============================================================================= Reading config file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e0aaf9ce/tmp/ENST00000618027_refx/configfile.txt ============================================================================= ----------------------------------------------------------------------------- Warning: Non-parallel version of QRNA cannot spawn threads. Warning: More threads than cores available. Parameters to be used: Number of minimization steps (NSTEPS): 5000 Golden section step sizes: maximal (MAXSTEP): 0.0001 minimal (MINSTEP): 1e-08 Verbosity (VERBOSE): 1 Write output every: 100 steps (WRITEFREQ) Record trajectory (TRAJECTORY): disabled Pedantic treatment of molecules (PEDANTICMOL): disabled Van der Waals cutoff radius (CUTOFF): 12 Born generalized solvent (USEBORN): disabled Constraints on secondary struct. (SSCONSTR): enabled Auto-detection of secondary struct. (SSDETECT): enabled Secondary structure (SECSTRUCT): none specified Hydrogen bonds (HBONDS): enabled Electrostatics (ELECTR): enabled van der Waals interactions (VANDERWAALS): enabled Anti-blow-up protection (BLOWGUARD): enabled Occupancy as positional restraint (POSRESTRAINTS): disabled Restraints description (RESTRFILE): none Number of parallel threads: 1 ----------------------------------------------------------------------------- Internal Warning: unknown atom type(s) in bond: C2 H5 Internal Warning: unknown atom type(s) in bond: C2 N* Internal Warning: unknown atom type(s) in bond: C2 NB Internal Warning: unknown atom type(s) in bond: C C1 Internal Warning: unknown atom type(s) in bond: CA C1 Internal Warning: unknown atom type(s) in bond: C1 C1 Internal Warning: unknown atom type(s) in bond: C1 CT Internal Warning: unknown atom type(s) in bond: C1 HA Internal Warning: unknown atom type(s) in bond: C1 H4 Internal Warning: unknown atom type(s) in bond: C1 N* Internal Warning: unknown atoms in angle: H5 C2 N* Internal Warning: unknown atoms in angle: H5 C2 NB Internal Warning: unknown atoms in angle: N* C2 NB Internal Warning: unknown atoms in angle: CB N* C2 Internal Warning: unknown atoms in angle: C2 N* CT Internal Warning: unknown atoms in angle: CB NB C2 Internal Warning: unknown atoms in angle: C1 C NA Internal Warning: unknown atoms in angle: C1 C O Internal Warning: unknown atoms in angle: C1 CA N2 Internal Warning: unknown atoms in angle: C1 CA NC Internal Warning: unknown atoms in angle: C C1 C1 Internal Warning: unknown atoms in angle: C C1 CT Internal Warning: unknown atoms in angle: C C1 HA Internal Warning: unknown atoms in angle: C C1 H4 Internal Warning: unknown atoms in angle: CA C1 C1 Internal Warning: unknown atoms in angle: CA C1 HA Internal Warning: unknown atoms in angle: CA C1 H4 Internal Warning: unknown atoms in angle: C1 C1 CT Internal Warning: unknown atoms in angle: C1 C1 HA Internal Warning: unknown atoms in angle: C1 C1 H4 Internal Warning: unknown atoms in angle: C1 C1 N* Internal Warning: unknown atoms in angle: H4 C1 N* Internal Warning: unknown atoms in angle: H1 CT C1 Internal Warning: unknown atoms in angle: HC CT C1 Internal Warning: unknown atoms in angle: C N* C1 Internal Warning: unknown atoms in angle: C1 N* CT Internal Warning: unknown atom(s) in dihedral: X C2 N* X Internal Warning: unknown atom(s) in dihedral: X C2 NB X Internal Warning: unknown atom(s) in dihedral: X C C1 X Internal Warning: unknown atom(s) in dihedral: X CA C1 X Internal Warning: unknown atom(s) in dihedral: X C1 C1 X Internal Warning: unknown atom(s) in dihedral: X C1 CT X Internal Warning: unknown atom(s) in dihedral: X C1 N* X Internal Warning: unknown atom(s) in dihedral: HC CT C1 C1 Internal Warning: unknown atom(s) in dihedral: HC CT C1 C1 Internal Warning: unknown atom(s) in dihedral: C1 C1 C O Internal Warning: unknown atom(s) in dihedral: C1 C1 C O Internal Warning: unknown atom(s) in dihedral: OS CT N* C2 Internal Warning: unknown atom(s) in dihedral: OS CT N* C2 Internal Warning: unknown atom(s) in dihedral: OS CT N* C2 Internal Warning: unknown atom(s) in dihedral: OS CT N* C1 Internal Warning: unknown atom(s) in dihedral: OS CT N* C1 Internal Warning: unknown atom(s) in dihedral: OS CT N* C1 Internal Warning: unknown atom(s) in dihedral: OS CT N* C1 Internal Warning: unknown atom(s) in improper: C C1 N* CT Internal Warning: unknown atom(s) in improper: C C1 C1 CT Internal Warning: unknown atom(s) in improper: C1 N2 CA NC Initializing... Generic atom descriptions read: 47 Generic bond descriptions read: 199 Generic angle descriptions read: 567 Generic dihedral descriptions read: 812 Generic improper descriptions read: 116 Generic vdW descriptions read: 47 ----------------------------------------------------------------------------- ============================================================================= Reading PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e0aaf9ce/tmp/ENST00000618027_refx/ENST00000618027.pdb ============================================================================= Atom's 3247 H8 residue renamed to RA3 Atom's 3246 H62 residue renamed to RA3 Atom's 3245 H61 residue renamed to RA3 Atom's 3244 H2 residue renamed to RA3 Atom's 3243 HO'2 residue renamed to RA3 Atom's 3242 H2' residue renamed to RA3 Atom's 3241 H1' residue renamed to RA3 Atom's 3240 H3' residue renamed to RA3 Atom's 3239 H4' residue renamed to RA3 Atom's 3238 H5'2 residue renamed to RA3 Atom's 3237 H5'1 residue renamed to RA3 Atom's 3236 N9 residue renamed to RA3 Atom's 3235 C8 residue renamed to RA3 Atom's 3234 N7 residue renamed to RA3 Atom's 3233 N6 residue renamed to RA3 Atom's 3232 C6 residue renamed to RA3 Atom's 3231 C5 residue renamed to RA3 Atom's 3230 C4 residue renamed to RA3 Atom's 3229 N3 residue renamed to RA3 Atom's 3228 C2 residue renamed to RA3 Atom's 3227 N1 residue renamed to RA3 Atom's 3226 O2' residue renamed to RA3 Atom's 3225 C2' residue renamed to RA3 Atom's 3224 C1' residue renamed to RA3 Atom's 3223 O3' residue renamed to RA3 Atom's 3222 C3' residue renamed to RA3 Atom's 3221 O4' residue renamed to RA3 Atom's 3220 C4' residue renamed to RA3 Atom's 3219 C5' residue renamed to RA3 Atom's 3218 O5' residue renamed to RA3 Atom's 3217 OP1 residue renamed to RA3 Atom's 3216 OP2 residue renamed to RA3 Atom's 3215 P residue renamed to RA3 Missing atom added: ATOM 34 H3T RA3 A 101 32.590 0.142 36.962 1.00 0.00 H Missing atom added: ATOM 2 OP3 C A 1 20.269 10.064 26.942 1.00 54.31 O Number of atoms: 3249 Number of residues: 101 Building intraresidual bonds... Building intraresidual angles... Building intraresidual dihedrals... Building intraresidual impropers... Building interresidual bonds... Building interresidual angles... Internal Warning: unknown atoms in angle: H5 C2 N* Internal Warning: unknown atoms in angle: H5 C2 NB Internal Warning: unknown atoms in angle: N* C2 NB Internal Warning: unknown atoms in angle: CB N* C2 Internal Warning: unknown atoms in angle: C2 N* CT Internal Warning: unknown atoms in angle: CB NB C2 Internal Warning: unknown atoms in angle: C1 C NA Internal Warning: unknown atoms in angle: C1 C O Internal Warning: unknown atoms in angle: C1 CA N2 Internal Warning: unknown atoms in angle: C1 CA NC Internal Warning: unknown atoms in angle: C C1 C1 Internal Warning: unknown atoms in angle: C C1 CT Internal Warning: unknown atoms in angle: C C1 HA Internal Warning: unknown atoms in angle: C C1 H4 Internal Warning: unknown atoms in angle: CA C1 C1 Internal Warning: unknown atoms in angle: CA C1 HA Internal Warning: unknown atoms in angle: CA C1 H4 Internal Warning: unknown atoms in angle: C1 C1 CT Internal Warning: unknown atoms in angle: C1 C1 HA Internal Warning: unknown atoms in angle: C1 C1 H4 Internal Warning: unknown atoms in angle: C1 C1 N* Internal Warning: unknown atoms in angle: H4 C1 N* Internal Warning: unknown atoms in angle: H1 CT C1 Internal Warning: unknown atoms in angle: HC CT C1 Internal Warning: unknown atoms in angle: C N* C1 Internal Warning: unknown atoms in angle: C1 N* CT Building interresidual dihedrals... Internal Warning: unknown atom(s) in dihedral: X C2 N* X Internal Warning: unknown atom(s) in dihedral: X C2 NB X Internal Warning: unknown atom(s) in dihedral: X C C1 X Internal Warning: unknown atom(s) in dihedral: X CA C1 X Internal Warning: unknown atom(s) in dihedral: X C1 C1 X Internal Warning: unknown atom(s) in dihedral: X C1 CT X Internal Warning: unknown atom(s) in dihedral: X C1 N* X Internal Warning: unknown atom(s) in dihedral: HC CT C1 C1 Internal Warning: unknown atom(s) in dihedral: HC CT C1 C1 Internal Warning: unknown atom(s) in dihedral: C1 C1 C O Internal Warning: unknown atom(s) in dihedral: C1 C1 C O Internal Warning: unknown atom(s) in dihedral: OS CT N* C2 Internal Warning: unknown atom(s) in dihedral: OS CT N* C2 Internal Warning: unknown atom(s) in dihedral: OS CT N* C2 Internal Warning: unknown atom(s) in dihedral: OS CT N* C1 Internal Warning: unknown atom(s) in dihedral: OS CT N* C1 Internal Warning: unknown atom(s) in dihedral: OS CT N* C1 Internal Warning: unknown atom(s) in dihedral: OS CT N* C1 Number of bonds built: 3507 Number of angles built: 6276 Number of dihedrals built: 9562 Number of impropers built: 693 ----------------------------------------------------------------------------- End of molecule (chain) ----------------------------------------------------------------------------- ----------------------------------------------------------------------------- Building interresidual nonbonded pairs & H-bonds (it may take a while)... Number of electrostatic pairs: 5266593 Number of van der Waals pairs: 389910 Number of H-bonds built: 84 Number of spring restraints: 0 Number of positional restraints: 0 Number of base pairs built: 31 Number of molecules (chains) read: 1 ----------------------------------------------------------------------------- Performing minimization step: 1. Total energy = 7481.7688 kcal/mol (7465.2318 without restraints) Performing minimization step: 2. Total energy = 7466.1184 kcal/mol (7449.5906 without restraints) Performing minimization step: 3. Total energy = 7450.5278 kcal/mol (7434.0087 without restraints) Performing minimization step: 4. Total energy = 7434.9969 kcal/mol (7418.4865 without restraints) Performing minimization step: 5. Total energy = 7419.5251 kcal/mol (7403.0234 without restraints) Performing minimization step: 6. Total energy = 7404.1117 kcal/mol (7387.6187 without restraints) Performing minimization step: 7. Total energy = 7388.7570 kcal/mol (7372.2727 without restraints) Performing minimization step: 8. Total energy = 7373.4610 kcal/mol (7356.9853 without restraints) Performing minimization step: 9. Total energy = 7358.2224 kcal/mol (7341.7553 without restraints) Performing minimization step: 10. Total energy = 7343.0420 kcal/mol (7326.5836 without restraints) Performing minimization step: 11. Total energy = 7327.9187 kcal/mol (7311.4685 without restraints) Performing minimization step: 12. Total energy = 7312.8523 kcal/mol (7296.4105 without restraints) Performing minimization step: 13. Total energy = 7297.8432 kcal/mol (7281.4096 without restraints) Performing minimization step: 14. Total energy = 7282.8900 kcal/mol (7266.4649 without restraints) Performing minimization step: 15. Total energy = 7267.9935 kcal/mol (7251.5767 without restraints) Performing minimization step: 16. Total energy = 7253.1535 kcal/mol (7236.7450 without restraints) Performing minimization step: 17. Total energy = 7238.3697 kcal/mol (7221.9694 without restraints) Performing minimization step: 18. Total energy = 7223.6419 kcal/mol (7207.2498 without restraints) Performing minimization step: 19. Total energy = 7208.9689 kcal/mol (7192.5848 without restraints) Performing minimization step: 20. Total energy = 7194.3517 kcal/mol (7177.9760 without restraints) Performing minimization step: 21. Total energy = 7179.7909 kcal/mol (7163.4233 without restraints) Performing minimization step: 22. Total energy = 7165.2847 kcal/mol (7148.9252 without restraints) Performing minimization step: 23. Total energy = 7150.8338 kcal/mol (7134.4825 without restraints) Performing minimization step: 24. Total energy = 7136.4375 kcal/mol (7120.0943 without restraints) Performing minimization step: 25. Total energy = 7122.0966 kcal/mol (7105.7614 without restraints) Performing minimization step: 26. Total energy = 7107.8106 kcal/mol (7091.4836 without restraints) Performing minimization step: 27. Total energy = 7093.5791 kcal/mol (7077.2600 without restraints) Performing minimization step: 28. Total energy = 7079.4022 kcal/mol (7063.0910 without restraints) Performing minimization step: 29. Total energy = 7065.2795 kcal/mol (7048.9764 without restraints) Performing minimization step: 30. Total energy = 7051.2115 kcal/mol (7034.9163 without restraints) Performing minimization step: 31. Total energy = 7037.1976 kcal/mol (7020.9104 without restraints) Performing minimization step: 32. Total energy = 7023.2381 kcal/mol (7006.9588 without restraints) Performing minimization step: 33. Total energy = 7009.3324 kcal/mol (6993.0610 without restraints) Performing minimization step: 34. Total energy = 6995.4809 kcal/mol (6979.2175 without restraints) Performing minimization step: 35. Total energy = 6981.6827 kcal/mol (6965.4271 without restraints) Performing minimization step: 36. Total energy = 6967.9384 kcal/mol (6951.6909 without restraints) Performing minimization step: 37. Total energy = 6954.2481 kcal/mol (6938.0084 without restraints) Performing minimization step: 38. Total energy = 6940.6112 kcal/mol (6924.3793 without restraints) Performing minimization step: 39. Total energy = 6927.0283 kcal/mol (6910.8043 without restraints) Performing minimization step: 40. Total energy = 6913.4980 kcal/mol (6897.2818 without restraints) Performing minimization step: 41. Total energy = 6900.0212 kcal/mol (6883.8127 without restraints) Performing minimization step: 42. Total energy = 6886.5970 kcal/mol (6870.3963 without restraints) Performing minimization step: 43. Total energy = 6873.2266 kcal/mol (6857.0338 without restraints) Performing minimization step: 44. Total energy = 6859.9091 kcal/mol (6843.7241 without restraints) Performing minimization step: 45. Total energy = 6846.6442 kcal/mol (6830.4670 without restraints) Performing minimization step: 46. Total energy = 6833.4326 kcal/mol (6817.2632 without restraints) Performing minimization step: 47. Total energy = 6820.2734 kcal/mol (6804.1117 without restraints) Performing minimization step: 48. Total energy = 6807.1668 kcal/mol (6791.0130 without restraints) Performing minimization step: 49. Total energy = 6794.1128 kcal/mol (6777.9666 without restraints) Performing minimization step: 50. Total energy = 6781.1106 kcal/mol (6764.9721 without restraints) Performing minimization step: 51. Total energy = 6768.1606 kcal/mol (6752.0298 without restraints) Performing minimization step: 52. Total energy = 6755.2630 kcal/mol (6739.1397 without restraints) Performing minimization step: 53. Total energy = 6742.4180 kcal/mol (6726.3028 without restraints) Performing minimization step: 54. Total energy = 6729.6248 kcal/mol (6713.5172 without restraints) Performing minimization step: 55. Total energy = 6716.8834 kcal/mol (6700.7834 without restraints) Performing minimization step: 56. Total energy = 6704.1940 kcal/mol (6688.1015 without restraints) Performing minimization step: 57. Total energy = 6691.5565 kcal/mol (6675.4718 without restraints) Performing minimization step: 58. Total energy = 6678.9706 kcal/mol (6662.8934 without restraints) Performing minimization step: 59. Total energy = 6666.4361 kcal/mol (6650.3665 without restraints) Performing minimization step: 60. Total energy = 6653.9528 kcal/mol (6637.8910 without restraints) Performing minimization step: 61. Total energy = 6641.5214 kcal/mol (6625.4671 without restraints) Performing minimization step: 62. Total energy = 6629.1411 kcal/mol (6613.0944 without restraints) Performing minimization step: 63. Total energy = 6616.8122 kcal/mol (6600.7731 without restraints) Performing minimization step: 64. Total energy = 6604.5339 kcal/mol (6588.5024 without restraints) Performing minimization step: 65. Total energy = 6592.3071 kcal/mol (6576.2831 without restraints) Performing minimization step: 66. Total energy = 6580.1309 kcal/mol (6564.1145 without restraints) Performing minimization step: 67. Total energy = 6568.0059 kcal/mol (6551.9973 without restraints) Performing minimization step: 68. Total energy = 6555.9313 kcal/mol (6539.9300 without restraints) Performing minimization step: 69. Total energy = 6543.9073 kcal/mol (6527.9135 without restraints) Performing minimization step: 70. Total energy = 6531.9336 kcal/mol (6515.9474 without restraints) Performing minimization step: 71. Total energy = 6520.0100 kcal/mol (6504.0313 without restraints) Performing minimization step: 72. Total energy = 6508.1372 kcal/mol (6492.1658 without restraints) Performing minimization step: 73. Total energy = 6496.3138 kcal/mol (6480.3500 without restraints) Performing minimization step: 74. Total energy = 6484.5406 kcal/mol (6468.5844 without restraints) Performing minimization step: 75. Total energy = 6472.8174 kcal/mol (6456.8686 without restraints) Performing minimization step: 76. Total energy = 6461.1443 kcal/mol (6445.2029 without restraints) Performing minimization step: 77. Total energy = 6449.5210 kcal/mol (6433.5872 without restraints) Performing minimization step: 78. Total energy = 6437.9479 kcal/mol (6422.0215 without restraints) Performing minimization step: 79. Total energy = 6426.4237 kcal/mol (6410.5047 without restraints) Performing minimization step: 80. Total energy = 6414.9483 kcal/mol (6399.0368 without restraints) Performing minimization step: 81. Total energy = 6403.5226 kcal/mol (6387.6183 without restraints) Performing minimization step: 82. Total energy = 6392.1459 kcal/mol (6376.2490 without restraints) Performing minimization step: 83. Total energy = 6380.8187 kcal/mol (6364.9292 without restraints) Performing minimization step: 84. Total energy = 6369.5399 kcal/mol (6353.6577 without restraints) Performing minimization step: 85. Total energy = 6358.3101 kcal/mol (6342.4354 without restraints) Performing minimization step: 86. Total energy = 6347.1293 kcal/mol (6331.2619 without restraints) Performing minimization step: 87. Total energy = 6335.9970 kcal/mol (6320.1370 without restraints) Performing minimization step: 88. Total energy = 6324.9139 kcal/mol (6309.0612 without restraints) Performing minimization step: 89. Total energy = 6313.8784 kcal/mol (6298.0330 without restraints) Performing minimization step: 90. Total energy = 6302.8911 kcal/mol (6287.0530 without restraints) Performing minimization step: 91. Total energy = 6291.9524 kcal/mol (6276.1216 without restraints) Performing minimization step: 92. Total energy = 6281.0615 kcal/mol (6265.2378 without restraints) Performing minimization step: 93. Total energy = 6270.2183 kcal/mol (6254.4019 without restraints) Performing minimization step: 94. Total energy = 6259.4232 kcal/mol (6243.6143 without restraints) Performing minimization step: 95. Total energy = 6248.6759 kcal/mol (6232.8742 without restraints) Performing minimization step: 96. Total energy = 6237.9761 kcal/mol (6222.1815 without restraints) Performing minimization step: 97. Total energy = 6227.3236 kcal/mol (6211.5364 without restraints) Performing minimization step: 98. Total energy = 6216.7185 kcal/mol (6200.9384 without restraints) Performing minimization step: 99. Total energy = 6206.1603 kcal/mol (6190.3873 without restraints) Performing minimization step: 100. Total energy = 6195.6490 kcal/mol (6179.8833 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e0aaf9ce/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 101. Total energy = 6185.1850 kcal/mol (6169.4266 without restraints) Performing minimization step: 102. Total energy = 6174.7683 kcal/mol (6159.0170 without restraints) Performing minimization step: 103. Total energy = 6164.3982 kcal/mol (6148.6542 without restraints) Performing minimization step: 104. Total energy = 6154.0747 kcal/mol (6138.3377 without restraints) Performing minimization step: 105. Total energy = 6143.7977 kcal/mol (6128.0679 without restraints) Performing minimization step: 106. Total energy = 6133.5671 kcal/mol (6117.8444 without restraints) Performing minimization step: 107. Total energy = 6123.3821 kcal/mol (6107.6665 without restraints) Performing minimization step: 108. Total energy = 6113.2439 kcal/mol (6097.5354 without restraints) Performing minimization step: 109. Total energy = 6103.1515 kcal/mol (6087.4501 without restraints) Performing minimization step: 110. Total energy = 6093.1052 kcal/mol (6077.4110 without restraints) Performing minimization step: 111. Total energy = 6083.1044 kcal/mol (6067.4171 without restraints) Performing minimization step: 112. Total energy = 6073.1493 kcal/mol (6057.4691 without restraints) Performing minimization step: 113. Total energy = 6063.2398 kcal/mol (6047.5666 without restraints) Performing minimization step: 114. Total energy = 6053.3757 kcal/mol (6037.7096 without restraints) Performing minimization step: 115. Total energy = 6043.5566 kcal/mol (6027.8975 without restraints) Performing minimization step: 116. Total energy = 6033.7829 kcal/mol (6018.1308 without restraints) Performing minimization step: 117. Total energy = 6024.0536 kcal/mol (6008.4084 without restraints) Performing minimization step: 118. Total energy = 6014.3691 kcal/mol (5998.7309 without restraints) Performing minimization step: 119. Total energy = 6004.7294 kcal/mol (5989.0981 without restraints) Performing minimization step: 120. Total energy = 5995.1342 kcal/mol (5979.5100 without restraints) Performing minimization step: 121. Total energy = 5985.5841 kcal/mol (5969.9668 without restraints) Performing minimization step: 122. Total energy = 5976.0774 kcal/mol (5960.4671 without restraints) Performing minimization step: 123. Total energy = 5966.6154 kcal/mol (5951.0119 without restraints) Performing minimization step: 124. Total energy = 5957.1972 kcal/mol (5941.6006 without restraints) Performing minimization step: 125. Total energy = 5947.8229 kcal/mol (5932.2332 without restraints) Performing minimization step: 126. Total energy = 5938.4922 kcal/mol (5922.9095 without restraints) Performing minimization step: 127. Total energy = 5929.2051 kcal/mol (5913.6292 without restraints) Performing minimization step: 128. Total energy = 5919.9618 kcal/mol (5904.3928 without restraints) Performing minimization step: 129. Total energy = 5910.7618 kcal/mol (5895.1997 without restraints) Performing minimization step: 130. Total energy = 5901.6044 kcal/mol (5886.0490 without restraints) Performing minimization step: 131. Total energy = 5892.4907 kcal/mol (5876.9422 without restraints) Performing minimization step: 132. Total energy = 5883.4193 kcal/mol (5867.8775 without restraints) Performing minimization step: 133. Total energy = 5874.3909 kcal/mol (5858.8559 without restraints) Performing minimization step: 134. Total energy = 5865.4050 kcal/mol (5849.8769 without restraints) Performing minimization step: 135. Total energy = 5856.4618 kcal/mol (5840.9404 without restraints) Performing minimization step: 136. Total energy = 5847.5610 kcal/mol (5832.0464 without restraints) Performing minimization step: 137. Total energy = 5838.7024 kcal/mol (5823.1945 without restraints) Performing minimization step: 138. Total energy = 5829.8856 kcal/mol (5814.3844 without restraints) Performing minimization step: 139. Total energy = 5821.1106 kcal/mol (5805.6161 without restraints) Performing minimization step: 140. Total energy = 5812.3777 kcal/mol (5796.8899 without restraints) Performing minimization step: 141. Total energy = 5803.6860 kcal/mol (5788.2049 without restraints) Performing minimization step: 142. Total energy = 5795.0361 kcal/mol (5779.5617 without restraints) Performing minimization step: 143. Total energy = 5786.4278 kcal/mol (5770.9602 without restraints) Performing minimization step: 144. Total energy = 5777.8603 kcal/mol (5762.3992 without restraints) Performing minimization step: 145. Total energy = 5769.3342 kcal/mol (5753.8797 without restraints) Performing minimization step: 146. Total energy = 5760.8490 kcal/mol (5745.4014 without restraints) Performing minimization step: 147. Total energy = 5752.4042 kcal/mol (5736.9630 without restraints) Performing minimization step: 148. Total energy = 5744.0002 kcal/mol (5728.5656 without restraints) Performing minimization step: 149. Total energy = 5735.6372 kcal/mol (5720.2090 without restraints) Performing minimization step: 150. Total energy = 5727.3136 kcal/mol (5711.8920 without restraints) Performing minimization step: 151. Total energy = 5719.0303 kcal/mol (5703.6153 without restraints) Performing minimization step: 152. Total energy = 5710.7869 kcal/mol (5695.3785 without restraints) Performing minimization step: 153. Total energy = 5702.5832 kcal/mol (5687.1811 without restraints) Performing minimization step: 154. Total energy = 5694.4191 kcal/mol (5679.0236 without restraints) Performing minimization step: 155. Total energy = 5686.2943 kcal/mol (5670.9054 without restraints) Performing minimization step: 156. Total energy = 5678.2092 kcal/mol (5662.8268 without restraints) Performing minimization step: 157. Total energy = 5670.1632 kcal/mol (5654.7871 without restraints) Performing minimization step: 158. Total energy = 5662.1561 kcal/mol (5646.7864 without restraints) Performing minimization step: 159. Total energy = 5654.1880 kcal/mol (5638.8249 without restraints) Performing minimization step: 160. Total energy = 5646.2591 kcal/mol (5630.9024 without restraints) Performing minimization step: 161. Total energy = 5638.3682 kcal/mol (5623.0180 without restraints) Performing minimization step: 162. Total energy = 5630.5160 kcal/mol (5615.1722 without restraints) Performing minimization step: 163. Total energy = 5622.7021 kcal/mol (5607.3645 without restraints) Performing minimization step: 164. Total energy = 5614.9259 kcal/mol (5599.5948 without restraints) Performing minimization step: 165. Total energy = 5607.1877 kcal/mol (5591.8629 without restraints) Performing minimization step: 166. Total energy = 5599.4875 kcal/mol (5584.1691 without restraints) Performing minimization step: 167. Total energy = 5591.8248 kcal/mol (5576.5127 without restraints) Performing minimization step: 168. Total energy = 5584.1994 kcal/mol (5568.8936 without restraints) Performing minimization step: 169. Total energy = 5576.6118 kcal/mol (5561.3124 without restraints) Performing minimization step: 170. Total energy = 5569.0611 kcal/mol (5553.7679 without restraints) Performing minimization step: 171. Total energy = 5561.5474 kcal/mol (5546.2604 without restraints) Performing minimization step: 172. Total energy = 5554.0704 kcal/mol (5538.7895 without restraints) Performing minimization step: 173. Total energy = 5546.6305 kcal/mol (5531.3560 without restraints) Performing minimization step: 174. Total energy = 5539.2271 kcal/mol (5523.9588 without restraints) Performing minimization step: 175. Total energy = 5531.8593 kcal/mol (5516.5973 without restraints) Performing minimization step: 176. Total energy = 5524.5287 kcal/mol (5509.2728 without restraints) Performing minimization step: 177. Total energy = 5517.2336 kcal/mol (5501.9838 without restraints) Performing minimization step: 178. Total energy = 5509.9745 kcal/mol (5494.7310 without restraints) Performing minimization step: 179. Total energy = 5502.7516 kcal/mol (5487.5142 without restraints) Performing minimization step: 180. Total energy = 5495.5636 kcal/mol (5480.3322 without restraints) Performing minimization step: 181. Total energy = 5488.4107 kcal/mol (5473.1856 without restraints) Performing minimization step: 182. Total energy = 5481.2935 kcal/mol (5466.0745 without restraints) Performing minimization step: 183. Total energy = 5474.2115 kcal/mol (5458.9985 without restraints) Performing minimization step: 184. Total energy = 5467.1645 kcal/mol (5451.9577 without restraints) Performing minimization step: 185. Total energy = 5460.1521 kcal/mol (5444.9512 without restraints) Performing minimization step: 186. Total energy = 5453.1742 kcal/mol (5437.9793 without restraints) Performing minimization step: 187. Total energy = 5446.2308 kcal/mol (5431.0421 without restraints) Performing minimization step: 188. Total energy = 5439.3226 kcal/mol (5424.1399 without restraints) Performing minimization step: 189. Total energy = 5432.4476 kcal/mol (5417.2709 without restraints) Performing minimization step: 190. Total energy = 5425.6067 kcal/mol (5410.4358 without restraints) Performing minimization step: 191. Total energy = 5418.7997 kcal/mol (5403.6351 without restraints) Performing minimization step: 192. Total energy = 5412.0264 kcal/mol (5396.8677 without restraints) Performing minimization step: 193. Total energy = 5405.2860 kcal/mol (5390.1331 without restraints) Performing minimization step: 194. Total energy = 5398.5792 kcal/mol (5383.4323 without restraints) Performing minimization step: 195. Total energy = 5391.9056 kcal/mol (5376.7646 without restraints) Performing minimization step: 196. Total energy = 5385.2649 kcal/mol (5370.1297 without restraints) Performing minimization step: 197. Total energy = 5378.6569 kcal/mol (5363.5277 without restraints) Performing minimization step: 198. Total energy = 5372.0817 kcal/mol (5356.9584 without restraints) Performing minimization step: 199. Total energy = 5365.5391 kcal/mol (5350.4218 without restraints) Performing minimization step: 200. Total energy = 5359.0287 kcal/mol (5343.9170 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e0aaf9ce/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 201. Total energy = 5352.5503 kcal/mol (5337.4445 without restraints) Performing minimization step: 202. Total energy = 5346.1038 kcal/mol (5331.0038 without restraints) Performing minimization step: 203. Total energy = 5339.6890 kcal/mol (5324.5949 without restraints) Performing minimization step: 204. Total energy = 5333.3062 kcal/mol (5318.2178 without restraints) Performing minimization step: 205. Total energy = 5326.9545 kcal/mol (5311.8717 without restraints) Performing minimization step: 206. Total energy = 5320.6339 kcal/mol (5305.5570 without restraints) Performing minimization step: 207. Total energy = 5314.3445 kcal/mol (5299.2734 without restraints) Performing minimization step: 208. Total energy = 5308.0866 kcal/mol (5293.0211 without restraints) Performing minimization step: 209. Total energy = 5301.8595 kcal/mol (5286.7998 without restraints) Performing minimization step: 210. Total energy = 5295.6632 kcal/mol (5280.6092 without restraints) Performing minimization step: 211. Total energy = 5289.4975 kcal/mol (5274.4492 without restraints) Performing minimization step: 212. Total energy = 5283.3613 kcal/mol (5268.3187 without restraints) Performing minimization step: 213. Total energy = 5277.2562 kcal/mol (5262.2193 without restraints) Performing minimization step: 214. Total energy = 5271.1812 kcal/mol (5256.1498 without restraints) Performing minimization step: 215. Total energy = 5265.1361 kcal/mol (5250.1103 without restraints) Performing minimization step: 216. Total energy = 5259.1202 kcal/mol (5244.1000 without restraints) Performing minimization step: 217. Total energy = 5253.1338 kcal/mol (5238.1193 without restraints) Performing minimization step: 218. Total energy = 5247.1775 kcal/mol (5232.1685 without restraints) Performing minimization step: 219. Total energy = 5241.2499 kcal/mol (5226.2465 without restraints) Performing minimization step: 220. Total energy = 5235.3514 kcal/mol (5220.3536 without restraints) Performing minimization step: 221. Total energy = 5229.4821 kcal/mol (5214.4898 without restraints) Performing minimization step: 222. Total energy = 5223.6417 kcal/mol (5208.6549 without restraints) Performing minimization step: 223. Total energy = 5217.8297 kcal/mol (5202.8484 without restraints) Performing minimization step: 224. Total energy = 5212.0458 kcal/mol (5197.0700 without restraints) Performing minimization step: 225. Total energy = 5206.2901 kcal/mol (5191.3197 without restraints) Performing minimization step: 226. Total energy = 5200.5628 