total energy = 1110.1400 kcal/mol (1105.6325 without restraints) Performing minimization step: 3356. Total energy = 1109.9435 kcal/mol (1105.4375 without restraints) Performing minimization step: 3357. Total energy = 1109.7474 kcal/mol (1105.2428 without restraints) Performing minimization step: 3358. Total energy = 1109.5513 kcal/mol (1105.0483 without restraints) Performing minimization step: 3359. Total energy = 1109.3551 kcal/mol (1104.8535 without restraints) Performing minimization step: 3360. Total energy = 1109.1589 kcal/mol (1104.6588 without restraints) Performing minimization step: 3361. Total energy = 1108.9629 kcal/mol (1104.4643 without restraints) Performing minimization step: 3362. Total energy = 1108.7669 kcal/mol (1104.2698 without restraints) Performing minimization step: 3363. Total energy = 1108.5710 kcal/mol (1104.0753 without restraints) Performing minimization step: 3364. Total energy = 1108.3751 kcal/mol (1103.8809 without restraints) Performing minimization step: 3365. Total energy = 1108.1792 kcal/mol (1103.6865 without restraints) Performing minimization step: 3366. Total energy = 1107.9837 kcal/mol (1103.4925 without restraints) Performing minimization step: 3367. Total energy = 1107.7881 kcal/mol (1103.2984 without restraints) Performing minimization step: 3368. Total energy = 1107.5926 kcal/mol (1103.1045 without restraints) Performing minimization step: 3369. Total energy = 1107.3974 kcal/mol (1102.9106 without restraints) Performing minimization step: 3370. Total energy = 1107.2020 kcal/mol (1102.7167 without restraints) Performing minimization step: 3371. Total energy = 1107.0069 kcal/mol (1102.5230 without restraints) Performing minimization step: 3372. Total energy = 1106.8119 kcal/mol (1102.3296 without restraints) Performing minimization step: 3373. Total energy = 1106.6171 kcal/mol (1102.1362 without restraints) Performing minimization step: 3374. Total energy = 1106.4223 kcal/mol (1101.9430 without restraints) Performing minimization step: 3375. Total energy = 1106.2276 kcal/mol (1101.7497 without restraints) Performing minimization step: 3376. Total energy = 1106.0327 kcal/mol (1101.5562 without restraints) Performing minimization step: 3377. Total energy = 1105.8383 kcal/mol (1101.3633 without restraints) Performing minimization step: 3378. Total energy = 1105.6439 kcal/mol (1101.1705 without restraints) Performing minimization step: 3379. Total energy = 1105.4496 kcal/mol (1100.9776 without restraints) Performing minimization step: 3380. Total energy = 1105.2553 kcal/mol (1100.7847 without restraints) Performing minimization step: 3381. Total energy = 1105.0610 kcal/mol (1100.5919 without restraints) Performing minimization step: 3382. Total energy = 1104.8672 kcal/mol (1100.3995 without restraints) Performing minimization step: 3383. Total energy = 1104.6731 kcal/mol (1100.2070 without restraints) Performing minimization step: 3384. Total energy = 1104.4793 kcal/mol (1100.0145 without restraints) Performing minimization step: 3385. Total energy = 1104.2854 kcal/mol (1099.8222 without restraints) Performing minimization step: 3386. Total energy = 1104.0917 kcal/mol (1099.6300 without restraints) Performing minimization step: 3387. Total energy = 1103.8981 kcal/mol (1099.4378 without restraints) Performing minimization step: 3388. Total energy = 1103.7049 kcal/mol (1099.2460 without restraints) Performing minimization step: 3389. Total energy = 1103.5114 kcal/mol (1099.0540 without restraints) Performing minimization step: 3390. Total energy = 1103.3181 kcal/mol (1098.8622 without restraints) Performing minimization step: 3391. Total energy = 1103.1250 kcal/mol (1098.6705 without restraints) Performing minimization step: 3392. Total energy = 1102.9322 kcal/mol (1098.4792 without restraints) Performing minimization step: 3393. Total energy = 1102.7396 kcal/mol (1098.2880 without restraints) Performing minimization step: 3394. Total energy = 1102.5470 kcal/mol (1098.0970 without restraints) Performing minimization step: 3395. Total energy = 1102.3544 kcal/mol (1097.9058 without restraints) Performing minimization step: 3396. Total energy = 1102.1619 kcal/mol (1097.7148 without restraints) Performing minimization step: 3397. Total energy = 1101.9698 kcal/mol (1097.5242 without restraints) Performing minimization step: 3398. Total energy = 1101.7778 kcal/mol (1097.3336 without restraints) Performing minimization step: 3399. Total energy = 1101.5856 kcal/mol (1097.1429 without restraints) Performing minimization step: 3400. Total energy = 1101.3936 kcal/mol (1096.9524 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/97a58f6c/tmp/complex_refx/complex_refx.pdb ...Done. Performing minimization step: 3401. Total energy = 1101.2016 kcal/mol (1096.7618 without restraints) Performing minimization step: 3402. Total energy = 1101.0099 kcal/mol (1096.5715 without restraints) Performing minimization step: 3403. Total energy = 1100.8183 kcal/mol (1096.3814 without restraints) Performing minimization step: 3404. Total energy = 1100.6265 kcal/mol (1096.1911 without restraints) Performing minimization step: 3405. Total energy = 1100.4352 kcal/mol (1096.0013 without restraints) Performing minimization step: 3406. Total energy = 1100.2440 kcal/mol (1095.8115 without restraints) Performing minimization step: 3407. Total energy = 1100.0529 kcal/mol (1095.6219 without restraints) Performing minimization step: 3408. Total energy = 1099.8620 kcal/mol (1095.4325 without restraints) Performing minimization step: 3409. Total energy = 1099.6714 kcal/mol (1095.2433 without restraints) Performing minimization step: 3410. Total energy = 1099.4808 kcal/mol (1095.0541 without restraints) Performing minimization step: 3411. Total energy = 1099.2902 kcal/mol (1094.8651 without restraints) Performing minimization step: 3412. Total energy = 1099.0997 kcal/mol (1094.6760 without restraints) Performing minimization step: 3413. Total energy = 1098.9095 kcal/mol (1094.4873 without restraints) Performing minimization step: 3414. Total energy = 1098.7194 kcal/mol (1094.2987 without restraints) Performing minimization step: 3415. Total energy = 1098.5295 kcal/mol (1094.1102 without restraints) Performing minimization step: 3416. Total energy = 1098.3398 kcal/mol (1093.9220 without restraints) Performing minimization step: 3417. Total energy = 1098.1502 kcal/mol (1093.7338 without restraints) Performing minimization step: 3418. Total energy = 1097.9606 kcal/mol (1093.5457 without restraints) Performing minimization step: 3419. Total energy = 1097.7713 kcal/mol (1093.3578 without restraints) Performing minimization step: 3420. Total energy = 1097.5820 kcal/mol (1093.1701 without restraints) Performing minimization step: 3421. Total energy = 1097.3931 kcal/mol (1092.9825 without restraints) Performing minimization step: 3422. Total energy = 1097.2042 kcal/mol (1092.7952 without restraints) Performing minimization step: 3423. Total energy = 1097.0156 kcal/mol (1092.6079 without restraints) Performing minimization step: 3424. Total energy = 1096.8270 kcal/mol (1092.4209 without restraints) Performing minimization step: 3425. Total energy = 1096.6387 kcal/mol (1092.2340 without restraints) Performing minimization step: 3426. Total energy = 1096.4507 kcal/mol (1092.0477 without restraints) Performing minimization step: 3427. Total energy = 1096.2629 kcal/mol (1091.8611 without restraints) Performing minimization step: 3428. Total energy = 1096.0750 kcal/mol (1091.6747 without restraints) Performing minimization step: 3429. Total energy = 1095.8875 kcal/mol (1091.4887 without restraints) Performing minimization step: 3430. Total energy = 1095.7000 kcal/mol (1091.3026 without restraints) Performing minimization step: 3431. Total energy = 1095.5127 kcal/mol (1091.1168 without restraints) Performing minimization step: 3432. Total energy = 1095.3255 kcal/mol (1090.9313 without restraints) Performing minimization step: 3433. Total energy = 1095.1385 kcal/mol (1090.7455 without restraints) Performing minimization step: 3434. Total energy = 1094.9519 kcal/mol (1090.5603 without restraints) Performing minimization step: 3435. Total energy = 1094.7652 kcal/mol (1090.3752 without restraints) Performing minimization step: 3436. Total energy = 1094.5786 kcal/mol (1090.1900 without restraints) Performing minimization step: 3437. Total energy = 1094.3925 kcal/mol (1090.0054 without restraints) Performing minimization step: 3438. Total energy = 1094.2064 kcal/mol (1089.8207 without restraints) Performing minimization step: 3439. Total energy = 1094.0205 kcal/mol (1089.6363 without restraints) Performing minimization step: 3440. Total energy = 1093.8346 kcal/mol (1089.4518 without restraints) Performing minimization step: 3441. Total energy = 1093.6490 kcal/mol (1089.2677 without restraints) Performing minimization step: 3442. Total energy = 1093.4636 kcal/mol (1089.0838 without restraints) Performing minimization step: 3443. Total energy = 1093.2785 kcal/mol (1088.9001 without restraints) Performing minimization step: 3444. Total energy = 1093.0933 kcal/mol (1088.7164 without restraints) Performing minimization step: 3445. Total energy = 1092.9086 kcal/mol (1088.5331 without restraints) Performing minimization step: 3446. Total energy = 1092.7241 kcal/mol (1088.3502 without restraints) Performing minimization step: 3447. Total energy = 1092.5401 kcal/mol (1088.1676 without restraints) Performing minimization step: 3448. Total energy = 1092.3558 kcal/mol (1087.9847 without restraints) Performing minimization step: 3449. Total energy = 1092.1716 kcal/mol (1087.8021 without restraints) Performing minimization step: 3450. Total energy = 1091.9881 kcal/mol (1087.6201 without restraints) Performing minimization step: 3451. Total energy = 1091.8046 kcal/mol (1087.4380 without restraints) Performing minimization step: 3452. Total energy = 1091.6211 kcal/mol (1087.2560 without restraints) Performing minimization step: 3453. Total energy = 1091.4379 kcal/mol (1087.0742 without restraints) Performing minimization step: 3454. Total energy = 1091.2549 kcal/mol (1086.8927 without restraints) Performing minimization step: 3455. Total energy = 1091.0720 kcal/mol (1086.7113 without restraints) Performing minimization step: 3456. Total energy = 1090.8902 kcal/mol (1086.5309 without restraints) Performing minimization step: 3457. Total energy = 1090.7077 kcal/mol (1086.3499 without restraints) Performing minimization step: 3458. Total energy = 1090.5255 kcal/mol (1086.1691 without restraints) Performing minimization step: 3459. Total energy = 1090.3434 kcal/mol (1085.9884 without restraints) Performing minimization step: 3460. Total energy = 1090.1617 kcal/mol (1085.8083 without restraints) Performing minimization step: 3461. Total energy = 1089.9801 kcal/mol (1085.6282 without restraints) Performing minimization step: 3462. Total energy = 1089.7988 kcal/mol (1085.4484 without restraints) Performing minimization step: 3463. Total energy = 1089.6176 kcal/mol (1085.2686 without restraints) Performing minimization step: 3464. Total energy = 1089.4367 kcal/mol (1085.0892 without restraints) Performing minimization step: 3465. Total energy = 1089.2559 kcal/mol (1084.9099 without restraints) Performing minimization step: 3466. Total energy = 1089.0754 kcal/mol (1084.7308 without restraints) Performing minimization step: 3467. Total energy = 1088.8951 kcal/mol (1084.5520 without restraints) Performing minimization step: 3468. Total energy = 1088.7150 kcal/mol (1084.3734 without restraints) Performing minimization step: 3469. Total energy = 1088.5353 kcal/mol (1084.1952 without restraints) Performing minimization step: 3470. Total energy = 1088.3558 kcal/mol (1084.0172 without restraints) Performing minimization step: 3471. Total energy = 1088.1765 kcal/mol (1083.8393 without restraints) Performing minimization step: 3472. Total energy = 1087.9970 kcal/mol (1083.6613 without restraints) Performing minimization step: 3473. Total energy = 1087.8180 kcal/mol (1083.4838 without restraints) Performing minimization step: 3474. Total energy = 1087.6393 kcal/mol (1083.3065 without restraints) Performing minimization step: 3475. Total energy = 1087.4610 kcal/mol (1083.1297 without restraints) Performing minimization step: 3476. Total energy = 1087.2829 kcal/mol (1082.9531 without restraints) Performing minimization step: 3477. Total energy = 1087.1048 kcal/mol (1082.7765 without restraints) Performing minimization step: 3478. Total energy = 1086.9272 kcal/mol (1082.6003 without restraints) Performing minimization step: 3479. Total energy = 1086.7496 kcal/mol (1082.4243 without restraints) Performing minimization step: 3480. Total energy = 1086.5722 kcal/mol (1082.2484 without restraints) Performing minimization step: 3481. Total energy = 1086.3951 kcal/mol (1082.0728 without restraints) Performing minimization step: 3482. Total energy = 1086.2182 kcal/mol (1081.8973 without restraints) Performing minimization step: 3483. Total energy = 1086.0415 kcal/mol (1081.7221 without restraints) Performing minimization step: 3484. Total energy = 1085.8650 kcal/mol (1081.5471 without restraints) Performing minimization step: 3485. Total energy = 1085.6895 kcal/mol (1081.3730 without restraints) Performing minimization step: 3486. Total energy = 1085.5137 kcal/mol (1081.1986 without restraints) Performing minimization step: 3487. Total energy = 1085.3378 kcal/mol (1081.0243 without restraints) Performing minimization step: 3488. Total energy = 1085.1625 kcal/mol (1080.8506 without restraints) Performing minimization step: 3489. Total energy = 1084.9873 kcal/mol (1080.6768 without restraints) Performing minimization step: 3490. Total energy = 1084.8123 kcal/mol (1080.5033 without restraints) Performing minimization step: 3491. Total energy = 1084.6375 kcal/mol (1080.3300 without restraints) Performing minimization step: 3492. Total energy = 1084.4633 kcal/mol (1080.1573 without restraints) Performing minimization step: 3493. Total energy = 1084.2890 kcal/mol (1079.9844 without restraints) Performing minimization step: 3494. Total energy = 1084.1149 kcal/mol (1079.8118 without restraints) Performing minimization step: 3495. Total energy = 1083.9412 kcal/mol (1079.6397 without restraints) Performing minimization step: 3496. Total energy = 1083.7676 kcal/mol (1079.4675 without restraints) Performing minimization step: 3497. Total energy = 1083.5943 kcal/mol (1079.2957 without restraints) Performing minimization step: 3498. Total energy = 1083.4211 kcal/mol (1079.1240 without restraints) Performing minimization step: 3499. Total energy = 1083.2489 kcal/mol (1078.9534 without restraints) Performing minimization step: 3500. Total energy = 1083.0762 kcal/mol (1078.7820 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/97a58f6c/tmp/complex_refx/complex_refx.pdb ...Done. Performing minimization step: 3501. Total energy = 1082.9038 kcal/mol (1078.6112 without restraints) Performing minimization step: 3502. Total energy = 1082.7319 kcal/mol (1078.4408 without restraints) Performing minimization step: 3503. Total energy = 1082.5600 kcal/mol (1078.2704 without restraints) Performing minimization step: 3504. Total energy = 1082.3884 kcal/mol (1078.1003 without restraints) Performing minimization step: 3505. Total energy = 1082.2173 kcal/mol (1077.9306 without restraints) Performing minimization step: 3506. Total energy = 1082.0461 kcal/mol (1077.7610 without restraints) Performing minimization step: 3507. Total energy = 1081.8754 kcal/mol (1077.5918 without restraints) Performing minimization step: 3508. Total energy = 1081.7046 kcal/mol (1077.4225 without restraints) Performing minimization step: 3509. Total energy = 1081.5340 kcal/mol (1077.2534 without restraints) Performing minimization step: 3510. Total energy = 1081.3638 kcal/mol (1077.0847 without restraints) Performing minimization step: 3511. Total energy = 1081.1939 kcal/mol (1076.9163 without restraints) Performing minimization step: 3512. Total energy = 1081.0243 kcal/mol (1076.7482 without restraints) Performing minimization step: 3513. Total energy = 1080.8549 kcal/mol (1076.5803 without restraints) Performing minimization step: 3514. Total energy = 1080.6858 kcal/mol (1076.4127 without restraints) Performing minimization step: 3515. Total energy = 1080.5168 kcal/mol (1076.2452 without restraints) Performing minimization step: 3516. Total energy = 1080.3480 kcal/mol (1076.0779 without restraints) Performing minimization step: 3517. Total energy = 1080.1796 kcal/mol (1075.9110 without restraints) Performing minimization step: 3518. Total energy = 1080.0119 kcal/mol (1075.7448 without restraints) Performing minimization step: 3519. Total energy = 1079.8439 kcal/mol (1075.5784 without restraints) Performing minimization step: 3520. Total energy = 1079.6763 kcal/mol (1075.4123 without restraints) Performing minimization step: 3521. Total energy = 1079.5092 kcal/mol (1075.2466 without restraints) Performing minimization step: 3522. Total energy = 1079.3422 kcal/mol (1075.0812 without restraints) Performing minimization step: 3523. Total energy = 1079.1753 kcal/mol (1074.9158 without restraints) Performing minimization step: 3524. Total energy = 1079.0086 kcal/mol (1074.7506 without restraints) Performing minimization step: 3525. Total energy = 1078.8422 kcal/mol (1074.5857 without restraints) Performing minimization step: 3526. Total energy = 1078.6761 kcal/mol (1074.4211 without restraints) Performing minimization step: 3527. Total energy = 1078.5102 kcal/mol (1074.2567 without restraints) Performing minimization step: 3528. Total energy = 1078.3445 kcal/mol (1074.0926 without restraints) Performing minimization step: 3529. Total energy = 1078.1792 kcal/mol (1073.9288 without restraints) Performing minimization step: 3530. Total energy = 1078.0141 kcal/mol (1073.7652 without restraints) Performing minimization step: 3531. Total energy = 1077.8494 kcal/mol (1073.6021 without restraints) Performing minimization step: 3532. Total energy = 1077.6849 kcal/mol (1073.4390 without restraints) Performing minimization step: 3533. Total energy = 1077.5205 kcal/mol (1073.2763 without restraints) Performing minimization step: 3534. Total energy = 1077.3569 kcal/mol (1073.1140 without restraints) Performing minimization step: 3535. Total energy = 1077.1929 kcal/mol (1072.9516 without restraints) Performing minimization step: 3536. Total energy = 1077.0296 kcal/mol (1072.7898 without restraints) Performing minimization step: 3537. Total energy = 1076.8662 kcal/mol (1072.6279 without restraints) Performing minimization step: 3538. Total energy = 1076.7037 kcal/mol (1072.4670 without restraints) Performing minimization step: 3539. Total energy = 1076.5409 kcal/mol (1072.3056 without restraints) Performing minimization step: 3540. Total energy = 1076.3781 kcal/mol (1072.1443 without restraints) Performing minimization step: 3541. Total energy = 1076.2157 kcal/mol (1071.9835 without restraints) Performing minimization step: 3542. Total energy = 1076.0536 kcal/mol (1071.8229 without restraints) Performing minimization step: 3543. Total energy = 1075.8919 kcal/mol (1071.6628 without restraints) Performing minimization step: 3544. Total energy = 1075.7303 kcal/mol (1071.5027 without restraints) Performing minimization step: 3545. Total energy = 1075.5690 kcal/mol (1071.3429 without restraints) Performing minimization step: 3546. Total energy = 1075.4081 kcal/mol (1071.1836 without restraints) Performing minimization step: 3547. Total energy = 1075.2473 kcal/mol (1071.0242 without restraints) Performing minimization step: 3548. Total energy = 1075.0864 kcal/mol (1070.8650 without restraints) Performing minimization step: 3549. Total energy = 1074.9258 kcal/mol (1070.7059 without restraints) Performing minimization step: 3550. Total energy = 1074.7658 kcal/mol (1070.5473 without restraints) Performing minimization step: 3551. Total energy = 1074.6059 kcal/mol (1070.3890 without restraints) Performing minimization step: 3552. Total energy = 1074.4463 kcal/mol (1070.2310 without restraints) Performing minimization step: 3553. Total energy = 1074.2870 kcal/mol (1070.0731 without restraints) Performing minimization step: 3554. Total energy = 1074.1281 kcal/mol (1069.9158 without restraints) Performing minimization step: 3555. Total energy = 1073.9692 kcal/mol (1069.7585 without restraints) Performing minimization step: 3556. Total energy = 1073.8106 kcal/mol (1069.6014 without restraints) Performing minimization step: 3557. Total energy = 1073.6523 kcal/mol (1069.4446 without restraints) Performing minimization step: 3558. Total energy = 1073.4942 kcal/mol (1069.2881 without restraints) Performing minimization step: 