kcal/mol (5185.5981 without restraints) Performing minimization step: 227. Total energy = 5194.8632 kcal/mol (5179.9039 without restraints) Performing minimization step: 228. Total energy = 5189.1918 kcal/mol (5174.2379 without restraints) Performing minimization step: 229. Total energy = 5183.5477 kcal/mol (5168.5992 without restraints) Performing minimization step: 230. Total energy = 5177.9313 kcal/mol (5162.9881 without restraints) Performing minimization step: 231. Total energy = 5172.3419 kcal/mol (5157.4042 without restraints) Performing minimization step: 232. Total energy = 5166.7793 kcal/mol (5151.8470 without restraints) Performing minimization step: 233. Total energy = 5161.2446 kcal/mol (5146.3177 without restraints) Performing minimization step: 234. Total energy = 5155.7361 kcal/mol (5140.8146 without restraints) Performing minimization step: 235. Total energy = 5150.2549 kcal/mol (5135.3387 without restraints) Performing minimization step: 236. Total energy = 5144.7996 kcal/mol (5129.8888 without restraints) Performing minimization step: 237. Total energy = 5139.3714 kcal/mol (5124.4659 without restraints) Performing minimization step: 238. Total energy = 5133.9692 kcal/mol (5119.0690 without restraints) Performing minimization step: 239. Total energy = 5128.5924 kcal/mol (5113.6975 without restraints) Performing minimization step: 240. Total energy = 5123.2425 kcal/mol (5108.3529 without restraints) Performing minimization step: 241. Total energy = 5117.9179 kcal/mol (5103.0336 without restraints) Performing minimization step: 242. Total energy = 5112.6188 kcal/mol (5097.7397 without restraints) Performing minimization step: 243. Total energy = 5107.3451 kcal/mol (5092.4713 without restraints) Performing minimization step: 244. Total energy = 5102.0966 kcal/mol (5087.2281 without restraints) Performing minimization step: 245. Total energy = 5096.8734 kcal/mol (5082.0101 without restraints) Performing minimization step: 246. Total energy = 5091.6754 kcal/mol (5076.8173 without restraints) Performing minimization step: 247. Total energy = 5086.5023 kcal/mol (5071.6493 without restraints) Performing minimization step: 248. Total energy = 5081.3537 kcal/mol (5066.5060 without restraints) Performing minimization step: 249. Total energy = 5076.2298 kcal/mol (5061.3873 without restraints) Performing minimization step: 250. Total energy = 5071.1303 kcal/mol (5056.2928 without restraints) Performing minimization step: 251. Total energy = 5066.0547 kcal/mol (5051.2223 without restraints) Performing minimization step: 252. Total energy = 5061.0040 kcal/mol (5046.1770 without restraints) Performing minimization step: 253. Total energy = 5055.9768 kcal/mol (5041.1548 without restraints) Performing minimization step: 254. Total energy = 5050.9737 kcal/mol (5036.1568 without restraints) Performing minimization step: 255. Total energy = 5045.9942 kcal/mol (5031.1823 without restraints) Performing minimization step: 256. Total energy = 5041.0381 kcal/mol (5026.2312 without restraints) Performing minimization step: 257. Total energy = 5036.1060 kcal/mol (5021.3044 without restraints) Performing minimization step: 258. Total energy = 5031.1967 kcal/mol (5016.4002 without restraints) Performing minimization step: 259. Total energy = 5026.3106 kcal/mol (5011.5190 without restraints) Performing minimization step: 260. Total energy = 5021.4473 kcal/mol (5006.6608 without restraints) Performing minimization step: 261. Total energy = 5016.6067 kcal/mol (5001.8252 without restraints) Performing minimization step: 262. Total energy = 5011.7884 kcal/mol (4997.0118 without restraints) Performing minimization step: 263. Total energy = 5006.9928 kcal/mol (4992.2213 without restraints) Performing minimization step: 264. Total energy = 5002.2196 kcal/mol (4987.4531 without restraints) Performing minimization step: 265. Total energy = 4997.4689 kcal/mol (4982.7074 without restraints) Performing minimization step: 266. Total energy = 4992.7403 kcal/mol (4977.9838 without restraints) Performing minimization step: 267. Total energy = 4988.0337 kcal/mol (4973.2823 without restraints) Performing minimization step: 268. Total energy = 4983.3489 kcal/mol (4968.6023 without restraints) Performing minimization step: 269. Total energy = 4978.6858 kcal/mol (4963.9441 without restraints) Performing minimization step: 270. Total energy = 4974.0447 kcal/mol (4959.3081 without restraints) Performing minimization step: 271. Total energy = 4969.4246 kcal/mol (4954.6928 without restraints) Performing minimization step: 272. Total energy = 4964.8259 kcal/mol (4950.0988 without restraints) Performing minimization step: 273. Total energy = 4960.2481 kcal/mol (4945.5261 without restraints) Performing minimization step: 274. Total energy = 4955.6909 kcal/mol (4940.9738 without restraints) Performing minimization step: 275. Total energy = 4951.1556 kcal/mol (4936.4433 without restraints) Performing minimization step: 276. Total energy = 4946.6407 kcal/mol (4931.9334 without restraints) Performing minimization step: 277. Total energy = 4942.1461 kcal/mol (4927.4435 without restraints) Performing minimization step: 278. Total energy = 4937.6719 kcal/mol (4922.9741 without restraints) Performing minimization step: 279. Total energy = 4933.2184 kcal/mol (4918.5255 without restraints) Performing minimization step: 280. Total energy = 4928.7850 kcal/mol (4914.0968 without restraints) Performing minimization step: 281. Total energy = 4924.3714 kcal/mol (4909.6881 without restraints) Performing minimization step: 282. Total energy = 4919.9779 kcal/mol (4905.2993 without restraints) Performing minimization step: 283. Total energy = 4915.6045 kcal/mol (4900.9308 without restraints) Performing minimization step: 284. Total energy = 4911.2505 kcal/mol (4896.5816 without restraints) Performing minimization step: 285. Total energy = 4906.9161 kcal/mol (4892.2519 without restraints) Performing minimization step: 286. Total energy = 4902.6010 kcal/mol (4887.9414 without restraints) Performing minimization step: 287. Total energy = 4898.3051 kcal/mol (4883.6503 without restraints) Performing minimization step: 288. Total energy = 4894.0284 kcal/mol (4879.3784 without restraints) Performing minimization step: 289. Total energy = 4889.7710 kcal/mol (4875.1257 without restraints) Performing minimization step: 290. Total energy = 4885.5324 kcal/mol (4870.8920 without restraints) Performing minimization step: 291. Total energy = 4881.3127 kcal/mol (4866.6769 without restraints) Performing minimization step: 292. Total energy = 4877.1118 kcal/mol (4862.4808 without restraints) Performing minimization step: 293. Total energy = 4872.9294 kcal/mol (4858.3030 without restraints) Performing minimization step: 294. Total energy = 4868.7656 kcal/mol (4854.1439 without restraints) Performing minimization step: 295. Total energy = 4864.6201 kcal/mol (4850.0031 without restraints) Performing minimization step: 296. Total energy = 4860.4928 kcal/mol (4845.8804 without restraints) Performing minimization step: 297. Total energy = 4856.3837 kcal/mol (4841.7760 without restraints) Performing minimization step: 298. Total energy = 4852.2925 kcal/mol (4837.6894 without restraints) Performing minimization step: 299. Total energy = 4848.2188 kcal/mol (4833.6204 without restraints) Performing minimization step: 300. Total energy = 4844.1633 kcal/mol (4829.5695 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e0aaf9ce/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 301. Total energy = 4840.1256 kcal/mol (4825.5364 without restraints) Performing minimization step: 302. Total energy = 4836.1052 kcal/mol (4821.5207 without restraints) Performing minimization step: 303. Total energy = 4832.1021 kcal/mol (4817.5221 without restraints) Performing minimization step: 304. Total energy = 4828.1165 kcal/mol (4813.5411 without restraints) Performing minimization step: 305. Total energy = 4824.1478 kcal/mol (4809.5770 without restraints) Performing minimization step: 306. Total energy = 4820.1965 kcal/mol (4805.6304 without restraints) Performing minimization step: 307. Total energy = 4816.2619 kcal/mol (4801.7002 without restraints) Performing minimization step: 308. Total energy = 4812.3437 kcal/mol (4797.7867 without restraints) Performing minimization step: 309. Total energy = 4808.4428 kcal/mol (4793.8904 without restraints) Performing minimization step: 310. Total energy = 4804.5580 kcal/mol (4790.0100 without restraints) Performing minimization step: 311. Total energy = 4800.6906 kcal/mol (4786.1472 without restraints) Performing minimization step: 312. Total energy = 4796.8393 kcal/mol (4782.3005 without restraints) Performing minimization step: 313. Total energy = 4793.0041 kcal/mol (4778.4698 without restraints) Performing minimization step: 314. Total energy = 4789.1855 kcal/mol (4774.6557 without restraints) Performing minimization step: 315. Total energy = 4785.3829 kcal/mol (4770.8577 without restraints) Performing minimization step: 316. Total energy = 4781.5963 kcal/mol (4767.0755 without restraints) Performing minimization step: 317. Total energy = 4777.8249 kcal/mol (4763.3086 without restraints) Performing minimization step: 318. Total energy = 4774.0695 kcal/mol (4759.5577 without restraints) Performing minimization step: 319. Total energy = 4770.3304 kcal/mol (4755.8231 without restraints) Performing minimization step: 320. Total energy = 4766.6066 kcal/mol (4752.1037 without restraints) Performing minimization step: 321. Total energy = 4762.8982 kcal/mol (4748.3998 without restraints) Performing minimization step: 322. Total energy = 4759.2056 kcal/mol (4744.7117 without restraints) Performing minimization step: 323. Total energy = 4755.5283 kcal/mol (4741.0389 without restraints) Performing minimization step: 324. Total energy = 4751.8660 kcal/mol (4737.3811 without restraints) Performing minimization step: 325. Total energy = 4748.2189 kcal/mol (4733.7384 without restraints) Performing minimization step: 326. Total energy = 4744.5868 kcal/mol (4730.1107 without restraints) Performing minimization step: 327. Total energy = 4740.9695 kcal/mol (4726.4978 without restraints) Performing minimization step: 328. Total energy = 4737.3668 kcal/mol (4722.8996 without restraints) Performing minimization step: 329. Total energy = 4733.7790 kcal/mol (4719.3162 without restraints) Performing minimization step: 330. Total energy = 4730.2060 kcal/mol (4715.7477 without restraints) Performing minimization step: 331. Total energy = 4726.6475 kcal/mol (4712.1935 without restraints) Performing minimization step: 332. Total energy = 4723.1038 kcal/mol (4708.6542 without restraints) Performing minimization step: 333. Total energy = 4719.5739 kcal/mol (4705.1288 without restraints) Performing minimization step: 334. Total energy = 4716.0586 kcal/mol (4701.6178 without restraints) Performing minimization step: 335. Total energy = 4712.5578 kcal/mol (4698.1214 without restraints) Performing minimization step: 336. Total energy = 4709.0710 kcal/mol (4694.6389 without restraints) Performing minimization step: 337. Total energy = 4705.5977 kcal/mol (4691.1700 without restraints) Performing minimization step: 338. Total energy = 4702.1387 kcal/mol (4687.7155 without restraints) Performing minimization step: 339. Total energy = 4698.6931 kcal/mol (4684.2740 without restraints) Performing minimization step: 340. Total energy = 4695.2610 kcal/mol (4680.8465 without restraints) Performing minimization step: 341. Total energy = 4691.8431 kcal/mol (4677.4329 without restraints) Performing minimization step: 342. Total energy = 4688.4393 kcal/mol (4674.0336 without restraints) Performing minimization step: 343. Total energy = 4685.0489 kcal/mol (4670.6476 without restraints) Performing minimization step: 344. Total energy = 4681.6722 kcal/mol (4667.2751 without restraints) Performing minimization step: 345. Total energy = 4678.3084 kcal/mol (4663.9155 without restraints) Performing minimization step: 346. Total energy = 4674.9576 kcal/mol (4660.5693 without restraints) Performing minimization step: 347. Total energy = 4671.6207 kcal/mol (4657.2367 without restraints) Performing minimization step: 348. Total energy = 4668.2969 kcal/mol (4653.9172 without restraints) Performing minimization step: 349. Total energy = 4664.9859 kcal/mol (4650.6104 without restraints) Performing minimization step: 350. Total energy = 4661.6879 kcal/mol (4647.3169 without restraints) Performing minimization step: 351. Total energy = 4658.4030 kcal/mol (4644.0361 without restraints) Performing minimization step: 352. Total energy = 4655.1308 kcal/mol (4640.7684 without restraints) Performing minimization step: 353. Total energy = 4651.8720 kcal/mol (4637.5138 without restraints) Performing minimization step: 354. Total energy = 4648.6250 kcal/mol (4634.2712 without restraints) Performing minimization step: 355. Total energy = 4645.3910 kcal/mol (4631.0414 without restraints) Performing minimization step: 356. Total energy = 4642.1693 kcal/mol (4627.8241 without restraints) Performing minimization step: 357. Total energy = 4638.9602 kcal/mol (4624.6193 without restraints) Performing minimization step: 358. Total energy = 4635.7636 kcal/mol (4621.4270 without restraints) Performing minimization step: 359. Total energy = 4632.5793 kcal/mol (4618.2470 without restraints) Performing minimization step: 360. Total energy = 4629.4068 kcal/mol (4615.0788 without restraints) Performing minimization step: 361. Total energy = 4626.2470 kcal/mol (4611.9232 without restraints) Performing minimization step: 362. Total energy = 4623.0999 kcal/mol (4608.7806 without restraints) Performing minimization step: 363. Total energy = 4619.9644 kcal/mol (4605.6491 without restraints) Performing minimization step: 364. Total energy = 4616.8408 kcal/mol (4602.5299 without restraints) Performing minimization step: 365. Total energy = 4613.7301 kcal/mol (4599.4235 without restraints) Performing minimization step: 366. Total energy = 4610.6306 kcal/mol (4596.3282 without restraints) Performing minimization step: 367. Total energy = 4607.5427 kcal/mol (4593.2445 without restraints) Performing minimization step: 368. Total energy = 4604.4666 kcal/mol (4590.1728 without restraints) Performing minimization step: 369. Total energy = 4601.4023 kcal/mol (4587.1128 without restraints) Performing minimization step: 370. Total energy = 4598.3497 kcal/mol (4584.0644 without restraints) Performing minimization step: 371. Total energy = 4595.3086 kcal/mol (4581.0277 without restraints) Performing minimization step: 372. Total energy = 4592.2790 kcal/mol (4578.0021 without restraints) Performing minimization step: 373. Total energy = 4589.2605 kcal/mol (4574.9878 without restraints) Performing minimization step: 374. Total energy = 4586.2534 kcal/mol (4571.9851 without restraints) Performing minimization step: 375. Total energy = 4583.2577 kcal/mol (4568.9937 without restraints) Performing minimization step: 376. Total energy = 4580.2735 kcal/mol (4566.0138 without restraints) Performing minimization step: 377. Total energy = 4577.3006 kcal/mol (4563.0452 without restraints) Performing minimization step: 378. Total energy = 4574.3390 kcal/mol (4560.0877 without restraints) Performing minimization step: 379. Total energy = 4571.3885 kcal/mol (4557.1416 without restraints) Performing minimization step: 380. Total energy = 4568.4495 kcal/mol (4554.2069 without restraints) Performing minimization step: 381. Total energy = 4565.5213 kcal/mol (4551.2828 without restraints) Performing minimization step: 382. Total energy = 4562.6041 kcal/mol (4548.3699 without restraints) Performing minimization step: 383. Total energy = 4559.6979 kcal/mol (4545.4679 without restraints) Performing minimization step: 384. Total energy = 4556.8026 kcal/mol (4542.5769 without restraints) Performing minimization step: 385. Total energy = 4553.9171 kcal/mol (4539.6957 without restraints) Performing minimization step: 386. Total energy = 4551.0433 kcal/mol (4536.8261 without restraints) Performing minimization step: 387. Total energy = 4548.1801 kcal/mol (4533.9672 without restraints) Performing minimization step: 388. Total energy = 4545.3275 kcal/mol (4531.1187 without restraints) Performing minimization step: 389. Total energy = 4542.4854 kcal/mol (4528.2809 without restraints) Performing minimization step: 390. Total energy = 4539.6539 kcal/mol (4525.4537 without restraints) Performing minimization step: 391. Total energy = 4536.8325 kcal/mol (4522.6365 without restraints) Performing minimization step: 392. Total energy = 4534.0220 kcal/mol (4519.8303 without restraints) Performing minimization step: 393. Total energy = 4531.2214 kcal/mol (4517.0337 without restraints) Performing minimization step: 394. Total energy = 4528.4316 kcal/mol (4514.2483 without restraints) Performing minimization step: 395. Total energy = 4525.6521 kcal/mol (4511.4733 without restraints) Performing minimization step: 396. Total energy = 4522.8833 kcal/mol (4508.7085 without restraints) Performing minimization step: 397. Total energy = 4520.1244 kcal/mol (4505.9540 without restraints) Performing minimization step: 398. Total energy = 4517.3760 kcal/mol (4503.2096 without restraints) Performing minimization step: 399. Total energy = 4514.6374 kcal/mol (4500.4753 without restraints) Performing minimization step: 400. Total energy = 4511.9089 kcal/mol (4497.7511 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e0aaf9ce/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 401. Total energy = 4509.1906 kcal/mol (4495.0371 without restraints) Performing minimization step: 402. Total energy = 4506.4817 kcal/mol (4492.3323 without restraints) Performing minimization step: 403. Total energy = 4503.7831 kcal/mol (4489.6378 without restraints) Performing minimization step: 404. Total energy = 4501.0942 kcal/mol (4486.9533 without restraints) Performing minimization step: 405. Total energy = 4498.4152 kcal/mol (4484.2786 without restraints) Performing minimization step: 406. Total energy = 4495.7462 kcal/mol (4481.6138 without restraints) Performing minimization step: 407. Total energy = 4493.0869 kcal/mol (4478.9587 without restraints) Performing minimization step: 408. Total energy = 4490.4371 kcal/mol (4476.3133 without restraints) Performing minimization step: 409. Total energy = 4487.7971 kcal/mol (4473.6774 without restraints) Performing minimization step: 410. Total energy = 4485.1671 kcal/mol (4471.0518 without restraints) Performing minimization step: 411. Total energy = 4482.5462 kcal/mol (4468.4349 without restraints) Performing minimization step: 412. Total energy = 4479.9352 kcal/mol (4465.8282 without restraints) Performing minimization step: 413. Total energy = 4477.3337 kcal/mol (4463.2310 without restraints) Performing minimization step: 414. Total energy = 4474.7418 kcal/mol (4460.6433 without restraints) Performing minimization step: 415. Total energy = 4472.1595 kcal/mol (4458.0653 without restraints) Performing minimization step: 416. Total energy = 4469.5861 kcal/mol (4455.4962 without restraints) Performing minimization step: 417. Total energy = 4467.0223 kcal/mol (4452.9366 without restraints) Performing minimization step: 418. Total energy = 4464.4680 kcal/mol (4450.3865 without restraints) Performing minimization step: 419. Total energy = 4461.9228 kcal/mol (4447.8456 without restraints) Performing minimization step: 420. Total energy = 4459.3867 kcal/mol (4445.3138 without restraints) Performing minimization step: 421. Total energy = 4456.8600 kcal/mol (4442.7913 without restraints) Performing minimization step: 422. Total energy = 4454.3427 kcal/mol (4440.2782 without restraints) Performing minimization step: 423. Total energy = 4451.8342 kcal/mol (4437.7739 without restraints) Performing minimization step: 424. Total energy = 4449.3353 kcal/mol (4435.2793 without restraints) Performing minimization step: 425. Total energy = 4446.8451 kcal/mol (4432.7934 without restraints) Performing minimization step: 426. Total energy = 4444.3634 kcal/mol (4430.3159 without restraints) Performing minimization step: 427. Total energy = 4441.8904 kcal/mol (4427.8471 without restraints) Performing minimization step: 428. Total energy = 4439.4270 kcal/mol (4425.3880 without restraints) Performing minimization step: 429. Total energy = 4436.9726 kcal/mol (4422.9379 without restraints) Performing minimization step: 430. Total energy = 4434.5270 kcal/mol (4420.4967 without restraints) Performing minimization step: 431. Total energy = 4432.0900 kcal/mol (4418.0639 without restraints) Performing minimization step: 432. Total energy = 4429.6619 kcal/mol (4415.6400 without restraints) Performing minimization step: 433. Total energy = 4427.2425 kcal/mol (4413.2249 without restraints) Performing minimization step: 434. Total energy = 4424.8316 kcal/mol (4410.8182 without restraints) Performing minimization step: 435. Total energy = 4422.4302 kcal/mol (4408.4210 without restraints) Performing minimization step: 436. Total energy = 4420.0373 kcal/mol (4406.0324 without restraints) Performing minimization step: 437. Total energy = 4417.6525 kcal/mol (4403.6519 without restraints) Performing minimization step: 438. Total energy = 4415.2765 kcal/mol (4401.2802 without restraints) Performing minimization step: 439. Total energy = 4412.9091 kcal/mol (4398.9171 without restraints) Performing minimization step: 440. Total energy = 4410.5500 kcal/mol (4396.5622 without restraints) Performing minimization step: 441. Total energy = 4408.1994 kcal/mol (4394.2159 without restraints) Performing minimization step: 442. Total energy = 4405.8574 kcal/mol (4391.8782 without restraints) Performing minimization step: 443. Total energy = 4403.5239 kcal/mol (4389.5489 without restraints) Performing minimization step: 444. Total energy = 4401.1989 kcal/mol (4387.2282 without restraints) Performing minimization step: 445. Total energy = 4398.8819 kcal/mol (4384.9155 without restraints) Performing minimization step: 446. Total energy = 4396.5736 kcal/mol (4382.6115 without restraints) Performing minimization step: 447. Total energy = 4394.2732 kcal/mol (4380.3154 without restraints) Performing minimization step: 448. Total energy = 4391.9810 kcal/mol (4378.0275 without restraints) Performing minimization step: 449. Total energy = 4389.6971 kcal/mol (4375.7478 without restraints) Performing minimization step: 450. Total energy = 4387.4213 kcal/mol (4373.4765 without restraints) Performing minimization step: 451. Total energy = 4385.1542 kcal/mol (4371.2136 without restraints) Performing minimization step: 452. Total energy = 4382.8948 kcal/mol (4368.9585 without restraints) Performing minimization step: 453. Total energy = 4380.6434 kcal/mol (4366.7114 without restraints) Performing minimization step: 454. Total energy = 4378.3995 kcal/mol (4364.4718 without restraints) Performing minimization step: 455. Total energy = 4376.1647 kcal/mol (4362.2414 without restraints) Performing minimization step: 456. Total energy = 4373.9377 kcal/mol (4360.0187 without restraints) Performing minimization step: 457. Total energy = 4371.7186 kcal/mol (4357.8038 without restraints) Performing minimization step: 458. Total energy = 4369.5072 kcal/mol (4355.5966 without restraints) Performing minimization step: 459. Total energy = 4367.3036 kcal/mol (4353.3975 without restraints) Performing minimization step: 460. Total energy = 4365.1079 kcal/mol (4351.2061 without restraints) Performing minimization step: 461. Total energy = 4362.9205 kcal/mol (4349.0230 without restraints) Performing minimization step: 462. Total energy = 4360.7407 kcal/mol (4346.8473 without restraints) Performing minimization step: 463. Total energy = 4358.5688 kcal/mol (4344.6800 without restraints) Performing minimization step: 464. Total energy = 4356.4049 kcal/mol (4342.5205 without restraints) Performing minimization step: 465. Total energy = 4354.2486 kcal/mol (4340.3683 without restraints) Performing minimization step: 466. Total energy = 4352.0998 kcal/mol (4338.2238 without restraints) Performing minimization step: 467. Total energy = 4349.9585 kcal/mol (4336.0869 without restraints) Performing minimization step: 468. Total energy = 4347.8253 kcal/mol (4333.9582 without restraints) Performing minimization step: 469. Total energy = 4345.6993 kcal/mol (4331.8362 without restraints) Performing minimization step: 470. Total energy = 4343.5811 kcal/mol (4329.7224 without restraints) Performing minimization step: 471. Total energy = 4341.4705 kcal/mol (4327.6162 without restraints) Performing minimization step: 472. Total energy = 4339.3671 kcal/mol (4325.5172 without restraints) Performing minimization step: 473. Total energy = 4337.2712 kcal/mol (4323.4256 without restraints) Performing minimization step: 474. Total energy = 4335.1831 kcal/mol (4321.3418 without restraints) Performing minimization step: 475. Total energy = 4333.1020 kcal/mol (4319.2651 without restraints) Performing minimization step: 476. Total energy = 4331.0282 kcal/mol (4317.1957 without restraints) Performing minimization step: 477. Total energy = 4328.9620 kcal/mol (4315.1339 without restraints) Performing minimization step: 478. Total energy = 4326.9039 kcal/mol (4313.0801 without restraints) Performing minimization step: 479. Total energy = 4324.8525 kcal/mol (4311.0330 without restraints) Performing minimization step: 480. Total energy = 4322.8085 kcal/mol (4308.9935 without restraints) Performing minimization step: 481. Total energy = 4320.7717 kcal/mol (4306.9610 without restraints) Performing minimization step: 482. Total energy = 4318.7423 kcal/mol (4304.9360 without restraints) Performing minimization step: 483. Total energy = 4316.7198 kcal/mol (4302.9178 without restraints) Performing minimization step: 484. Total energy = 4314.7043 kcal/mol (4300.9067 without restraints) Performing minimization step: 485. Total energy = 4312.6963 kcal/mol (4298.9031 without restraints) Performing minimization step: 486. Total energy = 4310.6947 kcal/mol (4296.9059 without restraints) Performing minimization step: 487. Total energy = 4308.7003 kcal/mol (4294.9157 without restraints) Performing minimization step: 488. Total energy = 4306.7134 kcal/mol (4292.9335 without restraints) Performing minimization step: 489. Total energy = 4304.7335 kcal/mol (4290.9578 without restraints) Performing minimization step: 490. Total energy = 4302.7606 kcal/mol (4288.9891 without restraints) Performing minimization step: 491. Total energy = 4300.7945 kcal/mol (4287.0276 without restraints) Performing minimization step: 492. Total energy = 4298.8357 kcal/mol (4285.0733 without restraints) Performing minimization step: 493. Total energy = 4296.8840 kcal/mol (4283.1257 without restraints) Performing minimization step: 494. Total energy = 4294.9388 kcal/mol (4281.1851 without restraints) Performing minimization step: 495. Total energy = 4293.0009 kcal/mol (4279.2517 without restraints) Performing minimization step: 496. Total energy = 4291.0700 kcal/mol (4277.3252 without restraints) Performing minimization step: 497. Total energy = 4289.1455 kcal/mol (4275.4050 without restraints) Performing minimization step: 498. Total energy = 4287.2277 kcal/mol (4273.4916 without restraints) Performing minimization step: 499. Total energy = 4285.3168 kcal/mol (4271.5851 without restraints) Performing minimization step: 500. Total energy = 4283.4126 kcal/mol (4269.6853 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e0aaf9ce/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 501. Total energy = 4281.5150 kcal/mol (4267.7921 without restraints) Performing minimization step: 502. Total energy = 4279.6239 kcal/mol (4265.9055 without restraints) Performing minimization step: 503. Total energy = 4277.7399 kcal/mol (4264.0259 without restraints) Performing minimization step: 504. Total energy = 4275.8630 kcal/mol (4262.1532 without restraints) Performing minimization step: 505. Total energy = 4273.9920 kcal/mol (4260.2869 without restraints) Performing minimization step: 506. Total energy = 4272.1278 kcal/mol (4258.4271 without restraints) Performing minimization step: 507. Total energy = 4270.2704 kcal/mol (4256.5743 without restraints) Performing minimization step: 508. Total energy = 4268.4191 kcal/mol (4254.7272 without restraints) Performing minimization step: 509. Total energy = 4266.5741 kcal/mol (4252.8868 without restraints) Performing minimization step: 510. Total energy = 4264.7360 kcal/mol (4251.0532 without restraints) Performing minimization step: 511. Total energy = 4262.9047 kcal/mol (4249.2262 without restraints) Performing minimization step: 512. Total energy = 4261.0795 kcal/mol (4247.4055 without restraints) Performing minimization step: 513. Total energy = 4259.2605 kcal/mol (4245.5909 without restraints) Performing minimization step: 514. Total energy = 4257.4485 kcal/mol (4243.7834 without restraints) Performing minimization step: 515. Total energy = 4255.6423 kcal/mol (4241.9816 without restraints) Performing minimization step: 516. Total energy = 4253.8422 kcal/mol (4240.1860 without restraints) Performing minimization step: 517. Total energy = 4252.0486 kcal/mol (4238.3969 without restraints) Performing minimization step: 518. Total energy = 4250.2612 kcal/mol (4236.6139 without restraints) Performing minimization step: 519. Total energy = 4248.4802 kcal/mol (4234.8375 without restraints) Performing minimization step: 520. Total energy = 4246.7060 kcal/mol (4233.0676 without restraints) Performing minimization step: 521. Total energy = 4244.9373 kcal/mol (4231.3035 without restraints) Performing minimization step: 522. Total energy = 4243.1747 kcal/mol (4229.5454 without restraints) Performing minimization step: 523. Total energy = 4241.4184 kcal/mol (4227.7936 without restraints) Performing minimization step: 524. Total energy = 4239.6689 kcal/mol (4226.0487 without restraints) Performing minimization step: 525. Total energy = 4237.9247 kcal/mol (4224.3088 without restraints) Performing minimization step: 526. Total energy = 4236.1867 kcal/mol (4222.5754 without restraints) Performing minimization step: 527. Total energy = 4234.4547 kcal/mol (4220.8479 without restraints) Performing minimization step: 528. Total energy = 4232.7287 kcal/mol (4219.1263 without restraints) Performing minimization step: 529. Total energy = 4231.0089 kcal/mol (4217.4112 without restraints) Performing minimization step: 530. Total energy = 4229.2951 kcal/mol (4215.7017 without restraints) Performing minimization step: 531. Total energy = 4227.5871 kcal/mol (4213.9982 without restraints) Performing minimization step: 532. Total energy = 4225.8850 kcal/mol (4212.3007 without restraints) Performing minimization step: 533. Total energy = 4224.1893 kcal/mol (4210.6095 without restraints) Performing minimization step: 534. Total energy = 4222.4988 kcal/mol (4208.9235 without restraints) Performing minimization step: 535. Total energy = 4220.8146 kcal/mol (4207.2438 without restraints) Performing minimization step: 536. Total energy = 4219.1359 kcal/mol (4205.5695 without restraints) Performing minimization step: 537. Total energy = 4217.4631 kcal/mol (4203.9014 without restraints) Performing minimization step: 538. Total energy = 4215.7959 kcal/mol (4202.2386 without restraints) Performing minimization step: 539. Total energy = 4214.1346 kcal/mol (4200.5818 without restraints) Performing minimization step: 540. Total energy = 4212.4790 kcal/mol (4198.9309 without restraints) Performing minimization step: 541. Total energy = 4210.8294 kcal/mol (4197.2858 without restraints) Performing minimization step: 542. Total energy = 4209.1851 kcal/mol (4195.6461 without restraints) Performing minimization step: 543. Total energy = 4207.5472 kcal/mol (4194.0129 without restraints) Performing minimization step: 544. Total energy = 4205.9151 kcal/mol (4192.3852 without restraints) Performing minimization step: 545. Total energy = 4204.2883 kcal/mol (4190.7629 without restraints) Performing minimization step: 546. Total energy = 4202.6670 kcal/mol (4189.1462 without restraints) Performing minimization step: 547. Total energy = 4201.0512 kcal/mol (4187.5350 without restraints) Performing minimization step: 548. Total energy = 4199.4412 kcal/mol (4185.9296 without restraints) Performing minimization