3559. Total energy = 1073.3364 kcal/mol (1069.1318 without restraints) Performing minimization step: 3560. Total energy = 1073.1790 kcal/mol (1068.9759 without restraints) Performing minimization step: 3561. Total energy = 1073.0216 kcal/mol (1068.8201 without restraints) Performing minimization step: 3562. Total energy = 1072.8646 kcal/mol (1068.6646 without restraints) Performing minimization step: 3563. Total energy = 1072.7077 kcal/mol (1068.5092 without restraints) Performing minimization step: 3564. Total energy = 1072.5513 kcal/mol (1068.3544 without restraints) Performing minimization step: 3565. Total energy = 1072.3951 kcal/mol (1068.1998 without restraints) Performing minimization step: 3566. Total energy = 1072.2390 kcal/mol (1068.0452 without restraints) Performing minimization step: 3567. Total energy = 1072.0833 kcal/mol (1067.8911 without restraints) Performing minimization step: 3568. Total energy = 1071.9277 kcal/mol (1067.7370 without restraints) Performing minimization step: 3569. Total energy = 1071.7723 kcal/mol (1067.5833 without restraints) Performing minimization step: 3570. Total energy = 1071.6171 kcal/mol (1067.4295 without restraints) Performing minimization step: 3571. Total energy = 1071.4622 kcal/mol (1067.2761 without restraints) Performing minimization step: 3572. Total energy = 1071.3076 kcal/mol (1067.1231 without restraints) Performing minimization step: 3573. Total energy = 1071.1532 kcal/mol (1066.9703 without restraints) Performing minimization step: 3574. Total energy = 1070.9990 kcal/mol (1066.8176 without restraints) Performing minimization step: 3575. Total energy = 1070.8451 kcal/mol (1066.6653 without restraints) Performing minimization step: 3576. Total energy = 1070.6915 kcal/mol (1066.5132 without restraints) Performing minimization step: 3577. Total energy = 1070.5381 kcal/mol (1066.3613 without restraints) Performing minimization step: 3578. Total energy = 1070.3848 kcal/mol (1066.2096 without restraints) Performing minimization step: 3579. Total energy = 1070.2318 kcal/mol (1066.0582 without restraints) Performing minimization step: 3580. Total energy = 1070.0791 kcal/mol (1065.9070 without restraints) Performing minimization step: 3581. Total energy = 1069.9266 kcal/mol (1065.7561 without restraints) Performing minimization step: 3582. Total energy = 1069.7744 kcal/mol (1065.6054 without restraints) Performing minimization step: 3583. Total energy = 1069.6224 kcal/mol (1065.4549 without restraints) Performing minimization step: 3584. Total energy = 1069.4704 kcal/mol (1065.3046 without restraints) Performing minimization step: 3585. Total energy = 1069.3189 kcal/mol (1065.1546 without restraints) Performing minimization step: 3586. Total energy = 1069.1676 kcal/mol (1065.0048 without restraints) Performing minimization step: 3587. Total energy = 1069.0165 kcal/mol (1064.8553 without restraints) Performing minimization step: 3588. Total energy = 1068.8657 kcal/mol (1064.7061 without restraints) Performing minimization step: 3589. Total energy = 1068.7151 kcal/mol (1064.5570 without restraints) Performing minimization step: 3590. Total energy = 1068.5646 kcal/mol (1064.4079 without restraints) Performing minimization step: 3591. Total energy = 1068.4144 kcal/mol (1064.2594 without restraints) Performing minimization step: 3592. Total energy = 1068.2645 kcal/mol (1064.1111 without restraints) Performing minimization step: 3593. Total energy = 1068.1148 kcal/mol (1063.9629 without restraints) Performing minimization step: 3594. Total energy = 1067.9653 kcal/mol (1063.8151 without restraints) Performing minimization step: 3595. Total energy = 1067.8162 kcal/mol (1063.6674 without restraints) Performing minimization step: 3596. Total energy = 1067.6671 kcal/mol (1063.5200 without restraints) Performing minimization step: 3597. Total energy = 1067.5186 kcal/mol (1063.3733 without restraints) Performing minimization step: 3598. Total energy = 1067.3708 kcal/mol (1063.2268 without restraints) Performing minimization step: 3599. Total energy = 1067.2230 kcal/mol (1063.0806 without restraints) Performing minimization step: 3600. Total energy = 1067.0750 kcal/mol (1062.9341 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/97a58f6c/tmp/complex_refx/complex_refx.pdb ...Done. Performing minimization step: 3601. Total energy = 1066.9271 kcal/mol (1062.7878 without restraints) Performing minimization step: 3602. Total energy = 1066.7797 kcal/mol (1062.6420 without restraints) Performing minimization step: 3603. Total energy = 1066.6323 kcal/mol (1062.4961 without restraints) Performing minimization step: 3604. Total energy = 1066.4852 kcal/mol (1062.3506 without restraints) Performing minimization step: 3605. Total energy = 1066.3387 kcal/mol (1062.2056 without restraints) Performing minimization step: 3606. Total energy = 1066.1919 kcal/mol (1062.0605 without restraints) Performing minimization step: 3607. Total energy = 1066.0454 kcal/mol (1061.9156 without restraints) Performing minimization step: 3608. Total energy = 1065.8992 kcal/mol (1061.7709 without restraints) Performing minimization step: 3609. Total energy = 1065.7529 kcal/mol (1061.6262 without restraints) Performing minimization step: 3610. Total energy = 1065.6071 kcal/mol (1061.4819 without restraints) Performing minimization step: 3611. Total energy = 1065.4615 kcal/mol (1061.3379 without restraints) Performing minimization step: 3612. Total energy = 1065.3160 kcal/mol (1061.1940 without restraints) Performing minimization step: 3613. Total energy = 1065.1713 kcal/mol (1061.0510 without restraints) Performing minimization step: 3614. Total energy = 1065.0267 kcal/mol (1060.9079 without restraints) Performing minimization step: 3615. Total energy = 1064.8820 kcal/mol (1060.7647 without restraints) Performing minimization step: 3616. Total energy = 1064.7375 kcal/mol (1060.6218 without restraints) Performing minimization step: 3617. Total energy = 1064.5934 kcal/mol (1060.4794 without restraints) Performing minimization step: 3618. Total energy = 1064.4492 kcal/mol (1060.3366 without restraints) Performing minimization step: 3619. Total energy = 1064.3056 kcal/mol (1060.1946 without restraints) Performing minimization step: 3620. Total energy = 1064.1617 kcal/mol (1060.0523 without restraints) Performing minimization step: 3621. Total energy = 1064.0183 kcal/mol (1059.9105 without restraints) Performing minimization step: 3622. Total energy = 1063.8749 kcal/mol (1059.7687 without restraints) Performing minimization step: 3623. Total energy = 1063.7320 kcal/mol (1059.6273 without restraints) Performing minimization step: 3624. Total energy = 1063.5892 kcal/mol (1059.4861 without restraints) Performing minimization step: 3625. Total energy = 1063.4463 kcal/mol (1059.3449 without restraints) Performing minimization step: 3626. Total energy = 1063.3040 kcal/mol (1059.2041 without restraints) Performing minimization step: 3627. Total energy = 1063.1619 kcal/mol (1059.0636 without restraints) Performing minimization step: 3628. Total energy = 1063.0200 kcal/mol (1058.9232 without restraints) Performing minimization step: 3629. Total energy = 1062.8784 kcal/mol (1058.7833 without restraints) Performing minimization step: 3630. Total energy = 1062.7370 kcal/mol (1058.6434 without restraints) Performing minimization step: 3631. Total energy = 1062.5955 kcal/mol (1058.5035 without restraints) Performing minimization step: 3632. Total energy = 1062.4544 kcal/mol (1058.3640 without restraints) Performing minimization step: 3633. Total energy = 1062.3138 kcal/mol (1058.2250 without restraints) Performing minimization step: 3634. Total energy = 1062.1731 kcal/mol (1058.0859 without restraints) Performing minimization step: 3635. Total energy = 1062.0327 kcal/mol (1057.9470 without restraints) Performing minimization step: 3636. Total energy = 1061.8924 kcal/mol (1057.8084 without restraints) Performing minimization step: 3637. Total energy = 1061.7529 kcal/mol (1057.6706 without restraints) Performing minimization step: 3638. Total energy = 1061.6133 kcal/mol (1057.5324 without restraints) Performing minimization step: 3639. Total energy = 1061.4737 kcal/mol (1057.3944 without restraints) Performing minimization step: 3640. Total energy = 1061.3343 kcal/mol (1057.2565 without restraints) Performing minimization step: 3641. Total energy = 1061.1950 kcal/mol (1057.1189 without restraints) Performing minimization step: 3642. Total energy = 1061.0564 kcal/mol (1056.9819 without restraints) Performing minimization step: 3643. Total energy = 1060.9176 kcal/mol (1056.8447 without restraints) Performing minimization step: 3644. Total energy = 1060.7790 kcal/mol (1056.7076 without restraints) Performing minimization step: 3645. Total energy = 1060.6406 kcal/mol (1056.5708 without restraints) Performing minimization step: 3646. Total energy = 1060.5024 kcal/mol (1056.4342 without restraints) Performing minimization step: 3647. Total energy = 1060.3644 kcal/mol (1056.2978 without restraints) Performing minimization step: 3648. Total energy = 1060.2266 kcal/mol (1056.1616 without restraints) Performing minimization step: 3649. Total energy = 1060.0889 kcal/mol (1056.0256 without restraints) Performing minimization step: 3650. Total energy = 1059.9515 kcal/mol (1055.8897 without restraints) Performing minimization step: 3651. Total energy = 1059.8143 kcal/mol (1055.7541 without restraints) Performing minimization step: 3652. Total energy = 1059.6773 kcal/mol (1055.6187 without restraints) Performing minimization step: 3653. Total energy = 1059.5405 kcal/mol (1055.4835 without restraints) Performing minimization step: 3654. Total energy = 1059.4039 kcal/mol (1055.3484 without restraints) Performing minimization step: 3655. Total energy = 1059.2676 kcal/mol (1055.2138 without restraints) Performing minimization step: 3656. Total energy = 1059.1314 kcal/mol (1055.0792 without restraints) Performing minimization step: 3657. Total energy = 1058.9954 kcal/mol (1054.9448 without restraints) Performing minimization step: 3658. Total energy = 1058.8592 kcal/mol (1054.8100 without restraints) Performing minimization step: 3659. Total energy = 1058.7234 kcal/mol (1054.6760 without restraints) Performing minimization step: 3660. Total energy = 1058.5880 kcal/mol (1054.5421 without restraints) Performing minimization step: 3661. Total energy = 1058.4527 kcal/mol (1054.4085 without restraints) Performing minimization step: 3662. Total energy = 1058.3177 kcal/mol (1054.2751 without restraints) Performing minimization step: 3663. Total energy = 1058.1828 kcal/mol (1054.1417 without restraints) Performing minimization step: 3664. Total energy = 1058.0484 kcal/mol (1054.0089 without restraints) Performing minimization step: 3665. Total energy = 1057.9141 kcal/mol (1053.8762 without restraints) Performing minimization step: 3666. Total energy = 1057.7798 kcal/mol (1053.7435 without restraints) Performing minimization step: 3667. Total energy = 1057.6456 kcal/mol (1053.6110 without restraints) Performing minimization step: 3668. Total energy = 1057.5116 kcal/mol (1053.4785 without restraints) Performing minimization step: 3669. Total energy = 1057.3778 kcal/mol (1053.3464 without restraints) Performing minimization step: 3670. Total energy = 1057.2445 kcal/mol (1053.2147 without restraints) Performing minimization step: 3671. Total energy = 1057.1111 kcal/mol (1053.0830 without restraints) Performing minimization step: 3672. Total energy = 1056.9779 kcal/mol (1052.9514 without restraints) Performing minimization step: 3673. Total energy = 1056.8448 kcal/mol (1052.8198 without restraints) Performing minimization step: 3674. Total energy = 1056.7120 kcal/mol (1052.6885 without restraints) Performing minimization step: 3675. Total energy = 1056.5794 kcal/mol (1052.5575 without restraints) Performing minimization step: 3676. Total energy = 1056.4470 kcal/mol (1052.4267 without restraints) Performing minimization step: 3677. Total energy = 1056.3150 kcal/mol (1052.2963 without restraints) Performing minimization step: 3678. Total energy = 1056.1831 kcal/mol (1052.1661 without restraints) Performing minimization step: 3679. Total energy = 1056.0517 kcal/mol (1052.0363 without restraints) Performing minimization step: 3680. Total energy = 1055.9200 kcal/mol (1051.9062 without restraints) Performing minimization step: 3681. Total energy = 1055.7885 kcal/mol (1051.7762 without restraints) Performing minimization step: 3682. Total energy = 1055.6572 kcal/mol (1051.6467 without restraints) Performing minimization step: 3683. Total energy = 1055.5262 kcal/mol (1051.5172 without restraints) Performing minimization step: 3684. Total energy = 1055.3954 kcal/mol (1051.3880 without restraints) Performing minimization step: 3685. Total energy = 1055.2646 kcal/mol (1051.2588 without restraints) Performing minimization step: 3686. Total energy = 1055.1342 kcal/mol (1051.1300 without restraints) Performing minimization step: 3687. Total energy = 1055.0037 kcal/mol (1051.0011 without restraints) Performing minimization step: 3688. Total energy = 1054.8735 kcal/mol (1050.8725 without restraints) Performing minimization step: 3689. Total energy = 1054.7434 kcal/mol (1050.7441 without restraints) Performing minimization step: 3690. Total energy = 1054.6136 kcal/mol (1050.6158 without restraints) Performing minimization step: 3691. Total energy = 1054.4841 kcal/mol (1050.4879 without restraints) Performing minimization step: 3692. Total energy = 1054.3545 kcal/mol (1050.3600 without restraints) Performing minimization step: 3693. Total energy = 1054.2249 kcal/mol (1050.2320 without restraints) Performing minimization step: 3694. Total energy = 1054.0959 kcal/mol (1050.1046 without restraints) Performing minimization step: 3695. Total energy = 1053.9669 kcal/mol (1049.9771 without restraints) Performing minimization step: 3696. Total energy = 1053.8380 kcal/mol (1049.8499 without restraints) Performing minimization step: 3697. Total energy = 1053.7098 kcal/mol (1049.7233 without restraints) Performing minimization step: 3698. Total energy = 1053.5810 kcal/mol (1049.5960 without restraints) Performing minimization step: 3699. Total energy = 1053.4521 kcal/mol (1049.4688 without restraints) Performing minimization step: 3700. Total energy = 1053.3242 kcal/mol (1049.3425 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/97a58f6c/tmp/complex_refx/complex_refx.pdb ...Done. Performing minimization step: 3701. Total energy = 1053.1963 kcal/mol (1049.2162 without restraints) Performing minimization step: 3702. Total energy = 1053.0685 kcal/mol (1049.0900 without restraints) Performing minimization step: 3703. Total energy = 1052.9409 kcal/mol (1048.9640 without restraints) Performing minimization step: 3704. Total energy = 1052.8134 kcal/mol (1048.8381 without restraints) Performing minimization step: 3705. Total energy = 1052.6862 kcal/mol (1048.7125 without restraints) Performing minimization step: 3706. Total energy = 1052.5593 kcal/mol (1048.5874 without restraints) Performing minimization step: 3707. Total energy = 1052.4325 kcal/mol (1048.4621 without restraints) Performing minimization step: 3708. Total energy = 1052.3057 kcal/mol (1048.3369 without restraints) Performing minimization step: 3709. Total energy = 1052.1791 kcal/mol (1048.2119 without restraints) Performing minimization step: 3710. Total energy = 1052.0526 kcal/mol (1048.0870 without restraints) Performing minimization step: 3711. Total energy = 1051.9268 kcal/mol (1047.9628 without restraints) Performing minimization step: 3712. Total energy = 1051.8007 kcal/mol (1047.8383 without restraints) Performing minimization step: 3713. Total energy = 1051.6747 kcal/mol (1047.7139 without restraints) Performing minimization step: 3714. Total energy = 1051.5489 kcal/mol (1047.5898 without restraints) Performing minimization step: 3715. Total energy = 1051.4233 kcal/mol (1047.4657 without restraints) Performing minimization step: 3716. Total energy = 1051.2978 kcal/mol (1047.3418 without restraints) Performing minimization step: 3717. Total energy = 1051.1725 kcal/mol (1047.2181 without restraints) Performing minimization step: 3718. Total energy = 1051.0473 kcal/mol (1047.0946 without restraints) Performing minimization step: 3719. Total energy = 1050.9225 kcal/mol (1046.9714 without restraints) Performing minimization step: 3720. Total energy = 1050.7981 kcal/mol (1046.8485 without restraints) Performing minimization step: 3721. Total energy = 1050.6734 kcal/mol (1046.7255 without restraints) Performing minimization step: 3722. Total energy = 1050.5489 kcal/mol (1046.6026 without restraints) Performing minimization step: 3723. Total energy = 1050.4244 kcal/mol (1046.4797 without restraints) Performing minimization step: 3724. Total energy = 1050.3003 kcal/mol (1046.3572 without restraints) Performing minimization step: 3725. Total energy = 1050.1764 kcal/mol (1046.2350 without restraints) Performing minimization step: 3726. Total energy = 1050.0529 kcal/mol (1046.1135 without restraints) Performing minimization step: 3727. Total energy = 1049.9296 kcal/mol (1045.9914 without restraints) Performing minimization step: 3728. Total energy = 1049.8061 kcal/mol (1045.8695 without restraints) Performing minimization step: 3729. Total energy = 1049.6830 kcal/mol (1045.7480 without restraints) Performing minimization step: 3730. Total energy = 1049.5598 kcal/mol (1045.6264 without restraints) Performing minimization step: 3731. Total energy = 1049.4367 kcal/mol (1045.5049 without restraints) Performing minimization step: 3732. Total energy = 1049.3138 kcal/mol (1045.3836 without restraints) Performing minimization step: 3733. Total energy = 1049.1911 kcal/mol (1045.2625 without restraints) Performing minimization step: 3734. Total energy = 1049.0687 kcal/mol (1045.1417 without restraints) Performing minimization step: 3735. Total energy = 1048.9463 kcal/mol (1045.0211 without restraints) Performing minimization step: 3736. Total energy = 1048.8241 kcal/mol (1044.9004 without restraints) Performing minimization step: 3737. Total energy = 1048.7021 kcal/mol (1044.7801 without restraints) Performing minimization step: 3738. Total energy = 1048.5803 kcal/mol (1044.6598 without restraints) Performing minimization step: 3739. Total energy = 1048.4582 kcal/mol (1044.5393 without restraints) Performing minimization step: 3740. Total energy = 1048.3365 kcal/mol (1044.4192 without restraints) Performing minimization step: 3741. Total energy = 1048.2150 kcal/mol (1044.2993 without restraints) Performing minimization step: 3742. Total energy = 1048.0940 kcal/mol (1044.1799 without restraints) Performing minimization step: 3743. Total energy = 1047.9728 kcal/mol (1044.0603 without restraints) Performing minimization step: 3744. Total energy = 1047.8518 kcal/mol (1043.9409 without restraints) Performing minimization step: 3745. Total energy = 1047.7308 kcal/mol (1043.8216 without restraints) Performing minimization step: 3746. Total energy = 1047.6103 kcal/mol (1043.7027 without restraints) Performing minimization step: 3747. Total energy = 1047.4897 kcal/mol (1043.5837 without restraints) Performing minimization step: 3748. Total energy = 1047.3693 kcal/mol (1043.4649 without restraints) Performing minimization step: 3749. Total energy = 1047.2490 kcal/mol (1043.3462 without restraints) Performing minimization step: 3750. Total energy = 1047.1288 kcal/mol (1043.2276 without restraints) Performing minimization step: 3751. Total energy = 1047.0088 kcal/mol (1043.1092 without restraints) Performing minimization step: 3752. Total energy = 1046.8886 kcal/mol (1042.9908 without restraints) Performing minimization step: 3753. Total energy = 1046.7692 kcal/mol (1042.8729 without restraints) Performing minimization step: 3754. Total energy = 1046.6496 kcal/mol (1042.7549 without restraints) Performing minimization step: 3755. Total energy = 1046.5302 kcal/mol (1042.6371 without restraints) Performing minimization step: 3756. Total energy = 1046.4111 kcal/mol (1042.5196 without restraints) Performing minimization step: 3757. Total energy = 1046.2925 kcal/mol (1042.4025 without restraints) Performing minimization step: 3758. Total energy = 1046.1733 kcal/mol (1042.2849 without restraints) Performing minimization step: 3759. Total energy = 1046.0544 kcal/mol (1042.1677 without restraints) Performing minimization step: 3760. Total energy = 1045.9357 kcal/mol (1042.0505 without restraints) Performing minimization step: 3761. Total energy = 1045.8171 kcal/mol (1041.9336 without restraints) Performing minimization step: 3762. Total energy = 1045.6987 kcal/mol (1041.8169 without restraints) Performing minimization step: 