step: 549. Total energy = 4197.8363 kcal/mol (4184.3290 without restraints) Performing minimization step: 550. Total energy = 4196.2369 kcal/mol (4182.7343 without restraints) Performing minimization step: 551. Total energy = 4194.6434 kcal/mol (4181.1456 without restraints) Performing minimization step: 552. Total energy = 4193.0556 kcal/mol (4179.5624 without restraints) Performing minimization step: 553. Total energy = 4191.4729 kcal/mol (4177.9841 without restraints) Performing minimization step: 554. Total energy = 4189.8957 kcal/mol (4176.4115 without restraints) Performing minimization step: 555. Total energy = 4188.3243 kcal/mol (4174.8448 without restraints) Performing minimization step: 556. Total energy = 4186.7575 kcal/mol (4173.2825 without restraints) Performing minimization step: 557. Total energy = 4185.1965 kcal/mol (4171.7258 without restraints) Performing minimization step: 558. Total energy = 4183.6414 kcal/mol (4170.1754 without restraints) Performing minimization step: 559. Total energy = 4182.0913 kcal/mol (4168.6300 without restraints) Performing minimization step: 560. Total energy = 4180.5459 kcal/mol (4167.0893 without restraints) Performing minimization step: 561. Total energy = 4179.0066 kcal/mol (4165.5547 without restraints) Performing minimization step: 562. Total energy = 4177.4725 kcal/mol (4164.0251 without restraints) Performing minimization step: 563. Total energy = 4175.9437 kcal/mol (4162.5011 without restraints) Performing minimization step: 564. Total energy = 4174.4198 kcal/mol (4160.9817 without restraints) Performing minimization step: 565. Total energy = 4172.9009 kcal/mol (4159.4673 without restraints) Performing minimization step: 566. Total energy = 4171.3875 kcal/mol (4157.9585 without restraints) Performing minimization step: 567. Total energy = 4169.8792 kcal/mol (4156.4549 without restraints) Performing minimization step: 568. Total energy = 4168.3761 kcal/mol (4154.9564 without restraints) Performing minimization step: 569. Total energy = 4166.8784 kcal/mol (4153.4633 without restraints) Performing minimization step: 570. Total energy = 4165.3855 kcal/mol (4151.9752 without restraints) Performing minimization step: 571. Total energy = 4163.8979 kcal/mol (4150.4923 without restraints) Performing minimization step: 572. Total energy = 4162.4153 kcal/mol (4149.0142 without restraints) Performing minimization step: 573. Total energy = 4160.9379 kcal/mol (4147.5414 without restraints) Performing minimization step: 574. Total energy = 4159.4648 kcal/mol (4146.0729 without restraints) Performing minimization step: 575. Total energy = 4157.9977 kcal/mol (4144.6106 without restraints) Performing minimization step: 576. Total energy = 4156.5351 kcal/mol (4143.1527 without restraints) Performing minimization step: 577. Total energy = 4155.0772 kcal/mol (4141.6993 without restraints) Performing minimization step: 578. Total energy = 4153.6245 kcal/mol (4140.2513 without restraints) Performing minimization step: 579. Total energy = 4152.1766 kcal/mol (4138.8081 without restraints) Performing minimization step: 580. Total energy = 4150.7335 kcal/mol (4137.3698 without restraints) Performing minimization step: 581. Total energy = 4149.2953 kcal/mol (4135.9361 without restraints) Performing minimization step: 582. Total energy = 4147.8622 kcal/mol (4134.5076 without restraints) Performing minimization step: 583. Total energy = 4146.4346 kcal/mol (4133.0848 without restraints) Performing minimization step: 584. Total energy = 4145.0109 kcal/mol (4131.6658 without restraints) Performing minimization step: 585. Total energy = 4143.5923 kcal/mol (4130.2518 without restraints) Performing minimization step: 586. Total energy = 4142.1779 kcal/mol (4128.8421 without restraints) Performing minimization step: 587. Total energy = 4140.7690 kcal/mol (4127.4378 without restraints) Performing minimization step: 588. Total energy = 4139.3644 kcal/mol (4126.0380 without restraints) Performing minimization step: 589. Total energy = 4137.9646 kcal/mol (4124.6429 without restraints) Performing minimization step: 590. Total energy = 4136.5691 kcal/mol (4123.2520 without restraints) Performing minimization step: 591. Total energy = 4135.1789 kcal/mol (4121.8666 without restraints) Performing minimization step: 592. Total energy = 4133.7937 kcal/mol (4120.4861 without restraints) Performing minimization step: 593. Total energy = 4132.4125 kcal/mol (4119.1096 without restraints) Performing minimization step: 594. Total energy = 4131.0363 kcal/mol (4117.7381 without restraints) Performing minimization step: 595. Total energy = 4129.6650 kcal/mol (4116.3715 without restraints) Performing minimization step: 596. Total energy = 4128.2982 kcal/mol (4115.0095 without restraints) Performing minimization step: 597. Total energy = 4126.9354 kcal/mol (4113.6514 without restraints) Performing minimization step: 598. Total energy = 4125.5769 kcal/mol (4112.2974 without restraints) Performing minimization step: 599. Total energy = 4124.2228 kcal/mol (4110.9482 without restraints) Performing minimization step: 600. Total energy = 4122.8737 kcal/mol (4109.6039 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e0aaf9ce/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 601. Total energy = 4121.5291 kcal/mol (4108.2638 without restraints) Performing minimization step: 602. Total energy = 4120.1890 kcal/mol (4106.9286 without restraints) Performing minimization step: 603. Total energy = 4118.8534 kcal/mol (4105.5977 without restraints) Performing minimization step: 604. Total energy = 4117.5219 kcal/mol (4104.2710 without restraints) Performing minimization step: 605. Total energy = 4116.1952 kcal/mol (4102.9490 without restraints) Performing minimization step: 606. Total energy = 4114.8731 kcal/mol (4101.6316 without restraints) Performing minimization step: 607. Total energy = 4113.5549 kcal/mol (4100.3183 without restraints) Performing minimization step: 608. Total energy = 4112.2412 kcal/mol (4099.0092 without restraints) Performing minimization step: 609. Total energy = 4110.9313 kcal/mol (4097.7042 without restraints) Performing minimization step: 610. Total energy = 4109.6270 kcal/mol (4096.4049 without restraints) Performing minimization step: 611. Total energy = 4108.3265 kcal/mol (4095.1089 without restraints) Performing minimization step: 612. Total energy = 4107.0302 kcal/mol (4093.8175 without restraints) Performing minimization step: 613. Total energy = 4105.7380 kcal/mol (4092.5298 without restraints) Performing minimization step: 614. Total energy = 4104.4501 kcal/mol (4091.2470 without restraints) Performing minimization step: 615. Total energy = 4103.1671 kcal/mol (4089.9686 without restraints) Performing minimization step: 616. Total energy = 4101.8874 kcal/mol (4088.6938 without restraints) Performing minimization step: 617. Total energy = 4100.6121 kcal/mol (4087.4234 without restraints) Performing minimization step: 618. Total energy = 4099.3421 kcal/mol (4086.1582 without restraints) Performing minimization step: 619. Total energy = 4098.0761 kcal/mol (4084.8967 without restraints) Performing minimization step: 620. Total energy = 4096.8139 kcal/mol (4083.6393 without restraints) Performing minimization step: 621. Total energy = 4095.5557 kcal/mol (4082.3859 without restraints) Performing minimization step: 622. Total energy = 4094.3017 kcal/mol (4081.1368 without restraints) Performing minimization step: 623. Total energy = 4093.0517 kcal/mol (4079.8915 without restraints) Performing minimization step: 624. Total energy = 4091.8060 kcal/mol (4078.6507 without restraints) Performing minimization step: 625. Total energy = 4090.5639 kcal/mol (4077.4133 without restraints) Performing minimization step: 626. Total energy = 4089.3259 kcal/mol (4076.1802 without restraints) Performing minimization step: 627. Total energy = 4088.0921 kcal/mol (4074.9511 without restraints) Performing minimization step: 628. Total energy = 4086.8627 kcal/mol (4073.7267 without restraints) Performing minimization step: 629. Total energy = 4085.6371 kcal/mol (4072.5058 without restraints) Performing minimization step: 630. Total energy = 4084.4155 kcal/mol (4071.2890 without restraints) Performing minimization step: 631. Total energy = 4083.1982 kcal/mol (4070.0766 without restraints) Performing minimization step: 632. Total energy = 4081.9849 kcal/mol (4068.8681 without restraints) Performing minimization step: 633. Total energy = 4080.7743 kcal/mol (4067.6622 without restraints) Performing minimization step: 634. Total energy = 4079.5680 kcal/mol (4066.4608 without restraints) Performing minimization step: 635. Total energy = 4078.3661 kcal/mol (4065.2638 without restraints) Performing minimization step: 636. Total energy = 4077.1683 kcal/mol (4064.0708 without restraints) Performing minimization step: 637. Total energy = 4075.9743 kcal/mol (4062.8817 without restraints) Performing minimization step: 638. Total energy = 4074.7839 kcal/mol (4061.6961 without restraints) Performing minimization step: 639. Total energy = 4073.5974 kcal/mol (4060.5146 without restraints) Performing minimization step: 640. Total energy = 4072.4154 kcal/mol (4059.3373 without restraints) Performing minimization step: 641. Total energy = 4071.2368 kcal/mol (4058.1636 without restraints) Performing minimization step: 642. Total energy = 4070.0617 kcal/mol (4056.9933 without restraints) Performing minimization step: 643. Total energy = 4068.8903 kcal/mol (4055.8267 without restraints) Performing minimization step: 644. Total energy = 4067.7235 kcal/mol (4054.6650 without restraints) Performing minimization step: 645. Total energy = 4066.5602 kcal/mol (4053.5064 without restraints) Performing minimization step: 646. Total energy = 4065.4001 kcal/mol (4052.3511 without restraints) Performing minimization step: 647. Total energy = 4064.2433 kcal/mol (4051.1993 without restraints) Performing minimization step: 648. Total energy = 4063.0913 kcal/mol (4050.0522 without restraints) Performing minimization step: 649. Total energy = 4061.9428 kcal/mol (4048.9085 without restraints) Performing minimization step: 650. Total energy = 4060.7971 kcal/mol (4047.7676 without restraints) Performing minimization step: 651. Total energy = 4059.6556 kcal/mol (4046.6311 without restraints) Performing minimization step: 652. Total energy = 4058.5180 kcal/mol (4045.4984 without restraints) Performing minimization step: 653. Total energy = 4057.3837 kcal/mol (4044.3689 without restraints) Performing minimization step: 654. Total energy = 4056.2537 kcal/mol (4043.2439 without restraints) Performing minimization step: 655. Total energy = 4055.1271 kcal/mol (4042.1219 without restraints) Performing minimization step: 656. Total energy = 4054.0036 kcal/mol (4041.0035 without restraints) Performing minimization step: 657. Total energy = 4052.8834 kcal/mol (4039.8884 without restraints) Performing minimization step: 658. Total energy = 4051.7676 kcal/mol (4038.7774 without restraints) Performing minimization step: 659. Total energy = 4050.6541 kcal/mol (4037.6688 without restraints) Performing minimization step: 660. Total energy = 4049.5456 kcal/mol (4036.5651 without restraints) Performing minimization step: 661. Total energy = 4048.4399 kcal/mol (4035.4643 without restraints) Performing minimization step: 662. Total energy = 4047.3380 kcal/mol (4034.3675 without restraints) Performing minimization step: 663. Total energy = 4046.2396 kcal/mol (4033.2739 without restraints) Performing minimization step: 664. Total energy = 4045.1448 kcal/mol (4032.1840 without restraints) Performing minimization step: 665. Total energy = 4044.0531 kcal/mol (4031.0972 without restraints) Performing minimization step: 666. Total energy = 4042.9653 kcal/mol (4030.0145 without restraints) Performing minimization step: 667. Total energy = 4041.8810 kcal/mol (4028.9349 without restraints) Performing minimization step: 668. Total energy = 4040.8000 kcal/mol (4027.8589 without restraints) Performing minimization step: 669. Total energy = 4039.7224 kcal/mol (4026.7862 without restraints) Performing minimization step: 670. Total energy = 4038.6480 kcal/mol (4025.7168 without restraints) Performing minimization step: 671. Total energy = 4037.5771 kcal/mol (4024.6507 without restraints) Performing minimization step: 672. Total energy = 4036.5096 kcal/mol (4023.5884 without restraints) Performing minimization step: 673. Total energy = 4035.4459 kcal/mol (4022.5294 without restraints) Performing minimization step: 674. Total energy = 4034.3852 kcal/mol (4021.4737 without restraints) Performing minimization step: 675. Total energy = 4033.3277 kcal/mol (4020.4210 without restraints) Performing minimization step: 676. Total energy = 4032.2736 kcal/mol (4019.3721 without restraints) Performing minimization step: 677. Total energy = 4031.2232 kcal/mol (4018.3266 without restraints) Performing minimization step: 678. Total energy = 4030.1753 kcal/mol (4017.2835 without restraints) Performing minimization step: 679. Total energy = 4029.1308 kcal/mol (4016.2440 without restraints) Performing minimization step: 680. Total energy = 4028.0900 kcal/mol (4015.2082 without restraints) Performing minimization step: 681. Total energy = 4027.0519 kcal/mol (4014.1750 without restraints) Performing minimization step: 682. Total energy = 4026.0175 kcal/mol (4013.1456 without restraints) Performing minimization step: 683. Total energy = 4024.9861 kcal/mol (4012.1191 without restraints) Performing minimization step: 684. Total energy = 4023.9579 kcal/mol (4011.0959 without restraints) Performing minimization step: 685. Total energy = 4022.9334 kcal/mol (4010.0764 without restraints) Performing minimization step: 686. Total energy = 4021.9117 kcal/mol (4009.0597 without restraints) Performing minimization step: 687. Total energy = 4020.8931 kcal/mol (4008.0462 without restraints) Performing minimization step: 688. Total energy = 4019.8781 kcal/mol (4007.0361 without restraints) Performing minimization step: 689. Total energy = 4018.8659 kcal/mol (4006.0289 without restraints) Performing minimization step: 690. Total energy = 4017.8561 kcal/mol (4005.0240 without restraints) Performing minimization step: 691. Total energy = 4016.8502 kcal/mol (4004.0231 without restraints) Performing minimization step: 692. Total energy = 4015.8474 kcal/mol (4003.0253 without restraints) Performing minimization step: 693. Total energy = 4014.8474 kcal/mol (4002.0301 without restraints) Performing minimization step: 694. Total energy = 4013.8506 kcal/mol (4001.0384 without restraints) Performing minimization step: 695. Total energy = 4012.8567 kcal/mol (4000.0494 without restraints) Performing minimization step: 696. Total energy = 4011.8665 kcal/mol (3999.0644 without restraints) Performing minimization step: 697. Total energy = 4010.8791 kcal/mol (3998.0819 without restraints) Performing minimization step: 698. Total energy = 4009.8946 kcal/mol (3997.1024 without restraints) Performing minimization step: 699. Total energy = 4008.9131 kcal/mol (3996.1258 without restraints) Performing minimization step: 700. Total energy = 4007.9345 kcal/mol (3995.1523 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e0aaf9ce/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 701. Total energy = 4006.9587 kcal/mol (3994.1814 without restraints) Performing minimization step: 702. Total energy = 4005.9855 kcal/mol (3993.2133 without restraints) Performing minimization step: 703. Total energy = 4005.0159 kcal/mol (3992.2486 without restraints) Performing minimization step: 704. Total energy = 4004.0491 kcal/mol (3991.2869 without restraints) Performing minimization step: 705. Total energy = 4003.0854 kcal/mol (3990.3282 without restraints) Performing minimization step: 706. Total energy = 4002.1249 kcal/mol (3989.3728 without restraints) Performing minimization step: 707. Total energy = 4001.1670 kcal/mol (3988.4198 without restraints) Performing minimization step: 708. Total energy = 4000.2123 kcal/mol (3987.4700 without restraints) Performing minimization step: 709. Total energy = 3999.2602 kcal/mol (3986.5230 without restraints) Performing minimization step: 710. Total energy = 3998.3110 kcal/mol (3985.5788 without restraints) Performing minimization step: 711. Total energy = 3997.3646 kcal/mol (3984.6374 without restraints) Performing minimization step: 712. Total energy = 3996.4208 kcal/mol (3983.6987 without restraints) Performing minimization step: 713. Total energy = 3995.4807 kcal/mol (3982.7637 without restraints) Performing minimization step: 714. Total energy = 3994.5435 kcal/mol (3981.8314 without restraints) Performing minimization step: 715. Total energy = 3993.6083 kcal/mol (3980.9013 without restraints) Performing minimization step: 716. Total energy = 3992.6758 kcal/mol (3979.9738 without restraints) Performing minimization step: 717. Total energy = 3991.7466 kcal/mol (3979.0496 without restraints) Performing minimization step: 718. Total energy = 3990.8193 kcal/mol (3978.1272 without restraints) Performing minimization step: 719. Total energy = 3989.8954 kcal/mol (3977.2085 without restraints) Performing minimization step: 720. Total energy = 3988.9748 kcal/mol (3976.2929 without restraints) Performing minimization step: 721. Total energy = 3988.0562 kcal/mol (3975.3794 without restraints) Performing minimization step: 722. Total energy = 3987.1397 kcal/mol (3974.4679 without restraints) Performing minimization step: 723. Total energy = 3986.2270 kcal/mol (3973.5603 without restraints) Performing minimization step: 724. Total energy = 3985.3171 kcal/mol (3972.6554 without restraints) Performing minimization step: 725. Total energy = 3984.4095 kcal/mol (3971.7528 without restraints) Performing minimization step: 726. Total energy = 3983.5048 kcal/mol (3970.8531 without restraints) Performing minimization step: 727. Total energy = 3982.6030 kcal/mol (3969.9564 without restraints) Performing minimization step: 728. Total energy = 3981.7040 kcal/mol (3969.0624 without restraints) Performing minimization step: 729. Total energy = 3980.8079 kcal/mol (3968.1714 without restraints) Performing minimization step: 730. Total energy = 3979.9140 kcal/mol (3967.2826 without restraints) Performing minimization step: 731. Total energy = 3979.0230 kcal/mol (3966.3966 without restraints) Performing minimization step: 732. Total energy = 3978.1341 kcal/mol (3965.5126 without restraints) Performing minimization step: 733. Total energy = 3977.2477 kcal/mol (3964.6314 without restraints) Performing minimization step: 734. Total energy = 3976.3635 kcal/mol (3963.7522 without restraints) Performing minimization step: 735. Total energy = 3975.4825 kcal/mol (3962.8763 without restraints) Performing minimization step: 736. Total energy = 3974.6044 kcal/mol (3962.0033 without restraints) Performing minimization step: 737. Total energy = 3973.7289 kcal/mol (3961.1328 without restraints) Performing minimization step: 738. Total energy = 3972.8557 kcal/mol (3960.2647 without restraints) Performing minimization step: 739. Total energy = 3971.9853 kcal/mol (3959.3993 without restraints) Performing minimization step: 740. Total energy = 3971.1173 kcal/mol (3958.5364 without restraints) Performing minimization step: 741. Total energy = 3970.2518 kcal/mol (3957.6760 without restraints) Performing minimization step: 742. Total energy = 3969.3890 kcal/mol (3956.8183 without restraints) Performing minimization step: 743. Total energy = 3968.5288 kcal/mol (3955.9631 without restraints) Performing minimization step: 744. Total energy = 3967.6711 kcal/mol (3955.1105 without restraints) Performing minimization step: 745. Total energy = 3966.8159 kcal/mol (3954.2605 without restraints) Performing minimization step: 746. Total energy = 3965.9632 kcal/mol (3953.4128 without restraints) Performing minimization step: 747. Total energy = 3965.1130 kcal/mol (3952.5676 without restraints) Performing minimization step: 748. Total energy = 3964.2651 kcal/mol (3951.7247 without restraints) Performing minimization step: 749. Total energy = 3963.4196 kcal/mol (3950.8843 without restraints) Performing minimization step: 750. Total energy = 3962.5766 kcal/mol (3950.0464 without restraints) Performing minimization step: 751. Total energy = 3961.7356 kcal/mol (3949.2105 without restraints) Performing minimization step: 752. Total energy = 3960.8977 kcal/mol (3948.3777 without restraints) Performing minimization step: 753. Total energy = 3960.0616 kcal/mol (3947.5467 without restraints) Performing minimization step: 754. Total energy = 3959.2284 kcal/mol (3946.7185 without restraints) Performing minimization step: 755. Total energy = 3958.3975 kcal/mol (3945.8926 without restraints) Performing minimization step: 756. Total energy = 3957.5687 kcal/mol (3945.0687 without restraints) Performing minimization step: 757. Total energy = 3956.7425 kcal/mol (3944.2477 without restraints) Performing minimization step: 758. Total energy = 3955.9184 kcal/mol (3943.4288 without restraints) Performing minimization step: 759. Total energy = 3955.0964 kcal/mol (3942.6119 without restraints) Performing minimization step: 760. Total energy = 3954.2770 kcal/mol (3941.7974 without restraints) Performing minimization step: 761. Total energy = 3953.4602 kcal/mol (3940.9858 without restraints) Performing minimization step: 762. Total energy = 3952.6456 kcal/mol (3940.1763 without restraints) Performing minimization step: 763. Total energy = 3951.8337 kcal/mol (3939.3696 without restraints) Performing minimization step: 764. Total energy = 3951.0244 kcal/mol (3938.5653 without restraints) Performing minimization step: 765. Total energy = 3950.2166 kcal/mol (3937.7626 without restraints) Performing minimization step: 766. Total energy = 3949.4112 kcal/mol (3936.9622 without restraints) Performing minimization step: 767. Total energy = 3948.6080 kcal/mol (3936.1643 without restraints) Performing minimization step: 768. Total energy = 3947.8073 kcal/mol (3935.3685 without restraints) Performing minimization step: 769. Total energy = 3947.0091 kcal/mol (3934.5754 without restraints) Performing minimization step: 770. Total energy = 3946.2132 kcal/mol (3933.7846 without restraints) Performing minimization step: 771. Total energy = 3945.4193 kcal/mol (3932.9958 without restraints) Performing minimization step: 772. Total energy = 3944.6277 kcal/mol (3932.2093 without restraints) Performing minimization step: 773. Total energy = 3943.8383 kcal/mol (3931.4251 without restraints) Performing minimization step: 774. Total energy = 3943.0517 kcal/mol (3930.6437 without restraints) Performing minimization step: 775. Total energy = 3942.2671 kcal/mol (3929.8637 without restraints) Performing minimization step: 776. Total energy = 3941.4841 kcal/mol (3929.0860 without restraints) Performing minimization step: 777. Total energy = 3940.7035 kcal/mol (3928.3106 without restraints) Performing minimization step: 778. Total energy = 3939.9254 kcal/mol (3927.5375 without restraints) Performing minimization step: 779. Total energy = 3939.1495 kcal/mol (3926.7668 without restraints) Performing minimization step: 780. Total energy = 3938.3750 kcal/mol (3925.9973 without restraints) Performing minimization step: 781. Total energy = 3937.6030 kcal/mol (3925.2304 without restraints) Performing minimization step: 782. Total energy = 3936.8334 kcal/mol (3924.4659 without restraints) Performing minimization step: 783. Total energy = 3936.0654 kcal/mol (3923.7030 without restraints) Performing minimization step: 784. Total energy = 3935.2996 kcal/mol (3922.9422 without restraints) Performing minimization step: 785. Total energy = 3934.5365 kcal/mol (3922.1842 without restraints) Performing minimization step: 786. Total energy = 3933.7750 kcal/mol (3921.4278 without restraints) Performing minimization step: 787. Total energy = 3933.0157 kcal/mol (3920.6735 without restraints) Performing minimization step: 788. Total energy = 3932.2582 kcal/mol (3919.9210 without restraints) Performing minimization step: 789. Total energy = 3931.5034 kcal/mol (3919.1715 without restraints) Performing minimization step: 790. Total energy = 3930.7499 kcal/mol (3918.4232 without restraints) Performing minimization step: 791. Total energy = 3929.9988 kcal/mol (3917.6771 without restraints) Performing minimization step: 792. Total energy = 3929.2501 kcal/mol (3916.9335 without restraints) Performing minimization step: 793. Total energy = 3928.5030 kcal/mol (3916.1913 without restraints) Performing minimization step: 794. Total energy = 3927.7576 kcal/mol (3915.4512 without restraints) Performing minimization step: 795. Total energy = 3927.0148 kcal/mol (3914.7135 without restraints) Performing minimization step: 796. Total energy = 3926.2740 kcal/mol (3913.9778 without restraints) Performing minimization step: 797. Total energy = 3925.5354 kcal/mol (3913.2443 without restraints) Performing minimization step: 798. Total energy = 3924.7984 kcal/mol (3912.5125 without restraints) Performing minimization step: 799. Total energy = 3924.0635 kcal/mol (3911.7826 without restraints) Performing minimization step: 800. Total energy = 3923.3308 kcal/mol (3911.0549 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e0aaf9ce/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 801. Total energy = 3922.6004 kcal/mol (3910.3297 without restraints) Performing minimization step: 802. Total energy = 3921.8714 kcal/mol (3909.6057 without restraints) Performing minimization step: 803. Total energy = 3921.1446 kcal/mol (3908.8840 without restraints) Performing minimization step: 804. Total energy = 3920.4197 kcal/mol (3908.1642 without restraints) Performing minimization step: 805. Total energy = 3919.6965 kcal/mol (3907.4461 without restraints) Performing minimization step: 806. Total energy = 3918.9757 kcal/mol (3906.7303 without restraints) Performing minimization step: 807. Total energy = 3918.2562 kcal/mol (3906.0160 without restraints) Performing minimization step: 808. Total energy = 3917.5390 kcal/mol (3905.3040 without restraints) Performing minimization step: 809. Total energy = 3916.8239 kcal/mol (3904.5938 without restraints) Performing minimization step: 810. Total energy = 3916.1104 kcal/mol (3903.8855 without restraints) Performing minimization step: 811. Total energy = 3915.3989 kcal/mol (3903.1790 without restraints) Performing minimization step: 812. Total energy = 3914.6892 kcal/mol (3902.4744 without restraints) Performing minimization step: 813. Total energy = 3913.9813 kcal/mol (3901.7717 without restraints) Performing minimization step: 814. Total energy = 3913.2756 kcal/mol (3901.0709 without restraints) Performing minimization step: 815. Total energy = 3912.5711 kcal/mol (3900.3716 without restraints) Performing minimization step: 816. Total energy = 3911.8685 kcal/mol (3899.6740 without restraints) Performing minimization step: 817. Total energy = 3911.1680 kcal/mol (3898.9788 without restraints) Performing minimization step: 818. Total energy = 3910.4694 kcal/mol (3898.2851 without restraints) Performing minimization step: 819. Total energy = 3909.7724 kcal/mol (3897.5932 without restraints) Performing minimization step: 820. Total energy = 3909.0775 kcal/mol (3896.9034 without restraints) Performing minimization step: 821. Total energy = 3908.3842 kcal/mol (3896.2152 without restraints) Performing minimization step: 822. Total energy = 3907.6925 kcal/mol (3895.5286 without restraints) Performing minimization step: 823. Total energy = 3907.0027 kcal/mol (3894.8437 without restraints) Performing minimization step: 824. Total energy = 3906.3149 kcal/mol (3894.1613 without restraints) Performing minimization step: 825. Total energy = 3905.6291 kcal/mol (3893.4804 without restraints) Performing minimization step: 826. Total energy = 3904.9451 kcal/mol (3892.8016 without restraints) Performing minimization step: 827. Total energy = 3904.2628 kcal/mol (3892.1243 without restraints) Performing minimization step: 828. Total energy = 3903.5825 kcal/mol (3891.4492 without restraints) Performing minimization step: 829. Total energy = 3902.9036 kcal/mol (3890.7753 without restraints) Performing minimization step: 830. Total energy = 3902.2261 kcal/mol (3890.1026 without restraints) Performing minimization step: 831. Total energy = 3901.5501 kcal/mol (3889.4317 without restraints) Performing minimization step: 832. Total energy = 3900.8760 kcal/mol (3888.7628 without restraints) Performing minimization step: 833. Total energy = 3900.2042 kcal/mol (3888.0962 without restraints) Performing minimization step: 834. Total energy = 3899.5344 kcal/mol (3887.4314 without restraints) Performing minimization step: 835. Total energy = 3898.8656 kcal/mol (3886.7677 without restraints) Performing minimization step: 836. Total energy = 3898.1993 kcal/mol (3886.1064 without restraints) Performing minimization step: 837. Total energy = 3897.5342 kcal/mol (3885.4464 without restraints) Performing minimization step: 838. Total energy = 3896.8709 kcal/mol (3884.7881 without restraints) Performing minimization step: 839. Total energy = 3896.2090 kcal/mol (3884.1312 without restraints) Performing minimization step: 840. Total energy = 3895.5488 kcal/mol (3883.4762 without restraints) Performing minimization step: 841. Total energy = 3894.8909 kcal/mol (3882.8233 without restraints) Performing minimization step: 842. Total energy = 3894.2337 kcal/mol (3882.1712 without restraints) Performing minimization step: 843. Total energy = 3893.5784 kcal/mol (3881.5209 without restraints) Performing minimization step: 844. Total energy = 3892.9249 kcal/mol (3880.8725 without restraints) Performing minimization step: 845. Total energy = 3892.2730 kcal/mol (3880.2257 without restraints) Performing minimization step: 846. Total energy = 3891.6222 kcal/mol (3879.5799 without restraints) Performing minimization step: 847. Total energy = 3890.9733 kcal/mol (3878.9361 without restraints) Performing minimization step: 848. Total energy = 3890.3261 kcal/mol (3878.2939 without restraints) Performing minimization step: 849. Total energy = 3889.6807 kcal/mol (3877.6536 without restraints) Performing minimization step: 850. Total energy = 3889.0369 kcal/mol (3877.0149 without restraints) Performing minimization step: 851. Total energy = 3888.3946 kcal/mol (3876.3777 without restraints) Performing minimization step: 852. Total energy = 3887.7532 kcal/mol (3875.7411 without restraints) Performing minimization step: 853. Total energy = 3887.1142 kcal/mol (3875.1073 without restraints) Performing minimization step: 854. Total energy = 3886.4768 kcal/mol (3874.4750 without restraints) Performing minimization step: 855. Total energy = 3885.8411 kcal/mol (3873.8444 without restraints) Performing minimization step: 856. Total energy = 3885.2067 kcal/mol (3873.2149 without restraints) Performing minimization step: 857. Total energy = 3884.5738 kcal/mol (3872.5870 without restraints) Performing minimization step: 858. Total energy = 3883.9426 kcal/mol (3871.9608 without restraints) Performing minimization step: 859. Total energy = 3883.3128 kcal/mol (3871.3362 without restraints) Performing minimization step: 860. Total energy = 3882.6843 kcal/mol (3870.7127 without restraints) Performing minimization step: 861. Total energy = 3882.0579 kcal/mol (3870.0914 without restraints) Performing minimization step: 862. Total energy = 3881.4325 kcal/mol (3869.4710 without restraints) Performing minimization step: 863. Total energy = 3880.8091 kcal/mol (3868.8527 without restraints) Performing minimization step: 864. Total energy = 3880.1873 kcal/mol (3868.2358 without restraints) Performing minimization step: 865. Total energy = 3879.5663 kcal/mol (3867.6197 without restraints) Performing minimization step: 866. Total energy = 3878.9474 kcal/mol (3867.0060 without restraints) Performing minimization step: 867. Total energy = 3878.3296 kcal/mol (3866.3933 without restraints) Performing minimization step: 868. Total energy = 3877.7132 kcal/mol (3865.7819 without restraints) Performing minimization step: 869. Total energy = 3877.0984 kcal/mol (3865.1720 without restraints) Performing minimization step: 870. Total energy = 3876.4851 kcal/mol (3864.5637 without restraints) Performing minimization step: 871. Total energy = 3875.8733 kcal/mol (3863.9570 