3763. Total energy = 1045.5805 kcal/mol (1041.7002 without restraints) Performing minimization step: 3764. Total energy = 1045.4624 kcal/mol (1041.5837 without restraints) Performing minimization step: 3765. Total energy = 1045.3446 kcal/mol (1041.4676 without restraints) Performing minimization step: 3766. Total energy = 1045.2267 kcal/mol (1041.3513 without restraints) Performing minimization step: 3767. Total energy = 1045.1090 kcal/mol (1041.2352 without restraints) Performing minimization step: 3768. Total energy = 1044.9914 kcal/mol (1041.1192 without restraints) Performing minimization step: 3769. Total energy = 1044.8741 kcal/mol (1041.0035 without restraints) Performing minimization step: 3770. Total energy = 1044.7568 kcal/mol (1040.8878 without restraints) Performing minimization step: 3771. Total energy = 1044.6397 kcal/mol (1040.7724 without restraints) Performing minimization step: 3772. Total energy = 1044.5228 kcal/mol (1040.6570 without restraints) Performing minimization step: 3773. Total energy = 1044.4059 kcal/mol (1040.5417 without restraints) Performing minimization step: 3774. Total energy = 1044.2891 kcal/mol (1040.4265 without restraints) Performing minimization step: 3775. Total energy = 1044.1727 kcal/mol (1040.3117 without restraints) Performing minimization step: 3776. Total energy = 1044.0567 kcal/mol (1040.1973 without restraints) Performing minimization step: 3777. Total energy = 1043.9405 kcal/mol (1040.0827 without restraints) Performing minimization step: 3778. Total energy = 1043.8245 kcal/mol (1039.9686 without restraints) Performing minimization step: 3779. Total energy = 1043.7089 kcal/mol (1039.8544 without restraints) Performing minimization step: 3780. Total energy = 1043.5932 kcal/mol (1039.7402 without restraints) Performing minimization step: 3781. Total energy = 1043.4772 kcal/mol (1039.6258 without restraints) Performing minimization step: 3782. Total energy = 1043.3615 kcal/mol (1039.5117 without restraints) Performing minimization step: 3783. Total energy = 1043.2459 kcal/mol (1039.3978 without restraints) Performing minimization step: 3784. Total energy = 1043.1303 kcal/mol (1039.2838 without restraints) Performing minimization step: 3785. Total energy = 1043.0149 kcal/mol (1039.1699 without restraints) Performing minimization step: 3786. Total energy = 1042.8998 kcal/mol (1039.0565 without restraints) Performing minimization step: 3787. Total energy = 1042.7848 kcal/mol (1038.9430 without restraints) Performing minimization step: 3788. Total energy = 1042.6699 kcal/mol (1038.8298 without restraints) Performing minimization step: 3789. Total energy = 1042.5556 kcal/mol (1038.7171 without restraints) Performing minimization step: 3790. Total energy = 1042.4410 kcal/mol (1038.6041 without restraints) Performing minimization step: 3791. Total energy = 1042.3265 kcal/mol (1038.4912 without restraints) Performing minimization step: 3792. Total energy = 1042.2127 kcal/mol (1038.3790 without restraints) Performing minimization step: 3793. Total energy = 1042.0985 kcal/mol (1038.2664 without restraints) Performing minimization step: 3794. Total energy = 1041.9849 kcal/mol (1038.1545 without restraints) Performing minimization step: 3795. Total energy = 1041.8711 kcal/mol (1038.0422 without restraints) Performing minimization step: 3796. Total energy = 1041.7573 kcal/mol (1037.9300 without restraints) Performing minimization step: 3797. Total energy = 1041.6434 kcal/mol (1037.8177 without restraints) Performing minimization step: 3798. Total energy = 1041.5295 kcal/mol (1037.7054 without restraints) Performing minimization step: 3799. Total energy = 1041.4164 kcal/mol (1037.5940 without restraints) Performing minimization step: 3800. Total energy = 1041.3031 kcal/mol (1037.4822 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/97a58f6c/tmp/complex_refx/complex_refx.pdb ...Done. Performing minimization step: 3801. Total energy = 1041.1898 kcal/mol (1037.3705 without restraints) Performing minimization step: 3802. Total energy = 1041.0768 kcal/mol (1037.2590 without restraints) Performing minimization step: 3803. Total energy = 1040.9639 kcal/mol (1037.1479 without restraints) Performing minimization step: 3804. Total energy = 1040.8514 kcal/mol (1037.0369 without restraints) Performing minimization step: 3805. Total energy = 1040.7387 kcal/mol (1036.9258 without restraints) Performing minimization step: 3806. Total energy = 1040.6262 kcal/mol (1036.8150 without restraints) Performing minimization step: 3807. Total energy = 1040.5141 kcal/mol (1036.7044 without restraints) Performing minimization step: 3808. Total energy = 1040.4018 kcal/mol (1036.5937 without restraints) Performing minimization step: 3809. Total energy = 1040.2897 kcal/mol (1036.4832 without restraints) Performing minimization step: 3810. Total energy = 1040.1781 kcal/mol (1036.3732 without restraints) Performing minimization step: 3811. Total energy = 1040.0661 kcal/mol (1036.2628 without restraints) Performing minimization step: 3812. Total energy = 1039.9541 kcal/mol (1036.1522 without restraints) Performing minimization step: 3813. Total energy = 1039.8422 kcal/mol (1036.0421 without restraints) Performing minimization step: 3814. Total energy = 1039.7309 kcal/mol (1035.9325 without restraints) Performing minimization step: 3815. Total energy = 1039.6195 kcal/mol (1035.8226 without restraints) Performing minimization step: 3816. Total energy = 1039.5082 kcal/mol (1035.7128 without restraints) Performing minimization step: 3817. Total energy = 1039.3970 kcal/mol (1035.6032 without restraints) Performing minimization step: 3818. Total energy = 1039.2858 kcal/mol (1035.4937 without restraints) Performing minimization step: 3819. Total energy = 1039.1750 kcal/mol (1035.3844 without restraints) Performing minimization step: 3820. Total energy = 1039.0642 kcal/mol (1035.2755 without restraints) Performing minimization step: 3821. Total energy = 1038.9539 kcal/mol (1035.1665 without restraints) Performing minimization step: 3822. Total energy = 1038.8433 kcal/mol (1035.0576 without restraints) Performing minimization step: 3823. Total energy = 1038.7329 kcal/mol (1034.9486 without restraints) Performing minimization step: 3824. Total energy = 1038.6224 kcal/mol (1034.8398 without restraints) Performing minimization step: 3825. Total energy = 1038.5123 kcal/mol (1034.7313 without restraints) Performing minimization step: 3826. Total energy = 1038.4021 kcal/mol (1034.6227 without restraints) Performing minimization step: 3827. Total energy = 1038.2928 kcal/mol (1034.5150 without restraints) Performing minimization step: 3828. Total energy = 1038.1829 kcal/mol (1034.4066 without restraints) Performing minimization step: 3829. Total energy = 1038.0730 kcal/mol (1034.2984 without restraints) Performing minimization step: 3830. Total energy = 1037.9633 kcal/mol (1034.1902 without restraints) Performing minimization step: 3831. Total energy = 1037.8537 kcal/mol (1034.0822 without restraints) Performing minimization step: 3832. Total energy = 1037.7445 kcal/mol (1033.9745 without restraints) Performing minimization step: 3833. Total energy = 1037.6350 kcal/mol (1033.8667 without restraints) Performing minimization step: 3834. Total energy = 1037.5258 kcal/mol (1033.7590 without restraints) Performing minimization step: 3835. Total energy = 1037.4166 kcal/mol (1033.6514 without restraints) Performing minimization step: 3836. Total energy = 1037.3076 kcal/mol (1033.5440 without restraints) Performing minimization step: 3837. Total energy = 1037.1986 kcal/mol (1033.4366 without restraints) Performing minimization step: 3838. Total energy = 1037.0898 kcal/mol (1033.3294 without restraints) Performing minimization step: 3839. Total energy = 1036.9811 kcal/mol (1033.2222 without restraints) Performing minimization step: 3840. Total energy = 1036.8725 kcal/mol (1033.1152 without restraints) Performing minimization step: 3841. Total energy = 1036.7640 kcal/mol (1033.0083 without restraints) Performing minimization step: 3842. Total energy = 1036.6556 kcal/mol (1032.9016 without restraints) Performing minimization step: 3843. Total energy = 1036.5474 kcal/mol (1032.7949 without restraints) Performing minimization step: 3844. Total energy = 1036.4393 kcal/mol (1032.6883 without restraints) Performing minimization step: 3845. Total energy = 1036.3314 kcal/mol (1032.5820 without restraints) Performing minimization step: 3846. Total energy = 1036.2236 kcal/mol (1032.4758 without restraints) Performing minimization step: 3847. Total energy = 1036.1158 kcal/mol (1032.3696 without restraints) Performing minimization step: 3848. Total energy = 1036.0083 kcal/mol (1032.2637 without restraints) Performing minimization step: 3849. Total energy = 1035.9007 kcal/mol (1032.1577 without restraints) Performing minimization step: 3850. Total energy = 1035.7932 kcal/mol (1032.0518 without restraints) Performing minimization step: 3851. Total energy = 1035.6859 kcal/mol (1031.9461 without restraints) Performing minimization step: 3852. Total energy = 1035.5787 kcal/mol (1031.8404 without restraints) Performing minimization step: 3853. Total energy = 1035.4715 kcal/mol (1031.7348 without restraints) Performing minimization step: 3854. Total energy = 1035.3652 kcal/mol (1031.6301 without restraints) Performing minimization step: 3855. Total energy = 1035.2580 kcal/mol (1031.5245 without restraints) Performing minimization step: 3856. Total energy = 1035.1512 kcal/mol (1031.4192 without restraints) Performing minimization step: 3857. Total energy = 1035.0447 kcal/mol (1031.3142 without restraints) Performing minimization step: 3858. Total energy = 1034.9380 kcal/mol (1031.2092 without restraints) Performing minimization step: 3859. Total energy = 1034.8315 kcal/mol (1031.1042 without restraints) Performing minimization step: 3860. Total energy = 1034.7251 kcal/mol (1030.9994 without restraints) Performing minimization step: 3861. Total energy = 1034.6188 kcal/mol (1030.8947 without restraints) Performing minimization step: 3862. Total energy = 1034.5128 kcal/mol (1030.7902 without restraints) Performing minimization step: 3863. Total energy = 1034.4070 kcal/mol (1030.6861 without restraints) Performing minimization step: 3864. Total energy = 1034.3010 kcal/mol (1030.5816 without restraints) Performing minimization step: 3865. Total energy = 1034.1951 kcal/mol (1030.4773 without restraints) Performing minimization step: 3866. Total energy = 1034.0893 kcal/mol (1030.3730 without restraints) Performing minimization step: 3867. Total energy = 1033.9836 kcal/mol (1030.2689 without restraints) Performing minimization step: 3868. Total energy = 1033.8780 kcal/mol (1030.1649 without restraints) Performing minimization step: 3869. Total energy = 1033.7725 kcal/mol (1030.0609 without restraints) Performing minimization step: 3870. Total energy = 1033.6673 kcal/mol (1029.9573 without restraints) Performing minimization step: 3871. Total energy = 1033.5620 kcal/mol (1029.8535 without restraints) Performing minimization step: 3872. Total energy = 1033.4569 kcal/mol (1029.7501 without restraints) Performing minimization step: 3873. Total energy = 1033.3519 kcal/mol (1029.6466 without restraints) Performing minimization step: 3874. Total energy = 1033.2469 kcal/mol (1029.5430 without restraints) Performing minimization step: 3875. Total energy = 1033.1419 kcal/mol (1029.4397 without restraints) Performing minimization step: 3876. Total energy = 1033.0372 kcal/mol (1029.3366 without restraints) Performing minimization step: 3877. Total energy = 1032.9325 kcal/mol (1029.2335 without restraints) Performing minimization step: 3878. Total energy = 1032.8280 kcal/mol (1029.1305 without restraints) Performing minimization step: 3879. Total energy = 1032.7236 kcal/mol (1029.0277 without restraints) Performing minimization step: 3880. Total energy = 1032.6193 kcal/mol (1028.9249 without restraints) Performing minimization step: 3881. Total energy = 1032.5151 kcal/mol (1028.8224 without restraints) Performing minimization step: 3882. Total energy = 1032.4109 kcal/mol (1028.7197 without restraints) Performing minimization step: 3883. Total energy = 1032.3069 kcal/mol (1028.6172 without restraints) Performing minimization step: 3884. Total energy = 1032.2029 kcal/mol (1028.5148 without restraints) Performing minimization step: 3885. Total energy = 1032.0991 kcal/mol (1028.4125 without restraints) Performing minimization step: 3886. Total energy = 1031.9953 kcal/mol (1028.3102 without restraints) Performing minimization step: 3887. Total energy = 1031.8916 kcal/mol (1028.2080 without restraints) Performing minimization step: 3888. Total energy = 1031.7881 kcal/mol (1028.1062 without restraints) Performing minimization step: 3889. Total energy = 1031.6846 kcal/mol (1028.0044 without restraints) Performing minimization step: 3890. Total energy = 1031.5814 kcal/mol (1027.9025 without restraints) Performing minimization step: 3891. Total energy = 1031.4783 kcal/mol (1027.8010 without restraints) Performing minimization step: 3892. Total energy = 1031.3751 kcal/mol (1027.6993 without restraints) Performing minimization step: 3893. Total energy = 1031.2719 kcal/mol (1027.5977 without restraints) Performing minimization step: 3894. Total energy = 1031.1688 kcal/mol (1027.4962 without restraints) Performing minimization step: 3895. Total energy = 1031.0661 kcal/mol (1027.3952 without restraints) Performing minimization step: 3896. Total energy = 1030.9634 kcal/mol (1027.2939 without restraints) Performing minimization step: 3897. Total energy = 1030.8607 kcal/mol (1027.1927 without restraints) Performing minimization step: 3898. Total energy = 1030.7581 kcal/mol (1027.0917 without restraints) Performing minimization step: 3899. Total energy = 1030.6554 kcal/mol (1026.9905 without restraints) Performing minimization step: 3900. Total energy = 1030.5529 kcal/mol (1026.8894 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/97a58f6c/tmp/complex_refx/complex_refx.pdb ...Done. Performing minimization step: 3901. Total energy = 1030.4505 kcal/mol (1026.7887 without restraints) Performing minimization step: 3902. Total energy = 1030.3483 kcal/mol (1026.6881 without restraints) Performing minimization step: 3903. Total energy = 1030.2462 kcal/mol (1026.5875 without restraints) Performing minimization step: 3904. Total energy = 1030.1442 kcal/mol (1026.4870 without restraints) Performing minimization step: 3905. Total energy = 1030.0424 kcal/mol (1026.3868 without restraints) Performing minimization step: 3906. Total energy = 1029.9402 kcal/mol (1026.2861 without restraints) Performing minimization step: 3907. Total energy = 1029.8386 kcal/mol (1026.1861 without restraints) Performing minimization step: 3908. Total energy = 1029.7369 kcal/mol (1026.0859 without restraints) Performing minimization step: 3909. Total energy = 1029.6356 kcal/mol (1025.9861 without restraints) Performing minimization step: 3910. Total energy = 1029.5341 kcal/mol (1025.8862 without restraints) Performing minimization step: 3911. Total energy = 1029.4325 kcal/mol (1025.7861 without restraints) Performing minimization step: 3912. Total energy = 1029.3312 kcal/mol (1025.6863 without restraints) Performing minimization step: 3913. Total energy = 1029.2299 kcal/mol (1025.5866 without restraints) Performing minimization step: 3914. Total energy = 1029.1288 kcal/mol (1025.4870 without restraints) Performing minimization step: 3915. Total energy = 1029.0276 kcal/mol (1025.3874 without restraints) Performing minimization step: 3916. Total energy = 1028.9269 kcal/mol (1025.2883 without restraints) Performing minimization step: 3917. Total energy = 1028.8261 kcal/mol (1025.1890 without restraints) Performing minimization step: 3918. Total energy = 1028.7254 kcal/mol (1025.0897 without restraints) Performing minimization step: 3919. Total energy = 1028.6249 kcal/mol (1024.9908 without restraints) Performing minimization step: 3920. Total energy = 1028.5243 kcal/mol (1024.8918 without restraints) Performing minimization step: 3921. Total energy = 1028.4238 kcal/mol (1024.7928 without restraints) Performing minimization step: 3922. Total energy = 1028.3232 kcal/mol (1024.6937 without restraints) Performing minimization step: 3923. Total energy = 1028.2228 kcal/mol (1024.5949 without restraints) Performing minimization step: 3924. Total energy = 1028.1225 kcal/mol (1024.4961 without restraints) Performing minimization step: 3925. Total energy = 1028.0223 kcal/mol (1024.3974 without restraints) Performing minimization step: 3926. Total energy = 1027.9222 kcal/mol (1024.2988 without restraints) Performing minimization step: 3927. Total energy = 1027.8226 kcal/mol (1024.2007 without restraints) Performing minimization step: 3928. Total energy = 1027.7227 kcal/mol (1024.1023 without restraints) Performing minimization step: 3929. Total energy = 1027.6229 kcal/mol (1024.0041 without restraints) Performing minimization step: 3930. Total energy = 1027.5231 kcal/mol (1023.9058 without restraints) Performing minimization step: 3931. Total energy = 1027.4233 kcal/mol (1023.8075 without restraints) Performing minimization step: 3932. Total energy = 1027.3238 kcal/mol (1023.7095 without restraints) Performing minimization step: 3933. Total energy = 1027.2243 kcal/mol (1023.6116 without restraints) Performing minimization step: 3934. Total energy = 1027.1249 kcal/mol (1023.5137 without restraints) Performing minimization step: 3935. Total energy = 1027.0264 kcal/mol (1023.4167 without restraints) Performing minimization step: 3936. Total energy = 1026.9273 kcal/mol (1023.3191 without restraints) Performing minimization step: 3937. Total energy = 1026.8285 kcal/mol (1023.2218 without restraints) Performing minimization step: 3938. Total energy = 1026.7297 kcal/mol (1023.1245 without restraints) Performing minimization step: 3939. Total energy = 1026.6307 kcal/mol (1023.0271 without restraints) Performing minimization step: 3940. Total energy = 1026.5321 kcal/mol (1022.9299 without restraints) Performing minimization step: 3941. Total energy = 1026.4335 kcal/mol (1022.8329 without restraints) Performing minimization step: 3942. Total energy = 1026.3348 kcal/mol (1022.7357 without restraints) Performing minimization step: 3943. Total energy = 1026.2360 kcal/mol (1022.6384 without restraints) Performing minimization step: 3944. Total energy = 1026.1375 kcal/mol (1022.5414 without restraints) Performing minimization step: 3945. Total energy = 1026.0393 kcal/mol (1022.4447 without restraints) Performing minimization step: 3946. Total energy = 1025.9408 kcal/mol (1022.3477 without restraints) Performing minimization step: 3947. Total energy = 1025.8425 kcal/mol (1022.2509 without restraints) Performing minimization step: 3948. Total energy = 1025.7445 kcal/mol (1022.1545 without restraints) Performing minimization step: 3949. Total energy = 1025.6467 kcal/mol (1022.0581 without restraints) Performing minimization step: 3950. Total energy = 1025.5487 kcal/mol (1021.9616 without restraints) Performing minimization step: 3951. Total energy = 1025.4505 kcal/mol (1021.8649 without restraints) Performing minimization step: 3952. Total energy = 1025.3527 kcal/mol (1021.7686 without restraints) Performing minimization step: 3953. Total energy = 1025.2549 kcal/mol (1021.6724 without restraints) Performing minimization step: 3954. Total energy = 1025.1574 kcal/mol (1021.5764 without restraints) Performing minimization step: 3955. Total energy = 1025.0599 kcal/mol (1021.4804 without restraints) Performing minimization step: 3956. Total energy = 1024.9624 kcal/mol (1021.3844 without restraints) Performing minimization step: 3957. Total energy = 1024.8652 kcal/mol (1021.2887 without restraints) Performing minimization step: 3958. Total energy = 1024.7678 kcal/mol (1021.1928 without restraints) Performing minimization step: 3959. Total energy = 1024.6708 kcal/mol (1021.0973 without restraints) Performing minimization step: 3960. Total energy = 1024.5738 kcal/mol (1021.0018 without restraints) Performing minimization step: 3961. Total energy = 1024.4769 kcal/mol (1020.9064 without restraints) Performing minimization step: 3962. Total energy = 1024.3799 kcal/mol (1020.8108 without restraints) Performing minimization step: 3963. Total energy = 1024.2829 kcal/mol (1020.7154 without restraints) Performing minimization step: 3964. Total energy = 1024.1861 kcal/mol (1020.6200 without restraints) Performing minimization step: 3965. Total energy = 1024.0893 kcal/mol (1020.5248 without restraints) Performing minimization step: 3966. Total energy = 1023.9928 kcal/mol (1020.4298 without restraints) Performing minimization step: 3967. Total energy = 1023.8961 kcal/mol (1020.3346 without restraints) Performing minimization step: 3968. Total energy = 1023.7996 kcal/mol (1020.2395 without restraints) Performing minimization step: 3969. Total energy = 1023.7031 kcal/mol (1020.1445 without restraints) Performing minimization step: 3970. Total energy = 1023.6073 kcal/mol (1020.0504 without restraints) Performing minimization step: 3971. Total energy = 1023.5112 kcal/mol (1019.9556 without restraints) Performing minimization step: 3972. Total energy = 1023.4150 kcal/mol (1019.8609 without restraints) Performing minimization step: 3973. Total energy = 1023.3189 kcal/mol (1019.7663 without restraints) Performing minimization step: 3974. Total energy = 1023.2230 kcal/mol (1019.6718 without restraints) Performing minimization step: 3975. Total energy = 1023.1270 kcal/mol (1019.5773 without restraints) Performing minimization step: 3976. Total energy = 1023.0310 kcal/mol (1019.4829 without restraints) Performing minimization step: 3977. Total energy = 1022.9352 kcal/mol (1019.3885 without restraints) Performing minimization step: 3978. Total energy = 1022.8396 kcal/mol (1019.2944 without restraints) Performing minimization step: 3979. Total energy = 1022.7440 kcal/mol (1019.2002 without restraints) Performing minimization step: 3980. Total energy = 1022.6484 kcal/mol (1019.1061 without restraints) Performing minimization step: 3981. Total energy = 1022.5529 kcal/mol (1019.0121 without restraints) Performing minimization step: 3982. Total energy = 1022.4576 kcal/mol (1018.9183 without restraints) Performing minimization step: 3983. Total energy = 1022.3625 kcal/mol (1018.8247 without restraints) Performing minimization step: 3984. Total energy = 1022.2672 kcal/mol (1018.7309 without restraints) Performing minimization step: 3985. Total energy = 1022.1722 kcal/mol (1018.6374 without restraints) Performing minimization step: 3986. Total energy = 1022.0771 kcal/mol (1018.5437 without restraints) Performing minimization step: 3987. Total energy = 1021.9823 kcal/mol (1018.4503 without restraints) Performing minimization step: 3988. Total energy = 1021.8873 kcal/mol (1018.3568 without restraints) Performing minimization step: 3989. Total energy = 1021.7927 kcal/mol (1018.2637 without restraints) Performing minimization step: 3990. Total energy = 1021.6979 kcal/mol (1018.1703 without restraints) Performing minimization step: 3991. Total energy = 1021.6031 kcal/mol (1018.0770 without restraints) Performing minimization step: 3992. Total energy = 1021.5084 kcal/mol (1017.9838 without restraints) Performing minimization step: 3993. Total energy = 1021.4137 kcal/mol (1017.8906 without restraints) Performing minimization step: 3994. Total energy = 1021.3194 kcal/mol (1017.7977 without restraints) Performing minimization step: 3995. Total energy = 1021.2250 kcal/mol (1017.7048 without restraints) Performing minimization step: 3996. Total energy = 1021.1310 kcal/mol (1017.6123 without restraints) Performing minimization step: 3997. Total energy = 1021.0367 kcal/mol (1017.5195 without restraints) Performing minimization step: 3998. Total energy = 1020.9424 kcal/mol (1017.4267 without restraints) Performing minimization step: 3999. Total energy = 1020.8485 kcal/mol (1017.3342 without restraints) Performing minimization step: 4000. Total energy = 1020.7544 kcal/mol (1017.2416 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/97a58f6c/tmp/complex_refx/complex_refx.pdb ...Done. Performing minimization step: 4001. Total energy = 1020.6604 kcal/mol (1017.1491 without restraints) Performing minimization step: 4002. Total energy = 1020.5666 kcal/mol (1017.0566 without restraints) Performing minimization step: 4003. Total energy = 1020.4727 kcal/mol (1016.9642 without restraints) Performing minimization step: 4004. Total energy = 1020.3789 kcal/mol (1016.8719 without restraints) Performing minimization step: 4005. Total energy = 1020.2852 kcal/mol (1016.7797 without restraints) Performing minimization step: 4006. Total energy = 1020.1916 kcal/mol (1016.6875 without restraints) Performing minimization step: 4007. Total energy = 1020.0976 kcal/mol (1016.5950 without restraints) Performing minimization step: 4008. Total energy = 1020.0042 kcal/mol (1016.5030 without restraints) Performing minimization step: 4009. Total energy = 1019.9108 kcal/mol (1016.4110 without restraints) Performing minimization step: 4010. Total energy = 1019.8176 kcal/mol (1016.3194 without restraints) Performing minimization step: 4011. Total energy = 1019.7244 kcal/mol (1016.2275 without restraints) Performing minimization step: 4012. Total energy = 1019.6312 kcal/mol (1016.1358 without restraints) Performing minimization step: 4013. Total energy = 1019.5381 kcal/mol (1016.0442 without restraints) Performing minimization step: 4014. Total energy = 1019.4451 kcal/mol (1015.9526 without restraints) Performing minimization step: 4015. Total energy = 1019.3521 kcal/mol (1015.8611 without restraints) Performing minimization step: 4016. Total energy = 1019.2593 kcal/mol (1015.7696 without restraints) Performing minimization step: 4017. Total energy = 1019.1665 kcal/mol (1015.6783 without restraints) Performing minimization step: 4018. Total energy = 1019.0737 kcal/mol (1015.5870 without restraints) Performing minimization step: 4019. Total energy = 1018.9808 kcal/mol (1015.4955 without restraints) Performing minimization step: 4020. Total energy = 1018.8885 kcal/mol (1015.4046 without restraints) Performing minimization step: 4021. Total energy = 1018.7960 kcal/mol (1015.3136 without restraints) Performing minimization step: 4022. Total energy = 1018.7035 kcal/mol (1015.2226 without restraints) Performing minimization step: 4023. Total energy = 1018.6112 kcal/mol (1015.1317 without restraints) Performing minimization step: 4024. Total energy = 1018.5182 kcal/mol (1015.0401 without restraints) Performing minimization step: 4025. Total energy = 1018.4262 kcal/mol (1014.9495 without restraints) Performing minimization step: 4026. Total energy = 1018.3342 kcal/mol (1014.8590 without restraints) Performing minimization step: 4027. Total energy = 1018.2423 kcal/mol (1014.7685 without restraints) Performing minimization step: 4028. Total energy = 1018.1502 kcal/mol (1014.6778 without restraints) Performing minimization step: 4029. Total energy = 1018.0587 kcal/mol (1014.5878 without restraints) Performing minimization step: 4030. Total energy = 1017.9668 kcal/mol (1014.4974 without restraints) Performing minimization step: 4031. Total energy = 1017.8754 kcal/mol (1014.4074 without restraints) Performing minimization step: 4032. Total energy = 1017.7834 kcal/mol (1014.3168 without restraints) Performing minimization step: 4033. Total energy = 1017.6918 kcal/mol (1014.2266 without restraints) Performing minimization step: 4034. Total energy = 1017.6002 kcal/mol (1014.1364 without restraints) Performing minimization step: 4035. Total energy = 1017.5089 kcal/mol (1014.0466 without restraints) Performing minimization step: 4036. Total energy = 1017.4175 kcal/mol (1013.9566 without restraints) Performing minimization step: 4037. Total energy = 1017.3261 kcal/mol (1013.8666 without restraints) Performing minimization step: 4038. Total energy = 1017.2348 kcal/mol (1013.7767 without restraints) Performing minimization step: 4039. Total energy = 1017.1437 kcal/mol (1013.6871 without restraints) Performing minimization step: 4040. Total energy = 1017.0525 kcal/mol (1013.5973 without restraints) Performing minimization step: 4041. Total energy = 1016.9616 kcal/mol (1013.5078 without restraints) Performing minimization step: 4042. Total energy = 1016.8705 kcal/mol (1013.4181 without restraints) Performing minimization step: 4043. Total energy = 1016.7795 kcal/mol (1013.3286 without restraints) Performing minimization step: 4044. Total energy = 1016.6888 kcal/mol (1013.2393 without restraints) Performing minimization step: 4045. Total energy = 1016.5981 kcal/mol (1013.1500 without restraints) Performing minimization step: 4046. Total energy = 1016.5073 kcal/mol (1013.0606 without restraints) Performing minimization step: 4047. Total energy = 1016.4167 kcal/mol (1012.9714 without restraints) Performing minimization step: 4048. Total energy = 1016.3263 kcal/mol (1012.8825 without restraints) Performing minimization step: 4049. Total energy = 1016.2358 kcal/mol (1012.7934 without restraints) Performing minimization step: 4050. Total energy = 1016.1453 kcal/mol (1012.7043 without restraints) Performing minimization step: 4051. Total energy = 1016.0549 kcal/mol (1012.6153 without restraints) Performing minimization step: 4052. Total energy = 1015.9646 kcal/mol (1012.5264 without restraints) Performing minimization step: 4053. Total energy = 1015.8743 kcal/mol (1012.4375 without restraints) Performing minimization step: 4054. Total energy = 1015.7841 kcal/mol (1012.3487 without restraints) Performing minimization step: 4055. Total energy = 1015.6941 kcal/mol (1012.2602 without restraints) Performing minimization step: 4056. Total energy = 1015.6041 kcal/mol (1012.1715 without restraints) Performing minimization step: 4057. Total energy = 1015.5141 kcal/mol (1012.0829 without restraints) Performing minimization step: 4058. Total energy = 1015.4242 kcal/mol (1011.9944 without restraints) Performing minimization step: 4059. Total energy = 1015.3344 kcal/mol (1011.9060 without restraints) Performing minimization step: 4060. Total energy = 1015.2446 kcal/mol (1011.8176 without restraints) Performing minimization step: 4061. Total energy = 1015.1546 kcal/mol (1011.7291 without restraints) Performing minimization step: 4062. Total energy = 1015.0652 kcal/mol (1011.6410 without restraints) Performing minimization step: 4063. Total energy = 1014.9755 kcal/mol (1011.5528 without restraints) Performing minimization step: 4064. Total energy = 1014.8860 kcal/mol (1011.4647 without restraints) Performing minimization step: 4065. Total energy = 1014.7966 kcal/mol (1011.3766 without restraints) Performing minimization step: 4066. Total energy = 1014.7071 kcal/mol (1011.2886 without restraints) Performing minimization step: 4067. Total energy = 1014.6178 kcal/mol (1011.2006 without restraints) Performing minimization step: 4068. Total energy = 1014.5293 kcal/mol (1011.1134 without restraints) Performing minimization step: 4069. Total energy = 1014.4399 kcal/mol (1011.0255 without restraints) Performing minimization step: 4070. Total energy = 1014.3507 kcal/mol (1010.9377 without restraints) Performing minimization step: 4071. Total energy = 1014.2613 kcal/mol (1010.8497 without restraints) Performing minimization step: 4072. Total energy = 1014.1723 kcal/mol (1010.7621 without restraints) Performing minimization step: 4073. Total energy = 1014.0835 kcal/mol (1010.6747 without restraints) Performing minimization step: 4074. Total energy = 1013.9946 kcal/mol (1010.5872 without restraints) Performing minimization step: 4075. Total energy = 1013.9058 kcal/mol (1010.4998 without restraints) Performing minimization step: 4076. Total energy = 1013.8172 kcal/mol (1010.4125 without restraints) Performing minimization step: 4077. Total energy = 1013.7286 kcal/mol (1010.3253 without restraints) Performing minimization step: 4078. Total energy = 1013.6400 kcal/mol (1010.2381 without restraints) Performing minimization step: 4079. Total energy = 1013.5515 kcal/mol (1010.1510 without restraints) Performing minimization step: 4080. Total energy = 1013.4629 kcal/mol (1010.0637 without restraints) Performing minimization step: 4081. Total energy = 1013.3744 kcal/mol (1009.9766 without restraints) Performing minimization step: 4082. Total energy = 1013.2860 kcal/mol (1009.8898 without restraints) Performing minimization step: 4083. Total energy = 1013.1979 kcal/mol (1009.8029 without restraints) Performing minimization step: 4084. Total energy = 1013.1097 kcal/mol (1009.7161 without restraints) Performing minimization step: 4085. Total energy = 1013.0214 kcal/mol (1009.6291 without restraints) Performing minimization step: 4086. Total energy = 1012.9332 kcal/mol (1009.5424 without restraints) Performing minimization step: 4087. Total energy = 1012.8454 kcal/mol (1009.4559 without restraints) Performing minimization step: 4088. Total energy = 1012.7572 kcal/mol (1009.3691 without restraints) Performing minimization step: 4089. Total energy = 1012.6692 kcal/mol (1009.2825 without restraints) Performing minimization step: 4090. Total energy = 1012.5817 kcal/mol (1009.1964 without restraints) Performing minimization step: 4091. Total energy = 1012.4941 kcal/mol (1009.1102 without restraints) Performing minimization step: 4092. Total energy = 1012.4065 kcal/mol (1009.0239 without restraints) Performing minimization step: 4093. Total energy = 1012.3190 kcal/mol (1008.9377 without restraints) Performing minimization step: 4094. Total energy = 1012.2318 kcal/mol (1008.8519 without restraints) Performing minimization step: 4095. Total energy = 1012.1440 kcal/mol (1008.7655 without restraints) Performing minimization step: 4096. Total energy = 1012.0566 kcal/mol (1008.6794 without restraints) Performing minimization step: 4097. Total energy = 1011.9693 kcal/mol (1008.5936 without restraints) Performing minimization step: 4098. Total energy = 1011.8820 kcal/mol (1008.5076 without restraints) Performing minimization step: 4099. Total energy = 1011.7945 kcal/mol (1008.4214 without restraints) Performing minimization step: 4100. Total energy = 1011.7072 kcal/mol (1008.3356 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/97a58f6c/tmp/complex_refx/complex_refx.pdb ...Done. Performing minimization step: 4101. Total energy = 1011.6202 kcal/mol (1008.2498 without restraints) Performing minimization step: 4102. Total energy = 1011.5330 kcal/mol (1008.1640 without restraints) Performing minimization step: 4103. Total energy = 1011.4459 kcal/mol (1008.0783 without restraints) Performing minimization step: 4104. Total energy = 1011.3590 kcal/mol (1007.9927 without restraints) Performing minimization step: 4105. Total energy = 1011.2721 kcal/mol (1007.9072 without restraints) Performing minimization step: 4106. Total energy = 1011.1853 kcal/mol (1007.8219 without restraints) Performing minimization step: 4107. Total energy = 1011.0989 kcal/mol (1007.7367 without restraints) Performing minimization step: 4108. Total energy = 1011.0122 kcal/mol (1007.6513 without restraints) Performing minimization step: 4109. Total energy = 1010.9257 kcal/mol (1007.5662 without restraints) Performing minimization step: 4110. Total energy = 1010.8391 kcal/mol (1007.4810 without restraints) Performing minimization step: 4111. Total energy = 1010.7527 kcal/mol (1007.3959 without restraints) Performing minimization step: 4112. Total energy = 1010.6664 kcal/mol (1007.3110 without restraints) Performing minimization step: 4113. Total energy = 1010.5800 kcal/mol (1007.2259 without restraints) Performing minimization step: 4114. Total energy = 1010.4938 kcal/mol (1007.1409 without restraints) Performing minimization step: 4115. Total energy = 1010.4076 kcal/mol (1007.0562 without restraints) Performing minimization step: 4116. Total energy = 1010.3214 kcal/mol (1006.9713 without restraints) Performing minimization step: 4117. Total energy = 1010.2355 kcal/mol (1006.8868 without restraints) Performing minimization step: 4118. Total energy = 1010.1497 kcal/mol (1006.8023 without restraints) Performing minimization step: 4119. Total energy = 1010.0637 kcal/mol (1006.7177 without restraints) Performing minimization step: 4120. Total energy = 1009.9778 kcal/mol (1006.6331 without restraints) Performing minimization step: 4121. Total energy = 1009.8918 kcal/mol (1006.5485 without restraints) Performing minimization step: 4122. Total energy = 1009.8060 kcal/mol (1006.4639 without restraints) Performing minimization step: 4123. Total energy = 1009.7202 kcal/mol (1006.3795 without restraints) Performing minimization step: 4124. Total energy = 1009.6345 kcal/mol (1006.2952 without restraints) Performing minimization step: 4125. Total energy = 1009.5488 kcal/mol (1006.2108 without restraints) Performing minimization step: 4126. Total energy = 1009.4632 kcal/mol (1006.1265 without restraints) Performing minimization step: 4127. Total energy = 1009.3777 kcal/mol (1006.0423 without restraints) Performing minimization step: 4128. Total energy = 1009.2922 kcal/mol (1005.9582 without restraints) Performing minimization step: 4129. Total energy = 1009.2068 kcal/mol (1005.8741 without restraints) Performing minimization step: 4130. Total energy = 1009.1214 kcal/mol (1005.7900 without restraints) Performing minimization step: 4131. Total energy = 1009.0361 kcal/mol (1005.7061 without restraints) Performing minimization step: 4132. Total energy = 1008.9509 kcal/mol (1005.6222 without restraints) Performing minimization step: 4133. Total energy = 1008.8659 kcal/mol (1005.5385 without restraints) Performing minimization step: 4134. Total energy = 1008.7810 kcal/mol (1005.4549 without restraints) Performing minimization step: 4135. Total energy = 1008.6963 kcal/mol (1005.3716 without restraints) Performing minimization step: 4136. Total energy = 1008.6113 kcal/mol (1005.2879 without restraints) Performing minimization step: 4137. Total energy = 1008.5261 kcal/mol (1005.2040 without restraints) Performing minimization step: 4138. Total energy = 1008.4412 kcal/mol (1005.1205 without restraints) Performing minimization step: 4139. Total energy = 1008.3564 kcal/mol (1005.0370 without restraints) Performing minimization step: 4140. Total energy = 1008.2721 kcal/mol (1004.9540 without restraints) Performing minimization step: 4141. Total energy = 1008.1874 kcal/mol (1004.8706 without restraints) Performing minimization step: 4142. Total energy = 1008.1028 kcal/mol (1004.7873 without restraints) Performing minimization step: 4143. Total energy = 1008.0182 kcal/mol (1004.7040 without restraints) Performing minimization step: 4144. Total energy = 1007.9339 kcal/mol (1004.6210 without restraints) Performing minimization step: 4145. Total energy = 1007.8496 kcal/mol (1004.5381 without restraints) Performing minimization step: 4146. Total energy = 1007.7652 kcal/mol (1004.4550 without restraints) Performing minimization step: 4147. Total energy = 1007.6811 kcal/mol (1004.3722 without restraints) Performing minimization step: 4148. Total energy = 1007.5967 kcal/mol (1004.2890 without restraints) Performing minimization step: 4149. Total energy = 1007.5120 kcal/mol (1004.2057 without restraints) Performing minimization step: 4150. Total energy = 1007.4281 kcal/mol (1004.1230 without restraints) Performing minimization step: 4151. Total energy = 1007.3445 kcal/mol (1004.0410 without restraints) Performing minimization step: 4152. Total energy = 1007.2608 kcal/mol (1003.9584 without restraints) Performing minimization step: 4153. Total energy = 1007.1766 kcal/mol (1003.8755 without restraints) Performing minimization step: 4154. Total energy = 1007.0927 kcal/mol (1003.7929 without restraints) Performing minimization step: 4155. Total energy = 1007.0090 kcal/mol (1003.7105 without restraints) Performing minimization step: 4156. Total energy = 1006.9252 kcal/mol (1003.6282 without restraints) Performing minimization step: 4157. Total energy = 1006.8415 kcal/mol (1003.5456 without restraints) Performing minimization step: 4158. Total energy = 1006.7583 kcal/mol (1003.4637 without restraints) Performing minimization step: 4159. Total energy = 1006.6749 kcal/mol (1003.3816 without restraints) Performing minimization step: 4160. Total energy = 1006.5911 kcal/mol (1003.2991 without restraints) Performing minimization step: 4161. Total energy = 1006.5075 kcal/mol (1003.2168 without restraints) Performing minimization step: 4162. Total energy = 1006.4240 kcal/mol (1003.1346 without restraints) Performing minimization step: 4163. Total energy = 1006.3408 kcal/mol (1003.0527 without restraints) Performing minimization step: 4164. Total energy = 1006.2574 kcal/mol (1002.9706 without restraints) Performing minimization step: 4165. Total energy = 1006.1743 kcal/mol (1002.8888 without restraints) Performing minimization step: 4166. Total energy = 1006.0911 kcal/mol (1002.8068 without restraints) Performing minimization step: 4167. Total energy = 1006.0079 kcal/mol (1002.7249 without restraints) Performing minimization step: 4168. Total energy = 1005.9249 kcal/mol (1002.6433 without restraints) Performing minimization step: 4169. Total energy = 1005.8419 kcal/mol (1002.5615 without restraints) Performing minimization step: 4170. Total energy = 1005.7589 kcal/mol (1002.4798 without restraints) Performing minimization