without restraints) Performing minimization step: 872. Total energy = 3875.2628 kcal/mol (3863.3517 without restraints) Performing minimization step: 873. Total energy = 3874.6539 kcal/mol (3862.7476 without restraints) Performing minimization step: 874. Total energy = 3874.0465 kcal/mol (3862.1453 without restraints) Performing minimization step: 875. Total energy = 3873.4409 kcal/mol (3861.5448 without restraints) Performing minimization step: 876. Total energy = 3872.8363 kcal/mol (3860.9451 without restraints) Performing minimization step: 877. Total energy = 3872.2334 kcal/mol (3860.3472 without restraints) Performing minimization step: 878. Total energy = 3871.6317 kcal/mol (3859.7505 without restraints) Performing minimization step: 879. Total energy = 3871.0314 kcal/mol (3859.1552 without restraints) Performing minimization step: 880. Total energy = 3870.4328 kcal/mol (3858.5616 without restraints) Performing minimization step: 881. Total energy = 3869.8354 kcal/mol (3857.9692 without restraints) Performing minimization step: 882. Total energy = 3869.2391 kcal/mol (3857.3776 without restraints) Performing minimization step: 883. Total energy = 3868.6437 kcal/mol (3856.7874 without restraints) Performing minimization step: 884. Total energy = 3868.0503 kcal/mol (3856.1991 without restraints) Performing minimization step: 885. Total energy = 3867.4588 kcal/mol (3855.6125 without restraints) Performing minimization step: 886. Total energy = 3866.8676 kcal/mol (3855.0263 without restraints) Performing minimization step: 887. Total energy = 3866.2783 kcal/mol (3854.4421 without restraints) Performing minimization step: 888. Total energy = 3865.6904 kcal/mol (3853.8591 without restraints) Performing minimization step: 889. Total energy = 3865.1038 kcal/mol (3853.2775 without restraints) Performing minimization step: 890. Total energy = 3864.5185 kcal/mol (3852.6972 without restraints) Performing minimization step: 891. Total energy = 3863.9345 kcal/mol (3852.1182 without restraints) Performing minimization step: 892. Total energy = 3863.3523 kcal/mol (3851.5409 without restraints) Performing minimization step: 893. Total energy = 3862.7713 kcal/mol (3850.9649 without restraints) Performing minimization step: 894. Total energy = 3862.1908 kcal/mol (3850.3895 without restraints) Performing minimization step: 895. Total energy = 3861.6124 kcal/mol (3849.8160 without restraints) Performing minimization step: 896. Total energy = 3861.0352 kcal/mol (3849.2438 without restraints) Performing minimization step: 897. Total energy = 3860.4590 kcal/mol (3848.6725 without restraints) Performing minimization step: 898. Total energy = 3859.8844 kcal/mol (3848.1030 without restraints) Performing minimization step: 899. Total energy = 3859.3112 kcal/mol (3847.5347 without restraints) Performing minimization step: 900. Total energy = 3858.7388 kcal/mol (3846.9672 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e0aaf9ce/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 901. Total energy = 3858.1681 kcal/mol (3846.4014 without restraints) Performing minimization step: 902. Total energy = 3857.5982 kcal/mol (3845.8365 without restraints) Performing minimization step: 903. Total energy = 3857.0298 kcal/mol (3845.2730 without restraints) Performing minimization step: 904. Total energy = 3856.4621 kcal/mol (3844.7100 without restraints) Performing minimization step: 905. Total energy = 3855.8962 kcal/mol (3844.1493 without restraints) Performing minimization step: 906. Total energy = 3855.3319 kcal/mol (3843.5901 without restraints) Performing minimization step: 907. Total energy = 3854.7688 kcal/mol (3843.0318 without restraints) Performing minimization step: 908. Total energy = 3854.2058 kcal/mol (3842.4738 without restraints) Performing minimization step: 909. Total energy = 3853.6449 kcal/mol (3841.9180 without restraints) Performing minimization step: 910. Total energy = 3853.0855 kcal/mol (3841.3632 without restraints) Performing minimization step: 911. Total energy = 3852.5271 kcal/mol (3840.8099 without restraints) Performing minimization step: 912. Total energy = 3851.9700 kcal/mol (3840.2577 without restraints) Performing minimization step: 913. Total energy = 3851.4141 kcal/mol (3839.7066 without restraints) Performing minimization step: 914. Total energy = 3850.8589 kcal/mol (3839.1564 without restraints) Performing minimization step: 915. Total energy = 3850.3054 kcal/mol (3838.6078 without restraints) Performing minimization step: 916. Total energy = 3849.7531 kcal/mol (3838.0605 without restraints) Performing minimization step: 917. Total energy = 3849.2020 kcal/mol (3837.5143 without restraints) Performing minimization step: 918. Total energy = 3848.6523 kcal/mol (3836.9695 without restraints) Performing minimization step: 919. Total energy = 3848.1028 kcal/mol (3836.4249 without restraints) Performing minimization step: 920. Total energy = 3847.5551 kcal/mol (3835.8821 without restraints) Performing minimization step: 921. Total energy = 3847.0086 kcal/mol (3835.3405 without restraints) Performing minimization step: 922. Total energy = 3846.4629 kcal/mol (3834.7997 without restraints) Performing minimization step: 923. Total energy = 3845.9188 kcal/mol (3834.2604 without restraints) Performing minimization step: 924. Total energy = 3845.3755 kcal/mol (3833.7221 without restraints) Performing minimization step: 925. Total energy = 3844.8340 kcal/mol (3833.1854 without restraints) Performing minimization step: 926. Total energy = 3844.2930 kcal/mol (3832.6493 without restraints) Performing minimization step: 927. Total energy = 3843.7537 kcal/mol (3832.1150 without restraints) Performing minimization step: 928. Total energy = 3843.2154 kcal/mol (3831.5816 without restraints) Performing minimization step: 929. Total energy = 3842.6780 kcal/mol (3831.0490 without restraints) Performing minimization step: 930. Total energy = 3842.1421 kcal/mol (3830.5181 without restraints) Performing minimization step: 931. Total energy = 3841.6073 kcal/mol (3829.9880 without restraints) Performing minimization step: 932. Total energy = 3841.0731 kcal/mol (3829.4588 without restraints) Performing minimization step: 933. Total energy = 3840.5402 kcal/mol (3828.9307 without restraints) Performing minimization step: 934. Total energy = 3840.0085 kcal/mol (3828.4039 without restraints) Performing minimization step: 935. Total energy = 3839.4779 kcal/mol (3827.8782 without restraints) Performing minimization step: 936. Total energy = 3838.9482 kcal/mol (3827.3532 without restraints) Performing minimization step: 937. Total energy = 3838.4197 kcal/mol (3826.8296 without restraints) Performing minimization step: 938. Total energy = 3837.8923 kcal/mol (3826.3071 without restraints) Performing minimization step: 939. Total energy = 3837.3661 kcal/mol (3825.7858 without restraints) Performing minimization step: 940. Total energy = 3836.8413 kcal/mol (3825.2659 without restraints) Performing minimization step: 941. Total energy = 3836.3173 kcal/mol (3824.7467 without restraints) Performing minimization step: 942. Total energy = 3835.7942 kcal/mol (3824.2284 without restraints) Performing minimization step: 943. Total energy = 3835.2720 kcal/mol (3823.7110 without restraints) Performing minimization step: 944. Total energy = 3834.7505 kcal/mol (3823.1942 without restraints) Performing minimization step: 945. Total energy = 3834.2308 kcal/mol (3822.6797 without restraints) Performing minimization step: 946. Total energy = 3833.7126 kcal/mol (3822.1662 without restraints) Performing minimization step: 947. Total energy = 3833.1955 kcal/mol (3821.6538 without restraints) Performing minimization step: 948. Total energy = 3832.6792 kcal/mol (3821.1423 without restraints) Performing minimization step: 949. Total energy = 3832.1631 kcal/mol (3820.6311 without restraints) Performing minimization step: 950. Total energy = 3831.6486 kcal/mol (3820.1214 without restraints) Performing minimization step: 951. Total energy = 3831.1354 kcal/mol (3819.6132 without restraints) Performing minimization step: 952. Total energy = 3830.6232 kcal/mol (3819.1056 without restraints) Performing minimization step: 953. Total energy = 3830.1117 kcal/mol (3818.5989 without restraints) Performing minimization step: 954. Total energy = 3829.6009 kcal/mol (3818.0929 without restraints) Performing minimization step: 955. Total energy = 3829.0915 kcal/mol (3817.5883 without restraints) Performing minimization step: 956. Total energy = 3828.5831 kcal/mol (3817.0847 without restraints) Performing minimization step: 957. Total energy = 3828.0753 kcal/mol (3816.5818 without restraints) Performing minimization step: 958. Total energy = 3827.5688 kcal/mol (3816.0800 without restraints) Performing minimization step: 959. Total energy = 3827.0632 kcal/mol (3815.5792 without restraints) Performing minimization step: 960. Total energy = 3826.5578 kcal/mol (3815.0786 without restraints) Performing minimization step: 961. Total energy = 3826.0541 kcal/mol (3814.5797 without restraints) Performing minimization step: 962. Total energy = 3825.5516 kcal/mol (3814.0820 without restraints) Performing minimization step: 963. Total energy = 3825.0502 kcal/mol (3813.5853 without restraints) Performing minimization step: 964. Total energy = 3824.5494 kcal/mol (3813.0892 without restraints) Performing minimization step: 965. Total energy = 3824.0491 kcal/mol (3812.5938 without restraints) Performing minimization step: 966. Total energy = 3823.5506 kcal/mol (3812.1000 without restraints) Performing minimization step: 967. Total energy = 3823.0528 kcal/mol (3811.6070 without restraints) Performing minimization step: 968. Total energy = 3822.5559 kcal/mol (3811.1148 without restraints) Performing minimization step: 969. Total energy = 3822.0599 kcal/mol (3810.6236 without restraints) Performing minimization step: 970. Total energy = 3821.5650 kcal/mol (3810.1334 without restraints) Performing minimization step: 971. Total energy = 3821.0708 kcal/mol (3809.6439 without restraints) Performing minimization step: 972. Total energy = 3820.5776 kcal/mol (3809.1555 without restraints) Performing minimization step: 973. Total energy = 3820.0856 kcal/mol (3808.6683 without restraints) Performing minimization step: 974. Total energy = 3819.5942 kcal/mol (3808.1815 without restraints) Performing minimization step: 975. Total energy = 3819.1041 kcal/mol (3807.6961 without restraints) Performing minimization step: 976. Total energy = 3818.6144 kcal/mol (3807.2111 without restraints) Performing minimization step: 977. Total energy = 3818.1253 kcal/mol (3806.7269 without restraints) Performing minimization step: 978. Total energy = 3817.6373 kcal/mol (3806.2435 without restraints) Performing minimization step: 979. Total energy = 3817.1505 kcal/mol (3805.7615 without restraints) Performing minimization step: 980. Total energy = 3816.6650 kcal/mol (3805.2807 without restraints) Performing minimization step: 981. Total energy = 3816.1798 kcal/mol (3804.8002 without restraints) Performing minimization step: 982. Total energy = 3815.6958 kcal/mol (3804.3211 without restraints) Performing minimization step: 983. Total energy = 3815.2133 kcal/mol (3803.8431 without restraints) Performing minimization step: 984. Total energy = 3814.7311 kcal/mol (3803.3656 without restraints) Performing minimization step: 985. Total energy = 3814.2500 kcal/mol (3802.8892 without restraints) Performing minimization step: 986. Total energy = 3813.7696 kcal/mol (3802.4137 without restraints) Performing minimization step: 987. Total energy = 3813.2901 kcal/mol (3801.9388 without restraints) Performing minimization step: 988. Total energy = 3812.8116 kcal/mol (3801.4649 without restraints) Performing minimization step: 989. Total energy = 3812.3338 kcal/mol (3800.9917 without restraints) Performing minimization step: 990. Total energy = 3811.8567 kcal/mol (3800.5193 without restraints) Performing minimization step: 991. Total energy = 3811.3808 kcal/mol (3800.0481 without restraints) Performing minimization step: 992. Total energy = 3810.9058 kcal/mol (3799.5777 without restraints) Performing minimization step: 993. Total energy = 3810.4315 kcal/mol (3799.1082 without restraints) Performing minimization step: 994. Total energy = 3809.9582 kcal/mol (3798.6396 without restraints) Performing minimization step: 995. Total energy = 3809.4859 kcal/mol (3798.1719 without restraints) Performing minimization step: 996. Total energy = 3809.0142 kcal/mol (3797.7049 without restraints) Performing minimization step: 997. Total energy = 3808.5431 kcal/mol (3797.2382 without restraints) Performing minimization step: 998. Total energy = 3808.0727 kcal/mol (3796.7725 without restraints) Performing minimization step: 999. Total energy = 3807.6032 kcal/mol (3796.3078 without restraints) Performing minimization step: 1000. Total energy = 3807.1351 kcal/mol (3795.8445 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e0aaf9ce/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 1001. Total energy = 3806.6677 kcal/mol (3795.3816 without restraints) Performing minimization step: 1002. Total energy = 3806.2003 kcal/mol (3794.9187 without restraints) Performing minimization step: 1003. Total energy = 3805.7345 kcal/mol (3794.4576 without restraints) Performing minimization step: 1004. Total energy = 3805.2693 kcal/mol (3793.9971 without restraints) Performing minimization step: 1005. Total energy = 3804.8052 kcal/mol (3793.5376 without restraints) Performing minimization step: 1006. Total energy = 3804.3420 kcal/mol (3793.0791 without restraints) Performing minimization step: 1007. Total energy = 3803.8793 kcal/mol (3792.6208 without restraints) Performing minimization step: 1008. Total energy = 3803.4175 kcal/mol (3792.1637 without restraints) Performing minimization step: 1009. Total energy = 3802.9561 kcal/mol (3791.7069 without restraints) Performing minimization step: 1010. Total energy = 3802.4962 kcal/mol (3791.2517 without restraints) Performing minimization step: 1011. Total energy = 3802.0366 kcal/mol (3790.7966 without restraints) Performing minimization step: 1012. Total energy = 3801.5779 kcal/mol (3790.3425 without restraints) Performing minimization step: 1013. Total energy = 3801.1200 kcal/mol (3789.8892 without restraints) Performing minimization step: 1014. Total energy = 3800.6629 kcal/mol (3789.4365 without restraints) Performing minimization step: 1015. Total energy = 3800.2061 kcal/mol (3788.9844 without restraints) Performing minimization step: 1016. Total energy = 3799.7502 kcal/mol (3788.5333 without restraints) Performing minimization step: 1017. Total energy = 3799.2960 kcal/mol (3788.0836 without restraints) Performing minimization step: 1018. Total energy = 3798.8422 kcal/mol (3787.6342 without restraints) Performing minimization step: 1019. Total energy = 3798.3886 kcal/mol (3787.1853 without restraints) Performing minimization step: 1020. Total energy = 3797.9358 kcal/mol (3786.7369 without restraints) Performing minimization step: 1021. Total energy = 3797.4842 kcal/mol (3786.2901 without restraints) Performing minimization step: 1022. Total energy = 3797.0334 kcal/mol (3785.8438 without restraints) Performing minimization step: 1023. Total energy = 3796.5834 kcal/mol (3785.3984 without restraints) Performing minimization step: 1024. Total energy = 3796.1339 kcal/mol (3784.9534 without restraints) Performing minimization step: 1025. Total energy = 3795.6849 kcal/mol (3784.5088 without restraints) Performing minimization step: 1026. Total energy = 3795.2369 kcal/mol (3784.0655 without restraints) Performing minimization step: 1027. Total energy = 3794.7899 kcal/mol (3783.6231 without restraints) Performing minimization step: 1028. Total energy = 3794.3440 kcal/mol (3783.1817 without restraints) Performing minimization step: 1029. Total energy = 3793.8985 kcal/mol (3782.7407 without restraints) Performing minimization step: 1030. Total energy = 3793.4538 kcal/mol (3782.3006 without restraints) Performing minimization step: 1031. Total energy = 3793.0102 kcal/mol (3781.8616 without restraints) Performing minimization step: 1032. Total energy = 3792.5672 kcal/mol (3781.4229 without restraints) Performing minimization step: 1033. Total energy = 3792.1241 kcal/mol (3780.9842 without restraints) Performing minimization step: 1034. Total energy = 3791.6819 kcal/mol (3780.5467 without restraints) Performing minimization step: 1035. Total energy = 3791.2409 kcal/mol (3780.1103 without restraints) Performing minimization step: 1036. Total energy = 3790.8012 kcal/mol (3779.6751 without restraints) Performing minimization step: 1037. Total energy = 3790.3617 kcal/mol (3779.2401 without restraints) Performing minimization step: 1038. Total energy = 3789.9231 kcal/mol (3778.8058 without restraints) Performing minimization step: 1039. Total energy = 3789.4843 kcal/mol (3778.3716 without restraints) Performing minimization step: 1040. Total energy = 3789.0464 kcal/mol (3777.9382 without restraints) Performing minimization step: 1041. Total energy = 3788.6095 kcal/mol (3777.5058 without restraints) Performing minimization step: 1042. Total energy = 3788.1734 kcal/mol (3777.0742 without restraints) Performing minimization step: 1043. Total energy = 3787.7382 kcal/mol (3776.6434 without restraints) Performing minimization step: 1044. Total energy = 3787.3027 kcal/mol (3776.2124 without restraints) Performing minimization step: 1045. Total energy = 3786.8681 kcal/mol (3775.7822 without restraints) Performing minimization step: 1046. Total energy = 3786.4354 kcal/mol (3775.3540 without restraints) Performing minimization step: 1047. Total energy = 3786.0025 kcal/mol (3774.9256 without restraints) Performing minimization step: 1048. Total energy = 3785.5698 kcal/mol (3774.4974 without restraints) Performing minimization step: 1049. Total energy = 3785.1389 kcal/mol (3774.0709 without restraints) Performing minimization step: 1050. Total energy = 3784.7081 kcal/mol (3773.6445 without restraints) Performing minimization step: 1051. Total energy = 3784.2783 kcal/mol (3773.2192 without restraints) Performing minimization step: 1052. Total energy = 3783.8486 kcal/mol (3772.7939 without restraints) Performing minimization step: 1053. Total energy = 3783.4203 kcal/mol (3772.3700 without restraints) Performing minimization step: 1054. Total energy = 3782.9926 kcal/mol (3771.9471 without restraints) Performing minimization step: 1055. Total energy = 3782.5656 kcal/mol (3771.5241 without restraints) Performing minimization step: 1056. Total energy = 3782.1390 kcal/mol (3771.1020 without restraints) Performing minimization step: 1057. Total energy = 3781.7129 kcal/mol (3770.6804 without restraints) Performing minimization step: 1058. Total energy = 3781.2877 kcal/mol (3770.2597 without restraints) Performing minimization step: 1059. Total energy = 3780.8633 kcal/mol (3769.8397 without restraints) Performing minimization step: 1060. Total energy = 3780.4392 kcal/mol (3769.4198 without restraints) Performing minimization step: 1061. Total energy = 3780.0159 kcal/mol (3769.0011 without restraints) Performing minimization step: 1062. Total energy = 3779.5930 kcal/mol (3768.5825 without restraints) Performing minimization step: 1063. Total energy = 3779.1711 kcal/mol (3768.1651 without restraints) Performing minimization step: 1064. Total energy = 3778.7493 kcal/mol (3767.7477 without restraints) Performing minimization step: 1065. Total energy = 3778.3285 kcal/mol (3767.3311 without restraints) Performing minimization step: 1066. Total energy = 3777.9086 kcal/mol (3766.9158 without restraints) Performing minimization step: 1067. Total energy = 3777.4897 kcal/mol (3766.5012 without restraints) Performing minimization step: 1068. Total energy = 3777.0705 kcal/mol (3766.0864 without restraints) Performing minimization step: 1069. Total energy = 3776.6522 kcal/mol (3765.6724 without restraints) Performing minimization step: 1070. Total energy = 3776.2347 kcal/mol (3765.2593 without restraints) Performing minimization step: 1071. Total energy = 3775.8174 kcal/mol (3764.8464 without restraints) Performing minimization step: 1072. Total energy = 3775.4012 kcal/mol (3764.4347 without restraints) Performing minimization step: 1073. Total energy = 3774.9857 kcal/mol (3764.0234 without restraints) Performing minimization step: 1074. Total energy = 3774.5704 kcal/mol (3763.6124 without restraints) Performing minimization step: 1075. Total energy = 3774.1559 kcal/mol (3763.2024 without restraints) Performing minimization step: 1076. Total energy = 3773.7418 kcal/mol (3762.7926 without restraints) Performing minimization step: 1077. Total energy = 3773.3286 kcal/mol (3762.3838 without restraints) Performing minimization step: 1078. Total energy = 3772.9159 kcal/mol (3761.9753 without restraints) Performing minimization step: 1079. Total energy = 3772.5035 kcal/mol (3761.5673 without restraints) Performing minimization step: 1080. Total energy = 3772.0920 kcal/mol (3761.1602 without restraints) Performing minimization step: 1081. Total energy = 3771.6812 kcal/mol (3760.7537 without restraints) Performing minimization step: 1082. Total energy = 3771.2709 kcal/mol (3760.3479 without restraints) Performing minimization step: 1083. Total energy = 3770.8616 kcal/mol (3759.9426 without restraints) Performing minimization step: 1084. Total energy = 3770.4521 kcal/mol (3759.5375 without restraints) Performing minimization step: 1085. Total energy = 3770.0439 kcal/mol (3759.1337 without restraints) Performing minimization step: 1086. Total energy = 3769.6363 kcal/mol (3758.7305 without restraints) Performing minimization step: 1087. Total energy = 3769.2292 kcal/mol (3758.3276 without restraints) Performing minimization step: 1088. Total energy = 3768.8222 kcal/mol (3757.9248 without restraints) Performing minimization step: 1089. Total energy = 3768.4161 kcal/mol (3757.5231 without restraints) Performing minimization step: 1090. Total energy = 3768.0108 kcal/mol (3757.1221 without restraints) Performing minimization step: 1091. Total energy = 3767.6061 kcal/mol (3756.7217 without restraints) Performing minimization step: 1092. Total energy = 3767.2021 kcal/mol (3756.3221 without restraints) Performing minimization step: 1093. Total energy = 3766.7986 kcal/mol (3755.9228 without restraints) Performing minimization step: 1094. Total energy = 3766.3958 kcal/mol (3755.5240 without restraints) Performing minimization step: 1095. Total energy = 3765.9930 kcal/mol (3755.1255 without restraints) Performing minimization step: 1096. Total energy = 3765.5912 kcal/mol (3754.7280 without restraints) Performing minimization step: 1097. Total energy = 3765.1903 kcal/mol (3754.3314 without restraints) Performing minimization step: 1098. Total energy = 3764.7893 kcal/mol (3753.9348 without restraints) Performing minimization step: 1099. Total energy = 3764.3888 kcal/mol (3753.5386 without restraints) Performing minimization step: 1100. Total energy = 3763.9891 kcal/mol (3753.1431 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e0aaf9ce/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 1101. Total energy = 3763.5899 kcal/mol (3752.7481 without restraints) Performing minimization step: 1102. Total energy = 3763.1916 kcal/mol (3752.3541 without restraints) Performing minimization step: 1103. Total energy = 3762.7942 kcal/mol (3751.9611 without restraints) Performing minimization step: 1104. Total energy = 3762.3978 kcal/mol (3751.5688 without restraints) Performing minimization step: 1105. Total energy = 3762.0012 kcal/mol (3751.1765 without restraints) Performing minimization step: 1106. Total energy = 3761.6052 kcal/mol (3750.7847 without restraints) Performing minimization step: 1107. Total energy = 3761.2093 kcal/mol (3750.3930 without restraints) Performing minimization step: 1108. Total energy = 3760.8141 kcal/mol (3750.0020 without restraints) Performing minimization step: 1109. Total energy = 3760.4199 kcal/mol (3749.6119 without restraints) Performing minimization step: 1110. Total energy = 3760.0260 kcal/mol (3749.2224 without restraints) Performing minimization step: 1111. Total energy = 3759.6330 kcal/mol (3748.8336 without restraints) Performing minimization step: 1112. Total energy = 3759.2396 kcal/mol (3748.4443 without restraints) Performing minimization step: 1113. Total energy = 3758.8474 kcal/mol (3748.0563 without restraints) Performing minimization step: 1114. Total energy = 3758.4556 kcal/mol (3747.6687 without restraints) Performing minimization step: 1115. Total energy = 3758.0642 kcal/mol (3747.2816 without restraints) Performing minimization step: 1116. Total energy = 3757.6736 kcal/mol (3746.8951 without restraints) Performing minimization step: 1117. Total energy = 3757.2835 kcal/mol (3746.5092 without restraints) Performing minimization step: 1118. Total energy = 3756.8937 kcal/mol (3746.1236 without restraints) Performing minimization step: 1119. Total energy = 3756.5049 kcal/mol (3745.7392 without restraints) Performing minimization step: 1120. Total energy = 3756.1167 kcal/mol (3745.3550 without restraints) Performing minimization step: 1121. Total energy = 3755.7284 kcal/mol (3744.9709 without restraints) Performing minimization step: 1122. Total energy = 3755.3408 kcal/mol (3744.5875 without restraints) Performing minimization step: 1123. Total energy = 3754.9542 kcal/mol (3744.2050 without restraints) Performing minimization step: 1124. Total energy = 3754.5673 kcal/mol (3743.8221 without restraints) Performing minimization step: 1125. Total energy = 3754.1814 kcal/mol (3743.4406 without restraints) Performing minimization step: 1126. Total energy = 3753.7961 kcal/mol (3743.0593 without restraints) Performing minimization step: 1127. Total energy = 3753.4116 kcal/mol (3742.6791 without restraints) Performing minimization step: 1128. Total energy = 3753.0272 kcal/mol (3742.2988 without restraints) Performing minimization step: 1129. Total energy = 3752.6436 kcal/mol (3741.9194 without restraints) Performing minimization step: 1130. Total energy = 3752.2607 kcal/mol (3741.5406 without restraints) Performing minimization step: 1131. Total energy = 3751.8780 kcal/mol (3741.1620 without restraints) Performing minimization step: 1132. Total energy = 3751.4959 kcal/mol (3740.7840 without restraints) Performing minimization step: 1133. Total energy = 3751.1140 kcal/mol (3740.4063 without restraints) Performing minimization step: 1134. Total energy = 3750.7330 kcal/mol (3740.0294 without restraints) Performing minimization step: 1135. Total energy = 3750.3520 kcal/mol (3739.6524 without restraints) Performing minimization step: 1136. Total energy = 3749.9721 kcal/mol (3739.2768 without restraints) Performing minimization step: 1137. Total energy = 3749.5925 kcal/mol (3738.9012 without restraints) Performing minimization step: 1138. Total energy = 3749.2132 kcal/mol (3738.5260 without restraints) Performing minimization step: 1139. Total energy = 3748.8344 kcal/mol (3738.1513 without restraints) Performing minimization step: 1140. Total energy = 3748.4563 kcal/mol (3737.7773 without restraints) Performing minimization step: 1141. Total energy = 3748.0789 kcal/mol (3737.4041 without restraints) Performing minimization step: 1142. Total energy = 3747.7018 kcal/mol (3737.0310 without restraints) Performing minimization step: 1143. Total energy = 3747.3249 kcal/mol (3736.6581 without restraints) Performing minimization step: 1144. Total energy = 3746.9486 kcal/mol (3736.2861 without restraints) Performing minimization step: 1145. Total energy = 3746.5730 kcal/mol (3735.9145 without restraints) Performing minimization step: 1146. Total energy = 3746.1975 kcal/mol (3735.5431 without restraints) Performing minimization step: 1147. Total energy = 3745.8229 kcal/mol (3735.1726 without restraints) Performing minimization step: 1148. Total energy = 3745.4490 kcal/mol (3734.8027 without restraints) Performing minimization step: 1149. Total energy = 3745.0749 kcal/mol (3734.4327 without restraints) Performing minimization step: 1150. Total energy = 3744.7013 kcal/mol (3734.0630 without restraints) Performing minimization step: 1151. Total energy = 3744.3282 kcal/mol (3733.6941 without restraints) Performing minimization step: 1152. Total energy = 3743.9561 kcal/mol (3733.3260 without restraints) Performing minimization step: 1153. Total energy = 3743.5836 kcal/mol (3732.9576 without restraints) Performing minimization step: 1154. Total energy = 3743.2123 kcal/mol (3732.5904 without restraints) Performing minimization step: 1155. Total energy = 3742.8415 kcal/mol (3732.2236 without restraints) Performing minimization step: 1156. Total energy = 3742.4710 kcal/mol (3731.8572 without restraints) Performing minimization step: 1157. Total energy = 3742.1007 kcal/mol (3731.4909 without restraints) Performing minimization step: 1158. Total energy = 3741.7312 kcal/mol (3731.1254 without restraints) Performing minimization step: 1159. Total energy = 3741.3623 kcal/mol (3730.7607 without restraints) Performing minimization step: 1160. Total energy = 3740.9940 kcal/mol (3730.3963 without restraints) Performing minimization step: 1161. Total energy = 3740.6259 kcal/mol (3730.0323 without restraints) Performing minimization step: 1162. Total energy = 3740.2586 kcal/mol (3729.6689 without restraints) Performing minimization step: 1163. Total energy = 3739.8903 kcal/mol (3729.3046 without restraints) Performing minimization step: 1164. Total energy = 3739.5228 kcal/mol (3728.9412 without restraints) Performing minimization step: 1165. Total energy = 3739.1563 kcal/mol (3728.5787 without restraints) Performing minimization step: 1166. Total energy = 3738.7905 kcal/mol (3728.2169 without restraints) Performing minimization step: 1167. Total energy = 3738.4254 kcal/mol (3727.8557 without restraints) Performing minimization step: 1168. Total energy = 3738.0605 kcal/mol (3727.4949 without restraints) Performing minimization step: 1169. Total energy = 3737.6963 kcal/mol (3727.1348 without restraints) Performing minimization step: 1170. Total energy = 3737.3323 kcal/mol (3726.7746 without restraints) Performing minimization step: 1171. Total energy = 3736.9689 kcal/mol (3726.4153 without restraints) Performing minimization step: 1172. Total energy = 3736.6059 kcal/mol (3726.0563 without restraints) Performing minimization step: 1173. Total energy = 3736.2435 kcal/mol (3725.6978 without restraints) Performing minimization step: 1174. Total energy = 3735.8806 kcal/mol (3725.3388 without restraints) Performing minimization step: 1175. Total energy = 3735.5187 kcal/mol (3724.9811 without restraints) Performing minimization step: 1176. Total energy = 3735.1575 kcal/mol (3724.6238 without restraints) Performing minimization step: 1177. Total energy = 3734.7962 kcal/mol (3724.2664 without restraints) Performing minimization step: 1178. Total energy = 3734.4356 kcal/mol (3723.9098 without restraints) Performing minimization step: 1179. Total energy = 3734.0754 kcal/mol (3723.5535 without restraints) Performing minimization step: 1180. Total energy = 3733.7162 kcal/mol (3723.1982 without restraints) Performing minimization step: 1181. Total energy = 3733.3568 kcal/mol (3722.8428 without restraints) Performing minimization step: 1182. Total energy = 3732.9982 kcal/mol (3722.4882 without restraints) Performing minimization step: 1183. Total energy = 3732.6402 kcal/mol (3722.1341 without restraints) Performing minimization step: 1184. Total energy = 3732.2823 kcal/mol (3721.7801 without restraints) Performing minimization step: 1185. Total energy = 3731.9251 kcal/mol (3721.4270 without restraints) Performing minimization step: 1186. Total energy = 3731.5688 kcal/mol (3721.0745 without restraints) Performing minimization step: 1187. Total energy = 3731.2122 kcal/mol (3720.7218 without restraints) Performing minimization step: 1188. Total energy = 3730.8563 kcal/mol (3720.3699 without restraints) Performing minimization step: 1189. Total energy = 3730.5008 kcal/mol (3720.0183 without restraints) Performing minimization step: 1190. Total energy = 3730.1459 kcal/mol (3719.6672 without restraints) Performing minimization step: 1191. Total energy = 3729.7911 kcal/mol (3719.3164 without restraints) Performing minimization step: 1192. Total energy = 