step: 4171. Total energy = 1005.6759 kcal/mol (1002.3981 without restraints) Performing minimization step: 4172. Total energy = 1005.5933 kcal/mol (1002.3169 without restraints) Performing minimization step: 4173. Total energy = 1005.5108 kcal/mol (1002.2356 without restraints) Performing minimization step: 4174. Total energy = 1005.4280 kcal/mol (1002.1541 without restraints) Performing minimization step: 4175. Total energy = 1005.3451 kcal/mol (1002.0724 without restraints) Performing minimization step: 4176. Total energy = 1005.2625 kcal/mol (1001.9913 without restraints) Performing minimization step: 4177. Total energy = 1005.1802 kcal/mol (1001.9101 without restraints) Performing minimization step: 4178. Total energy = 1005.0974 kcal/mol (1001.8286 without restraints) Performing minimization step: 4179. Total energy = 1005.0149 kcal/mol (1001.7474 without restraints) Performing minimization step: 4180. Total energy = 1004.9325 kcal/mol (1001.6662 without restraints) Performing minimization step: 4181. Total energy = 1004.8501 kcal/mol (1001.5851 without restraints) Performing minimization step: 4182. Total energy = 1004.7678 kcal/mol (1001.5041 without restraints) Performing minimization step: 4183. Total energy = 1004.6855 kcal/mol (1001.4230 without restraints) Performing minimization step: 4184. Total energy = 1004.6032 kcal/mol (1001.3420 without restraints) Performing minimization step: 4185. Total energy = 1004.5210 kcal/mol (1001.2611 without restraints) Performing minimization step: 4186. Total energy = 1004.4385 kcal/mol (1001.1799 without restraints) Performing minimization step: 4187. Total energy = 1004.3568 kcal/mol (1001.0994 without restraints) Performing minimization step: 4188. Total energy = 1004.2748 kcal/mol (1001.0187 without restraints) Performing minimization step: 4189. Total energy = 1004.1929 kcal/mol (1000.9380 without restraints) Performing minimization step: 4190. Total energy = 1004.1110 kcal/mol (1000.8574 without restraints) Performing minimization step: 4191. Total energy = 1004.0291 kcal/mol (1000.7768 without restraints) Performing minimization step: 4192. Total energy = 1003.9473 kcal/mol (1000.6963 without restraints) Performing minimization step: 4193. Total energy = 1003.8662 kcal/mol (1000.6164 without restraints) Performing minimization step: 4194. Total energy = 1003.7849 kcal/mol (1000.5364 without restraints) Performing minimization step: 4195. Total energy = 1003.7033 kcal/mol (1000.4560 without restraints) Performing minimization step: 4196. Total energy = 1003.6221 kcal/mol (1000.3762 without restraints) Performing minimization step: 4197. Total energy = 1003.5407 kcal/mol (1000.2959 without restraints) Performing minimization step: 4198. Total energy = 1003.4592 kcal/mol (1000.2157 without restraints) Performing minimization step: 4199. Total energy = 1003.3778 kcal/mol (1000.1356 without restraints) Performing minimization step: 4200. Total energy = 1003.2965 kcal/mol (1000.0555 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/97a58f6c/tmp/complex_refx/complex_refx.pdb ...Done. Performing minimization step: 4201. Total energy = 1003.2154 kcal/mol (999.9757 without restraints) Performing minimization step: 4202. Total energy = 1003.1342 kcal/mol (999.8957 without restraints) Performing minimization step: 4203. Total energy = 1003.0528 kcal/mol (999.8156 without restraints) Performing minimization step: 4204. Total energy = 1002.9716 kcal/mol (999.7356 without restraints) Performing minimization step: 4205. Total energy = 1002.8907 kcal/mol (999.6560 without restraints) Performing minimization step: 4206. Total energy = 1002.8097 kcal/mol (999.5762 without restraints) Performing minimization step: 4207. Total energy = 1002.7290 kcal/mol (999.4968 without restraints) Performing minimization step: 4208. Total energy = 1002.6479 kcal/mol (999.4169 without restraints) Performing minimization step: 4209. Total energy = 1002.5670 kcal/mol (999.3373 without restraints) Performing minimization step: 4210. Total energy = 1002.4863 kcal/mol (999.2579 without restraints) Performing minimization step: 4211. Total energy = 1002.4057 kcal/mol (999.1784 without restraints) Performing minimization step: 4212. Total energy = 1002.3251 kcal/mol (999.0992 without restraints) Performing minimization step: 4213. Total energy = 1002.2446 kcal/mol (999.0198 without restraints) Performing minimization step: 4214. Total energy = 1002.1636 kcal/mol (998.9400 without restraints) Performing minimization step: 4215. Total energy = 1002.0831 kcal/mol (998.8607 without restraints) Performing minimization step: 4216. Total energy = 1002.0023 kcal/mol (998.7812 without restraints) Performing minimization step: 4217. Total energy = 1001.9221 kcal/mol (998.7023 without restraints) Performing minimization step: 4218. Total energy = 1001.8419 kcal/mol (998.6233 without restraints) Performing minimization step: 4219. Total energy = 1001.7619 kcal/mol (998.5445 without restraints) Performing minimization step: 4220. Total energy = 1001.6818 kcal/mol (998.4657 without restraints) Performing minimization step: 4221. Total energy = 1001.6016 kcal/mol (998.3867 without restraints) Performing minimization step: 4222. Total energy = 1001.5213 kcal/mol (998.3076 without restraints) Performing minimization step: 4223. Total energy = 1001.4412 kcal/mol (998.2287 without restraints) Performing minimization step: 4224. Total energy = 1001.3620 kcal/mol (998.1508 without restraints) Performing minimization step: 4225. Total energy = 1001.2820 kcal/mol (998.0720 without restraints) Performing minimization step: 4226. Total energy = 1001.2021 kcal/mol (997.9933 without restraints) Performing minimization step: 4227. Total energy = 1001.1224 kcal/mol (997.9149 without restraints) Performing minimization step: 4228. Total energy = 1001.0430 kcal/mol (997.8366 without restraints) Performing minimization step: 4229. Total energy = 1000.9630 kcal/mol (997.7578 without restraints) Performing minimization step: 4230. Total energy = 1000.8833 kcal/mol (997.6793 without restraints) Performing minimization step: 4231. Total energy = 1000.8035 kcal/mol (997.6008 without restraints) Performing minimization step: 4232. Total energy = 1000.7239 kcal/mol (997.5225 without restraints) Performing minimization step: 4233. Total energy = 1000.6442 kcal/mol (997.4439 without restraints) Performing minimization step: 4234. Total energy = 1000.5646 kcal/mol (997.3654 without restraints) Performing minimization step: 4235. Total energy = 1000.4850 kcal/mol (997.2872 without restraints) Performing minimization step: 4236. Total energy = 1000.4057 kcal/mol (997.2090 without restraints) Performing minimization step: 4237. Total energy = 1000.3263 kcal/mol (997.1309 without restraints) Performing minimization step: 4238. Total energy = 1000.2468 kcal/mol (997.0527 without restraints) Performing minimization step: 4239. Total energy = 1000.1676 kcal/mol (996.9746 without restraints) Performing minimization step: 4240. Total energy = 1000.0884 kcal/mol (996.8966 without restraints) Performing minimization step: 4241. Total energy = 1000.0092 kcal/mol (996.8186 without restraints) Performing minimization step: 4242. Total energy = 999.9301 kcal/mol (996.7407 without restraints) Performing minimization step: 4243. Total energy = 999.8510 kcal/mol (996.6629 without restraints) Performing minimization step: 4244. Total energy = 999.7722 kcal/mol (996.5853 without restraints) Performing minimization step: 4245. Total energy = 999.6933 kcal/mol (996.5075 without restraints) Performing minimization step: 4246. Total energy = 999.6143 kcal/mol (996.4296 without restraints) Performing minimization step: 4247. Total energy = 999.5353 kcal/mol (996.3520 without restraints) Performing minimization step: 4248. Total energy = 999.4563 kcal/mol (996.2742 without restraints) Performing minimization step: 4249. Total energy = 999.3776 kcal/mol (996.1967 without restraints) Performing minimization step: 4250. Total energy = 999.2993 kcal/mol (996.1196 without restraints) Performing minimization step: 4251. Total energy = 999.2209 kcal/mol (996.0425 without restraints) Performing minimization step: 4252. Total energy = 999.1424 kcal/mol (995.9651 without restraints) Performing minimization step: 4253. Total energy = 999.0641 kcal/mol (995.8880 without restraints) Performing minimization step: 4254. Total energy = 998.9857 kcal/mol (995.8107 without restraints) Performing minimization step: 4255. Total energy = 998.9074 kcal/mol (995.7336 without restraints) Performing minimization step: 4256. Total energy = 998.8292 kcal/mol (995.6567 without restraints) Performing minimization step: 4257. Total energy = 998.7513 kcal/mol (995.5799 without restraints) Performing minimization step: 4258. Total energy = 998.6731 kcal/mol (995.5029 without restraints) Performing minimization step: 4259. Total energy = 998.5950 kcal/mol (995.4260 without restraints) Performing minimization step: 4260. Total energy = 998.5168 kcal/mol (995.3488 without restraints) Performing minimization step: 4261. Total energy = 998.4385 kcal/mol (995.2719 without restraints) Performing minimization step: 4262. Total energy = 998.3607 kcal/mol (995.1952 without restraints) Performing minimization step: 4263. Total energy = 998.2826 kcal/mol (995.1183 without restraints) Performing minimization step: 4264. Total energy = 998.2046 kcal/mol (995.0415 without restraints) Performing minimization step: 4265. Total energy = 998.1269 kcal/mol (994.9650 without restraints) Performing minimization step: 4266. Total energy = 998.0493 kcal/mol (994.8886 without restraints) Performing minimization step: 4267. Total energy = 997.9719 kcal/mol (994.8124 without restraints) Performing minimization step: 4268. Total energy = 997.8943 kcal/mol (994.7360 without restraints) Performing minimization step: 4269. Total energy = 997.8166 kcal/mol (994.6594 without restraints) Performing minimization step: 4270. Total energy = 997.7392 kcal/mol (994.5832 without restraints) Performing minimization step: 4271. Total energy = 997.6618 kcal/mol (994.5070 without restraints) Performing minimization step: 4272. Total energy = 997.5845 kcal/mol (994.4309 without restraints) Performing minimization step: 4273. Total energy = 997.5070 kcal/mol (994.3545 without restraints) Performing minimization step: 4274. Total energy = 997.4295 kcal/mol (994.2782 without restraints) Performing minimization step: 4275. Total energy = 997.3523 kcal/mol (994.2022 without restraints) Performing minimization step: 4276. Total energy = 997.2751 kcal/mol (994.1262 without restraints) Performing minimization step: 4277. Total energy = 997.1978 kcal/mol (994.0500 without restraints) Performing minimization step: 4278. Total energy = 997.1205 kcal/mol (993.9739 without restraints) Performing minimization step: 4279. Total energy = 997.0434 kcal/mol (993.8981 without restraints) Performing minimization step: 4280. Total energy = 996.9666 kcal/mol (993.8223 without restraints) Performing minimization step: 4281. Total energy = 996.8895 kcal/mol (993.7463 without restraints) Performing minimization step: 4282. Total energy = 996.8124 kcal/mol (993.6704 without restraints) Performing minimization step: 4283. Total energy = 996.7360 kcal/mol (993.5952 without restraints) Performing minimization step: 4284. Total energy = 996.6591 kcal/mol (993.5196 without restraints) Performing minimization step: 4285. Total energy = 996.5823 kcal/mol (993.4438 without restraints) Performing minimization step: 4286. Total energy = 996.5054 kcal/mol (993.3681 without restraints) Performing minimization step: 4287. Total energy = 996.4286 kcal/mol (993.2925 without restraints) Performing minimization step: 4288. Total energy = 996.3515 kcal/mol (993.2165 without restraints) Performing minimization step: 4289. Total energy = 996.2746 kcal/mol (993.1407 without restraints) Performing minimization step: 4290. Total energy = 996.1979 kcal/mol (993.0652 without restraints) Performing minimization step: 4291. Total energy = 996.1212 kcal/mol (992.9897 without restraints) Performing minimization step: 4292. Total energy = 996.0448 kcal/mol (992.9146 without restraints) Performing minimization step: 4293. Total energy = 995.9685 kcal/mol (992.8393 without restraints) Performing minimization step: 4294. Total energy = 995.8921 kcal/mol (992.7640 without restraints) Performing minimization step: 4295. Total energy = 995.8156 kcal/mol (992.6886 without restraints) Performing minimization step: 4296. Total energy = 995.7396 kcal/mol (992.6138 without restraints) Performing minimization step: 4297. Total energy = 995.6633 kcal/mol (992.5387 without restraints) Performing minimization step: 4298. Total energy = 995.5871 kcal/mol (992.4635 without restraints) Performing minimization step: 4299. Total energy = 995.5108 kcal/mol (992.3885 without restraints) Performing minimization step: 4300. Total energy = 995.4346 kcal/mol (992.3134 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/97a58f6c/tmp/complex_refx/complex_refx.pdb ...Done. Performing minimization step: 4301. Total energy = 995.3585 kcal/mol (992.2384 without restraints) Performing minimization step: 4302. Total energy = 995.2822 kcal/mol (992.1632 without restraints) Performing minimization step: 4303. Total energy = 995.2061 kcal/mol (992.0883 without restraints) Performing minimization step: 4304. Total energy = 995.1306 kcal/mol (992.0141 without restraints) Performing minimization step: 4305. Total energy = 995.0548 kcal/mol (991.9393 without restraints) Performing minimization step: 4306. Total energy = 994.9789 kcal/mol (991.8645 without restraints) Performing minimization step: 4307. Total energy = 994.9030 kcal/mol (991.7898 without restraints) Performing minimization step: 4308. Total energy = 994.8272 kcal/mol (991.7151 without restraints) Performing minimization step: 4309. Total energy = 994.7514 kcal/mol (991.6404 without restraints) Performing minimization step: 4310. Total energy = 994.6761 kcal/mol (991.5663 without restraints) Performing minimization step: 4311. Total energy = 994.6005 kcal/mol (991.4917 without restraints) Performing minimization step: 4312. Total energy = 994.5249 kcal/mol (991.4174 without restraints) Performing minimization step: 4313. Total energy = 994.4494 kcal/mol (991.3429 without restraints) Performing minimization step: 4314. Total energy = 994.3740 kcal/mol (991.2687 without restraints) Performing minimization step: 4315. Total energy = 994.2987 kcal/mol (991.1945 without restraints) Performing minimization step: 4316. Total energy = 994.2233 kcal/mol (991.1202 without restraints) Performing minimization step: 4317. Total energy = 994.1478 kcal/mol (991.0457 without restraints) Performing minimization step: 4318. Total energy = 994.0724 kcal/mol (990.9716 without restraints) Performing minimization step: 4319. Total energy = 993.9971 kcal/mol (990.8974 without restraints) Performing minimization step: 4320. Total energy = 993.9219 kcal/mol (990.8233 without restraints) Performing minimization step: 4321. Total energy = 993.8465 kcal/mol (990.7490 without restraints) Performing minimization step: 4322. Total energy = 993.7714 kcal/mol (990.6751 without restraints) Performing minimization step: 4323. Total energy = 993.6966 kcal/mol (990.6013 without restraints) Performing minimization step: 4324. Total energy = 993.6220 kcal/mol (990.5278 without restraints) Performing minimization step: 4325. Total energy = 993.5470 kcal/mol (990.4540 without restraints) Performing minimization step: 4326. Total energy = 993.4720 kcal/mol (990.3802 without restraints) Performing minimization step: 4327. Total energy = 993.3974 kcal/mol (990.3067 without restraints) Performing minimization step: 4328. Total energy = 993.3227 kcal/mol (990.2332 without restraints) Performing minimization step: 4329. Total energy = 993.2480 kcal/mol (990.1594 without restraints) Performing minimization step: 4330. Total energy = 993.1732 kcal/mol (990.0858 without restraints) Performing minimization step: 4331. Total energy = 993.0985 kcal/mol (990.0121 without restraints) Performing minimization step: 4332. Total energy = 993.0239 kcal/mol (989.9388 without restraints) Performing minimization step: 4333. Total energy = 992.9491 kcal/mol (989.8650 without restraints) Performing minimization step: 4334. Total energy = 992.8747 kcal/mol (989.7917 without restraints) Performing minimization step: 4335. Total energy = 992.8004 kcal/mol (989.7185 without restraints) Performing minimization step: 4336. Total energy = 992.7261 kcal/mol (989.6453 without restraints) Performing minimization step: 4337. Total energy = 992.6517 kcal/mol (989.5720 without restraints) Performing minimization step: 4338. Total energy = 992.5773 kcal/mol (989.4987 without restraints) Performing minimization step: 4339. Total energy = 992.5030 kcal/mol (989.4255 without restraints) Performing minimization step: 4340. Total energy = 992.4287 kcal/mol (989.3523 without restraints) Performing minimization step: 4341. Total energy = 992.3544 kcal/mol (989.2791 without restraints) Performing minimization step: 4342. Total energy = 992.2800 kcal/mol (989.2056 without restraints) Performing minimization step: 4343. Total energy = 992.2055 kcal/mol (989.1324 without restraints) Performing minimization step: 4344. Total energy = 992.1314 kcal/mol (989.0593 without restraints) Performing minimization step: 4345. Total energy = 992.0574 kcal/mol (988.9865 without restraints) Performing minimization step: 4346. Total energy = 991.9834 kcal/mol (988.9136 without restraints) Performing minimization step: 4347. Total energy = 991.9094 kcal/mol (988.8407 without restraints) Performing minimization step: 4348. Total energy = 991.8357 kcal/mol (988.7680 without restraints) Performing minimization step: 4349. Total energy = 991.7618 kcal/mol (988.6952 without restraints) Performing minimization step: 4350. Total energy = 991.6880 kcal/mol (988.6225 without restraints) Performing minimization step: 4351. Total energy = 991.6142 kcal/mol (988.5498 without restraints) Performing minimization step: 4352. Total energy = 991.5404 kcal/mol (988.4771 without restraints) Performing minimization step: 4353. Total energy = 991.4669 kcal/mol (988.4047 without restraints) Performing minimization step: 4354. Total energy = 991.3935 kcal/mol (988.3323 without restraints) Performing minimization step: 4355. Total energy = 991.3199 kcal/mol (988.2598 without restraints) Performing minimization step: 4356. Total energy = 991.2464 kcal/mol (988.1874 without restraints) Performing minimization step: 4357. Total energy = 991.1729 kcal/mol (988.1150 without restraints) Performing minimization step: 4358. Total energy = 991.0994 kcal/mol (988.0425 without restraints) Performing minimization step: 4359. Total energy = 991.0261 kcal/mol (987.9704 without restraints) Performing minimization step: 4360. Total energy = 990.9529 kcal/mol (987.8983 without restraints) Performing minimization step: 4361. Total energy = 990.8796 kcal/mol (987.8260 without restraints) Performing minimization step: 4362. Total energy = 990.8066 kcal/mol (987.7541 without restraints) Performing minimization step: 4363. Total energy = 990.7334 kcal/mol (987.6819 without restraints) Performing minimization step: 4364. Total energy = 990.6603 kcal/mol (987.6100 without restraints) Performing minimization step: 4365. Total energy = 990.5871 kcal/mol (987.5379 without restraints) Performing minimization step: 4366. Total energy = 990.5143 kcal/mol (987.4661 without restraints) Performing minimization step: 4367. Total energy = 990.4413 kcal/mol (987.3942 without restraints) Performing minimization step: 4368. Total energy = 990.3682 kcal/mol (987.3221 without restraints) Performing minimization step: 4369. Total energy = 990.2953 kcal/mol (987.2504 without restraints) Performing minimization step: 4370. Total energy = 990.2225 kcal/mol (987.1785 without restraints) Performing minimization step: 4371. Total energy = 990.1495 kcal/mol (987.1067 without restraints) Performing minimization step: 4372. Total energy = 990.0767 kcal/mol (987.0348 without restraints) Performing minimization step: 4373. Total energy = 990.0038 kcal/mol (986.9631 without restraints) Performing minimization step: 4374. Total energy = 989.9310 kcal/mol (986.8913 without restraints) Performing minimization step: 4375. Total energy = 989.8583 kcal/mol (986.8197 without restraints) Performing minimization step: 4376. Total energy = 989.7859 kcal/mol (986.7483 without restraints) Performing minimization step: 4377. Total energy = 989.7133 kcal/mol (986.6767 without restraints) Performing minimization step: 4378. Total energy = 989.6406 kcal/mol (986.6052 without restraints) Performing minimization step: 4379. Total energy = 989.5681 kcal/mol (986.5337 without restraints) Performing minimization step: 4380. Total energy = 989.4955 kcal/mol (986.4621 without restraints) Performing minimization step: 4381. Total energy = 989.4232 kcal/mol (986.3909 without restraints) Performing minimization step: 4382. Total energy = 989.3513 kcal/mol (986.3200 without restraints) Performing minimization step: 4383. Total energy = 989.2789 kcal/mol (986.2487 without restraints) Performing minimization step: 4384. Total energy = 989.2066 kcal/mol (986.1775 without restraints) Performing minimization step: 4385. Total energy = 989.1349 kcal/mol (986.1068 without restraints) Performing minimization step: 4386. Total energy = 989.0626 kcal/mol (986.0356 without restraints) Performing minimization step: 4387. Total energy = 988.9904 kcal/mol (985.9644 without restraints) Performing minimization step: 4388. Total energy = 988.9184 kcal/mol (985.8935 without restraints) Performing minimization step: 4389. Total energy = 988.8464 kcal/mol (985.8226 without restraints) Performing minimization step: 4390. Total energy = 988.7744 kcal/mol (985.7515 without restraints) Performing minimization step: 4391. Total energy = 988.7021 kcal/mol (985.6803 without restraints) Performing minimization step: 4392. Total energy = 988.6301 kcal/mol (985.6094 without restraints) Performing minimization step: 4393. Total energy = 988.5582 kcal/mol (985.5384 without restraints) Performing minimization step: 4394. Total energy = 988.4864 kcal/mol (985.4678 without restraints) Performing minimization step: 4395. Total energy = 988.4145 kcal/mol (985.3968 without restraints) Performing minimization step: 4396. Total energy = 988.3426 kcal/mol (985.3260 without restraints) Performing minimization step: 4397. Total energy = 988.2707 kcal/mol (985.2551 without restraints) Performing minimization step: 4398. Total energy = 988.1990 kcal/mol (985.1846 without restraints) Performing minimization step: 4399. Total energy = 988.1276 kcal/mol (985.1141 without restraints) Performing minimization step: 4400. Total energy = 988.0560 kcal/mol (985.0435 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/97a58f6c/tmp/complex_refx/complex_refx.pdb ...Done. Performing minimization step: 4401. Total energy = 987.9844 kcal/mol (984.9730 without restraints) Performing minimization step: 4402. Total energy = 987.9130 kcal/mol (984.9026 without restraints) Performing minimization step: 4403. Total energy = 987.8418 kcal/mol (984.8324 without restraints) Performing minimization step: 4404. Total energy = 987.7703 kcal/mol (984.7620 without restraints) Performing minimization step: 4405. Total energy = 987.6989 kcal/mol (984.6916 without restraints) Performing minimization step: 4406. Total energy = 987.6275 kcal/mol (984.6212 without restraints) Performing minimization step: 4407. Total energy = 987.5561 kcal/mol (984.5509 without restraints) Performing minimization step: 4408. Total energy = 987.4851 kcal/mol (984.4808 without restraints) Performing minimization step: 4409. Total energy = 987.4139 kcal/mol (984.4107 without restraints) Performing minimization step: 4410. Total energy = 987.3427 kcal/mol (984.3405 without restraints) Performing minimization step: 4411. Total energy = 987.2717 kcal/mol (984.2705 without restraints) Performing minimization step: 4412. Total energy = 987.2006 kcal/mol (984.2005 without restraints) Performing minimization step: 4413. Total energy = 987.1295 kcal/mol (984.1304 without restraints) Performing minimization step: 4414. Total energy = 987.0585 kcal/mol (984.0604 without restraints) Performing minimization step: 4415. Total energy = 986.9875 kcal/mol (983.9905 without restraints) Performing minimization step: 4416. Total energy = 986.9165 kcal/mol (983.9205 without restraints) Performing minimization step: 4417. Total energy = 986.8460 kcal/mol (983.8510 without restraints) Performing minimization step: 4418. Total energy = 986.7753 kcal/mol (983.7814 without restraints) Performing minimization step: 4419. Total energy = 986.7046 kcal/mol (983.7116 without restraints) Performing minimization step: 4420. Total energy = 986.6339 kcal/mol (983.6418 without restraints) Performing minimization step: 4421. Total energy = 986.5631 kcal/mol (983.5721 without restraints) Performing minimization step: 4422. Total energy = 986.4924 kcal/mol (983.5024 without restraints) Performing minimization step: 4423. Total energy = 986.4221 kcal/mol (983.4332 without restraints) Performing minimization step: 4424. Total energy = 986.3516 kcal/mol (983.3636 without restraints) Performing minimization step: 4425. Total energy = 986.2810 kcal/mol (983.2940 without restraints) Performing minimization step: 4426. Total energy = 986.2105 kcal/mol (983.2246 without restraints) Performing minimization step: 4427. Total energy = 986.1402 kcal/mol (983.1552 without restraints) Performing minimization step: 4428. Total energy = 986.0696 kcal/mol (983.0857 without restraints) Performing minimization step: 4429. Total energy = 985.9992 kcal/mol (983.0163 without restraints) Performing minimization step: 4430. Total energy = 985.9290 kcal/mol (982.9471 without restraints) Performing minimization step: 4431. Total energy = 985.8589 kcal/mol (982.8780 without restraints) Performing minimization step: 4432. Total energy = 985.7887 kcal/mol (982.8087 without restraints) Performing minimization step: 4433. Total energy = 985.7184 kcal/mol (982.7394 without restraints) Performing minimization step: 4434. Total energy = 985.6484 kcal/mol (982.6704 without restraints) Performing minimization step: 4435. Total energy = 985.5782 kcal/mol (982.6012 without restraints) Performing minimization step: 4436. Total energy = 985.5081 kcal/mol (982.5321 without restraints) Performing minimization step: 4437. Total energy = 985.4380 kcal/mol (982.4630 without restraints) Performing minimization step: 4438. Total energy = 985.3682 kcal/mol (982.3942 without restraints) Performing minimization step: 4439. Total energy = 985.2985 kcal/mol (982.3255 without restraints) Performing minimization step: 4440. Total energy = 985.2289 kcal/mol (982.2569 without restraints) Performing minimization step: 4441. Total energy = 985.1590 kcal/mol (982.1880 without restraints) Performing minimization step: 4442. Total energy = 985.0892 kcal/mol (982.1192 without restraints) Performing minimization step: 4443. Total energy = 985.0194 kcal/mol (982.0504 without restraints) Performing minimization step: 4444. Total energy = 984.9496 kcal/mol (981.9816 without restraints) Performing minimization step: 4445. Total energy = 984.8799 kcal/mol (981.9129 without restraints) Performing minimization step: 4446. Total energy = 984.8105 kcal/mol (981.8444 without restraints) Performing minimization step: 4447. Total energy = 984.7408 kcal/mol (981.7758 without restraints) Performing minimization step: 4448. Total energy = 984.6712 kcal/mol (981.7071 without restraints) Performing minimization step: 4449. Total energy = 984.6016 kcal/mol (981.6385 without restraints) Performing minimization step: 4450. Total energy = 984.5321 kcal/mol (981.5699 without restraints) Performing minimization step: 4451. Total energy = 984.4630 kcal/mol (981.5019 without restraints) Performing minimization step: 4452. Total energy = 984.3937 kcal/mol (981.4336 without restraints) Performing minimization step: 4453. Total energy = 984.3248 kcal/mol (981.3655 without restraints) Performing minimization step: 4454. Total energy = 984.2555 kcal/mol (981.2973 without restraints) Performing minimization step: 4455. Total energy = 984.1861 kcal/mol (981.2288 without restraints) Performing minimization step: 4456. Total energy = 984.1168 kcal/mol (981.1605 without restraints) Performing minimization step: 4457. Total energy = 984.0477 kcal/mol (981.0924 without restraints) Performing minimization step: 4458. Total energy = 983.9785 kcal/mol (981.0241 without restraints) Performing minimization step: 4459. Total energy = 983.9093 kcal/mol (980.9560 without restraints) Performing minimization step: 4460. Total energy = 983.8402 kcal/mol (980.8878 without restraints) Performing minimization step: 4461. Total energy = 983.7713 kcal/mol (980.8199 without restraints) Performing minimization step: 4462. Total energy = 983.7023 kcal/mol (980.7519 without restraints) Performing minimization step: 4463. Total energy = 983.6334 kcal/mol (980.6838 without restraints) Performing minimization step: 4464. Total energy = 983.5644 kcal/mol (980.6158 without restraints) Performing minimization step: 4465. Total energy = 983.4954 kcal/mol (980.5478 without restraints) Performing minimization step: 4466. Total energy = 983.4265 kcal/mol (980.4799 without restraints) Performing minimization step: 4467. Total energy = 983.3578 kcal/mol (980.4122 without restraints) Performing minimization step: 4468. Total energy = 983.2890 kcal/mol (980.3443 without restraints) Performing minimization step: 4469. Total energy = 983.2202 kcal/mol (980.2764 without restraints) Performing minimization step: 4470. Total energy = 983.1510 kcal/mol (980.2082 without restraints) Performing minimization step: 4471. Total energy = 983.0823 kcal/mol (980.1405 without restraints) Performing minimization step: 4472. Total energy = 983.0136 kcal/mol (980.0728 without restraints) Performing minimization step: 4473. Total energy = 982.9450 kcal/mol (980.0051 without restraints) Performing minimization step: 4474. Total energy = 982.8763 kcal/mol (979.9373 without restraints) Performing minimization step: 4475. Total energy = 982.8077 kcal/mol (979.8697 without restraints) Performing minimization step: 4476. Total energy = 982.7391 kcal/mol (979.8021 without restraints) Performing minimization step: 4477. Total energy = 982.6705 kcal/mol (979.7344 without restraints) Performing minimization step: 4478. Total energy = 982.6019 kcal/mol (979.6668 without restraints) Performing minimization step: 4479. Total energy = 982.5337 kcal/mol (979.5995 without restraints) Performing minimization step: 4480. Total energy = 982.4648 kcal/mol (979.5314 without restraints) Performing minimization step: 4481. Total energy = 982.3964 kcal/mol (979.4641 without restraints) Performing minimization step: 4482. Total energy = 982.3280 kcal/mol (979.3966 without restraints) Performing minimization step: 4483. Total energy = 982.2597 kcal/mol (979.3293 without restraints) Performing minimization step: 4484. Total energy = 982.1916 kcal/mol (979.2621 without restraints) Performing minimization step: 4485. Total energy = 982.1237 kcal/mol (979.1952 without restraints) Performing minimization step: 4486. Total energy = 982.0558 kcal/mol (979.1282 without restraints) Performing minimization step: 4487. Total energy = 981.9877 kcal/mol (979.0611 without restraints) Performing minimization step: 4488. Total energy = 981.9202 kcal/mol (978.9945 without restraints) Performing minimization step: 4489. Total energy = 981.8523 kcal/mol (978.9276 without restraints) Performing minimization step: 4490. Total energy = 981.7846 kcal/mol (978.8610 without restraints) Performing minimization step: 4491. Total energy = 981.7172 kcal/mol (978.7943 without restraints) Performing minimization step: 4492. Total energy = 981.6494 kcal/mol (978.7276 without restraints) Performing minimization step: 4493. Total energy = 981.5818 kcal/mol (978.6607 without restraints) Performing minimization step: 4494. Total energy = 981.5141 kcal/mol (978.5940 without restraints) Performing minimization step: 4495. Total energy = 981.4465 kcal/mol (978.5274 without restraints) Performing minimization step: 4496. Total energy = 981.3788 kcal/mol (978.4606 without restraints) Performing minimization step: 4497. Total energy = 981.3112 kcal/mol (978.3939 without restraints) Performing minimization step: 4498. Total energy = 981.2436 kcal/mol (978.3272 without restraints) Performing minimization step: 4499. Total energy = 981.1762 kcal/mol (978.2608 without restraints) Performing minimization step: 4500. Total energy = 981.1086 kcal/mol (978.1941 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/97a58f6c/tmp/complex_refx/complex_refx.pdb ...Done. Performing minimization step: 4501. Total energy = 981.0411 kcal/mol (978.1275 without restraints) Performing minimization step: 4502. Total energy = 980.9741 kcal/mol (978.0614 without restraints) Performing minimization step: 4503. Total energy = 980.9071 kcal/mol (977.9954 without restraints) Performing minimization step: 4504. Total energy = 980.8399 kcal/mol (977.9291 without restraints) Performing minimization step: 4505. Total energy = 980.7726 kcal/mol (977.8627 without restraints) Performing minimization step: 4506. Total energy = 980.7053 kcal/mol (977.7963 without restraints) Performing minimization step: 4507. Total energy = 980.6381 kcal/mol (977.7300 without restraints) Performing minimization step: 4508. Total energy = 980.5706 kcal/mol (977.6635 without restraints) Performing minimization step: 4509. Total energy = 980.5036 kcal/mol (977.5974 without restraints) Performing minimization step: 4510. Total energy = 980.4365 kcal/mol (977.5312 without restraints) Performing minimization step: 4511. Total energy = 980.3696 kcal/mol (977.4653 without restraints) Performing minimization step: 4512. Total energy = 980.3028 kcal/mol (977.3993 without restraints) Performing minimization step: 4513. Total energy = 980.2355 kcal/mol (977.3330 without restraints) Performing minimization step: 4514. Total energy = 980.1685 kcal/mol (977.2669 without restraints) Performing minimization step: 4515. Total energy = 980.1014 kcal/mol (977.2007 without restraints) Performing minimization step: 4516. Total energy = 980.0347 kcal/mol (977.1349 without restraints) Performing minimization step: 4517. Total energy = 979.9676 kcal/mol (977.0687 without restraints) Performing minimization step: 4518. Total energy = 979.9007 kcal/mol (977.0027 without restraints) Performing minimization step: 4519. Total energy = 979.8339 kcal/mol (976.9368 without restraints) Performing minimization step: 4520. Total energy = 979.7671 kcal/mol (976.8710 without restraints) Performing minimization step: 4521. Total energy = 979.7003 kcal/mol (976.8050 without restraints) Performing minimization step: 4522. Total energy = 979.6336 kcal/mol (976.7393 without restraints) Performing minimization step: 4523. Total energy = 979.5670 kcal/mol (976.6735 without restraints) Performing minimization step: 4524. Total energy = 979.5003 kcal/mol (976.6078 without restraints) Performing minimization step: 4525. Total energy = 979.4342 kcal/mol (976.5426 without restraints) Performing minimization step: 4526. Total energy = 979.3680 kcal/mol (976.4772 without restraints) Performing minimization step: 4527. Total energy = 979.3014 kcal/mol (976.4116 without restraints) Performing minimization step: 4528. Total energy = 979.2346 kcal/mol (976.3456 without restraints) Performing minimization step: 4529. Total energy = 979.1679 kcal/mol (976.2798 without restraints) Performing minimization step: 4530. Total energy = 979.1019 kcal/mol (976.2148 without restraints) Performing minimization step: 4531. Total energy = 979.0356 kcal/mol (976.1494 without restraints) Performing minimization step: 4532. Total energy = 978.9698 kcal/mol (976.0844 without restraints) Performing minimization step: 4533. Total energy = 978.9036 kcal/mol (976.0192 without restraints) Performing minimization step: 4534. Total energy = 978.8376 kcal/mol (975.9540 without restraints) Performing minimization step: 4535. Total energy = 978.7714 kcal/mol (975.8887 without restraints) Performing minimization step: 4536. Total energy = 978.7050 kcal/mol (975.8232 without restraints) Performing minimization step: 4537. Total energy = 978.6387 kcal/mol (975.7578 without restraints) Performing minimization step: 4538. Total energy = 978.5728 kcal/mol (975.6928 without restraints) Performing minimization step: 4539. Total energy = 978.5069 kcal/mol (975.6278 without restraints) Performing minimization step: 4540. Total energy = 978.4411 kcal/mol (975.5629 without restraints) Performing minimization step: 4541. Total energy = 978.3754 kcal/mol (975.4980 without restraints) Performing minimization step: 4542. Total energy = 978.3093 kcal/mol (975.4328 without restraints) Performing minimization step: 4543. Total energy = 978.2433 kcal/mol (975.3677 without restraints) Performing minimization step: 4544. Total energy = 978.1774 kcal/mol (975.3027 without restraints) Performing minimization step: 4545. Total energy = 978.1118 kcal/mol (975.2380 without restraints) Performing minimization step: 4546. Total energy = 978.0460 kcal/mol (975.1731 without restraints) Performing minimization step: 4547. Total energy = 977.9804 kcal/mol (975.1084 without restraints) Performing minimization step: 4548. Total energy = 977.9147 kcal/mol (975.0435 without restraints) Performing minimization step: 4549. Total energy = 977.8490 kcal/mol (974.9786 without restraints) Performing minimization step: 4550. Total energy = 977.7834 kcal/mol (974.9140 without restraints) Performing minimization step: 4551. Total energy = 977.7179 kcal/mol (974.8494 without restraints) Performing minimization step: 4552. Total energy = 977.6520 kcal/mol (974.7844 without restraints) Performing minimization step: 4553. Total energy = 977.5867 kcal/mol (974.7201 without restraints) Performing minimization step: 4554. Total energy = 977.5212 kcal/mol (974.6552 without restraints) Performing minimization step: 4555. Total energy = 977.4560 kcal/mol (974.5910 without restraints) Performing minimization step: 4556. Total energy = 977.3908 kcal/mol (974.5266 without restraints) Performing minimization step: 4557. Total energy = 977.3255 kcal/mol (974.4622 without restraints) Performing minimization step: 4558. Total energy = 977.2602 kcal/mol (974.3978 without restraints) Performing minimization step: 4559. Total energy = 977.1949 kcal/mol (974.3334 without restraints) Performing minimization step: 4560. Total energy = 977.1297 kcal/mol (974.2690 without restraints) Performing minimization step: 4561. Total energy = 977.0648 kcal/mol (974.2049 without restraints) Performing minimization step: 4562. Total energy = 976.9996 kcal/mol (974.1406 without restraints) Performing minimization step: 4563. Total energy = 976.9348 kcal/mol (974.0768 without restraints) Performing minimization step: 4564. Total energy = 976.8700 kcal/mol (974.0127 without restraints) Performing minimization step: 4565. Total energy = 976.8050 kcal/mol (973.9485 without restraints) Performing minimization step: 4566. Total energy = 976.7400 kcal/mol (973.8845 without restraints) Performing minimization step: 4567. Total energy = 976.6754 kcal/mol (973.8207 without restraints) Performing minimization step: 4568. Total energy = 976.6106 kcal/mol (973.7567 without restraints) Performing minimization step: 4569. Total energy = 976.5457 kcal/mol (973.6927 without restraints) Performing minimization step: 4570. Total energy = 976.4808 kcal/mol (973.6287 without restraints) Performing minimization step: 4571. Total energy = 976.4164 kcal/mol (973.5651 without restraints) Performing minimization step: 4572. Total energy = 976.3516 kcal/mol (973.5012 without restraints) Performing minimization step: 4573. Total energy = 976.2868 kcal/mol (973.4372 without restraints) Performing minimization step: 4574. Total energy = 976.2222 kcal/mol (973.3735 without restraints) Performing minimization step: 4575. Total energy = 976.1575 kcal/mol (973.3097 without restraints) Performing minimization step: 4576. Total energy = 976.0929 kcal/mol (973.2459 without restraints) Performing minimization step: 4577. Total energy = 976.0282 kcal/mol (973.1821 without restraints) Performing minimization step: 4578. Total energy = 975.9637 kcal/mol (973.1184 without restraints) Performing minimization step: 4579. Total energy = 975.8991 kcal/mol (973.0546 without restraints) Performing minimization step: 4580. Total energy = 975.8346 kcal/mol (972.9909 without restraints) Performing minimization step: 4581. Total energy = 975.7701 kcal/mol (972.9274 without restraints) Performing minimization step: 4582. Total energy = 975.7057 kcal/mol (972.8638 without restraints) Performing minimization step: 4583. Total energy = 975.6412 kcal/mol (972.8002 without restraints) Performing minimization step: 4584. Total energy = 975.5769 kcal/mol (972.7368 without restraints) Performing minimization step: 4585. Total energy = 975.5127 kcal/mol (972.6733 without restraints) Performing minimization step: 