3729.4360 kcal/mol (3718.9648 without restraints) Performing minimization step: 1193. Total energy = 3729.0817 kcal/mol (3718.6151 without restraints) Performing minimization step: 1194. Total energy = 3728.7285 kcal/mol (3718.2655 without restraints) Performing minimization step: 1195. Total energy = 3728.3754 kcal/mol (3717.9163 without restraints) Performing minimization step: 1196. Total energy = 3728.0222 kcal/mol (3717.5668 without restraints) Performing minimization step: 1197. Total energy = 3727.6690 kcal/mol (3717.2177 without restraints) Performing minimization step: 1198. Total energy = 3727.3172 kcal/mol (3716.8698 without restraints) Performing minimization step: 1199. Total energy = 3726.9664 kcal/mol (3716.5229 without restraints) Performing minimization step: 1200. Total energy = 3726.6158 kcal/mol (3716.1762 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e0aaf9ce/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 1201. Total energy = 3726.2650 kcal/mol (3715.8292 without restraints) Performing minimization step: 1202. Total energy = 3725.9148 kcal/mol (3715.4830 without restraints) Performing minimization step: 1203. Total energy = 3725.5647 kcal/mol (3715.1366 without restraints) Performing minimization step: 1204. Total energy = 3725.2153 kcal/mol (3714.7912 without restraints) Performing minimization step: 1205. Total energy = 3724.8664 kcal/mol (3714.4461 without restraints) Performing minimization step: 1206. Total energy = 3724.5180 kcal/mol (3714.1017 without restraints) Performing minimization step: 1207. Total energy = 3724.1703 kcal/mol (3713.7576 without restraints) Performing minimization step: 1208. Total energy = 3723.8226 kcal/mol (3713.4140 without restraints) Performing minimization step: 1209. Total energy = 3723.4753 kcal/mol (3713.0705 without restraints) Performing minimization step: 1210. Total energy = 3723.1289 kcal/mol (3712.7279 without restraints) Performing minimization step: 1211. Total energy = 3722.7825 kcal/mol (3712.3854 without restraints) Performing minimization step: 1212. Total energy = 3722.4362 kcal/mol (3712.0429 without restraints) Performing minimization step: 1213. Total energy = 3722.0906 kcal/mol (3711.7011 without restraints) Performing minimization step: 1214. Total energy = 3721.7451 kcal/mol (3711.3595 without restraints) Performing minimization step: 1215. Total energy = 3721.4002 kcal/mol (3711.0183 without restraints) Performing minimization step: 1216. Total energy = 3721.0556 kcal/mol (3710.6777 without restraints) Performing minimization step: 1217. Total energy = 3720.7115 kcal/mol (3710.3373 without restraints) Performing minimization step: 1218. Total energy = 3720.3676 kcal/mol (3709.9973 without restraints) Performing minimization step: 1219. Total energy = 3720.0241 kcal/mol (3709.6576 without restraints) Performing minimization step: 1220. Total energy = 3719.6807 kcal/mol (3709.3179 without restraints) Performing minimization step: 1221. Total energy = 3719.3381 kcal/mol (3708.9793 without restraints) Performing minimization step: 1222. Total energy = 3718.9966 kcal/mol (3708.6416 without restraints) Performing minimization step: 1223. Total energy = 3718.6550 kcal/mol (3708.3037 without restraints) Performing minimization step: 1224. Total energy = 3718.3136 kcal/mol (3707.9661 without restraints) Performing minimization step: 1225. Total energy = 3717.9721 kcal/mol (3707.6283 without restraints) Performing minimization step: 1226. Total energy = 3717.6319 kcal/mol (3707.2921 without restraints) Performing minimization step: 1227. Total energy = 3717.2920 kcal/mol (3706.9560 without restraints) Performing minimization step: 1228. Total energy = 3716.9519 kcal/mol (3706.6198 without restraints) Performing minimization step: 1229. Total energy = 3716.6128 kcal/mol (3706.2844 without restraints) Performing minimization step: 1230. Total energy = 3716.2736 kcal/mol (3705.9489 without restraints) Performing minimization step: 1231. Total energy = 3715.9347 kcal/mol (3705.6138 without restraints) Performing minimization step: 1232. Total energy = 3715.5963 kcal/mol (3705.2791 without restraints) Performing minimization step: 1233. Total energy = 3715.2581 kcal/mol (3704.9447 without restraints) Performing minimization step: 1234. Total energy = 3714.9206 kcal/mol (3704.6109 without restraints) Performing minimization step: 1235. Total energy = 3714.5829 kcal/mol (3704.2770 without restraints) Performing minimization step: 1236. Total energy = 3714.2467 kcal/mol (3703.9446 without restraints) Performing minimization step: 1237. Total energy = 3713.9102 kcal/mol (3703.6117 without restraints) Performing minimization step: 1238. Total energy = 3713.5741 kcal/mol (3703.2794 without restraints) Performing minimization step: 1239. Total energy = 3713.2381 kcal/mol (3702.9473 without restraints) Performing minimization step: 1240. Total energy = 3712.9029 kcal/mol (3702.6157 without restraints) Performing minimization step: 1241. Total energy = 3712.5676 kcal/mol (3702.2843 without restraints) Performing minimization step: 1242. Total energy = 3712.2331 kcal/mol (3701.9535 without restraints) Performing minimization step: 1243. Total energy = 3711.8982 kcal/mol (3701.6219 without restraints) Performing minimization step: 1244. Total energy = 3711.5641 kcal/mol (3701.2918 without restraints) Performing minimization step: 1245. Total energy = 3711.2306 kcal/mol (3700.9622 without restraints) Performing minimization step: 1246. Total energy = 3710.8976 kcal/mol (3700.6329 without restraints) Performing minimization step: 1247. Total energy = 3710.5648 kcal/mol (3700.3037 without restraints) Performing minimization step: 1248. Total energy = 3710.2317 kcal/mol (3699.9744 without restraints) Performing minimization step: 1249. Total energy = 3709.8998 kcal/mol (3699.6463 without restraints) Performing minimization step: 1250. Total energy = 3709.5681 kcal/mol (3699.3183 without restraints) Performing minimization step: 1251. Total energy = 3709.2368 kcal/mol (3698.9906 without restraints) Performing minimization step: 1252. Total energy = 3708.9050 kcal/mol (3698.6625 without restraints) Performing minimization step: 1253. Total energy = 3708.5744 kcal/mol (3698.3357 without restraints) Performing minimization step: 1254. Total energy = 3708.2441 kcal/mol (3698.0092 without restraints) Performing minimization step: 1255. Total energy = 3707.9144 kcal/mol (3697.6830 without restraints) Performing minimization step: 1256. Total energy = 3707.5850 kcal/mol (3697.3574 without restraints) Performing minimization step: 1257. Total energy = 3707.2560 kcal/mol (3697.0324 without restraints) Performing minimization step: 1258. Total energy = 3706.9273 kcal/mol (3696.7070 without restraints) Performing minimization step: 1259. Total energy = 3706.5988 kcal/mol (3696.3822 without restraints) Performing minimization step: 1260. Total energy = 3706.2715 kcal/mol (3696.0588 without restraints) Performing minimization step: 1261. Total energy = 3705.9436 kcal/mol (3695.7344 without restraints) Performing minimization step: 1262. Total energy = 3705.6157 kcal/mol (3695.4101 without restraints) Performing minimization step: 1263. Total energy = 3705.2881 kcal/mol (3695.0862 without restraints) Performing minimization step: 1264. Total energy = 3704.9610 kcal/mol (3694.7629 without restraints) Performing minimization step: 1265. Total energy = 3704.6345 kcal/mol (3694.4402 without restraints) Performing minimization step: 1266. Total energy = 3704.3084 kcal/mol (3694.1175 without restraints) Performing minimization step: 1267. Total energy = 3703.9826 kcal/mol (3693.7955 without restraints) Performing minimization step: 1268. Total energy = 3703.6576 kcal/mol (3693.4743 without restraints) Performing minimization step: 1269. Total energy = 3703.3329 kcal/mol (3693.1532 without restraints) Performing minimization step: 1270. Total energy = 3703.0081 kcal/mol (3692.8321 without restraints) Performing minimization step: 1271. Total energy = 3702.6838 kcal/mol (3692.5112 without restraints) Performing minimization step: 1272. Total energy = 3702.3594 kcal/mol (3692.1905 without restraints) Performing minimization step: 1273. Total energy = 3702.0360 kcal/mol (3691.8707 without restraints) Performing minimization step: 1274. Total energy = 3701.7123 kcal/mol (3691.5506 without restraints) Performing minimization step: 1275. Total energy = 3701.3894 kcal/mol (3691.2314 without restraints) Performing minimization step: 1276. Total energy = 3701.0668 kcal/mol (3690.9124 without restraints) Performing minimization step: 1277. Total energy = 3700.7446 kcal/mol (3690.5938 without restraints) Performing minimization step: 1278. Total energy = 3700.4224 kcal/mol (3690.2753 without restraints) Performing minimization step: 1279. Total energy = 3700.1005 kcal/mol (3689.9569 without restraints) Performing minimization step: 1280. Total energy = 3699.7791 kcal/mol (3689.6391 without restraints) Performing minimization step: 1281. Total energy = 3699.4579 kcal/mol (3689.3217 without restraints) Performing minimization step: 1282. Total energy = 3699.1370 kcal/mol (3689.0043 without restraints) Performing minimization step: 1283. Total energy = 3698.8165 kcal/mol (3688.6875 without restraints) Performing minimization step: 1284. Total energy = 3698.4966 kcal/mol (3688.3714 without restraints) Performing minimization step: 1285. Total energy = 3698.1772 kcal/mol (3688.0555 without restraints) Performing minimization step: 1286. Total energy = 3697.8581 kcal/mol (3687.7399 without restraints) Performing minimization step: 1287. Total energy = 3697.5391 kcal/mol (3687.4244 without restraints) Performing minimization step: 1288. Total energy = 3697.2204 kcal/mol (3687.1094 without restraints) Performing minimization step: 1289. Total energy = 3696.9021 kcal/mol (3686.7949 without restraints) Performing minimization step: 1290. Total energy = 3696.5844 kcal/mol (3686.4805 without restraints) Performing minimization step: 1291. Total energy = 3696.2670 kcal/mol (3686.1670 without restraints) Performing minimization step: 1292. Total energy = 3695.9498 kcal/mol (3685.8531 without restraints) Performing minimization step: 1293. Total energy = 3695.6323 kcal/mol (3685.5391 without restraints) Performing minimization step: 1294. Total energy = 3695.3153 kcal/mol (3685.2258 without restraints) Performing minimization step: 1295. Total energy = 3694.9985 kcal/mol (3684.9126 without restraints) Performing minimization step: 1296. Total energy = 3694.6823 kcal/mol (3684.6000 without restraints) Performing minimization step: 1297. Total energy = 3694.3664 kcal/mol (3684.2875 without restraints) Performing minimization step: 1298. Total energy = 3694.0506 kcal/mol (3683.9754 without restraints) Performing minimization step: 1299. Total energy = 3693.7353 kcal/mol (3683.6637 without restraints) Performing minimization step: 1300. Total energy = 3693.4205 kcal/mol (3683.3525 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e0aaf9ce/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 1301. Total energy = 3693.1061 kcal/mol (3683.0416 without restraints) Performing minimization step: 1302. Total energy = 3692.7921 kcal/mol (3682.7311 without restraints) Performing minimization step: 1303. Total energy = 3692.4786 kcal/mol (3682.4213 without restraints) Performing minimization step: 1304. Total energy = 3692.1650 kcal/mol (3682.1111 without restraints) Performing minimization step: 1305. Total energy = 3691.8520 kcal/mol (3681.8017 without restraints) Performing minimization step: 1306. Total energy = 3691.5387 kcal/mol (3681.4920 without restraints) Performing minimization step: 1307. Total energy = 3691.2264 kcal/mol (3681.1832 without restraints) Performing minimization step: 1308. Total energy = 3690.9141 kcal/mol (3680.8746 without restraints) Performing minimization step: 1309. Total energy = 3690.6024 kcal/mol (3680.5663 without restraints) Performing minimization step: 1310. Total energy = 3690.2907 kcal/mol (3680.2581 without restraints) Performing minimization step: 1311. Total energy = 3689.9791 kcal/mol (3679.9500 without restraints) Performing minimization step: 1312. Total energy = 3689.6679 kcal/mol (3679.6424 without restraints) Performing minimization step: 1313. Total energy = 3689.3568 kcal/mol (3679.3347 without restraints) Performing minimization step: 1314. Total energy = 3689.0461 kcal/mol (3679.0276 without restraints) Performing minimization step: 1315. Total energy = 3688.7360 kcal/mol (3678.7210 without restraints) Performing minimization step: 1316. Total energy = 3688.4261 kcal/mol (3678.4146 without restraints) Performing minimization step: 1317. Total energy = 3688.1166 kcal/mol (3678.1084 without restraints) Performing minimization step: 1318. Total energy = 3687.8068 kcal/mol (3677.8023 without restraints) Performing minimization step: 1319. Total energy = 3687.4976 kcal/mol (3677.4966 without restraints) Performing minimization step: 1320. Total energy = 3687.1889 kcal/mol (3677.1915 without restraints) Performing minimization step: 1321. Total energy = 3686.8807 kcal/mol (3676.8867 without restraints) Performing minimization step: 1322. Total energy = 3686.5726 kcal/mol (3676.5822 without restraints) Performing minimization step: 1323. Total energy = 3686.2649 kcal/mol (3676.2780 without restraints) Performing minimization step: 1324. Total energy = 3685.9582 kcal/mol (3675.9748 without restraints) Performing minimization step: 1325. Total energy = 3685.6516 kcal/mol (3675.6717 without restraints) Performing minimization step: 1326. Total energy = 3685.3449 kcal/mol (3675.3684 without restraints) Performing minimization step: 1327. Total energy = 3685.0391 kcal/mol (3675.0661 without restraints) Performing minimization step: 1328. Total energy = 3684.7329 kcal/mol (3674.7633 without restraints) Performing minimization step: 1329. Total energy = 3684.4269 kcal/mol (3674.4607 without restraints) Performing minimization step: 1330. Total energy = 3684.1215 kcal/mol (3674.1592 without restraints) Performing minimization step: 1331. Total energy = 3683.8163 kcal/mol (3673.8572 without restraints) Performing minimization step: 1332. Total energy = 3683.5115 kcal/mol (3673.5559 without restraints) Performing minimization step: 1333. Total energy = 3683.2067 kcal/mol (3673.2546 without restraints) Performing minimization step: 1334. Total energy = 3682.9026 kcal/mol (3672.9539 without restraints) Performing minimization step: 1335. Total energy = 3682.5982 kcal/mol (3672.6530 without restraints) Performing minimization step: 1336. Total energy = 3682.2942 kcal/mol (3672.3523 without restraints) Performing minimization step: 1337. Total energy = 3681.9908 kcal/mol (3672.0525 without restraints) Performing minimization step: 1338. Total energy = 3681.6872 kcal/mol (3671.7524 without restraints) Performing minimization step: 1339. Total energy = 3681.3845 kcal/mol (3671.4531 without restraints) Performing minimization step: 1340. Total energy = 3681.0817 kcal/mol (3671.1539 without restraints) Performing minimization step: 1341. Total energy = 3680.7793 kcal/mol (3670.8548 without restraints) Performing minimization step: 1342. Total energy = 3680.4768 kcal/mol (3670.5557 without restraints) Performing minimization step: 1343. Total energy = 3680.1752 kcal/mol (3670.2575 without restraints) Performing minimization step: 1344. Total energy = 3679.8734 kcal/mol (3669.9591 without restraints) Performing minimization step: 1345. Total energy = 3679.5720 kcal/mol (3669.6613 without restraints) Performing minimization step: 1346. Total energy = 3679.2710 kcal/mol (3669.3637 without restraints) Performing minimization step: 1347. Total energy = 3678.9701 kcal/mol (3669.0662 without restraints) Performing minimization step: 1348. Total energy = 3678.6694 kcal/mol (3668.7689 without restraints) Performing minimization step: 1349. Total energy = 3678.3687 kcal/mol (3668.4715 without restraints) Performing minimization step: 1350. Total energy = 3678.0686 kcal/mol (3668.1750 without restraints) Performing minimization step: 1351. Total energy = 3677.7689 kcal/mol (3667.8787 without restraints) Performing minimization step: 1352. Total energy = 3677.4688 kcal/mol (3667.5821 without restraints) Performing minimization step: 1353. Total energy = 3677.1700 kcal/mol (3667.2866 without restraints) Performing minimization step: 1354. Total energy = 3676.8714 kcal/mol (3666.9914 without restraints) Performing minimization step: 1355. Total energy = 3676.5725 kcal/mol (3666.6956 without restraints) Performing minimization step: 1356. Total energy = 3676.2740 kcal/mol (3666.4006 without restraints) Performing minimization step: 1357. Total energy = 3675.9759 kcal/mol (3666.1062 without restraints) Performing minimization step: 1358. Total energy = 3675.6784 kcal/mol (3665.8120 without restraints) Performing minimization step: 1359. Total energy = 3675.3811 kcal/mol (3665.5181 without restraints) Performing minimization step: 1360. Total energy = 3675.0835 kcal/mol (3665.2239 without restraints) Performing minimization step: 1361. Total energy = 3674.7863 kcal/mol (3664.9301 without restraints) Performing minimization step: 1362. Total energy = 3674.4905 kcal/mol (3664.6377 without restraints) Performing minimization step: 1363. Total energy = 3674.1943 kcal/mol (3664.3449 without restraints) Performing minimization step: 1364. Total energy = 3673.8983 kcal/mol (3664.0522 without restraints) Performing minimization step: 1365. Total energy = 3673.6023 kcal/mol (3663.7597 without restraints) Performing minimization step: 1366. Total energy = 3673.3070 kcal/mol (3663.4678 without restraints) Performing minimization step: 1367. Total energy = 3673.0120 kcal/mol (3663.1761 without restraints) Performing minimization step: 1368. Total energy = 3672.7169 kcal/mol (3662.8843 without restraints) Performing minimization step: 1369. Total energy = 3672.4225 kcal/mol (3662.5934 without restraints) Performing minimization step: 1370. Total energy = 3672.1286 kcal/mol (3662.3029 without restraints) Performing minimization step: 1371. Total energy = 3671.8347 kcal/mol (3662.0123 without restraints) Performing minimization step: 1372. Total energy = 3671.5408 kcal/mol (3661.7218 without restraints) Performing minimization step: 1373. Total energy = 3671.2472 kcal/mol (3661.4316 without restraints) Performing minimization step: 1374. Total energy = 3670.9541 kcal/mol (3661.1416 without restraints) Performing minimization step: 1375. Total energy = 3670.6608 kcal/mol (3660.8519 without restraints) Performing minimization step: 1376. Total energy = 3670.3677 kcal/mol (3660.5622 without restraints) Performing minimization step: 1377. Total energy = 3670.0756 kcal/mol (3660.2734 without restraints) Performing minimization step: 1378. Total energy = 3669.7836 kcal/mol (3659.9849 without restraints) Performing minimization step: 1379. Total energy = 3669.4922 kcal/mol (3659.6967 without restraints) Performing minimization step: 1380. Total energy = 3669.2004 kcal/mol (3659.4083 without restraints) Performing minimization step: 1381. Total energy = 3668.9091 kcal/mol (3659.1203 without restraints) Performing minimization step: 1382. Total energy = 3668.6179 kcal/mol (3658.8323 without restraints) Performing minimization step: 1383. Total energy = 3668.3271 kcal/mol (3658.5451 without restraints) Performing minimization step: 1384. Total energy = 3668.0365 kcal/mol (3658.2577 without restraints) Performing minimization step: 1385. Total energy = 3667.7463 kcal/mol (3657.9708 without restraints) Performing minimization step: 1386. Total energy = 3667.4563 kcal/mol (3657.6842 without restraints) Performing minimization step: 1387. Total energy = 3667.1668 kcal/mol (3657.3980 without restraints) Performing minimization step: 1388. Total energy = 3666.8774 kcal/mol (3657.1119 without restraints) Performing minimization step: 1389. Total energy = 3666.5883 kcal/mol (3656.8261 without restraints) Performing minimization step: 1390. Total energy = 3666.2994 kcal/mol (3656.5406 without restraints) Performing minimization step: 1391. Total energy = 3666.0106 kcal/mol (3656.2550 without restraints) Performing minimization step: 1392. Total energy = 3665.7222 kcal/mol (3655.9701 without restraints) Performing minimization step: 1393. Total energy = 3665.4342 kcal/mol (3655.6853 without restraints) Performing minimization step: 1394. Total energy = 3665.1461 kcal/mol (3655.4004 without restraints) Performing minimization step: 1395. Total energy = 3664.8583 kcal/mol (3655.1160 without restraints) Performing minimization step: 1396. Total energy = 3664.5710 kcal/mol (3654.8320 without restraints) Performing minimization step: 1397. Total energy = 3664.2836 kcal/mol (3654.5479 without restraints) Performing minimization step: 1398. Total energy = 3663.9962 kcal/mol (3654.2640 without restraints) Performing minimization step: 1399. Total energy = 3663.7099 kcal/mol (3653.9809 without restraints) Performing minimization step: 1400. Total energy = 3663.4236 kcal/mol (3653.6978 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e0aaf9ce/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 1401. Total energy = 3663.1375 kcal/mol (3653.4149 without restraints) Performing minimization step: 1402. Total energy = 3662.8510 kcal/mol (3653.1319 without restraints) Performing minimization step: 1403. Total energy = 3662.5656 kcal/mol (3652.8497 without restraints) Performing minimization step: 1404. Total energy = 3662.2803 kcal/mol (3652.5676 without restraints) Performing minimization step: 1405. Total energy = 3661.9958 kcal/mol (3652.2864 without restraints) Performing minimization step: 1406. Total energy = 3661.7105 kcal/mol (3652.0044 without restraints) Performing minimization step: 1407. Total energy = 3661.4252 kcal/mol (3651.7225 without restraints) Performing minimization step: 1408. Total energy = 3661.1409 kcal/mol (3651.4414 without restraints) Performing minimization step: 1409. Total energy = 3660.8561 kcal/mol (3651.1598 without restraints) Performing minimization step: 1410. Total energy = 3660.5723 kcal/mol (3650.8792 without restraints) Performing minimization step: 1411. Total energy = 3660.2883 kcal/mol (3650.5986 without restraints) Performing minimization step: 1412. Total energy = 3660.0047 kcal/mol (3650.3183 without restraints) Performing minimization step: 1413. Total energy = 3659.7213 kcal/mol (3650.0380 without restraints) Performing minimization step: 1414. Total energy = 3659.4381 kcal/mol (3649.7582 without restraints) Performing minimization step: 1415. Total energy = 3659.1552 kcal/mol (3649.4786 without restraints) Performing minimization step: 1416. Total energy = 3658.8725 kcal/mol (3649.1991 without restraints) Performing minimization step: 1417. Total energy = 3658.5903 kcal/mol (3648.9202 without restraints) Performing minimization step: 1418. Total energy = 3658.3083 kcal/mol (3648.6414 without restraints) Performing minimization step: 1419. Total energy = 3658.0267 kcal/mol (3648.3631 without restraints) Performing minimization step: 1420. Total energy = 3657.7457 kcal/mol (3648.0854 without restraints) Performing minimization step: 1421. Total energy = 3657.4641 kcal/mol (3647.8069 without restraints) Performing minimization step: 1422. Total energy = 3657.1827 kcal/mol (3647.5289 without restraints) Performing minimization step: 1423. Total energy = 3656.9020 kcal/mol (3647.2514 without restraints) Performing minimization step: 1424. Total energy = 3656.6218 kcal/mol (3646.9745 without restraints) Performing minimization step: 1425. Total energy = 3656.3415 kcal/mol (3646.6973 without restraints) Performing minimization step: 1426. Total energy = 3656.0612 kcal/mol (3646.4203 without restraints) Performing minimization step: 1427. Total energy = 3655.7819 kcal/mol (3646.1442 without restraints) Performing minimization step: 1428. Total energy = 3655.5023 kcal/mol (3645.8679 without restraints) Performing minimization step: 1429. Total energy = 3655.2231 kcal/mol (3645.5919 without restraints) Performing minimization step: 1430. Total energy = 3654.9434 kcal/mol (3645.3154 without restraints) Performing minimization step: 1431. Total energy = 3654.6650 kcal/mol (3645.0402 without restraints) Performing minimization step: 1432. Total energy = 3654.3863 kcal/mol (3644.7648 without restraints) Performing minimization step: 1433. Total energy = 3654.1082 kcal/mol (3644.4901 without restraints) Performing minimization step: 1434. Total energy = 3653.8306 kcal/mol (3644.2155 without restraints) Performing minimization step: 1435. Total energy = 3653.5529 kcal/mol (3643.9412 without restraints) Performing minimization step: 1436. Total energy = 3653.2756 kcal/mol (3643.6670 without restraints) Performing minimization step: 1437. Total energy = 3652.9977 kcal/mol (3643.3922 without restraints) Performing minimization step: 1438. Total energy = 3652.7203 kcal/mol (3643.1180 without restraints) Performing minimization step: 1439. Total energy = 3652.4434 kcal/mol (3642.8444 without restraints) Performing minimization step: 1440. Total energy = 3652.1671 kcal/mol (3642.5714 without restraints) Performing minimization step: 1441. Total energy = 3651.8904 kcal/mol (3642.2979 without restraints) Performing minimization step: 1442. Total energy = 3651.6141 kcal/mol (3642.0247 without restraints) Performing minimization step: 1443. Total energy = 3651.3382 kcal/mol (3641.7519 without restraints) Performing minimization step: 1444. Total energy = 3651.0628 kcal/mol (3641.4797 without restraints) Performing minimization step: 1445. Total energy = 3650.7870 kcal/mol (3641.2071 without restraints) Performing minimization step: 1446. Total energy = 3650.5111 kcal/mol (3640.9345 without restraints) Performing minimization step: 1447. Total energy = 3650.2360 kcal/mol (3640.6626 without restraints) Performing minimization step: 1448. Total energy = 3649.9613 kcal/mol (3640.3911 without restraints) Performing minimization step: 1449. Total energy = 3649.6870 kcal/mol (3640.1202 without restraints) Performing minimization step: 1450. Total energy = 3649.4128 kcal/mol (3639.8489 without restraints) Performing minimization step: 1451. Total energy = 3649.1388 kcal/mol (3639.5781 without restraints) Performing minimization step: 1452. Total energy = 3648.8653 kcal/mol (3639.3078 without restraints) Performing minimization step: 1453. Total energy = 3648.5912 kcal/mol (3639.0369 without restraints) Performing minimization step: 1454. Total energy = 3648.3179 kcal/mol (3638.7668 without restraints) Performing minimization step: 1455. Total energy = 3648.0442 kcal/mol (3638.4962 without restraints) Performing minimization step: 1456. Total energy = 3647.7711 kcal/mol (3638.2264 without restraints) Performing minimization step: 1457. Total energy = 3647.4981 kcal/mol (3637.9564 without restraints) Performing minimization step: 1458. Total energy = 3647.2260 kcal/mol (3637.6878 without restraints) Performing minimization step: 1459. Total energy = 3646.9541 kcal/mol (3637.4188 without restraints) Performing minimization step: 1460. Total energy = 3646.6824 kcal/mol (3637.1503 without restraints) Performing minimization step: 1461. Total energy = 3646.4102 kcal/mol (3636.8812 without restraints) Performing minimization step: 1462. Total energy = 3646.1383 kcal/mol (3636.6126 without restraints) Performing minimization step: 1463. Total energy = 3645.8675 kcal/mol (3636.3448 without restraints) Performing minimization step: 1464. Total energy = 3645.5959 kcal/mol (3636.0763 without restraints) Performing minimization step: 1465. Total energy = 3645.3250 kcal/mol (3635.8086 without restraints) Performing minimization step: 1466. Total energy = 3645.0546 kcal/mol (3635.5414 without restraints) Performing minimization step: 1467. Total energy = 3644.7843 kcal/mol (3635.2742 without restraints) Performing minimization step: 1468. Total energy = 3644.5138 kcal/mol (3635.0068 without restraints) Performing minimization step: 1469. Total energy = 3644.2434 kcal/mol (3634.7395 without restraints) Performing minimization step: 1470. Total energy = 3643.9732 kcal/mol (3634.4725 without restraints) Performing minimization step: 1471. Total energy = 3643.7027 kcal/mol (3634.2052 without restraints) Performing minimization step: 1472. Total energy = 3643.4339 kcal/mol (3633.9396 without restraints) Performing minimization step: 1473. Total energy = 3643.1644 kcal/mol (3633.6730 without restraints) Performing minimization step: 1474. Total energy = 3642.8949 kcal/mol (3633.4066 without restraints) Performing minimization step: 1475. Total energy = 3642.6260 kcal/mol (3633.1410 without restraints) Performing minimization step: 1476. Total energy = 3642.3569 kcal/mol (3632.8750 without restraints) Performing minimization step: 1477. Total energy = 3642.0886 kcal/mol (3632.6098 without restraints) Performing minimization step: 1478. Total energy = 3641.8203 kcal/mol (3632.3448 without restraints) Performing minimization step: 1479. Total energy = 3641.5525 kcal/mol (3632.0800 without restraints) Performing minimization step: 1480. Total energy = 3641.2849 kcal/mol (3631.8157 without restraints) Performing minimization step: 1481. Total energy = 3641.0174 kcal/mol (3631.5511 without restraints) Performing minimization step: 1482. Total energy = 3640.7498 kcal/mol (3631.2864 without restraints) Performing minimization step: 1483. Total energy = 3640.4825 kcal/mol (3631.0226 without restraints) Performing minimization step: 1484. Total energy = 3640.2155 kcal/mol (3630.7587 without restraints) Performing minimization step: 1485. Total energy = 3639.9489 kcal/mol (3630.4952 without restraints) Performing minimization step: 1486. Total energy = 3639.6829 kcal/mol (3630.2323 without restraints) Performing minimization step: 1487. Total energy = 3639.4165 kcal/mol (3629.9690 without restraints) Performing minimization step: 1488. Total energy = 3639.1503 kcal/mol (3629.7059 without restraints) Performing minimization step: 1489. Total energy = 3638.8851 kcal/mol (3629.4438 without restraints) Performing minimization step: 1490. Total energy = 3638.6198 kcal/mol (3629.1816 without restraints) Performing minimization step: 1491. Total energy = 3638.3548 kcal/mol (3628.9198 without restraints) Performing minimization step: 1492. Total energy = 3638.0898 kcal/mol (3628.6579 without restraints) Performing minimization step: 1493. Total energy = 3637.8256 kcal/mol (3628.3967 without restraints) Performing minimization step: 1494. Total energy = 3637.5613 kcal/mol (3628.1356 without restraints) Performing minimization step: 1495. Total energy = 3637.2973 kcal/mol (3627.8747 without restraints) Performing minimization step: 1496. Total energy = 3637.0330 kcal/mol (3627.6134 without restraints) Performing minimization step: 1497. Total energy = 3636.7690 kcal/mol (3627.3525 without restraints) Performing minimization step: 1498. Total energy = 3636.5053 kcal/mol (3627.0919 without restraints) Performing minimization step: 1499. Total energy = 3636.2417 kcal/mol (3626.8313 without restraints) Performing minimization step: 1500. Total energy = 3635.9788 kcal/mol (3626.5719 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e0aaf9ce/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 1501. Total energy = 3635.7164 kcal/mol (3626.3123 without restraints) Performing minimization step: 1502. Total energy = 3635.4535 kcal/mol (3626.0524 without restraints) Performing minimization step: 1503. Total energy = 3635.1908 kcal/mol (3625.7928 without restraints) Performing minimization step: 1504. Total energy = 3634.9285 kcal/mol (3625.5336 without restraints) Performing minimization step: 1505. Total energy = 3634.6659 kcal/mol (3625.2741 without restraints) Performing minimization step: 1506. Total energy = 3634.4041 kcal/mol (3625.0153 without restraints) Performing minimization step: 1507. Total energy = 3634.1425 kcal/mol (3624.7568 without restraints) Performing minimization step: 1508. Total energy = 3633.8807 kcal/mol (3624.4979 without restraints) Performing minimization step: 1509. Total energy = 3633.6192 kcal/mol (3624.2396 without restraints) Performing minimization step: 1510. Total energy = 3633.3582 kcal/mol (3623.9817 without restraints) Performing minimization step: 