4586. Total energy = 975.4486 kcal/mol (972.6101 without restraints) Performing minimization step: 4587. Total energy = 975.3844 kcal/mol (972.5467 without restraints) Performing minimization step: 4588. Total energy = 975.3199 kcal/mol (972.4830 without restraints) Performing minimization step: 4589. Total energy = 975.2556 kcal/mol (972.4196 without restraints) Performing minimization step: 4590. Total energy = 975.1914 kcal/mol (972.3562 without restraints) Performing minimization step: 4591. Total energy = 975.1272 kcal/mol (972.2928 without restraints) Performing minimization step: 4592. Total energy = 975.0634 kcal/mol (972.2299 without restraints) Performing minimization step: 4593. Total energy = 974.9994 kcal/mol (972.1667 without restraints) Performing minimization step: 4594. Total energy = 974.9351 kcal/mol (972.1030 without restraints) Performing minimization step: 4595. Total energy = 974.8709 kcal/mol (972.0399 without restraints) Performing minimization step: 4596. Total energy = 974.8069 kcal/mol (971.9767 without restraints) Performing minimization step: 4597. Total energy = 974.7432 kcal/mol (971.9138 without restraints) Performing minimization step: 4598. Total energy = 974.6793 kcal/mol (971.8508 without restraints) Performing minimization step: 4599. Total energy = 974.6155 kcal/mol (971.7878 without restraints) Performing minimization step: 4600. Total energy = 974.5517 kcal/mol (971.7248 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/97a58f6c/tmp/complex_refx/complex_refx.pdb ...Done. Performing minimization step: 4601. Total energy = 974.4883 kcal/mol (971.6622 without restraints) Performing minimization step: 4602. Total energy = 974.4245 kcal/mol (971.5993 without restraints) Performing minimization step: 4603. Total energy = 974.3606 kcal/mol (971.5362 without restraints) Performing minimization step: 4604. Total energy = 974.2971 kcal/mol (971.4735 without restraints) Performing minimization step: 4605. Total energy = 974.2337 kcal/mol (971.4109 without restraints) Performing minimization step: 4606. Total energy = 974.1701 kcal/mol (971.3481 without restraints) Performing minimization step: 4607. Total energy = 974.1065 kcal/mol (971.2853 without restraints) Performing minimization step: 4608. Total energy = 974.0427 kcal/mol (971.2224 without restraints) Performing minimization step: 4609. Total energy = 973.9793 kcal/mol (971.1598 without restraints) Performing minimization step: 4610. Total energy = 973.9155 kcal/mol (971.0969 without restraints) Performing minimization step: 4611. Total energy = 973.8521 kcal/mol (971.0343 without restraints) Performing minimization step: 4612. Total energy = 973.7887 kcal/mol (970.9716 without restraints) Performing minimization step: 4613. Total energy = 973.7253 kcal/mol (970.9091 without restraints) Performing minimization step: 4614. Total energy = 973.6620 kcal/mol (970.8466 without restraints) Performing minimization step: 4615. Total energy = 973.5987 kcal/mol (970.7841 without restraints) Performing minimization step: 4616. Total energy = 973.5354 kcal/mol (970.7216 without restraints) Performing minimization step: 4617. Total energy = 973.4726 kcal/mol (970.6598 without restraints) Performing minimization step: 4618. Total energy = 973.4093 kcal/mol (970.5971 without restraints) Performing minimization step: 4619. Total energy = 973.3462 kcal/mol (970.5348 without restraints) Performing minimization step: 4620. Total energy = 973.2832 kcal/mol (970.4727 without restraints) Performing minimization step: 4621. Total energy = 973.2206 kcal/mol (970.4109 without restraints) Performing minimization step: 4622. Total energy = 973.1578 kcal/mol (970.3488 without restraints) Performing minimization step: 4623. Total energy = 973.0948 kcal/mol (970.2866 without restraints) Performing minimization step: 4624. Total energy = 973.0318 kcal/mol (970.2245 without restraints) Performing minimization step: 4625. Total energy = 972.9689 kcal/mol (970.1623 without restraints) Performing minimization step: 4626. Total energy = 972.9060 kcal/mol (970.1002 without restraints) Performing minimization step: 4627. Total energy = 972.8431 kcal/mol (970.0384 without restraints) Performing minimization step: 4628. Total energy = 972.7805 kcal/mol (969.9763 without restraints) Performing minimization step: 4629. Total energy = 972.7177 kcal/mol (969.9143 without restraints) Performing minimization step: 4630. Total energy = 972.6555 kcal/mol (969.8529 without restraints) Performing minimization step: 4631. Total energy = 972.5928 kcal/mol (969.7910 without restraints) Performing minimization step: 4632. Total energy = 972.5301 kcal/mol (969.7292 without restraints) Performing minimization step: 4633. Total energy = 972.4675 kcal/mol (969.6673 without restraints) Performing minimization step: 4634. Total energy = 972.4049 kcal/mol (969.6055 without restraints) Performing minimization step: 4635. Total energy = 972.3423 kcal/mol (969.5438 without restraints) Performing minimization step: 4636. Total energy = 972.2800 kcal/mol (969.4822 without restraints) Performing minimization step: 4637. Total energy = 972.2173 kcal/mol (969.4203 without restraints) Performing minimization step: 4638. Total energy = 972.1548 kcal/mol (969.3586 without restraints) Performing minimization step: 4639. Total energy = 972.0925 kcal/mol (969.2970 without restraints) Performing minimization step: 4640. Total energy = 972.0300 kcal/mol (969.2354 without restraints) Performing minimization step: 4641. Total energy = 971.9677 kcal/mol (969.1738 without restraints) Performing minimization step: 4642. Total energy = 971.9055 kcal/mol (969.1124 without restraints) Performing minimization step: 4643. Total energy = 971.8432 kcal/mol (969.0509 without restraints) Performing minimization step: 4644. Total energy = 971.7809 kcal/mol (968.9894 without restraints) Performing minimization step: 4645. Total energy = 971.7186 kcal/mol (968.9279 without restraints) Performing minimization step: 4646. Total energy = 971.6566 kcal/mol (968.8667 without restraints) Performing minimization step: 4647. Total energy = 971.5944 kcal/mol (968.8053 without restraints) Performing minimization step: 4648. Total energy = 971.5323 kcal/mol (968.7440 without restraints) Performing minimization step: 4649. Total energy = 971.4702 kcal/mol (968.6827 without restraints) Performing minimization step: 4650. Total energy = 971.4082 kcal/mol (968.6214 without restraints) Performing minimization step: 4651. Total energy = 971.3461 kcal/mol (968.5600 without restraints) Performing minimization step: 4652. Total energy = 971.2836 kcal/mol (968.4984 without restraints) Performing minimization step: 4653. Total energy = 971.2218 kcal/mol (968.4375 without restraints) Performing minimization step: 4654. Total energy = 971.1598 kcal/mol (968.3761 without restraints) Performing minimization step: 4655. Total energy = 971.0979 kcal/mol (968.3150 without restraints) Performing minimization step: 4656. Total energy = 971.0361 kcal/mol (968.2539 without restraints) Performing minimization step: 4657. Total energy = 970.9742 kcal/mol (968.1929 without restraints) Performing minimization step: 4658. Total energy = 970.9124 kcal/mol (968.1318 without restraints) Performing minimization step: 4659. Total energy = 970.8506 kcal/mol (968.0707 without restraints) Performing minimization step: 4660. Total energy = 970.7888 kcal/mol (968.0097 without restraints) Performing minimization step: 4661. Total energy = 970.7269 kcal/mol (967.9486 without restraints) Performing minimization step: 4662. Total energy = 970.6652 kcal/mol (967.8877 without restraints) Performing minimization step: 4663. Total energy = 970.6036 kcal/mol (967.8268 without restraints) Performing minimization step: 4664. Total energy = 970.5422 kcal/mol (967.7662 without restraints) Performing minimization step: 4665. Total energy = 970.4811 kcal/mol (967.7059 without restraints) Performing minimization step: 4666. Total energy = 970.4198 kcal/mol (967.6453 without restraints) Performing minimization step: 4667. Total energy = 970.3581 kcal/mol (967.5844 without restraints) Performing minimization step: 4668. Total energy = 970.2971 kcal/mol (967.5241 without restraints) Performing minimization step: 4669. Total energy = 970.2357 kcal/mol (967.4635 without restraints) Performing minimization step: 4670. Total energy = 970.1743 kcal/mol (967.4028 without restraints) Performing minimization step: 4671. Total energy = 970.1129 kcal/mol (967.3422 without restraints) Performing minimization step: 4672. Total energy = 970.0518 kcal/mol (967.2819 without restraints) Performing minimization step: 4673. Total energy = 969.9905 kcal/mol (967.2214 without restraints) Performing minimization step: 4674. Total energy = 969.9299 kcal/mol (967.1615 without restraints) Performing minimization step: 4675. Total energy = 969.8689 kcal/mol (967.1012 without restraints) Performing minimization step: 4676. Total energy = 969.8077 kcal/mol (967.0408 without restraints) Performing minimization step: 4677. Total energy = 969.7466 kcal/mol (966.9804 without restraints) Performing minimization step: 4678. Total energy = 969.6857 kcal/mol (966.9203 without restraints) Performing minimization step: 4679. Total energy = 969.6246 kcal/mol (966.8600 without restraints) Performing minimization step: 4680. Total energy = 969.5637 kcal/mol (966.8000 without restraints) Performing minimization step: 4681. Total energy = 969.5029 kcal/mol (966.7398 without restraints) Performing minimization step: 4682. Total energy = 969.4419 kcal/mol (966.6795 without restraints) Performing minimization step: 4683. Total energy = 969.3809 kcal/mol (966.6193 without restraints) Performing minimization step: 4684. Total energy = 969.3200 kcal/mol (966.5591 without restraints) Performing minimization step: 4685. Total energy = 969.2593 kcal/mol (966.4991 without restraints) Performing minimization step: 4686. Total energy = 969.1984 kcal/mol (966.4390 without restraints) Performing minimization step: 4687. Total energy = 969.1376 kcal/mol (966.3791 without restraints) Performing minimization step: 4688. Total energy = 969.0768 kcal/mol (966.3188 without restraints) Performing minimization step: 4689. Total energy = 969.0160 kcal/mol (966.2588 without restraints) Performing minimization step: 4690. Total energy = 968.9555 kcal/mol (966.1991 without restraints) Performing minimization step: 4691. Total energy = 968.8951 kcal/mol (966.1394 without restraints) Performing minimization step: 4692. Total energy = 968.8344 kcal/mol (966.0795 without restraints) Performing minimization step: 4693. Total energy = 968.7736 kcal/mol (966.0194 without restraints) Performing minimization step: 4694. Total energy = 968.7130 kcal/mol (965.9596 without restraints) Performing minimization step: 4695. Total energy = 968.6529 kcal/mol (965.9002 without restraints) Performing minimization step: 4696. Total energy = 968.5924 kcal/mol (965.8404 without restraints) Performing minimization step: 4697. Total energy = 968.5317 kcal/mol (965.7805 without restraints) Performing minimization step: 4698. Total energy = 968.4716 kcal/mol (965.7211 without restraints) Performing minimization step: 4699. Total energy = 968.4113 kcal/mol (965.6615 without restraints) Performing minimization step: 4700. Total energy = 968.3509 kcal/mol (965.6018 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/97a58f6c/tmp/complex_refx/complex_refx.pdb ...Done. Performing minimization step: 4701. Total energy = 968.2912 kcal/mol (965.5431 without restraints) Performing minimization step: 4702. Total energy = 968.2313 kcal/mol (965.4836 without restraints) Performing minimization step: 4703. Total energy = 968.1714 kcal/mol (965.4246 without restraints) Performing minimization step: 4704. Total energy = 968.1111 kcal/mol (965.3650 without restraints) Performing minimization step: 4705. Total energy = 968.0512 kcal/mol (965.3057 without restraints) Performing minimization step: 4706. Total energy = 967.9910 kcal/mol (965.2463 without restraints) Performing minimization step: 4707. Total energy = 967.9310 kcal/mol (965.1870 without restraints) Performing minimization step: 4708. Total energy = 967.8710 kcal/mol (965.1278 without restraints) Performing minimization step: 4709. Total energy = 967.8109 kcal/mol (965.0683 without restraints) Performing minimization step: 4710. Total energy = 967.7508 kcal/mol (965.0090 without restraints) Performing minimization step: 4711. Total energy = 967.6907 kcal/mol (964.9495 without restraints) Performing minimization step: 4712. Total energy = 967.6306 kcal/mol (964.8902 without restraints) Performing minimization step: 4713. Total energy = 967.5706 kcal/mol (964.8310 without restraints) Performing minimization step: 4714. Total energy = 967.5107 kcal/mol (964.7718 without restraints) Performing minimization step: 4715. Total energy = 967.4506 kcal/mol (964.7124 without restraints) Performing minimization step: 4716. Total energy = 967.3907 kcal/mol (964.6532 without restraints) Performing minimization step: 4717. Total energy = 967.3308 kcal/mol (964.5939 without restraints) Performing minimization step: 4718. Total energy = 967.2711 kcal/mol (964.5350 without restraints) Performing minimization step: 4719. Total energy = 967.2113 kcal/mol (964.4760 without restraints) Performing minimization step: 4720. Total energy = 967.1517 kcal/mol (964.4170 without restraints) Performing minimization step: 4721. Total energy = 967.0920 kcal/mol (964.3581 without restraints) Performing minimization step: 4722. Total energy = 967.0326 kcal/mol (964.2995 without restraints) Performing minimization step: 4723. Total energy = 966.9731 kcal/mol (964.2406 without restraints) Performing minimization step: 4724. Total energy = 966.9135 kcal/mol (964.1817 without restraints) Performing minimization step: 4725. Total energy = 966.8541 kcal/mol (964.1231 without restraints) Performing minimization step: 4726. Total energy = 966.7946 kcal/mol (964.0642 without restraints) Performing minimization step: 4727. Total energy = 966.7355 kcal/mol (964.0060 without restraints) Performing minimization step: 4728. Total energy = 966.6762 kcal/mol (963.9473 without restraints) Performing minimization step: 4729. Total energy = 966.6168 kcal/mol (963.8886 without restraints) Performing minimization step: 4730. Total energy = 966.5575 kcal/mol (963.8300 without restraints) Performing minimization step: 4731. Total energy = 966.4982 kcal/mol (963.7714 without restraints) Performing minimization step: 4732. Total energy = 966.4390 kcal/mol (963.7129 without restraints) Performing minimization step: 4733. Total energy = 966.3797 kcal/mol (963.6543 without restraints) Performing minimization step: 4734. Total energy = 966.3207 kcal/mol (963.5959 without restraints) Performing minimization step: 4735. Total energy = 966.2614 kcal/mol (963.5374 without restraints) Performing minimization step: 4736. Total energy = 966.2022 kcal/mol (963.4789 without restraints) Performing minimization step: 4737. Total energy = 966.1431 kcal/mol (963.4205 without restraints) Performing minimization step: 4738. Total energy = 966.0839 kcal/mol (963.3620 without restraints) Performing minimization step: 4739. Total energy = 966.0248 kcal/mol (963.3036 without restraints) Performing minimization step: 4740. Total energy = 965.9658 kcal/mol (963.2454 without restraints) Performing minimization step: 4741. Total energy = 965.9069 kcal/mol (963.1871 without restraints) Performing minimization step: 4742. Total energy = 965.8479 kcal/mol (963.1287 without restraints) Performing minimization step: 4743. Total energy = 965.7888 kcal/mol (963.0704 without restraints) Performing minimization step: 4744. Total energy = 965.7301 kcal/mol (963.0123 without restraints) Performing minimization step: 4745. Total energy = 965.6714 kcal/mol (962.9543 without restraints) Performing minimization step: 4746. Total energy = 965.6123 kcal/mol (962.8960 without restraints) Performing minimization step: 4747. Total energy = 965.5535 kcal/mol (962.8379 without restraints) Performing minimization step: 4748. Total energy = 965.4948 kcal/mol (962.7798 without restraints) Performing minimization step: 4749. Total energy = 965.4362 kcal/mol (962.7220 without restraints) Performing minimization step: 4750. Total energy = 965.3775 kcal/mol (962.6639 without restraints) Performing minimization step: 4751. Total energy = 965.3188 kcal/mol (962.6059 without restraints) Performing minimization step: 4752. Total energy = 965.2603 kcal/mol (962.5481 without restraints) Performing minimization step: 4753. Total energy = 965.2016 kcal/mol (962.4901 without restraints) Performing minimization step: 4754. Total energy = 965.1433 kcal/mol (962.4324 without restraints) Performing minimization step: 4755. Total energy = 965.0847 kcal/mol (962.3745 without restraints) Performing minimization step: 4756. Total energy = 965.0261 kcal/mol (962.3166 without restraints) Performing minimization step: 4757. Total energy = 964.9676 kcal/mol (962.2589 without restraints) Performing minimization step: 4758. Total energy = 964.9092 kcal/mol (962.2010 without restraints) Performing minimization step: 4759. Total energy = 964.8512 kcal/mol (962.1439 without restraints) Performing minimization step: 4760. Total energy = 964.7929 kcal/mol (962.0861 without restraints) Performing minimization step: 4761. Total energy = 964.7345 kcal/mol (962.0283 without restraints) Performing minimization step: 4762. Total energy = 964.6761 kcal/mol (961.9709 without restraints) Performing minimization step: 4763. Total energy = 964.6183 kcal/mol (961.9136 without restraints) Performing minimization step: 4764. Total energy = 964.5603 kcal/mol (961.8562 without restraints) Performing minimization step: 4765. Total energy = 964.5019 kcal/mol (961.7985 without restraints) Performing minimization step: 4766. Total energy = 964.4437 kcal/mol (961.7409 without restraints) Performing minimization step: 4767. Total energy = 964.3854 kcal/mol (961.6834 without restraints) Performing minimization step: 4768. Total energy = 964.3272 kcal/mol (961.6258 without restraints) Performing minimization step: 4769. Total energy = 964.2695 kcal/mol (961.5688 without restraints) Performing minimization step: 4770. Total energy = 964.2115 kcal/mol (961.5114 without restraints) Performing minimization step: 4771. Total energy = 964.1534 kcal/mol (961.4540 without restraints) Performing minimization step: 4772. Total energy = 964.0955 kcal/mol (961.3970 without restraints) Performing minimization step: 4773. Total energy = 964.0377 kcal/mol (961.3396 without restraints) Performing minimization step: 4774. Total energy = 963.9800 kcal/mol (961.2827 without restraints) Performing minimization step: 4775. Total energy = 963.9221 kcal/mol (961.2254 without restraints) Performing minimization step: 4776. Total energy = 963.8641 kcal/mol (961.1681 without restraints) Performing minimization step: 4777. Total energy = 963.8062 kcal/mol (961.1109 without restraints) Performing minimization step: 4778. Total energy = 963.7488 kcal/mol (961.0541 without restraints) Performing minimization step: 4779. Total energy = 963.6910 kcal/mol (960.9969 without restraints) Performing minimization step: 4780. Total energy = 963.6332 kcal/mol (960.9397 without restraints) Performing minimization step: 4781. Total energy = 963.5754 kcal/mol (960.8826 without restraints) Performing minimization step: 4782. Total energy = 963.5176 kcal/mol (960.8256 without restraints) Performing minimization step: 4783. Total energy = 963.4600 kcal/mol (960.7685 without restraints) Performing minimization step: 4784. Total energy = 963.4026 kcal/mol (960.7119 without restraints) Performing minimization step: 4785. Total energy = 963.3450 kcal/mol (960.6549 without restraints) Performing minimization step: 4786. Total energy = 963.2876 kcal/mol (960.5981 without restraints) Performing minimization step: 4787. Total energy = 963.2300 kcal/mol (960.5412 without restraints) Performing minimization step: 4788. Total energy = 963.1726 kcal/mol (960.4844 without restraints) Performing minimization step: 4789. Total energy = 963.1152 kcal/mol (960.4277 without restraints) Performing minimization step: 4790. Total energy = 963.0577 kcal/mol (960.3709 without restraints) Performing minimization step: 4791. Total energy = 963.0002 kcal/mol (960.3140 without restraints) Performing minimization step: 4792. Total energy = 962.9429 kcal/mol (960.2575 without restraints) Performing minimization step: 4793. Total energy = 962.8856 kcal/mol (960.2007 without restraints) Performing minimization step: 4794. Total energy = 962.8282 kcal/mol (960.1440 without restraints) Performing minimization step: 4795. Total energy = 962.7709 kcal/mol (960.0873 without restraints) Performing minimization step: 4796. Total energy = 962.7135 kcal/mol (960.0306 without restraints) Performing minimization step: 4797. Total energy = 962.6564 kcal/mol (959.9743 without restraints) Performing minimization step: 4798. Total energy = 962.5993 kcal/mol (959.9177 without restraints) Performing minimization step: 4799. Total energy = 962.5421 kcal/mol (959.8611 without restraints) Performing minimization step: 4800. Total energy = 962.4851 kcal/mol (959.8047 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/97a58f6c/tmp/complex_refx/complex_refx.pdb ...Done. Performing minimization step: 4801. Total energy = 962.4279 kcal/mol (959.7482 without restraints) Performing minimization step: 4802. Total energy = 962.3706 kcal/mol (959.6917 without restraints) Performing minimization step: 4803. Total energy = 962.3140 kcal/mol (959.6355 without restraints) Performing minimization step: 4804. Total energy = 962.2573 kcal/mol (959.5795 without restraints) Performing minimization step: 4805. Total energy = 962.2004 kcal/mol (959.5233 without restraints) Performing minimization step: 4806. Total energy = 962.1437 kcal/mol (959.4672 without restraints) Performing minimization step: 4807. Total energy = 962.0869 kcal/mol (959.4110 without restraints) Performing minimization step: 4808. Total energy = 962.0300 kcal/mol (959.3548 without restraints) Performing minimization step: 4809. Total energy = 961.9735 kcal/mol (959.2989 without restraints) Performing minimization step: 4810. Total energy = 961.9169 kcal/mol (959.2429 without restraints) Performing minimization step: 4811. Total energy = 961.8601 kcal/mol (959.1867 without restraints) Performing minimization step: 4812. Total energy = 961.8034 kcal/mol (959.1308 without restraints) Performing minimization step: 4813. Total energy = 961.7471 kcal/mol (959.0752 without restraints) Performing minimization step: 4814. Total energy = 961.6905 kcal/mol (959.0191 without restraints) Performing minimization step: 4815. Total energy = 961.6340 kcal/mol (958.9632 without restraints) Performing minimization step: 4816. Total energy = 961.5771 kcal/mol (958.9068 without restraints) Performing minimization step: 4817. Total energy = 961.5205 kcal/mol (958.8510 without restraints) Performing minimization step: 4818. Total energy = 961.4641 kcal/mol (958.7954 without restraints) Performing minimization step: 4819. Total energy = 961.4077 kcal/mol (958.7394 without restraints) Performing minimization step: 4820. Total energy = 961.3510 kcal/mol (958.6832 without restraints) Performing minimization step: 4821. Total energy = 961.2946 kcal/mol (958.6277 without restraints) Performing minimization step: 4822. Total energy = 961.2383 kcal/mol (958.5719 without restraints) Performing minimization step: 4823. Total energy = 961.1818 kcal/mol (958.5160 without restraints) Performing minimization step: 4824. Total energy = 961.1254 kcal/mol (958.4604 without restraints) Performing minimization step: 4825. Total energy = 961.0693 kcal/mol (958.4048 without restraints) Performing minimization step: 4826. Total energy = 961.0130 kcal/mol (958.3492 without restraints) Performing minimization step: 4827. Total energy = 960.9569 kcal/mol (958.2937 without restraints) Performing minimization step: 4828. Total energy = 960.9011 kcal/mol (958.2384 without restraints) Performing minimization step: 4829. Total energy = 960.8447 kcal/mol (958.1827 without restraints) Performing minimization step: 4830. Total energy = 960.7884 kcal/mol (958.1270 without restraints) Performing minimization step: 4831. Total energy = 960.7322 kcal/mol (958.0714 without restraints) Performing minimization step: 4832. Total energy = 960.6765 kcal/mol (958.0163 without restraints) Performing minimization step: 4833. Total energy = 960.6200 kcal/mol (957.9605 without restraints) Performing minimization step: 4834. Total energy = 960.5638 kcal/mol (957.9049 without restraints) Performing minimization step: 4835. Total energy = 960.5079 kcal/mol (957.8496 without restraints) Performing minimization step: 4836. Total energy = 960.4518 kcal/mol (957.7941 without restraints) Performing minimization step: 4837. Total energy = 960.3965 kcal/mol (957.7394 without restraints) Performing minimization step: 4838. Total energy = 960.3406 kcal/mol (957.6841 without restraints) Performing minimization step: 4839. Total energy = 960.2845 kcal/mol (957.6286 without restraints) Performing minimization step: 4840. Total energy = 960.2284 kcal/mol (957.5732 without restraints) Performing minimization step: 4841. Total energy = 960.1725 kcal/mol (957.5178 without restraints) Performing minimization step: 4842. Total energy = 960.1166 kcal/mol (957.4625 without restraints) Performing minimization step: 4843. Total energy = 960.0607 kcal/mol (957.4073 without restraints) Performing minimization step: 4844. Total energy = 960.0049 kcal/mol (957.3522 without restraints) Performing minimization step: 4845. Total energy = 959.9492 kcal/mol (957.2970 without restraints) Performing minimization step: 4846. Total energy = 959.8934 kcal/mol (957.2418 without restraints) Performing minimization step: 4847. Total energy = 959.8376 kcal/mol (957.1866 without restraints) Performing minimization step: 4848. Total energy = 959.7819 kcal/mol (957.1316 without restraints) Performing minimization step: 4849. Total energy = 959.7262 kcal/mol (957.0764 without restraints) Performing minimization step: 4850. Total energy = 959.6706 kcal/mol (957.0215 without restraints) Performing minimization step: 4851. Total energy = 959.6150 kcal/mol (956.9664 without restraints) Performing minimization step: 4852. Total energy = 959.5595 kcal/mol (956.9116 without restraints) Performing minimization step: 4853. Total energy = 959.5037 kcal/mol (956.8563 without restraints) Performing minimization step: 4854. Total energy = 959.4487 kcal/mol (956.8019 without restraints) Performing minimization step: 4855. Total energy = 959.3931 kcal/mol (956.7470 without restraints) Performing minimization step: 4856. Total energy = 959.3378 kcal/mol (956.6922 without restraints) Performing minimization step: 4857. Total energy = 959.2828 kcal/mol (956.6379 without restraints) Performing minimization step: 4858. Total energy = 959.2275 kcal/mol (956.5832 without restraints) Performing minimization step: 4859. Total energy = 959.1723 kcal/mol (956.5285 without restraints) Performing minimization step: 4860. Total energy = 959.1170 kcal/mol (956.4738 without restraints) Performing minimization step: 4861. Total energy = 959.0616 kcal/mol (956.4190 without restraints) Performing minimization step: 4862. Total energy = 959.0064 kcal/mol (956.3644 without restraints) Performing minimization step: 4863. Total energy = 958.9511 kcal/mol (956.3097 without restraints) Performing minimization step: 4864. Total energy = 958.8958 kcal/mol (956.2550 without restraints) Performing minimization step: 4865. Total energy = 958.8410 kcal/mol (956.2008 without restraints) Performing minimization step: 4866. Total energy = 958.7858 kcal/mol (956.1462 without restraints) Performing minimization step: 4867. Total energy = 958.7307 kcal/mol (956.0916 without restraints) Performing minimization step: 4868. Total energy = 958.6758 kcal/mol (956.0375 without restraints) Performing minimization step: 4869. Total energy = 958.6208 kcal/mol (955.9829 without restraints) Performing minimization step: 4870. Total energy = 958.5661 kcal/mol (955.9288 without restraints) Performing minimization step: 4871. Total energy = 958.5116 kcal/mol (955.8749 without restraints) Performing minimization step: 4872. Total energy = 958.4566 kcal/mol (955.8205 without restraints) Performing minimization step: 4873. Total energy = 958.4016 kcal/mol (955.7661 without restraints) Performing minimization step: 4874. Total energy = 958.3463 kcal/mol (955.7112 without restraints) Performing minimization step: 4875. Total energy = 958.2913 kcal/mol (955.6569 without restraints) Performing minimization step: 4876. Total energy = 958.2364 kcal/mol (955.6026 without restraints) Performing minimization step: 4877. Total energy = 958.1815 kcal/mol (955.5483 without restraints) Performing minimization step: 4878. Total energy = 958.1264 kcal/mol (955.4938 without restraints) Performing minimization step: 4879. Total energy = 958.0717 kcal/mol (955.4398 without restraints) Performing minimization step: 4880. Total energy = 958.0170 kcal/mol (955.3854 without restraints) Performing minimization step: 4881. Total energy = 957.9621 kcal/mol (955.3312 without restraints) Performing minimization step: 4882. Total energy = 957.9073 kcal/mol (955.2770 without restraints) Performing minimization step: 4883. Total energy = 957.8526 kcal/mol (955.2229 without restraints) Performing minimization step: 4884. Total energy = 957.7982 kcal/mol (955.1690 without restraints) Performing minimization step: 4885. Total energy = 957.7435 kcal/mol (955.1149 without restraints) Performing minimization step: 4886. Total energy = 957.6888 kcal/mol (955.0608 without restraints) Performing minimization step: 4887. Total energy = 957.6345 kcal/mol (955.0071 without restraints) Performing minimization step: 4888. Total energy = 957.5799 kcal/mol (954.9531 without restraints) Performing minimization step: 4889. Total energy = 957.5255 kcal/mol (954.8992 without restraints) Performing minimization step: 4890. Total energy = 957.4711 kcal/mol (954.8454 without restraints) Performing minimization step: 4891. Total energy = 957.4167 kcal/mol (954.7915 without restraints) Performing minimization step: 4892. Total energy = 957.3623 kcal/mol (954.7378 without restraints) Performing minimization step: 4893. Total energy = 957.3080 kcal/mol (954.6840 without restraints) Performing minimization step: 4894. Total energy = 957.2536 kcal/mol (954.6302 without restraints) Performing minimization step: 4895. Total energy = 957.1992 kcal/mol (954.5763 without restraints) Performing minimization step: 4896. Total energy = 957.1449 kcal/mol (954.5226 without restraints) Performing minimization step: 4897. Total energy = 957.0907 kcal/mol (954.4690 without restraints) Performing minimization step: 4898. Total energy = 957.0364 kcal/mol (954.4151 without restraints) Performing minimization step: 4899. Total energy = 956.9824 kcal/mol (954.3618 without restraints) Performing minimization step: 4900. Total energy = 956.9284 kcal/mol (954.3083 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/97a58f6c/tmp/complex_refx/complex_refx.pdb ...Done. Performing minimization step: 4901. Total energy = 956.8741 kcal/mol (954.2546 without restraints) Performing minimization step: 4902. Total energy = 956.8199 kcal/mol (954.2010 without restraints) Performing minimization step: 4903. Total energy = 956.7661 kcal/mol (954.1479 without restraints) Performing minimization step: 4904. Total energy = 956.7121 kcal/mol (954.0944 without restraints) Performing minimization step: 4905. Total energy = 956.6581 kcal/mol (954.0409 without restraints) Performing minimization step: 4906. Total energy = 956.6041 kcal/mol (953.9874 without restraints) Performing minimization step: 4907. Total energy = 956.5499 kcal/mol (953.9337 without restraints) Performing minimization step: 4908. Total energy = 956.4959 kcal/mol (953.8803 without restraints) Performing minimization step: 4909. Total energy = 956.4419 kcal/mol (953.8269 without restraints) Performing minimization step: 4910. Total energy = 956.3880 kcal/mol (953.7736 without restraints) Performing minimization step: 4911. Total energy = 956.3342 kcal/mol (953.7203 without restraints) Performing minimization step: 4912. Total energy = 956.2803 kcal/mol (953.6670 without restraints) Performing minimization step: 4913. Total energy = 956.2264 kcal/mol (953.6137 without restraints) Performing minimization step: 4914. Total energy = 956.1727 kcal/mol (953.5605 without restraints) Performing minimization step: 4915. Total energy = 956.1189 kcal/mol (953.5073 without restraints) Performing minimization step: 4916. Total energy = 956.0653 kcal/mol (953.4543 without restraints) Performing minimization step: 4917. Total energy = 956.0118 kcal/mol (953.4013 without restraints) Performing minimization step: 4918. Total energy = 955.9584 kcal/mol (953.3484 without restraints) Performing minimization step: 4919. Total energy = 955.9051 kcal/mol (953.2956 without restraints) Performing minimization step: 4920. Total energy = 955.8520 kcal/mol (953.2431 without restraints) Performing minimization step: 4921. Total energy = 955.7986 kcal/mol (953.1903 without restraints) Performing minimization step: 4922. Total energy = 955.7450 kcal/mol (953.1372 without restraints) Performing minimization step: 4923. Total energy = 955.6922 kcal/mol (953.0849 without restraints) Performing minimization step: 4924. Total energy = 955.6386 kcal/mol (953.0319 without restraints) Performing minimization step: 4925. Total energy = 955.5849 kcal/mol (952.9787 without restraints) Performing minimization step: 4926. Total energy = 955.5323 kcal/mol (952.9267 without restraints) Performing minimization step: 4927. Total energy = 955.4791 kcal/mol (952.8740 without restraints) Performing minimization step: 4928. Total energy = 955.4257 kcal/mol (952.8212 without restraints) Performing minimization step: 4929. Total energy = 955.3723 kcal/mol (952.7683 without restraints) Performing minimization step: 4930. Total energy = 955.3190 kcal/mol (952.7155 without restraints) Performing minimization step: 4931. Total energy = 955.2660 kcal/mol (952.6631 without restraints) Performing minimization step: 4932. Total energy = 955.2125 kcal/mol (952.6101 without restraints) Performing minimization step: 4933. Total energy = 955.1593 kcal/mol (952.5574 without restraints) Performing minimization step: 4934. Total energy = 955.1058 kcal/mol (952.5045 without restraints) Performing minimization step: 4935. Total energy = 955.0526 kcal/mol (952.4518 without restraints) Performing minimization step: 4936. Total energy = 954.9994 kcal/mol (952.3992 without restraints) Performing minimization step: 4937. Total energy = 954.9462 kcal/mol (952.3465 without restraints) Performing minimization step: 4938. Total energy = 954.8931 kcal/mol (952.2940 without restraints) Performing minimization step: 4939. Total energy = 954.8401 kcal/mol (952.2414 without restraints) Performing minimization step: 4940. Total energy = 954.7870 kcal/mol (952.1888 without restraints) Performing minimization step: 4941. Total energy = 954.7338 kcal/mol (952.1363 without restraints) Performing minimization step: 4942. Total energy = 954.6807 kcal/mol (952.0836 without restraints) Performing minimization step: 4943. Total energy = 954.6275 kcal/mol (952.0310 without restraints) Performing minimization step: 4944. Total energy = 954.5747 kcal/mol (951.9788 without restraints) Performing minimization step: 4945. Total energy = 954.5220 kcal/mol (951.9266 without restraints) Performing minimization step: 4946. Total energy = 954.4693 kcal/mol (951.8744 without restraints) Performing minimization step: 4947. Total energy = 954.4166 kcal/mol (951.8223 without restraints) Performing minimization step: 4948. Total energy = 954.3638 kcal/mol (951.7700 without restraints) Performing minimization step: 4949. Total energy = 954.3116 kcal/mol (951.7183 without restraints) Performing minimization step: 4950. Total energy = 954.2590 kcal/mol (951.6663 without restraints) Performing minimization step: 4951. Total energy = 954.2067 kcal/mol (951.6145 without restraints) Performing minimization step: 4952. Total energy = 954.1541 kcal/mol (951.5623 without restraints) Performing minimization step: 4953. Total energy = 954.1016 kcal/mol (951.5103 without restraints) Performing minimization step: 4954. Total energy = 954.0489 kcal/mol (951.4582 without restraints) Performing minimization step: 4955. Total energy = 953.9962 kcal/mol (951.4059 without restraints) Performing minimization step: 4956. Total energy = 953.9434 kcal/mol (951.3538 without restraints) Performing minimization step: 4957. Total energy = 953.8909 kcal/mol (951.3017 without restraints) Performing minimization step: 4958. Total energy = 953.8384 kcal/mol (951.2498 without restraints) Performing minimization step: 4959. Total energy = 953.7859 kcal/mol (951.1978 without restraints) Performing minimization step: 4960. Total energy = 953.7334 kcal/mol (951.1458 without restraints) Performing minimization step: 4961. Total energy = 953.6811 kcal/mol (951.0940 without restraints) Performing minimization step: 4962. Total energy = 953.6290 kcal/mol (951.0425 without restraints) Performing minimization step: 4963. Total energy = 953.5766 kcal/mol (950.9908 without restraints) Performing minimization step: 4964. Total energy = 953.5247 kcal/mol (950.9392 without restraints) Performing minimization step: 4965. Total energy = 953.4723 kcal/mol (950.8873 without restraints) Performing minimization step: 4966. Total energy = 953.4200 kcal/mol (950.8355 without restraints) Performing minimization step: 4967. Total energy = 953.3678 kcal/mol (950.7838 without restraints) Performing minimization step: 4968. Total energy = 953.3155 kcal/mol (950.7320 without restraints) Performing minimization step: 4969. Total energy = 953.2632 kcal/mol (950.6802 without restraints) Performing minimization step: 4970. Total energy = 953.2112 kcal/mol (950.6288 without restraints) Performing minimization step: 4971. Total energy = 953.1590 kcal/mol (950.5771 without restraints) Performing minimization step: 4972. Total energy = 953.1068 kcal/mol (950.5254 without restraints) Performing minimization step: 4973. Total energy = 953.0546 kcal/mol (950.4737 without restraints) Performing minimization step: 4974. Total energy = 953.0025 kcal/mol (950.4222 without restraints) Performing minimization step: 4975. Total energy = 952.9505 kcal/mol (950.3706 without restraints) Performing minimization step: 4976. Total energy = 952.8984 kcal/mol (950.3191 without restraints) Performing minimization step: 4977. Total energy = 952.8464 kcal/mol (950.2675 without restraints) Performing minimization step: 4978. Total energy = 952.7946 kcal/mol (950.2162 without restraints) Performing minimization step: 4979. Total energy = 952.7426 kcal/mol (950.1647 without restraints) Performing minimization step: 4980. Total energy = 952.6910 kcal/mol (950.1138 without restraints) Performing minimization step: 4981. Total energy = 952.6392 kcal/mol (950.0624 without restraints) Performing minimization step: 4982. Total energy = 952.5873 kcal/mol (950.0110 without restraints) Performing minimization step: 4983. Total energy = 952.5354 kcal/mol (949.9596 without restraints) Performing minimization step: 4984. Total energy = 952.4837 kcal/mol (949.9084 without restraints) Performing minimization step: 4985. Total energy = 952.4318 kcal/mol (949.8569 without restraints) Performing minimization step: 4986. Total energy = 952.3799 kcal/mol (949.8056 without restraints) Performing minimization step: 4987. Total energy = 952.3282 kcal/mol (949.7543 without restraints) Performing minimization step: 4988. Total energy = 952.2769 kcal/mol (949.7035 without restraints) Performing minimization step: 4989. Total energy = 952.2254 kcal/mol (949.6526 without restraints) Performing minimization step: 4990. Total energy = 952.1739 kcal/mol (949.6016 without restraints) Performing minimization step: 4991. Total energy = 952.1223 kcal/mol (949.5504 without restraints) Performing minimization step: 4992. Total energy = 952.0705 kcal/mol (949.4990 without restraints) Performing minimization step: 4993. Total energy = 952.0191 kcal/mol (949.4484 without restraints) Performing minimization step: 4994. Total energy = 951.9680 kcal/mol (949.3977 without restraints) Performing minimization step: 4995. Total energy = 951.9166 kcal/mol (949.3467 without restraints) Performing minimization step: 4996. Total energy = 951.8651 kcal/mol (949.2959 without restraints) Performing minimization step: 4997. Total energy = 951.8136 kcal/mol (949.2447 without restraints) Performing minimization step: 4998. Total energy = 951.7623 kcal/mol (949.1939 without restraints) Performing minimization step: 4999. Total energy = 951.7109 kcal/mol (949.1432 without restraints) Performing minimization step: 5000. Total energy = 951.6596 kcal/mol (949.0922 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/97a58f6c/tmp/complex_refx/complex_refx.pdb ...Done. /home/ubuntu/rna-tools//opt/qrnas/ Save to complex_refx.pdb DONE!