1511. Total energy = 3633.0971 kcal/mol (3623.7237 without restraints) Performing minimization step: 1512. Total energy = 3632.8369 kcal/mol (3623.4665 without restraints) Performing minimization step: 1513. Total energy = 3632.5764 kcal/mol (3623.2091 without restraints) Performing minimization step: 1514. Total energy = 3632.3160 kcal/mol (3622.9516 without restraints) Performing minimization step: 1515. Total energy = 3632.0555 kcal/mol (3622.6944 without restraints) Performing minimization step: 1516. Total energy = 3631.7961 kcal/mol (3622.4378 without restraints) Performing minimization step: 1517. Total energy = 3631.5364 kcal/mol (3622.1813 without restraints) Performing minimization step: 1518. Total energy = 3631.2768 kcal/mol (3621.9248 without restraints) Performing minimization step: 1519. Total energy = 3631.0172 kcal/mol (3621.6682 without restraints) Performing minimization step: 1520. Total energy = 3630.7584 kcal/mol (3621.4124 without restraints) Performing minimization step: 1521. Total energy = 3630.4996 kcal/mol (3621.1566 without restraints) Performing minimization step: 1522. Total energy = 3630.2411 kcal/mol (3620.9012 without restraints) Performing minimization step: 1523. Total energy = 3629.9830 kcal/mol (3620.6462 without restraints) Performing minimization step: 1524. Total energy = 3629.7249 kcal/mol (3620.3912 without restraints) Performing minimization step: 1525. Total energy = 3629.4665 kcal/mol (3620.1357 without restraints) Performing minimization step: 1526. Total energy = 3629.2087 kcal/mol (3619.8810 without restraints) Performing minimization step: 1527. Total energy = 3628.9509 kcal/mol (3619.6261 without restraints) Performing minimization step: 1528. Total energy = 3628.6934 kcal/mol (3619.3717 without restraints) Performing minimization step: 1529. Total energy = 3628.4360 kcal/mol (3619.1173 without restraints) Performing minimization step: 1530. Total energy = 3628.1787 kcal/mol (3618.8631 without restraints) Performing minimization step: 1531. Total energy = 3627.9218 kcal/mol (3618.6093 without restraints) Performing minimization step: 1532. Total energy = 3627.6654 kcal/mol (3618.3559 without restraints) Performing minimization step: 1533. Total energy = 3627.4090 kcal/mol (3618.1025 without restraints) Performing minimization step: 1534. Total energy = 3627.1525 kcal/mol (3617.8491 without restraints) Performing minimization step: 1535. Total energy = 3626.8959 kcal/mol (3617.5954 without restraints) Performing minimization step: 1536. Total energy = 3626.6399 kcal/mol (3617.3425 without restraints) Performing minimization step: 1537. Total energy = 3626.3838 kcal/mol (3617.0893 without restraints) Performing minimization step: 1538. Total energy = 3626.1282 kcal/mol (3616.8368 without restraints) Performing minimization step: 1539. Total energy = 3625.8728 kcal/mol (3616.5844 without restraints) Performing minimization step: 1540. Total energy = 3625.6180 kcal/mol (3616.3326 without restraints) Performing minimization step: 1541. Total energy = 3625.3629 kcal/mol (3616.0805 without restraints) Performing minimization step: 1542. Total energy = 3625.1080 kcal/mol (3615.8286 without restraints) Performing minimization step: 1543. Total energy = 3624.8534 kcal/mol (3615.5769 without restraints) Performing minimization step: 1544. Total energy = 3624.5989 kcal/mol (3615.3255 without restraints) Performing minimization step: 1545. Total energy = 3624.3448 kcal/mol (3615.0742 without restraints) Performing minimization step: 1546. Total energy = 3624.0905 kcal/mol (3614.8230 without restraints) Performing minimization step: 1547. Total energy = 3623.8365 kcal/mol (3614.5722 without restraints) Performing minimization step: 1548. Total energy = 3623.5829 kcal/mol (3614.3215 without restraints) Performing minimization step: 1549. Total energy = 3623.3295 kcal/mol (3614.0709 without restraints) Performing minimization step: 1550. Total energy = 3623.0765 kcal/mol (3613.8211 without restraints) Performing minimization step: 1551. Total energy = 3622.8236 kcal/mol (3613.5712 without restraints) Performing minimization step: 1552. Total energy = 3622.5709 kcal/mol (3613.3215 without restraints) Performing minimization step: 1553. Total energy = 3622.3185 kcal/mol (3613.0720 without restraints) Performing minimization step: 1554. Total energy = 3622.0666 kcal/mol (3612.8232 without restraints) Performing minimization step: 1555. Total energy = 3621.8146 kcal/mol (3612.5742 without restraints) Performing minimization step: 1556. Total energy = 3621.5627 kcal/mol (3612.3252 without restraints) Performing minimization step: 1557. Total energy = 3621.3105 kcal/mol (3612.0760 without restraints) Performing minimization step: 1558. Total energy = 3621.0588 kcal/mol (3611.8274 without restraints) Performing minimization step: 1559. Total energy = 3620.8075 kcal/mol (3611.5789 without restraints) Performing minimization step: 1560. Total energy = 3620.5559 kcal/mol (3611.3304 without restraints) Performing minimization step: 1561. Total energy = 3620.3045 kcal/mol (3611.0819 without restraints) Performing minimization step: 1562. Total energy = 3620.0533 kcal/mol (3610.8336 without restraints) Performing minimization step: 1563. Total energy = 3619.8016 kcal/mol (3610.5851 without restraints) Performing minimization step: 1564. Total energy = 3619.5514 kcal/mol (3610.3377 without restraints) Performing minimization step: 1565. Total energy = 3619.3010 kcal/mol (3610.0902 without restraints) Performing minimization step: 1566. Total energy = 3619.0507 kcal/mol (3609.8430 without restraints) Performing minimization step: 1567. Total energy = 3618.8008 kcal/mol (3609.5960 without restraints) Performing minimization step: 1568. Total energy = 3618.5514 kcal/mol (3609.3496 without restraints) Performing minimization step: 1569. Total energy = 3618.3022 kcal/mol (3609.1035 without restraints) Performing minimization step: 1570. Total energy = 3618.0531 kcal/mol (3608.8572 without restraints) Performing minimization step: 1571. Total energy = 3617.8035 kcal/mol (3608.6106 without restraints) Performing minimization step: 1572. Total energy = 3617.5547 kcal/mol (3608.3646 without restraints) Performing minimization step: 1573. Total energy = 3617.3063 kcal/mol (3608.1194 without restraints) Performing minimization step: 1574. Total energy = 3617.0580 kcal/mol (3607.8739 without restraints) Performing minimization step: 1575. Total energy = 3616.8099 kcal/mol (3607.6288 without restraints) Performing minimization step: 1576. Total energy = 3616.5615 kcal/mol (3607.3835 without restraints) Performing minimization step: 1577. Total energy = 3616.3143 kcal/mol (3607.1390 without restraints) Performing minimization step: 1578. Total energy = 3616.0661 kcal/mol (3606.8938 without restraints) Performing minimization step: 1579. Total energy = 3615.8185 kcal/mol (3606.6491 without restraints) Performing minimization step: 1580. Total energy = 3615.5712 kcal/mol (3606.4050 without restraints) Performing minimization step: 1581. Total energy = 3615.3241 kcal/mol (3606.1606 without restraints) Performing minimization step: 1582. Total energy = 3615.0769 kcal/mol (3605.9164 without restraints) Performing minimization step: 1583. Total energy = 3614.8305 kcal/mol (3605.6729 without restraints) Performing minimization step: 1584. Total energy = 3614.5840 kcal/mol (3605.4295 without restraints) Performing minimization step: 1585. Total energy = 3614.3376 kcal/mol (3605.1859 without restraints) Performing minimization step: 1586. Total energy = 3614.0908 kcal/mol (3604.9420 without restraints) Performing minimization step: 1587. Total energy = 3613.8449 kcal/mol (3604.6991 without restraints) Performing minimization step: 1588. Total energy = 3613.5992 kcal/mol (3604.4564 without restraints) Performing minimization step: 1589. Total energy = 3613.3534 kcal/mol (3604.2135 without restraints) Performing minimization step: 1590. Total energy = 3613.1075 kcal/mol (3603.9705 without restraints) Performing minimization step: 1591. Total energy = 3612.8623 kcal/mol (3603.7282 without restraints) Performing minimization step: 1592. Total energy = 3612.6169 kcal/mol (3603.4858 without restraints) Performing minimization step: 1593. Total energy = 3612.3720 kcal/mol (3603.2438 without restraints) Performing minimization step: 1594. Total energy = 3612.1273 kcal/mol (3603.0020 without restraints) Performing minimization step: 1595. Total energy = 3611.8828 kcal/mol (3602.7604 without restraints) Performing minimization step: 1596. Total energy = 3611.6385 kcal/mol (3602.5190 without restraints) Performing minimization step: 1597. Total energy = 3611.3943 kcal/mol (3602.2777 without restraints) Performing minimization step: 1598. Total energy = 3611.1502 kcal/mol (3602.0365 without restraints) Performing minimization step: 1599. Total energy = 3610.9058 kcal/mol (3601.7951 without restraints) Performing minimization step: 1600. Total energy = 3610.6617 kcal/mol (3601.5539 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e0aaf9ce/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 1601. Total energy = 3610.4180 kcal/mol (3601.3131 without restraints) Performing minimization step: 1602. Total energy = 3610.1747 kcal/mol (3601.0726 without restraints) Performing minimization step: 1603. Total energy = 3609.9315 kcal/mol (3600.8325 without restraints) Performing minimization step: 1604. Total energy = 3609.6887 kcal/mol (3600.5925 without restraints) Performing minimization step: 1605. Total energy = 3609.4458 kcal/mol (3600.3526 without restraints) Performing minimization step: 1606. Total energy = 3609.2033 kcal/mol (3600.1126 without restraints) Performing minimization step: 1607. Total energy = 3608.9603 kcal/mol (3599.8729 without restraints) Performing minimization step: 1608. Total energy = 3608.7179 kcal/mol (3599.6333 without restraints) Performing minimization step: 1609. Total energy = 3608.4760 kcal/mol (3599.3943 without restraints) Performing minimization step: 1610. Total energy = 3608.2339 kcal/mol (3599.1549 without restraints) Performing minimization step: 1611. Total energy = 3607.9918 kcal/mol (3598.9160 without restraints) Performing minimization step: 1612. Total energy = 3607.7504 kcal/mol (3598.6775 without restraints) Performing minimization step: 1613. Total energy = 3607.5086 kcal/mol (3598.4384 without restraints) Performing minimization step: 1614. Total energy = 3607.2674 kcal/mol (3598.2002 without restraints) Performing minimization step: 1615. Total energy = 3607.0262 kcal/mol (3597.9618 without restraints) Performing minimization step: 1616. Total energy = 3606.7851 kcal/mol (3597.7237 without restraints) Performing minimization step: 1617. Total energy = 3606.5444 kcal/mol (3597.4859 without restraints) Performing minimization step: 1618. Total energy = 3606.3037 kcal/mol (3597.2481 without restraints) Performing minimization step: 1619. Total energy = 3606.0633 kcal/mol (3597.0105 without restraints) Performing minimization step: 1620. Total energy = 3605.8235 kcal/mol (3596.7737 without restraints) Performing minimization step: 1621. Total energy = 3605.5836 kcal/mol (3596.5366 without restraints) Performing minimization step: 1622. Total energy = 3605.3435 kcal/mol (3596.2994 without restraints) Performing minimization step: 1623. Total energy = 3605.1036 kcal/mol (3596.0622 without restraints) Performing minimization step: 1624. Total energy = 3604.8637 kcal/mol (3595.8253 without restraints) Performing minimization step: 1625. Total energy = 3604.6241 kcal/mol (3595.5886 without restraints) Performing minimization step: 1626. Total energy = 3604.3847 kcal/mol (3595.3519 without restraints) Performing minimization step: 1627. Total energy = 3604.1458 kcal/mol (3595.1161 without restraints) Performing minimization step: 1628. Total energy = 3603.9071 kcal/mol (3594.8801 without restraints) Performing minimization step: 1629. Total energy = 3603.6685 kcal/mol (3594.6444 without restraints) Performing minimization step: 1630. Total energy = 3603.4299 kcal/mol (3594.4085 without restraints) Performing minimization step: 1631. Total energy = 3603.1916 kcal/mol (3594.1732 without restraints) Performing minimization step: 1632. Total energy = 3602.9533 kcal/mol (3593.9378 without restraints) Performing minimization step: 1633. Total energy = 3602.7155 kcal/mol (3593.7029 without restraints) Performing minimization step: 1634. Total energy = 3602.4775 kcal/mol (3593.4678 without restraints) Performing minimization step: 1635. Total energy = 3602.2400 kcal/mol (3593.2330 without restraints) Performing minimization step: 1636. Total energy = 3602.0027 kcal/mol (3592.9989 without restraints) Performing minimization step: 1637. Total energy = 3601.7654 kcal/mol (3592.7643 without restraints) Performing minimization step: 1638. Total energy = 3601.5291 kcal/mol (3592.5308 without restraints) Performing minimization step: 1639. Total energy = 3601.2922 kcal/mol (3592.2968 without restraints) Performing minimization step: 1640. Total energy = 3601.0555 kcal/mol (3592.0629 without restraints) Performing minimization step: 1641. Total energy = 3600.8190 kcal/mol (3591.8293 without restraints) Performing minimization step: 1642. Total energy = 3600.5825 kcal/mol (3591.5956 without restraints) Performing minimization step: 1643. Total energy = 3600.3464 kcal/mol (3591.3623 without restraints) Performing minimization step: 1644. Total energy = 3600.1101 kcal/mol (3591.1288 without restraints) Performing minimization step: 1645. Total energy = 3599.8743 kcal/mol (3590.8960 without restraints) Performing minimization step: 1646. Total energy = 3599.6381 kcal/mol (3590.6626 without restraints) Performing minimization step: 1647. Total energy = 3599.4026 kcal/mol (3590.4301 without restraints) Performing minimization step: 1648. Total energy = 3599.1675 kcal/mol (3590.1977 without restraints) Performing minimization step: 1649. Total energy = 3598.9317 kcal/mol (3589.9645 without restraints) Performing minimization step: 1650. Total energy = 3598.6965 kcal/mol (3589.7323 without restraints) Performing minimization step: 1651. Total energy = 3598.4617 kcal/mol (3589.5003 without restraints) Performing minimization step: 1652. Total energy = 3598.2271 kcal/mol (3589.2686 without restraints) Performing minimization step: 1653. Total energy = 3597.9926 kcal/mol (3589.0371 without restraints) Performing minimization step: 1654. Total energy = 3597.7583 kcal/mol (3588.8055 without restraints) Performing minimization step: 1655. Total energy = 3597.5248 kcal/mol (3588.5749 without restraints) Performing minimization step: 1656. Total energy = 3597.2906 kcal/mol (3588.3435 without restraints) Performing minimization step: 1657. Total energy = 3597.0567 kcal/mol (3588.1122 without restraints) Performing minimization step: 1658. Total energy = 3596.8225 kcal/mol (3587.8811 without restraints) Performing minimization step: 1659. Total energy = 3596.5892 kcal/mol (3587.6505 without restraints) Performing minimization step: 1660. Total energy = 3596.3551 kcal/mol (3587.4193 without restraints) Performing minimization step: 1661. Total energy = 3596.1206 kcal/mol (3587.1875 without restraints) Performing minimization step: 1662. Total energy = 3595.8872 kcal/mol (3586.9567 without restraints) Performing minimization step: 1663. Total energy = 3595.6541 kcal/mol (3586.7267 without restraints) Performing minimization step: 1664. Total energy = 3595.4208 kcal/mol (3586.4961 without restraints) Performing minimization step: 1665. Total energy = 3595.1879 kcal/mol (3586.2661 without restraints) Performing minimization step: 1666. Total energy = 3594.9553 kcal/mol (3586.0364 without restraints) Performing minimization step: 1667. Total energy = 3594.7232 kcal/mol (3585.8071 without restraints) Performing minimization step: 1668. Total energy = 3594.4912 kcal/mol (3585.5779 without restraints) Performing minimization step: 1669. Total energy = 3594.2588 kcal/mol (3585.3483 without restraints) Performing minimization step: 1670. Total energy = 3594.0273 kcal/mol (3585.1196 without restraints) Performing minimization step: 1671. Total energy = 3593.7956 kcal/mol (3584.8908 without restraints) Performing minimization step: 1672. Total energy = 3593.5642 kcal/mol (3584.6621 without restraints) Performing minimization step: 1673. Total energy = 3593.3327 kcal/mol (3584.4335 without restraints) Performing minimization step: 1674. Total energy = 3593.1019 kcal/mol (3584.2055 without restraints) Performing minimization step: 1675. Total energy = 3592.8712 kcal/mol (3583.9777 without restraints) Performing minimization step: 1676. Total energy = 3592.6410 kcal/mol (3583.7502 without restraints) Performing minimization step: 1677. Total energy = 3592.4105 kcal/mol (3583.5225 without restraints) Performing minimization step: 1678. Total energy = 3592.1803 kcal/mol (3583.2951 without restraints) Performing minimization step: 1679. Total energy = 3591.9501 kcal/mol (3583.0677 without restraints) Performing minimization step: 1680. Total energy = 3591.7198 kcal/mol (3582.8400 without restraints) Performing minimization step: 1681. Total energy = 3591.4898 kcal/mol (3582.6130 without restraints) Performing minimization step: 1682. Total energy = 3591.2601 kcal/mol (3582.3862 without restraints) Performing minimization step: 1683. Total energy = 3591.0306 kcal/mol (3582.1594 without restraints) Performing minimization step: 1684. Total energy = 3590.8016 kcal/mol (3581.9332 without restraints) Performing minimization step: 1685. Total energy = 3590.5723 kcal/mol (3581.7066 without restraints) Performing minimization step: 1686. Total energy = 3590.3430 kcal/mol (3581.4800 without restraints) Performing minimization step: 1687. Total energy = 3590.1132 kcal/mol (3581.2531 without restraints) Performing minimization step: 1688. Total energy = 3589.8843 kcal/mol (3581.0270 without restraints) Performing minimization step: 1689. Total energy = 3589.6560 kcal/mol (3580.8015 without restraints) Performing minimization step: 1690. Total energy = 3589.4277 kcal/mol (3580.5759 without restraints) Performing minimization step: 1691. Total energy = 3589.1993 kcal/mol (3580.3503 without restraints) Performing minimization step: 1692. Total energy = 3588.9712 kcal/mol (3580.1250 without restraints) Performing minimization step: 1693. Total energy = 3588.7428 kcal/mol (3579.8994 without restraints) Performing minimization step: 1694. Total energy = 3588.5148 kcal/mol (3579.6740 without restraints) Performing minimization step: 1695. Total energy = 3588.2866 kcal/mol (3579.4486 without restraints) Performing minimization step: 1696. Total energy = 3588.0587 kcal/mol (3579.2237 without restraints) Performing minimization step: 1697. Total energy = 3587.8306 kcal/mol (3578.9983 without restraints) Performing minimization step: 1698. Total energy = 3587.6025 kcal/mol (3578.7728 without restraints) Performing minimization step: 1699. Total energy = 3587.3751 kcal/mol (3578.5481 without restraints) Performing minimization step: 1700. Total energy = 3587.1483 kcal/mol (3578.3244 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e0aaf9ce/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 1701. Total energy = 3586.9213 kcal/mol (3578.1001 without restraints) Performing minimization step: 1702. Total energy = 3586.6948 kcal/mol (3577.8764 without restraints) Performing minimization step: 1703. Total energy = 3586.4688 kcal/mol (3577.6531 without restraints) Performing minimization step: 1704. Total energy = 3586.2418 kcal/mol (3577.4289 without restraints) Performing minimization step: 1705. Total energy = 3586.0155 kcal/mol (3577.2054 without restraints) Performing minimization step: 1706. Total energy = 3585.7895 kcal/mol (3576.9823 without restraints) Performing minimization step: 1707. Total energy = 3585.5638 kcal/mol (3576.7591 without restraints) Performing minimization step: 1708. Total energy = 3585.3381 kcal/mol (3576.5363 without restraints) Performing minimization step: 1709. Total energy = 3585.1131 kcal/mol (3576.3140 without restraints) Performing minimization step: 1710. Total energy = 3584.8880 kcal/mol (3576.0915 without restraints) Performing minimization step: 1711. Total energy = 3584.6622 kcal/mol (3575.8686 without restraints) Performing minimization step: 1712. Total energy = 3584.4370 kcal/mol (3575.6462 without restraints) Performing minimization step: 1713. Total energy = 3584.2118 kcal/mol (3575.4236 without restraints) Performing minimization step: 1714. Total energy = 3583.9872 kcal/mol (3575.2018 without restraints) Performing minimization step: 1715. Total energy = 3583.7623 kcal/mol (3574.9797 without restraints) Performing minimization step: 1716. Total energy = 3583.5378 kcal/mol (3574.7580 without restraints) Performing minimization step: 1717. Total energy = 3583.3137 kcal/mol (3574.5366 without restraints) Performing minimization step: 1718. Total energy = 3583.0897 kcal/mol (3574.3154 without restraints) Performing minimization step: 1719. Total energy = 3582.8660 kcal/mol (3574.0944 without restraints) Performing minimization step: 1720. Total energy = 3582.6421 kcal/mol (3573.8734 without restraints) Performing minimization step: 1721. Total energy = 3582.4180 kcal/mol (3573.6518 without restraints) Performing minimization step: 1722. Total energy = 3582.1941 kcal/mol (3573.4308 without restraints) Performing minimization step: 1723. Total energy = 3581.9707 kcal/mol (3573.2100 without restraints) Performing minimization step: 1724. Total energy = 3581.7474 kcal/mol (3572.9895 without restraints) Performing minimization step: 1725. Total energy = 3581.5242 kcal/mol (3572.7690 without restraints) Performing minimization step: 1726. Total energy = 3581.3011 kcal/mol (3572.5486 without restraints) Performing minimization step: 1727. Total energy = 3581.0781 kcal/mol (3572.3281 without restraints) Performing minimization step: 1728. Total energy = 3580.8555 kcal/mol (3572.1085 without restraints) Performing minimization step: 1729. Total energy = 3580.6333 kcal/mol (3571.8891 without restraints) Performing minimization step: 1730. Total energy = 3580.4111 kcal/mol (3571.6696 without restraints) Performing minimization step: 1731. Total energy = 3580.1884 kcal/mol (3571.4496 without restraints) Performing minimization step: 1732. Total energy = 3579.9656 kcal/mol (3571.2294 without restraints) Performing minimization step: 1733. Total energy = 3579.7437 kcal/mol (3571.0104 without restraints) Performing minimization step: 1734. Total energy = 3579.5223 kcal/mol (3570.7918 without restraints) Performing minimization step: 1735. Total energy = 3579.3008 kcal/mol (3570.5730 without restraints) Performing minimization step: 1736. Total energy = 3579.0797 kcal/mol (3570.3546 without restraints) Performing minimization step: 1737. Total energy = 3578.8584 kcal/mol (3570.1360 without restraints) Performing minimization step: 1738. Total energy = 3578.6373 kcal/mol (3569.9177 without restraints) Performing minimization step: 1739. Total energy = 3578.4161 kcal/mol (3569.6992 without restraints) Performing minimization step: 1740. Total energy = 3578.1949 kcal/mol (3569.4807 without restraints) Performing minimization step: 1741. Total energy = 3577.9741 kcal/mol (3569.2627 without restraints) Performing minimization step: 1742. Total energy = 3577.7536 kcal/mol (3569.0448 without restraints) Performing minimization step: 1743. Total energy = 3577.5334 kcal/mol (3568.8273 without restraints) Performing minimization step: 1744. Total energy = 3577.3131 kcal/mol (3568.6097 without restraints) Performing minimization step: 1745. Total energy = 3577.0933 kcal/mol (3568.3926 without restraints) Performing minimization step: 1746. Total energy = 3576.8734 kcal/mol (3568.1755 without restraints) Performing minimization step: 1747. Total energy = 3576.6538 kcal/mol (3567.9586 without restraints) Performing minimization step: 1748. Total energy = 3576.4346 kcal/mol (3567.7422 without restraints) Performing minimization step: 1749. Total energy = 3576.2151 kcal/mol (3567.5253 without restraints) Performing minimization step: 1750. Total energy = 3575.9963 kcal/mol (3567.3092 without restraints) Performing minimization step: 1751. Total energy = 3575.7765 kcal/mol (3567.0919 without restraints) Performing minimization step: 1752. Total energy = 3575.5572 kcal/mol (3566.8755 without restraints) Performing minimization step: 1753. Total energy = 3575.3376 kcal/mol (3566.6586 without restraints) Performing minimization step: 1754. Total energy = 3575.1186 kcal/mol (3566.4422 without restraints) Performing minimization step: 1755. Total energy = 3574.9000 kcal/mol (3566.2264 without restraints) Performing minimization step: 1756. Total energy = 3574.6817 kcal/mol (3566.0109 without restraints) Performing minimization step: 1757. Total energy = 3574.4627 kcal/mol (3565.7945 without restraints) Performing minimization step: 1758. Total energy = 3574.2443 kcal/mol (3565.5789 without restraints) Performing minimization step: 1759. Total energy = 3574.0260 kcal/mol (3565.3632 without restraints) Performing minimization step: 1760. Total energy = 3573.8080 kcal/mol (3565.1480 without restraints) Performing minimization step: 1761. Total energy = 3573.5901 kcal/mol (3564.9327 without restraints) Performing minimization step: 1762. Total energy = 3573.3725 kcal/mol (3564.7178 without restraints) Performing minimization step: 1763. Total energy = 3573.1552 kcal/mol (3564.5032 without restraints) Performing minimization step: 1764. Total energy = 3572.9375 kcal/mol (3564.2881 without restraints) Performing minimization step: 1765. Total energy = 3572.7202 kcal/mol (3564.0736 without restraints) Performing minimization step: 1766. Total energy = 3572.5033 kcal/mol (3563.8594 without restraints) Performing minimization step: 1767. Total energy = 3572.2867 kcal/mol (3563.6453 without restraints) Performing minimization step: 1768. Total energy = 3572.0694 kcal/mol (3563.4307 without restraints) Performing minimization step: 1769. Total energy = 3571.8528 kcal/mol (3563.2170 without restraints) Performing minimization step: 1770. Total energy = 3571.6365 kcal/mol (3563.0033 without restraints) Performing minimization step: 1771. Total energy = 3571.4202 kcal/mol (3562.7897 without restraints) Performing minimization step: 1772. Total energy = 3571.2042 kcal/mol (3562.5763 without restraints) Performing minimization step: 1773. Total energy = 3570.9879 kcal/mol (3562.3627 without restraints) Performing minimization step: 1774. Total energy = 3570.7722 kcal/mol (3562.1498 without restraints) Performing minimization step: 1775. Total energy = 3570.5561 kcal/mol (3561.9363 without restraints) Performing minimization step: 1776. Total energy = 3570.3404 kcal/mol (3561.7233 without restraints) Performing minimization step: 1777. Total energy = 3570.1250 kcal/mol (3561.5105 without restraints) Performing minimization step: 1778. Total energy = 3569.9099 kcal/mol (3561.2981 without restraints) Performing minimization step: 1779. Total energy = 3569.6950 kcal/mol (3561.0860 without restraints) Performing minimization step: 1780. Total energy = 3569.4799 kcal/mol (3560.8734 without restraints) Performing minimization step: 1781. Total energy = 3569.2649 kcal/mol (3560.6611 without restraints) Performing minimization step: 1782. Total energy = 3569.0504 kcal/mol (3560.4493 without restraints) Performing minimization step: 1783. Total energy = 3568.8357 kcal/mol (3560.2373 without restraints) Performing minimization step: 1784. Total energy = 3568.6212 kcal/mol (3560.0253 without restraints) Performing minimization step: 1785. Total energy = 3568.4063 kcal/mol (3559.8132 without restraints) Performing minimization step: 1786. Total energy = 3568.1921 kcal/mol (3559.6016 without restraints) Performing minimization step: 1787. Total energy = 3567.9780 kcal/mol (3559.3903 without restraints) Performing minimization step: 1788. Total energy = 3567.7646 kcal/mol (3559.1796 without restraints) Performing minimization step: 1789. Total energy = 3567.5510 kcal/mol (3558.9686 without restraints) Performing minimization step: 1790. Total energy = 3567.3373 kcal/mol (3558.7574 without restraints) Performing minimization step: 1791. Total energy = 3567.1240 kcal/mol (3558.5468 without restraints) Performing minimization step: 1792. Total energy = 3566.9103 kcal/mol (3558.3358 without restraints) Performing minimization step: 1793. Total energy = 3566.6969 kcal/mol (3558.1252 without restraints) Performing minimization step: 1794. Total energy = 3566.4838 kcal/mol (3557.9147 without restraints) Performing minimization step: 1795. Total energy = 3566.2709 kcal/mol (3557.7044 without restraints) Performing minimization step: 1796. Total energy = 3566.0579 kcal/mol (3557.4940 without restraints) Performing minimization step: 1797. Total energy = 3565.8450 kcal/mol (3557.2838 without restraints) Performing minimization step: 1798. Total energy = 3565.6327 kcal/mol (3557.0743 without restraints) Performing minimization step: 1799. Total energy = 3565.4207 kcal/mol (3556.8649 without restraints) Performing minimization step: 1800. Total energy = 3565.2084 kcal/mol (3556.6550 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e0aaf9ce/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 1801. Total energy = 3564.9960 kcal/mol (3556.4451 without restraints) Performing minimization step: 1802. Total energy = 3564.7841 kcal/mol (3556.2362 without restraints) Performing minimization step: 1803. Total energy = 3564.5725 kcal/mol (3556.0272 without restraints) Performing minimization step: 1804. Total energy = 3564.3610 kcal/mol (3555.8183 without restraints) Performing minimization step: 1805. Total energy = 3564.1497 kcal/mol (3555.6097 without restraints) Performing minimization step: 1806. Total energy = 3563.9384 kcal/mol (3555.4010 without restraints) Performing minimization step: 1807. Total energy = 3563.7276 kcal/mol (3555.1929 without restraints) Performing minimization step: 1808. Total energy = 3563.5164 kcal/mol (3554.9843 without restraints) Performing minimization step: 1809. Total energy = 3563.3056 kcal/mol (3554.7762 without restraints) Performing minimization step: 1810. Total energy = 3563.0943 kcal/mol (3554.5675 without restraints) Performing minimization step: 1811. Total energy = 3562.8838 kcal/mol (3554.3596 without restraints) Performing minimization step: 1812. Total energy = 3562.6735 kcal/mol (3554.1520 without restraints) Performing minimization step: 1813. Total energy = 3562.4628 kcal/mol (3553.9439 without restraints) Performing minimization step: 1814. Total energy = 3562.2525 kcal/mol (3553.7364 without restraints) Performing minimization step: 1815. Total energy = 3562.0426 kcal/mol (3553.5289 without restraints) Performing minimization step: 1816. Total energy = 3561.8326 kcal/mol (3553.3216 without restraints) Performing minimization step: 1817. Total energy = 3561.6228 kcal/mol (3553.1144 without restraints) Performing minimization step: 1818. Total energy = 3561.4133 kcal/mol (3552.9076 without restraints) Performing minimization step: 1819. Total energy = 3561.2040 kcal/mol (3552.7009 without restraints) Performing minimization step: 1820. Total energy = 3560.9945 kcal/mol (3552.4939 without restraints) Performing minimization step: 1821. Total energy = 3560.7853 kcal/mol (3552.2877 without restraints) Performing minimization step: 1822. Total energy = 3560.5760 kcal/mol (3552.0808 without restraints) Performing minimization step: 1823. Total energy = 3560.3668 kcal/mol (3551.8742 without restraints) Performing minimization step: 1824. Total energy = 3560.1579 kcal/mol (3551.6679 without restraints) Performing minimization step: 1825. Total energy = 3559.9490 kcal/mol (3551.4617 without restraints) Performing minimization step: 1826. Total energy = 3559.7399 kcal/mol (3551.2552 without restraints) Performing minimization step: 1827. Total energy = 3559.5318 kcal/mol (3551.0493 without restraints) Performing minimization step: 1828. Total energy = 3559.3233 kcal/mol (3550.8438 without restraints) Performing minimization step: 1829. Total energy = 3559.1152 kcal/mol (3550.6385 without restraints) Performing minimization step: 1830. Total energy = 3558.9074 kcal/mol (3550.4330 without restraints) Performing minimization step: 1831. Total energy = 3558.6991 kcal/mol (3550.2274 without restraints) Performing minimization step: 1832. Total energy = 3558.4913 kcal/mol (3550.0223 without restraints) Performing minimization step: 1833. Total energy = 3558.2832 kcal/mol (3549.8168 without restraints) Performing minimization step: 1834. Total energy = 3558.0758 kcal/mol (3549.6121 without restraints) Performing minimization step: 1835. Total energy = 3557.8684 kcal/mol (3549.4070 without restraints) Performing minimization step: 1836. Total energy = 3557.6609 kcal/mol (3549.2023 without restraints) Performing minimization step: 1837. Total energy = 3557.4537 kcal/mol (3548.9977 without restraints) Performing minimization step: 1838. Total energy = 3557.2465 kcal/mol (3548.7932 without restraints) Performing minimization step: 1839. Total energy = 3557.0393 kcal/mol (3548.5885 without restraints) Performing minimization step: 1840. Total energy = 3556.8326 kcal/mol (3548.3841 without restraints) Performing minimization step: 1841. Total energy = 3556.6256 kcal/mol (3548.1802 without restraints) Performing minimization step: 1842. Total energy = 3556.4193 kcal/mol (3547.9763 without restraints) Performing minimization step: 1843. Total energy = 3556.2130 kcal/mol (3547.7725 without restraints) Performing minimization step: 1844. Total energy = 3556.0065 kcal/mol (3547.5687 without restraints) Performing minimization step: 1845. Total energy = 3555.8003 kcal/mol (3547.3651 without restraints) Performing minimization step: 1846. Total energy = 3555.5943 kcal/mol (3547.1617 without restraints) Performing minimization step: 1847. Total energy = 3555.3880 kcal/mol (3546.9580 without restraints) Performing minimization step: 1848. Total energy = 3555.1823 kcal/mol (3546.7551 without restraints) Performing minimization step: 1849. Total energy = 3554.9764 kcal/mol (3546.5515 without restraints) Performing minimization step: 1850. Total energy = 3554.7707 kcal/mol (3546.3485 without restraints) Performing minimization step: 1851. Total energy = 3554.5655 kcal/mol (3546.1459 without restraints) Performing minimization step: 1852. Total energy = 3554.3602 kcal/mol (3545.9432 without restraints) Performing minimization step: 1853. Total energy = 3554.1551 kcal/mol (3545.7407 without restraints) Performing minimization step: 1854. Total energy = 3553.9499 kcal/mol (3545.5381 without restraints) Performing minimization step: 1855. Total energy = 3553.7448 kcal/mol (3545.3355 without restraints) Performing minimization step: 1856. Total energy = 3553.5402 kcal/mol (3545.1336 without restraints) Performing minimization step: 1857. Total energy = 3553.3362 kcal/mol (3544.9321 without restraints) Performing minimization step: 1858. Total energy = 3553.1324 kcal/mol (3544.7310 without restraints) Performing minimization step: 1859. Total energy = 3552.9284 kcal/mol (3544.5295 without restraints) Performing minimization step: 1860. Total energy = 3552.7226 kcal/mol (3544.3262 without restraints) Performing minimization step: 1861. Total energy = 3552.5184 kcal/mol (3544.1247 without restraints) Performing minimization step: 1862. Total energy = 3552.3144 kcal/mol (3543.9233 without restraints) Performing minimization step: 1863. Total energy = 3552.1106 kcal/mol (3543.7219 without restraints) Performing minimization step: 1864. Total energy = 3551.9068 kcal/mol (3543.5207 without restraints) Performing minimization step: 1865. Total energy = 3551.7027 kcal/mol (3543.3192 without restraints) Performing minimization step: 1866. Total energy = 3551.4992 kcal/mol (3543.1183 without restraints) Performing minimization step: 1867. Total energy = 3551.2958 kcal/mol (3542.9174 without restraints) Performing minimization step: 1868. Total energy = 3551.0927 kcal/mol (3542.7170 without restraints) Performing minimization step: 1869. Total energy = 3550.8895 kcal/mol (3542.5163 without restraints) Performing minimization step: 1870. Total energy = 3550.6864 kcal/mol (3542.3159 without restraints) Performing minimization step: 1871. Total energy = 3550.4831 kcal/mol (3542.1151 without restraints) Performing minimization step: 1872. Total energy = 3550.2801 kcal/mol (3541.9147 without restraints) Performing minimization step: 1873. Total energy = 3550.0775 kcal/mol (3541.7147 without restraints) Performing minimization step: 1874. Total energy = 3549.8750 kcal/mol (3541.5147 without restraints) Performing minimization step: 1875. Total energy = 3549.6722 kcal/mol (3541.3145 without restraints) Performing minimization step: 1876. Total energy = 3549.4824 kcal/mol (3541.1146 without restraints) Performing minimization step: 1877. Total energy = 3549.2709 kcal/mol (3540.9149 without restraints) Performing minimization step: 1878. Total energy = 3549.0655 kcal/mol (3540.7154 without restraints) Performing minimization step: 1879. Total energy = 3548.8635 kcal/mol (3540.5159 without restraints) Performing minimization step: 1880. Total energy = 3548.6616 kcal/mol (3540.3168 without restraints) Performing minimization step: 1881. Total energy = 3548.4602 kcal/mol (3540.1181 without restraints) Performing minimization step: 1882. Total energy = 3548.2587 kcal/mol (3539.9188 without restraints) Performing minimization step: 1883. Total energy = 3548.0569 kcal/mol (3539.7196 without restraints) Performing minimization step: 1884. Total energy = 3547.8556 kcal/mol (3539.5209 without restraints) Performing minimization step: 1885. Total energy = 3547.6542 kcal/mol (3539.3219 without restraints) Performing minimization step: 1886. Total energy = 3547.4528 kcal/mol (3539.1233 without restraints) Performing minimization step: 1887. Total energy = 3547.2521 kcal/mol (3538.9250 without restraints) Performing minimization step: 1888. Total energy = 3547.0515 kcal/mol (3538.7270 without restraints) Performing minimization step: 1889. Total energy = 3546.8509 kcal/mol (3538.5290 without restraints) Performing minimization step: 1890. Total energy = 3546.6499 kcal/mol (3538.3306 without restraints) Performing minimization step: 1891. Total energy = 3546.4493 kcal/mol (3538.1325 without restraints) Performing minimization step: 1892. Total energy = 3546.2488 kcal/mol (3537.9345 without restraints) Performing minimization step: 1893. Total energy = 3546.0486 kcal/mol (3537.7369 without restraints) Performing minimization step: 1894. Total energy = 3545.8485 kcal/mol (3537.5394 without restraints) Performing minimization step: 1895. Total energy = 3545.6484 kcal/mol (3537.3418 without restraints) Performing minimization step: 1896. Total energy = 3545.4486 kcal/mol (3537.1444 without restraints) Performing minimization step: 1897. Total energy = 3545.2487 kcal/mol (3536.9471 without restraints) Performing minimization step: 1898. Total energy = 3545.0489 kcal/mol (3536.7500 without restraints) Performing minimization step: 1899. Total energy = 3544.8496 kcal/mol (3536.5531 without restraints) Performing minimization step: 1900. Total energy = 3544.6497 kcal/mol (3536.3558 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e0aaf9ce/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 1901. Total energy = 3544.4511 kcal/mol (3536.1598 without restraints) Performing minimization step: 1902. Total energy = 3544.2522 kcal/mol (3535.9634 without restraints) Performing minimization step: 1903. Total energy = 3544.0535 kcal/mol (3535.7672 without restraints) Performing minimization step: 1904. Total energy = 3543.8545 kcal/mol (3535.5708 without restraints) Performing minimization step: 1905. Total energy = 3543.6559 kcal/mol (3535.3746 without restraints) Performing minimization step: 1906. Total energy = 3543.4573 kcal/mol (3535.1786 without restraints) Performing minimization step: 1907. Total energy = 3543.2587 kcal/mol (3534.9826 without restraints) Performing minimization step: 1908. Total energy = 3543.0604 kcal/mol (3534.7868 without restraints) Performing minimization step: 1909. Total energy = 3542.8622 kcal/mol (3534.5911 without restraints) Performing minimization step: 1910. Total energy = 3542.6637 kcal/mol (3534.3951 without restraints) Performing minimization step: 1911. Total energy = 3542.4652 kcal/mol (3534.1992 without restraints) Performing minimization step: 1912. Total energy = 3542.2676 kcal/mol (3534.0041 without restraints) Performing minimization step: 1913. Total energy = 3542.0701 kcal/mol (3533.8091 without restraints) Performing minimization step: 1914. Total energy = 3541.8719 kcal/mol (3533.6135 without restraints) Performing minimization step: 1915. Total energy = 3541.6740 kcal/mol (3533.4181 without restraints) Performing minimization step: 1916. Total energy = 3541.4762 kcal/mol (3533.2228 without restraints) Performing minimization step: 1917. Total energy = 3541.2791 kcal/mol (3533.0282 without restraints) Performing minimization step: 1918. Total energy = 3541.0820 kcal/mol (3532.8335 without restraints) Performing minimization step: 1919. Total energy = 3540.8847 kcal/mol (3532.6389 without restraints) Performing minimization step: 1920. Total energy = 3540.6877 kcal/mol (3532.4444 without restraints) Performing minimization step: 1921. Total energy = 3540.4914 kcal/mol (3532.2506 without restraints) Performing minimization step: 1922. Total energy = 3540.2947 kcal/mol (3532.0565 without restraints) Performing minimization step: 1923. Total energy = 3540.0981 kcal/mol (3531.8623 without restraints) Performing minimization step: 1924. Total energy = 3539.9016 kcal/mol (3531.6683 without restraints) Performing minimization step: 1925. Total energy = 3539.7048 kcal/mol (3531.4740 without restraints) Performing minimization step: 1926. Total energy = 3539.5083 kcal/mol (3531.2801 without restraints) Performing minimization step: 1927. Total energy = 3539.3119 kcal/mol (3531.0864 without restraints) Performing minimization step: 1928. Total energy = 3539.1161 kcal/mol (3530.8929 without restraints) Performing minimization step: 1929. Total energy = 3538.9202 kcal/mol (3530.6995 without restraints) Performing minimization step: 1930. Total energy = 3538.7245 kcal/mol (3530.5064 without restraints) Performing minimization step: 1931. Total energy = 3538.5285 kcal/mol (3530.3131 without restraints) Performing minimization step: 1932. Total energy = 3538.3333 kcal/mol (3530.1202 without restraints) Performing minimization step: 1933. Total energy = 3538.1379 kcal/mol (3529.9273 without restraints) Performing minimization step: 1934. Total energy = 3537.9426 kcal/mol (3529.7344 without restraints) Performing minimization step: 1935. Total energy = 3537.7474 kcal/mol (3529.5418 without restraints) Performing minimization step: 1936. Total energy = 3537.5523 kcal/mol (3529.3492 without restraints) Performing minimization step: 1937. Total energy = 3537.3572 kcal/mol (3529.1566 without restraints) Performing minimization step: 1938. Total energy = 3537.1624 kcal/mol (3528.9644 without restraints) Performing minimization step: 1939. Total energy = 3536.9668 kcal/mol (3528.7709 without restraints) Performing minimization step: 1940. Total energy = 3536.7720 kcal/mol (3528.5788 without restraints) Performing minimization step: 1941. Total energy = 3536.5777 kcal/mol (3528.3871 without restraints) Performing minimization step: 1942. Total energy = 3536.3827 kcal/mol (3528.1946 without restraints) Performing minimization step: 1943. Total energy = 3536.1882 kcal/mol (3528.0026 without restraints) Performing minimization step: 1944. Total energy = 3535.9938 kcal/mol (3527.8107 without restraints) Performing minimization step: 1945. Total energy = 3535.7994 kcal/mol (3527.6187 without restraints) Performing minimization step: 1946. Total energy = 3535.6052 kcal/mol (3527.4271 without restraints) Performing minimization step: 1947. Total energy = 3535.4115 kcal/mol (3527.2357 without restraints) Performing minimization step: 1948. Total energy = 3535.2177 kcal/mol (3527.0446 without restraints) Performing minimization step: 1949. Total energy = 3535.0244 kcal/mol (3526.8538 without restraints) Performing minimization step: 1950. Total energy = 3534.8309 kcal/mol (3526.6627 without restraints) Performing minimization step: 1951. Total energy = 3534.6375 kcal/mol (3526.4719 without restraints) Performing minimization step: 1952. Total energy = 3534.4445 kcal/mol (3526.2813 without restraints) Performing minimization step: 1953. Total energy = 3534.2508 kcal/mol (3526.0895 without restraints) Performing minimization step: 1954. Total energy = 3534.0570 kcal/mol (3525.8988 without restraints) Performing minimization step: 1955. Total energy = 3533.8641 kcal/mol (3525.7083 without restraints) Performing minimization step: 1956. Total energy = 3533.6713 kcal/mol (3525.5180 without restraints) Performing minimization step: 1957. Total energy = 3533.4787 kcal/mol (3525.3279 without restraints) Performing minimization step: 1958. Total energy = 3533.2864 kcal/mol (3525.1381 without restraints) Performing minimization step: 1959. Total energy = 3533.0943 kcal/mol (3524.9485 without restraints) Performing minimization step: 1960. Total energy = 3532.9022 kcal/mol (3524.7589 without restraints) Performing minimization step: 1961. Total energy = 3532.7098 kcal/mol (3524.5689 without restraints) Performing minimization step: 1962. Total energy = 3532.5174 kcal/mol (3524.3790 without restraints) Performing minimization step: 1963. Total energy = 3532.3254 kcal/mol (3524.1895 without restraints) Performing minimization step: 1964. Total energy = 3532.1335 kcal/mol (3524.0001 without restraints) Performing minimization step: 1965. Total energy = 3531.9414 kcal/mol (3523.8105 without restraints) Performing minimization step: 1966. Total energy = 3531.7497 kcal/mol (3523.6212 without restraints) Performing minimization step: 1967. Total energy = 3531.5580 kcal/mol (3523.4320 without restraints) Performing minimization step: 1968. Total energy = 3531.3663 kcal/mol (3523.2428 without restraints) Performing minimization step: 1969. Total energy = 3531.1746 kcal/mol (3523.0535 without restraints) Performing minimization step: 1970. Total energy = 3530.9835 kcal/mol (3522.8649 without restraints) Performing minimization step: 1971. Total energy = 3530.7923 kcal/mol (3522.6762 without restraints) Performing minimization step: 1972. Total energy = 3530.6010 kcal/mol (3522.4873 without restraints) Performing minimization step: 1973. Total energy = 3530.4100 kcal/mol (3522.2987 without restraints) Performing minimization step: 1974. Total energy = 3530.2190 kcal/mol (3522.1103 without restraints) Performing minimization step: 1975. Total energy = 3530.0284 kcal/mol (3521.9220 without restraints) Performing minimization step: 1976. Total energy = 3529.8376 kcal/mol (3521.7338 without restraints) Performing minimization step: 1977. Total energy = 3529.6469 kcal/mol (3521.5455 without restraints) Performing minimization step: 1978. Total energy = 3529.4562 kcal/mol (3521.3573 without restraints) Performing minimization step: 1979. Total energy = 3529.2657 kcal/mol (3521.1692 without restraints) Performing minimization step: 1980. Total energy = 3529.0753 kcal/mol (3520.9814 without restraints) Performing minimization step: 1981. Total energy = 3528.8846 kcal/mol (3520.7930 without restraints) Performing minimization step: 1982. Total energy = 3528.6946 kcal/mol (3520.6056 without restraints) Performing minimization step: 1983. Total energy = 3528.5047 kcal/mol (3520.4181 without restraints) Performing minimization step: 1984. Total energy = 3528.3147 kcal/mol (3520.2305 without restraints) Performing minimization step: 1985. Total energy = 3528.1249 kcal/mol (3520.0431 without restraints) Performing minimization step: 1986. Total energy = 3527.9352 kcal/mol (3519.8560 without restraints) Performing minimization step: 1987. Total energy = 3527.7460 kcal/mol (3519.6692 without restraints) Performing minimization step: 1988. Total energy = 3527.5565 kcal/mol (3519.4823 without restraints) Performing minimization step: 1989. Total energy = 3527.3671 kcal/mol (3519.2952 without restraints) Performing minimization step: 1990. Total energy = 3527.1780 kcal/mol (3519.1085 without restraints) Performing minimization step: 1991. Total energy = 3526.9892 kcal/mol (3518.9223 without restraints) Performing minimization step: 1992. Total energy = 3526.8001 kcal/mol (3518.7355 without restraints) Performing minimization step: 1993. Total energy = 3526.6112 kcal/mol (3518.5491 without restraints) Performing minimization step: 1994. Total energy = 3526.4225 kcal/mol (3518.3630 without restraints) Performing minimization step: 1995. Total energy = 3526.2342 kcal/mol (3518.1771 without restraints) Performing minimization step: 1996. Total energy = 3526.0456 kcal/mol (3517.9909 without restraints) Performing minimization step: 1997. Total energy = 3525.8573 kcal/mol (3517.8049 without restraints) Performing minimization step: 1998. Total energy = 3525.6685 kcal/mol (3517.6186 without restraints) Performing minimization step: 1999. Total energy = 3525.4804 kcal/mol (3517.4330 without restraints) Performing minimization step: 2000. Total energy = 3525.2922 kcal/mol (3517.2472 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e0aaf9ce/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 2001. Total energy = 3525.1042 kcal/mol (3517.0617 without restraints) Performing minimization step: 2002. Total energy = 3524.9163 kcal/mol (3516.8762 without restraints) Performing minimization step: 2003. Total energy = 3524.7285 kcal/mol (3516.6909 without restraints) Performing minimization step: 2004. Total energy = 3524.5402 kcal/mol (3516.5049 without restraints) Performing minimization step: 2005. Total energy = 3524.3523 kcal/mol (3516.3194 without restraints) Performing minimization step: 2006. Total energy = 3524.1645 kcal/mol (3516.1340 without restraints) Performing minimization step: 2007. Total energy = 3523.9768 kcal/mol (3515.9489 without restraints) Performing minimization step: 2008. Total energy = 3523.7894 kcal/mol (3515.7639 without restraints) Performing minimization step: 2009. Total energy = 3523.6021 kcal/mol (3515.5791 without restraints) Performing minimization step: 2010. Total energy = 3523.4148 kcal/mol (3515.3942 without restraints) Performing minimization step: 2011. Total energy = 3523.2276 kcal/mol (3515.2094 without restraints) Performing minimization step: 2012. Total energy = 3523.0405 kcal/mol (3515.0247 without restraints) Performing minimization step: 2013. Total energy = 3522.8532 kcal/mol (3514.8399 without restraints) Performing minimization step: 2014. Total energy = 3522.6669 kcal/mol (3514.6560 without restraints) Performing minimization step: 2015. Total energy = 3522.4793 kcal/mol (3514.4708 without restraints) Performing minimization step: 2016. Total energy = 3522.2925 kcal/mol (3514.2863 without restraints) Performing minimization step: 2017. Total energy = 3522.1060 kcal/mol (3514.1024 without restraints) Performing minimization step: 2018. Total energy = 3521.9197 kcal/mol (3513.9183 without restraints) Performing minimization step: 2019. Total energy = 3521.7335 kcal/mol (3513.7345 without restraints) Performing minimization step: 2020. Total energy = 3521.5476 kcal/mol (3513.5512 without restraints) Performing minimization step: 2021. Total energy = 3521.3612 kcal/mol (3513.3671 without restraints) Performing minimization step: 2022. Total energy = 3521.1752 kcal/mol (3513.1835 without restraints) Performing minimization step: 2023. Total energy = 3520.9893 kcal/mol (3513.0001 without restraints) Performing minimization step: 2024. Total energy = 3520.8036 kcal/mol (3512.8169 without restraints) Performing minimization step: 2025. Total energy = 3520.6181 kcal/mol (3512.6338 without restraints) Performing minimization step: 2026. Total energy = 3520.4328 kcal/mol (3512.4509 without restraints) Performing minimization step: 2027. Total energy = 3520.2476 kcal/mol (3512.2680 without restraints) Performing minimization step: 2028. Total energy = 3520.0619 kcal/mol (3512.0848 without restraints) Performing minimization step: 2029. Total energy = 3519.8766 kcal/mol (3511.9019 without restraints) Performing minimization step: 2030. Total energy = 3519.6913 kcal/mol (3511.7190 without restraints) Performing minimization step: 2031. Total energy = 3519.5062 kcal/mol (3511.5363 without restraints) Performing minimization step: 2032. Total energy = 3519.3212 kcal/mol (3511.3537 without restraints) Performing minimization step: 2033. Total energy = 3519.1368 kcal/mol (3511.1718 without restraints) Performing minimization step: 2034. Total energy = 3518.9519 kcal/mol (3510.9892 without restraints) Performing minimization step: 2035. Total energy = 3518.7673 kcal/mol (3510.8071 without restraints) Performing minimization step: 2036. Total energy = 3518.5827 kcal/mol (3510.6249 without restraints) Performing minimization step: 2037. Total energy = 3518.3975 kcal/mol (3510.4419 without restraints) Performing minimization step: 2038. Total energy = 3518.2125 kcal/mol (3510.2592 without restraints) Performing minimization step: 2039. Total energy = 3518.0283 kcal/mol (3510.0778 without restraints) Performing minimization step: 2040. Total energy = 3517.8440 kcal/mol (3509.8958 without restraints) Performing minimization step: 2041. Total energy = 3517.6601 kcal/mol (3509.7143 without restraints) Performing minimization step: 2042. Total energy = 3517.4763 kcal/mol (3509.5329 without restraints) Performing minimization step: 2043. Total energy = 3517.2926 kcal/mol (3509.3516 without restraints) Performing minimization step: 2044. Total energy = 3517.1089 kcal/mol (3509.1703 without restraints) Performing minimization step: 2045. Total energy = 3516.9252 kcal/mol (3508.9890 without restraints) Performing minimization step: 2046. Total energy = 3516.7422 kcal/mol (3508.8084 without restraints) Performing minimization step: 2047. Total energy = 3516.5585 kcal/mol (3508.6270 without restraints) Performing minimization step: 2048. Total energy = 3516.3752 kcal/mol (3508.4462 without restraints) Performing minimization step: 2049. Total energy = 3516.1920 kcal/mol (3508.2654 without restraints) Performing minimization step: 2050. Total energy = 3516.0092 kcal/mol (3508.0849 without restraints) Performing minimization step: 2051. Total energy = 3515.8263 kcal/mol (3507.9045 without restraints) Performing minimization step: 2052. Total energy = 3515.6433 kcal/mol (3507.7237 without restraints) Performing minimization step: 2053. Total energy = 3515.4610 kcal/mol (3507.5441 without restraints) Performing minimization step: 2054. Total energy = 3515.2781 kcal/mol (3507.3633 without restraints) Performing minimization step: 2055. Total energy = 3515.0956 kcal/mol (3507.1832 without restraints) Performing minimization step: 2056. Total energy = 3514.9130 kcal/mol (3507.0031 without restraints) Performing minimization step: 2057. Total energy = 3514.7310 kcal/mol (3506.8235 without restraints) Performing minimization step: 2058. Total energy = 3514.5487 kcal/mol (3506.6434 without restraints) Performing minimization step: 2059. Total energy = 3514.3666 kcal/mol (3506.4637 without restraints) Performing minimization step: 2060. Total energy = 3514.1839 kcal/mol (3506.2834 without restraints) Performing minimization step: 2061. Total energy = 3514.0016 kcal/mol (3506.1037 without restraints) Performing minimization step: 2062. Total energy = 3513.8196 kcal/mol (3505.9239 without restraints) Performing minimization step: 2063. Total energy = 3513.6379 kcal/mol (3505.7449 without restraints) Performing minimization step: 2064. Total energy = 3513.4562 kcal/mol (3505.5652 without restraints) Performing minimization step: 2065. Total energy = 3513.2743 kcal/mol (3505.3860 without restraints) Performing minimization step: 2066. Total energy = 3513.0928 kcal/mol (3505.2064 without restraints) Performing minimization step: 2067. Total energy = 3512.9114 kcal/mol (3505.0280 without restraints) Performing minimization step: 2068. Total energy = 3512.7303 kcal/mol (3504.8488 without restraints) Performing minimization step: 2069. Total energy = 3512.5499 kcal/mol (3504.6714 without restraints) Performing minimization step: 2070. Total energy = 3512.3692 kcal/mol (3504.4925 without restraints) Performing minimization step: 2071. Total energy = 3512.1895 kcal/mol (3504.3159 without restraints) Performing minimization step: 2072. Total energy = 3512.0104 kcal/mol (3504.1385 without restraints) Performing minimization step: 2073. Total energy = 3511.8324 kcal/mol (3503.9641 without restraints) Performing minimization step: 2074. Total energy = 3511.6544 kcal/mol (3503.7874 without restraints) Performing minimization step: 2075. Total energy = 3511.4779 kcal/mol (3503.6149 without restraints) Performing minimization step: 2076. Total energy = 3511.3022 kcal/mol (3503.4403 without restraints) Performing minimization step: 2077. Total energy = 3511.1287 kcal/mol (3503.2714 without restraints) Performing minimization step: 2078. Total energy = 3510.9560 kcal/mol (3503.0993 without restraints) Performing minimization step: 2079. Total energy = 3510.7857 kcal/mol (3502.9339 without restraints) Performing minimization step: 2080. Total energy = 3510.6155 kcal/mol (3502.7640 without restraints) Performing minimization step: 2081. Total energy = 3510.4480 kcal/mol (3502.6014 without restraints) Performing minimization step: 2082. Total energy = 3510.2796 kcal/mol (3502.4330 without restraints) Performing minimization step: 2083. Total energy = 3510.1141 kcal/mol (3502.2727 without restraints) Performing minimization step: 2084. Total energy = 3509.9476 kcal/mol (3502.1058 without restraints) Performing minimization step: 2085. Total energy = 3509.7832 kcal/mol (3501.9465 without restraints) Performing minimization step: 2086. Total energy = 3509.6177 kcal/mol (3501.7805 without restraints) Performing minimization step: 2087. Total energy = 3509.4543 kcal/mol (3501.6219 without restraints) Performing minimization step: 2088. Total energy = 3509.2885 kcal/mol (3501.4555 without restraints) Performing minimization step: 2089. Total energy = 3509.1256 kcal/mol (3501.2978 without restraints) Performing minimization step: 2090. Total energy = 3508.9608 kcal/mol (3501.1323 without restraints) Performing minimization step: 2091. Total energy = 3508.7986 kcal/mol (3500.9749 without restraints) Performing minimization step: 2092. Total energy = 3508.6340 kcal/mol (3500.8098 without restraints) Performing minimization step: 2093. Total energy = 3508.4723 kcal/mol (3500.6531 without restraints) Performing minimization step: 2094. Total energy = 3508.3087 kcal/mol (3500.4889 without restraints) Performing minimization step: 2095. Total energy = 3508.1470 kcal/mol (3500.3322 without restraints) Performing minimization step: 2096. Total energy = 3507.9835 kcal/mol (3500.1680 without restraints) Performing minimization step: 2097. Total energy = 3507.8219 kcal/mol (3500.0114 without restraints) Performing minimization step: 2098. Total energy = 3507.6590 kcal/mol (3499.8478 without restraints) Performing minimization step: 2099. Total energy = 3507.4980 kcal/mol (3499.6918 without restraints) Performing minimization step: 2100. Total energy = 3507.3349 kcal/mol (3499.5280 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e0aaf9ce/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 2101. Total energy = 3507.1742 kcal/mol (3499.3723 without restraints) Performing minimization step: 2102. Total energy = 3507.0113 kcal/mol (3499.2086 without restraints) Performing minimization step: 2103. Total energy = 3506.8504 kcal/mol (3499.0528 without restraints) Performing minimization step: 2104. Total energy = 3506.6881 kcal/mol (3498.8897 without restraints) Performing minimization step: 2105. Total energy = 3506.5279 kcal/mol (3498.7346 without restraints) Performing minimization step: 2106. Total energy = 3506.3654 kcal/mol (3498.5712 without restraints) Performing minimization step: 2107. Total energy = 3506.2053 kcal/mol (3498.4163 without restraints) Performing minimization step: 2108. Total energy = 3506.0437 kcal/mol (3498.2537 without restraints) Performing minimization step: 2109. Total energy = 3505.8839 kcal/mol (3498.0991 without restraints) Performing minimization step: 2110. Total energy = 3505.7225 kcal/mol (3497.9369 without restraints) Performing minimization step: 2111. Total energy = 3505.5631 kcal/mol (3497.7826 without restraints) Performing minimization step: 2112. Total energy = 3505.4022 kcal/mol (3497.6208 without restraints) Performing minimization step: 2113. Total energy = 3505.2430 kcal/mol (3497.4667 without restraints) Performing minimization step: 2114. Total energy = 3505.0824 kcal/mol (3497.3053 without restraints) Performing minimization step: 2115. Total energy = 3504.9240 kcal/mol (3497.1520 without restraints) Performing minimization step: 2116. Total energy = 3504.7642 kcal/mol (3496.9914 without restraints) Performing minimization step: 2117. Total energy = 3504.6053 kcal/mol (3496.8376 without restraints) Performing minimization step: 2118. Total energy = 3504.4453 kcal/mol (3496.6767 without restraints) Performing minimization step: 2119. Total energy = 3504.2869 kcal/mol (3496.5233 without restraints) Performing minimization step: 2120. Total energy = 3504.1271 kcal/mol (3496.3627 without restraints) Performing minimization step: 2121. Total energy = 3503.9692 kcal/mol (3496.2099 without restraints) Performing minimization step: 2122. Total energy = 3503.8095 kcal/mol (3496.0494 without restraints) Performing minimization step: 2123. Total energy = 3503.6519 kcal/mol (3495.8969 without restraints) Performing minimization step: 2124. Total energy = 3503.4928 kcal/mol (3495.7369 without restraints) Performing minimization step: 2125. Total energy = 3503.3357 kcal/mol (3495.5848 without restraints) Performing minimization step: 2126. Total energy = 3503.1768 kcal/mol (3495.4251 without restraints) Performing minimization step: 2127. Total energy = 3503.0198 kcal/mol (3495.2731 without restraints) Performing minimization step: 2128. Total energy = 3502.8608 kcal/mol (3495.1131 without restraints) Performing minimization step: 2129. Total energy = 3502.7034 kcal/mol (3494.9608 without restraints) Performing minimization step: 2130. Total energy = 3502.5449 kcal/mol (3494.8015 without restraints) Performing minimization step: 2131. Total energy = 3502.3878 kcal/mol (3494.6495 without restraints) Performing minimization step: 2132. Total energy = 3502.2294 kcal/mol (3494.4902 without restraints) Performing minimization step: 2133. Total energy = 3502.0727 kcal/mol (3494.3385 without restraints) Performing minimization step: 2134. Total energy = 3501.9147 kcal/mol (3494.1796 without restraints) Performing minimization step: 2135. Total energy = 3501.7584 kcal/mol (3494.0285 without restraints) Performing minimization step: 2136. Total energy = 3501.6009 kcal/mol (3493.8700 without restraints) Performing minimization step: 2137. Total energy = 3501.4452 kcal/mol (3493.7194 without restraints) Performing minimization step: 2138. Total energy = 3501.2876 kcal/mol (3493.5610 without restraints) Performing minimization step: 2139. Total energy = 3501.1325 kcal/mol (3493.4108 without restraints) Performing minimization step: 2140. Total energy = 3500.9757 kcal/mol (3493.2532 without restraints) Performing minimization step: 2141. Total energy = 3500.8208 kcal/mol (3493.1033 without restraints) Performing minimization step: 2142. Total energy = 3500.6642 kcal/mol (3492.9459 without restraints) Performing minimization step: 2143. Total energy = 3500.5096 kcal/mol (3492.7963 without restraints) Performing minimization step: 2144. Total energy = 3500.3530 kcal/mol (3492.6387 without restraints) Performing minimization step: 2145. Total energy = 3500.1989 kcal/mol (3492.4897 without restraints) Performing minimization step: 2146. Total energy = 3500.0427 kcal/mol (3492.3326 without restraints) Performing minimization step: 2147. Total energy = 3499.8885 kcal/mol (3492.1836 without restraints) Performing minimization step: 2148. Total energy = 3499.7328 kcal/mol (3492.0268 without restraints) Performing minimization step: 2149. Total energy = 3499.5787 kcal/mol (3491.8778 without restraints) Performing minimization step: 2150. Total energy = 3499.4228 kcal/mol (3491.7209 without restraints) Performing minimization step: 2151. Total energy = 3499.2691 kcal/mol (3491.5724 without restraints) Performing minimization step: 2152. Total energy = 3499.1137 kcal/mol (3491.4159 without restraints) Performing minimization step: 2153. Total energy = 3498.9596 kcal/mol (3491.2669 without restraints) Performing minimization step: 2154. Total energy = 3498.8051 kcal/mol (3491.1115 without restraints) Performing minimization step: 2155. Total energy = 3498.6523 kcal/mol (3490.9638 without restraints) Performing minimization step: 2156. Total energy = 3498.4975 kcal/mol (3490.8079 without restraints) Performing minimization step: 2157. Total energy = 3498.3446 kcal/mol (3490.6601 without restraints) Performing minimization step: 2158. Total energy = 3498.1900 kcal/mol (3490.5044 without restraints) Performing minimization step: 2159. Total energy = 3498.0370 kcal/mol (3490.3566 without restraints) Performing minimization step: 2160. Total energy = 3497.8825 kcal/mol (3490.2009 without restraints) Performing minimization step: 2161. Total energy = 3497.7299 kcal/mol (3490.0536 without restraints) Performing minimization step: 2162. Total energy = 3497.5759 kcal/mol (3489.8985 without restraints) Performing minimization step: 2163. Total energy = 3497.4235 kcal/mol (3489.7514 without restraints) Performing minimization step: 2164. Total energy = 3497.2698 kcal/mol (3489.5964 without restraints) Performing minimization step: 2165. Total energy = 3497.1177 kcal/mol (3489.4496 without restraints) Performing minimization step: 2166. Total energy = 3496.9649 kcal/mol (3489.2956 without restraints) Performing minimization step: 2167. Total energy = 3496.8134 kcal/mol (3489.1494 without restraints) Performing minimization step: 2168. Total energy = 3496.6608 kcal/mol (3488.9956 without restraints) Performing minimization step: 2169. Total energy = 3496.5097 kcal/mol (3488.8497 without restraints) Performing minimization step: 2170. Total energy = 3496.3569 kcal/mol (3488.6957 without restraints) Performing minimization step: 2171. Total energy = 3496.2057 kcal/mol (3488.5498 without restraints) Performing minimization step: 2172. Total energy = 3496.0531 kcal/mol (3488.3960 without restraints) Performing minimization step: 2173. Total energy = 3495.9021 kcal/mol (3488.2502 without restraints) Performing minimization step: 2174. Total energy = 3495.7497 kcal/mol (3488.0966 without restraints) Performing minimization step: 2175. Total energy = 3495.5990 kcal/mol (3487.9512 without restraints) Performing minimization step: 2176. Total energy = 3495.4467 kcal/mol (3487.7976 without restraints) Performing minimization step: 2177. Total energy = 3495.2967 kcal/mol (3487.6530 without restraints) Performing minimization step: 2178. Total energy = 3495.1443 kcal/mol (3487.4993 without restraints) Performing minimization step: 2179. Total energy = 3494.9942 kcal/mol (3487.3544 without restraints) Performing minimization step: 2180. Total energy = 3494.8423 kcal/mol (3487.2012 without restraints) Performing minimization step: 2181. Total energy = 3494.6924 kcal/mol (3487.0566 without restraints) Performing minimization step: 2182. Total energy = 3494.5410 kcal/mol (3486.9039 without restraints) Performing minimization step: 2183. Total energy = 3494.3913 kcal/mol (3486.7596 without restraints) Performing minimization step: 2184. Total energy = 3494.2400 kcal/mol (3486.6070 without restraints) Performing minimization step: 2185. Total energy = 3494.0909 kcal/mol (3486.4632 without restraints) Performing minimization step: 2186. Total energy = 3493.9399 kcal/mol (3486.3108 without restraints) Performing minimization step: 2187. Total energy = 3493.7910 kcal/mol (3486.1672 without restraints) Performing minimization step: 2188. Total energy = 3493.6404 kcal/mol (3486.0153 without restraints) Performing minimization step: 2189. Total energy = 3493.4915 kcal/mol (3485.8717 without restraints) Performing minimization step: 2190. Total energy = 3493.3412 kcal/mol (3485.7200 without restraints) Performing minimization step: 2191. Total energy = 3493.1926 kcal/mol (3485.5767 without restraints) Performing minimization step: 2192. Total energy = 3493.0424 kcal/mol (3485.4253 without restraints) Performing minimization step: 2193. Total energy = 3492.8942 kcal/mol (3485.2825 without restraints) Performing minimization step: 2194. Total energy = 3492.7444 kcal/mol (3485.1313 without restraints) Performing minimization step: 2195. Total energy = 3492.5965 kcal/mol (3484.9887 without restraints) Performing minimization step: 2196. Total energy = 3492.4467 kcal/mol (3484.8375 without restraints) Performing minimization step: 2197. Total energy = 3492.2991 kcal/mol (3484.6952 without restraints) Performing minimization step: 2198. Total energy = 3492.1494 kcal/mol (3484.5442 without restraints) Performing minimization step: 2199. Total energy = 3492.0015 kcal/mol (3484.4013 without restraints) Performing minimization step: 2200. Total energy = 3491.8522 kcal/mol (3484.2509 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e0aaf9ce/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 2201. Total energy = 3491.7047 kcal/mol (3484.1089 without restraints) Performing minimization step: 2202. Total energy = 3491.5561 kcal/mol (3483.9588 without restraints) Performing minimization step: 2203. Total energy = 3491.4096 kcal/mol (3483.8177 without restraints) Performing minimization step: 2204. Total energy = 3491.2608 kcal/mol (3483.6674 without restraints) Performing minimization step: 2205. Total energy = 3491.1139 kcal/mol (3483.5259 without restraints) Performing minimization step: 2206. Total energy = 3490.9655 kcal/mol (3483.3760 without restraints) Performing minimization step: 2207. Total energy = 3490.8184 kcal/mol (3483.2343 without restraints) Performing minimization step: 2208. Total energy = 3490.6699 kcal/mol (3483.0844 without restraints) Performing minimization step: 2209. Total energy = 3490.5238 kcal/mol (3482.9436 without restraints) Performing minimization step: 2210. Total energy = 3490.3758 kcal/mol (3482.7941 without restraints) Performing minimization step: 2211. Total energy = 3490.2306 kcal/mol (3482.6544 without restraints) Performing minimization step: 2212. Total energy = 3490.0827 kcal/mol (3482.5050 without restraints) Performing minimization step: 2213. Total energy = 3489.9370 kcal/mol (3482.3645 without restraints) Performing minimization step: 2214. Total energy = 3489.7889 kcal/mol (3482.2150 without restraints) Performing minimization step: 2215. Total energy = 3489.6435 kcal/mol (3482.0751 without restraints) Performing minimization step: 2216. Total energy = 3489.4961 kcal/mol (3481.9262 without restraints) Performing minimization step: 2217. Total energy = 3489.3510 kcal/mol (3481.7865 without restraints) Performing minimization step: 2218. Total energy = 3489.2037 kcal/mol (3481.6377 without restraints) Performing minimization step: 2219. Total energy = 3489.0588 kcal/mol (3481.4981 without restraints) Performing minimization step: 2220. Total energy = 3488.9117 kcal/mol (3481.3496 without restraints) Performing minimization step: 2221. Total energy = 3488.7672 kcal/mol (3481.2104 without restraints) Performing minimization step: 2222. Total energy = 3488.6202 kcal/mol (3481.0619 without restraints) Performing minimization step: 2223. Total energy = 3488.4758 kcal/mol (3480.9230 without restraints) Performing minimization step: 2224. Total energy = 3488.3294 kcal/mol (3480.7750 without restraints) Performing minimization step: 2225. Total energy = 3488.1851 kcal/mol (3480.6362 without restraints) Performing minimization step: 2226. Total energy = 3488.0388 kcal/mol (3480.4884 without restraints) Performing minimization step: 2227. Total energy = 3487.8949 kcal/mol (3480.3499 without restraints) Performing minimization step: 2228. Total energy = 3487.7489 kcal/mol (3480.2023 without restraints) Performing minimization step: 2229. Total energy = 3487.6053 kcal/mol (3480.0641 without restraints) Performing minimization step: 2230. Total energy = 3487.4593 kcal/mol (3479.9165 without restraints) Performing minimization step: 2231. Total energy = 3487.3159 kcal/mol (3479.7786 without restraints) Performing minimization step: 2232. Total energy = 3487.1707 kcal/mol (3479.6318 without restraints) Performing minimization step: 2233. Total energy = 3487.0268 kcal/mol (3479.4932 without restraints) Performing minimization step: 2234. Total energy = 3486.8816 kcal/mol (3479.3465 without restraints) Performing minimization step: 2235. Total energy = 3486.7386 kcal/mol (3479.2091 without restraints) Performing minimization step: 2236. Total energy = 3486.5942 kcal/mol (3479.0630 without restraints) Performing minimization step: 2237. Total energy = 3486.4513 kcal/mol (3478.9255 without restraints) Performing minimization step: 2238. Total energy = 3486.3069 kcal/mol (3478.7794 without restraints) Performing minimization step: 2239. Total energy = 3486.1642 kcal/mol (3478.6422 without restraints) Performing minimization step: 2240. Total energy = 3486.0198 kcal/mol (3478.4962 without restraints) Performing minimization step: 2241. Total energy = 3485.8773 kcal/mol (3478.3592 without restraints) Performing minimization step: 2242. Total energy = 3485.7334 kcal/mol (3478.2136 without restraints) Performing minimization step: 2243. Total energy = 3485.5914 kcal/mol (3478.0771 without restraints) Performing minimization step: 2244. Total energy = 3485.4477 kcal/mol (3477.9318 without restraints) Performing minimization step: 2245. Total energy = 3485.3055 kcal/mol (3477.7950 without restraints) Performing minimization step: 2246. Total energy = 3485.1618 kcal/mol (3477.6498 without restraints) Performing minimization step: 2247. Total energy = 3485.0204 kcal/mol (3477.5137 without restraints) Performing minimization step: 2248. Total energy = 3484.8766 kcal/mol (3477.3683 without restraints) Performing minimization step: 2249. Total energy = 3484.7348 kcal/mol (3477.2319 without restraints) Performing minimization step: 2250. Total energy = 3484.5908 kcal/mol (3477.0863 without restraints) Performing minimization step: 2251. Total energy = 3484.4492 kcal/mol (3476.9501 without restraints) Performing minimization step: 2252. Total energy = 3484.3056 kcal/mol (3476.8046 without restraints) Performing minimization step: 2253. Total energy = 3484.1645 kcal/mol (3476.6692 without restraints) Performing minimization step: 2254. Total energy = 3484.0213 kcal/mol (3476.5244 without restraints) Performing minimization step: 2255. Total energy = 3483.8800 kcal/mol (3476.3884 without restraints) Performing minimization step: 2256. Total energy = 3483.7370 kcal/mol (3476.2438 without restraints) Performing minimization step: 2257. Total energy = 3483.5961 kcal/mol (3476.1083 without restraints) Performing minimization step: 2258. Total energy = 3483.4534 kcal/mol (3475.9640 without restraints) Performing minimization step: 2259. Total energy = 3483.3123 kcal/mol (3475.8283 without restraints) Performing minimization step: 2260. Total energy = 3483.1699 kcal/mol (3475.6843 without restraints) Performing minimization step: 2261. Total energy = 3483.0288 kcal/mol (3475.5486 without restraints) Performing minimization step: 2262. Total energy = 3482.8862 kcal/mol (3475.4043 without restraints) Performing minimization step: 2263. Total energy = 3482.7459 kcal/mol (3475.2695 without restraints) Performing minimization step: 2264. Total energy = 3482.6040 kcal/mol (3475.1256 without restraints) Performing minimization step: 2265. Total energy = 3482.4640 kcal/mol (3474.9912 without restraints) Performing minimization step: 2266. Total energy = 3482.3220 kcal/mol (3474.8477 without restraints) Performing minimization step: 2267. Total energy = 3482.1825 kcal/mol (3474.7136 without restraints) Performing minimization step: 2268. Total energy = 3482.0410 kcal/mol (3474.5704 without restraints) Performing minimization step: 2269. Total energy = 3481.9019 kcal/mol (3474.4367 without restraints) Performing minimization step: 2270. Total energy = 3481.7602 kcal/mol (3474.2933 without restraints) Performing minimization step: 2271. Total energy = 3481.6208 kcal/mol (3474.1594 without restraints) Performing minimization step: 2272. Total energy = 3481.4797 kcal/mol (3474.0166 without restraints) Performing minimization step: 2273. Total energy = 3481.3406 kcal/mol (3473.8829 without restraints) Performing minimization step: 2274. Total energy = 3481.2000 kcal/mol (3473.7406 without restraints) Performing minimization step: 2275. Total energy = 3481.0612 kcal/mol (3473.6072 without restraints) Performing minimization step: 2276. Total energy = 3480.9207 kcal/mol (3473.4651 without restraints) Performing minimization step: 2277. Total energy = 3480.7820 kcal/mol (3473.3318 without restraints) Performing minimization step: 2278. Total energy = 3480.6417 kcal/mol (3473.1898 without restraints) Performing minimization step: 2279. Total energy = 3480.5029 kcal/mol (3473.0562 without restraints) Performing minimization step: 2280. Total energy = 3480.3622 kcal/mol (3472.9139 without restraints) Performing minimization step: 2281. Total energy = 3480.2234 kcal/mol (3472.7807 without restraints) Performing minimization step: 2282. Total energy = 3480.0840 kcal/mol (3472.6395 without restraints) Performing minimization step: 2283. Total energy = 3479.9456 kcal/mol (3472.5064 without restraints) Performing minimization step: 2284. Total energy = 3479.8056 kcal/mol (3472.3648 without restraints) Performing minimization step: 2285. Total energy = 3479.6678 kcal/mol (3472.2325 without restraints) Performing minimization step: 2286. Total energy = 3479.5281 kcal/mol (3472.0910 without restraints) Performing minimization step: 2287. Total energy = 3479.3896 kcal/mol (3471.9580 without restraints) Performing minimization step: 2288. Total energy = 3479.2502 kcal/mol (3471.8168 without restraints) Performing minimization step: 2289. Total energy = 3479.1131 kcal/mol (3471.6851 without restraints) Performing minimization step: 2290. Total energy = 3478.9740 kcal/mol (3471.5440 without restraints) Performing minimization step: 2291. Total energy = 3478.8364 kcal/mol (3471.4122 without restraints) Performing minimization step: 2292. Total energy = 3478.6977 kcal/mol (3471.2715 without restraints) Performing minimization step: 2293. Total energy = 3478.5605 kcal/mol (3471.1398 without restraints) Performing minimization step: 2294. Total energy = 3478.4217 kcal/mol (3470.9992 without restraints) Performing minimization step: 2295. Total energy = 3478.2849 kcal/mol (3470.8679 without restraints) Performing minimization step: 2296. Total energy = 3478.1462 kcal/mol (3470.7275 without restraints) Performing minimization step: 2297. Total energy = 3478.0097 kcal/mol (3470.5964 without restraints) Performing minimization step: 2298. Total energy = 3477.8709 kcal/mol (3470.4559 without restraints) Performing minimization step: 2299. Total energy = 3477.7347 kcal/mol (3470.3251 without restraints) Performing minimization step: 2300. Total energy = 3477.5966 kcal/mol (3470.1852 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e0aaf9ce/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 2301. Total energy = 3477.4603 kcal/mol (3470.0543 without restraints) Performing minimization step: 2302. Total energy = 3477.3220 kcal/mol (3469.9142 without restraints) Performing minimization step: 2303. Total energy = 3477.1859 kcal/mol (3469.7838 without restraints) Performing minimization step: 2304. Total energy = 3477.0481 kcal/mol (3469.6440 without restraints) Performing minimization step: 2305. Total energy = 3476.9120 kcal/mol (3469.5134 without restraints) Performing minimization step: 2306. Total energy = 3476.7742 kcal/mol (3469.3736 without restraints) Performing minimization step: 2307. Total energy = 3476.6387 kcal/mol (3469.2437 without restraints) Performing minimization step: 2308. Total energy = 3476.5012 kcal/mol (3469.1041 without restraints) Performing minimization step: 2309. Total energy = 3476.3649 kcal/mol (3468.9735 without restraints) Performing minimization step: 2310. Total energy = 3476.2273 kcal/mol (3468.8339 without restraints) Performing minimization step: 2311. Total energy = 3476.0924 kcal/mol (3468.7048 without restraints) Performing minimization step: 2312. Total energy = 3475.9556 kcal/mol (3468.5661 without restraints) Performing minimization step: 2313. Total energy = 3475.8208 kcal/mol (3468.4367 without restraints) Performing minimization step: 2314. Total energy = 3475.6838 kcal/mol (3468.2978 without restraints) Performing minimization step: 2315. Total energy = 3475.5491 kcal/mol (3468.1686 without restraints) Performing minimization step: 2316. Total energy = 3475.4121 kcal/mol (3468.0297 without restraints) Performing minimization step: 2317. Total energy = 3475.2770 kcal/mol (3467.9001 without restraints) Performing minimization step: 2318. Total energy = 3475.1404 kcal/mol (3467.7614 without restraints) Performing minimization step: 2319. Total energy = 3475.0061 kcal/mol (3467.6329 without restraints) Performing minimization step: 2320. Total energy = 3474.8697 kcal/mol (3467.4945 without restraints) Performing minimization step: 2321. Total energy = 3474.7354 kcal/mol (3467.3657 without restraints) Performing minimization step: 2322. Total energy = 3474.5992 kcal/mol (3467.2276 without restraints) Performing minimization step: 2323. Total energy = 3474.4663 kcal/mol (3467.1003 without restraints) Performing minimization step: 2324. Total energy = 3474.3304 kcal/mol (3466.9624 without restraints) Performing minimization step: 2325. Total energy = 3474.1966 kcal/mol (3466.8342 without restraints) Performing minimization step: 2326. Total energy = 3474.0608 kcal/mol (3466.6962 without restraints) Performing minimization step: 2327. Total energy = 3473.9272 kcal/mol (3466.5683 without restraints) Performing minimization step: 2328. Total energy = 3473.7918 kcal/mol (3466.4310 without restraints) Performing minimization step: 2329. Total energy = 3473.6586 kcal/mol (3466.3032 without restraints) Performing minimization step: 2330. Total energy = 3473.5233 kcal/mol (3466.1660 without restraints) Performing minimization step: 2331. Total energy = 3473.3900 kcal/mol (3466.0383 without restraints) Performing minimization step: 2332. Total energy = 3473.2546 kcal/mol (3465.9009 without restraints) Performing minimization step: 2333. Total energy = 3473.1210 kcal/mol (3465.7728 without restraints) Performing minimization step: 2334. Total energy = 3472.9855 kcal/mol (3465.6354 without restraints) Performing minimization step: 2335. Total energy = 3472.8526 kcal/mol (3465.5080 without restraints) Performing minimization step: 2336. Total energy = 3472.7183 kcal/mol (3465.3716 without restraints) Performing minimization step: 2337. Total energy = 3472.5857 kcal/mol (3465.2448 without restraints) Performing minimization step: 2338. Total energy = 3472.4510 kcal/mol (3465.1079 without restraints) Performing minimization step: 2339. Total energy = 3472.3186 kcal/mol (3464.9812 without restraints) Performing minimization step: 2340. Total energy = 3472.1845 kcal/mol (3464.8449 without restraints) Performing minimization step: 2341. Total energy = 3472.0522 kcal/mol (3464.7183 without restraints) Performing minimization step: 2342. Total energy = 3471.9180 kcal/mol (3464.5820 without restraints) Performing minimization step: 2343. Total energy = 3471.7859 kcal/mol (3464.4556 without restraints) Performing minimization step: 2344. Total energy = 3471.6516 kcal/mol (3464.3192 without restraints) Performing minimization step: 2345. Total energy = 3471.5196 kcal/mol (3464.1928 without restraints) Performing minimization step: 2346. Total energy = 3471.3855 kcal/mol (3464.0567 without restraints) Performing minimization step: 2347. Total energy = 3471.2539 kcal/mol (3463.9305 without restraints) Performing minimization step: 2348. Total energy = 3471.1199 kcal/mol (3463.7945 without restraints) Performing minimization step: 2349. Total energy = 3470.9882 kcal/mol (3463.6685 without restraints) Performing minimization step: 2350. Total energy = 3470.8548 kcal/mol (3463.5330 without restraints) Performing minimization step: 2351. Total energy = 3470.7234 kcal/mol (3463.4072 without restraints) Performing minimization step: 2352. Total energy = 3470.5898 kcal/mol (3463.2715 without restraints) Performing minimization step: 2353. Total energy = 3470.4587 kcal/mol (3463.1460 without restraints) Performing minimization step: 2354. Total energy = 3470.3255 kcal/mol (3463.0107 without restraints) Performing minimization step: 2355. Total energy = 3470.1944 kcal/mol (3462.8852 without restraints) Performing minimization step: 2356. Total energy = 3470.0616 kcal/mol (3462.7503 without restraints) Performing minimization step: 2357. Total energy = 3469.9311 kcal/mol (3462.6256 without restraints) Performing minimization step: 2358. Total energy = 3469.7980 kcal/mol (3462.4900 without restraints) Performing minimization step: 2359. Total energy = 3469.6669 kcal/mol (3462.3647 without restraints) Performing minimization step: 2360. Total energy = 3469.5337 kcal/mol (3462.2293 without restraints) Performing minimization step: 2361. Total energy = 3469.4032 kcal/mol (3462.1045 without restraints) Performing minimization step: 2362. Total energy = 3469.2705 kcal/mol (3461.9697 without restraints) Performing minimization step: 2363. Total energy = 3469.1391 kcal/mol (3461.8440 without restraints) Performing minimization step: 2364. Total energy = 3469.0065 kcal/mol (3461.7091 without restraints) Performing minimization step: 2365. Total energy = 3468.8764 kcal/mol (3461.5847 without restraints) Performing minimization step: 2366. Total energy = 3468.7442 kcal/mol (3461.4503 without restraints) Performing minimization step: 2367. Total energy = 3468.6146 kcal/mol (3461.3264 without restraints) Performing minimization step: 2368. Total energy = 3468.4826 kcal/mol (3461.1923 without restraints) Performing minimization step: 2369. Total energy = 3468.3531 kcal/mol (3461.0684 without restraints) Performing minimization step: 2370. Total energy = 3468.2208 kcal/mol (3460.9336 without restraints) Performing minimization step: 2371. Total energy = 3468.0910 kcal/mol (3460.8097 without restraints) Performing minimization step: 2372. Total energy = 3467.9593 kcal/mol (3460.6757 without restraints) Performing minimization step: 2373. Total energy = 3467.8295 kcal/mol (3460.5518 without restraints) Performing minimization step: 2374. Total energy = 3467.6981 kcal/mol (3460.4181 without restraints) Performing minimization step: 2375. Total energy = 3467.5682 kcal/mol (3460.2939 without restraints) Performing minimization step: 2376. Total energy = 3467.4361 kcal/mol (3460.1596 without restraints) Performing minimization step: 2377. Total energy = 3467.3070 kcal/mol (3460.0361 without restraints) Performing minimization step: 2378. Total energy = 3467.1757 kcal/mol (3459.9026 without restraints) Performing minimization step: 2379. Total energy = 3467.0471 kcal/mol (3459.7797 without restraints) Performing minimization step: 2380. Total energy = 3466.9165 kcal/mol (3459.6469 without restraints) Performing minimization step: 2381. Total energy = 3466.7877 kcal/mol (3459.5237 without restraints) Performing minimization step: 2382. Total energy = 3466.6569 kcal/mol (3459.3908 without restraints) Performing minimization step: 2383. Total energy = 3466.5284 kcal/mol (3459.2677 without restraints) Performing minimization step: 2384. Total energy = 3466.3977 kcal/mol (3459.1351 without restraints) Performing minimization step: 2385. Total energy = 3466.2694 kcal/mol (3459.0122 without restraints) Performing minimization step: 2386. Total energy = 3466.1388 kcal/mol (3458.8795 without restraints) Performing minimization step: 2387. Total energy = 3466.0102 kcal/mol (3458.7566 without restraints) Performing minimization step: 2388. Total energy = 3465.8799 kcal/mol (3458.6240 without restraints) Performing minimization step: 2389. Total energy = 3465.7519 kcal/mol (3458.5017 without restraints) Performing minimization step: 2390. Total energy = 3465.6216 kcal/mol (3458.3691 without restraints) Performing minimization step: 2391. Total energy = 3465.4935 kcal/mol (3458.2467 without restraints) Performing minimization step: 2392. Total energy = 3465.3636 kcal/mol (3458.1145 without restraints) Performing minimization step: 2393. Total energy = 3465.2357 kcal/mol (3457.9924 without restraints) Performing minimization step: 2394. Total energy = 3465.1056 kcal/mol (3457.8599 without restraints) Performing minimization step: 2395. Total energy = 3464.9781 kcal/mol (3457.7381 without restraints) Performing minimization step: 2396. Total energy = 3464.8486 kcal/mol (3457.6064 without restraints) Performing minimization step: 2397. Total energy = 3464.7215 kcal/mol (3457.4849 without restraints) Performing minimization step: 2398. Total energy = 3464.5921 kcal/mol (3457.3533 without restraints) Performing minimization step: 2399. Total energy = 3464.4647 kcal/mol (3457.2316 without restraints) Performing minimization step: 2400. Total energy = 3464.3358 kcal/mol (3457.1004 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e0aaf9ce/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 2401. Total energy = 3464.2091 kcal/mol (3456.9793 without restraints) Performing minimization step: 2402. Total energy = 3464.0794 kcal/mol (3456.8474 without restraints) Performing minimization step: 2403. Total energy = 3463.9529 kcal/mol (3456.7267 without restraints) Performing minimization step: 2404. Total energy = 3463.8242 kcal/mol (3456.5956 without restraints) Performing minimization step: 2405. Total energy = 3463.6972 kcal/mol (3456.4743 without restraints) Performing minimization step: 2406. Total energy = 3463.5684 kcal/mol (3456.3432 without restraints) Performing minimization step: 2407. Total energy = 3463.4422 kcal/mol (3456.2225 without restraints) Performing minimization step: 2408. Total energy = 3463.3133 kcal/mol (3456.0915 without restraints) Performing minimization step: 2409. Total energy = 3463.1868 kcal/mol (3455.9705 without restraints) Performing minimization step: 2410. Total energy = 3463.0585 kcal/mol (3455.8401 without restraints) Performing minimization step: 2411. Total energy = 3462.9322 kcal/mol (3455.7194 without restraints) Performing minimization step: 2412. Total energy = 3462.8040 kcal/mol (3455.5889 without restraints) Performing minimization step: 2413. Total energy = 3462.6776 kcal/mol (3455.4681 without restraints) Performing minimization step: 2414. Total energy = 3462.5492 kcal/mol (3455.3374 without restraints) Performing minimization step: 2415. Total energy = 3462.4232 kcal/mol (3455.2171 without restraints) Performing minimization step: 2416. Total energy = 3462.2948 kcal/mol (3455.0864 without restraints) Performing minimization step: 2417. Total energy = 3462.1687 kcal/mol (3454.9660 without restraints) Performing minimization step: 2418. Total energy = 3462.0408 kcal/mol (3454.8357 without restraints) Performing minimization step: 2419. Total energy = 3461.9151 kcal/mol (3454.7158 without restraints) Performing minimization step: 2420. Total energy = 3461.7873 kcal/mol (3454.5857 without restraints) Performing minimization step: 2421. Total energy = 3461.6620 kcal/mol (3454.4660 without restraints) Performing minimization step: 2422. Total energy = 3461.5344 kcal/mol (3454.3361 without restraints) Performing minimization step: 2423. Total energy = 3461.4090 kcal/mol (3454.2164 without restraints) Performing minimization step: 2424. Total energy = 3461.2815 kcal/mol (3454.0865 without restraints) Performing minimization step: 2425. Total energy = 3461.1568 kcal/mol (3453.9674 without restraints) Performing minimization step: 2426. Total energy = 3461.0295 kcal/mol (3453.8379 without restraints) Performing minimization step: 2427. Total energy = 3460.9049 kcal/mol (3453.7189 without restraints) Performing minimization step: 2428. Total energy = 3460.7766 kcal/mol (3453.5881 without restraints) Performing minimization step: 2429. Total energy = 3460.6516 kcal/mol (3453.4689 without restraints) Performing minimization step: 2430. Total energy = 3460.5247 kcal/mol (3453.3397 without restraints) Performing minimization step: 2431. Total energy = 3460.4001 kcal/mol (3453.2209 without restraints) Performing minimization step: 2432. Total energy = 3460.2734 kcal/mol (3453.0917 without restraints) Performing minimization step: 2433. Total energy = 3460.1489 kcal/mol (3452.9729 without restraints) Performing minimization step: 2434. Total energy = 3460.0222 kcal/mol (3452.8439 without restraints) Performing minimization step: 2435. Total energy = 3459.8979 kcal/mol (3452.7252 without restraints) Performing minimization step: 2436. Total energy = 3459.7707 kcal/mol (3452.5956 without restraints) Performing minimization step: 2437. Total energy = 3459.6463 kcal/mol (3452.4769 without restraints) Performing minimization step: 2438. Total energy = 3459.5199 kcal/mol (3452.3482 without restraints) Performing minimization step: 2439. Total energy = 3459.3959 kcal/mol (3452.2299 without restraints) Performing minimization step: 2440. Total energy = 3459.2690 kcal/mol (3452.1004 without restraints) Performing minimization step: 2441. Total energy = 3459.1451 kcal/mol (3451.9824 without restraints) Performing minimization step: 2442. Total energy = 3459.0187 kcal/mol (3451.8535 without restraints) Performing minimization step: 2443. Total energy = 3458.8948 kcal/mol (3451.7353 without restraints) Performing minimization step: 2444. Total energy = 3458.7690 kcal/mol (3451.6072 without restraints) Performing minimization step: 2445. Total energy = 3458.6446 kcal/mol (3451.4884 without restraints) Performing minimization step: 2446. Total energy = 3458.5187 kcal/mol (3451.3602 without restraints) Performing minimization step: 2447. Total energy = 3458.3953 kcal/mol (3451.2423 without restraints) Performing minimization step: 2448. Total energy = 3458.2695 kcal/mol (3451.1142 without restraints) Performing minimization step: 2449. Total energy = 3458.1462 kcal/mol (3450.9966 without restraints) Performing minimization step: 2450. Total energy = 3458.0209 kcal/mol (3450.8689 without restraints) Performing minimization step: 2451. Total energy = 3457.8975 kcal/mol (3450.7512 without restraints) Performing minimization step: 2452. Total energy = 3457.7720 kcal/mol (3450.6233 without restraints) Performing minimization step: 2453. Total energy = 3457.6486 kcal/mol (3450.5054 without restraints) Performing minimization step: 2454. Total energy = 3457.5234 kcal/mol (3450.3780 without restraints) Performing minimization step: 2455. Total energy = 3457.4008 kcal/mol (3450.2611 without restraints) Performing minimization step: 2456. Total energy = 3457.2756 kcal/mol (3450.1335 without restraints) Performing minimization step: 2457. Total energy = 3457.1532 kcal/mol (3450.0167 without restraints) Performing minimization step: 2458. Total energy = 3457.0283 kcal/mol (3449.8895 without restraints) Performing minimization step: 2459. Total energy = 3456.9059 kcal/mol (3449.7727 without restraints) Performing minimization step: 2460. Total energy = 3456.7805 kcal/mol (3449.6448 without restraints) Performing minimization step: 2461. Total energy = 3456.6580 kcal/mol (3449.5280 without restraints) Performing minimization step: 2462. Total energy = 3456.5331 kcal/mol (3449.4008 without restraints) Performing minimization step: 2463. Total energy = 3456.4110 kcal/mol (3449.2843 without restraints) Performing minimization step: 2464. Total energy = 3456.2864 kcal/mol (3449.1573 without restraints) Performing minimization step: 2465. Total energy = 3456.1644 kcal/mol (3449.0411 without restraints) Performing minimization step: 2466. Total energy = 3456.0398 kcal/mol (3448.9139 without restraints) Performing minimization step: 2467. Total energy = 3455.9178 kcal/mol (3448.7976 without restraints) Performing minimization step: 2468. Total energy = 3455.7933 kcal/mol (3448.6707 without restraints) Performing minimization step: 2469. Total energy = 3455.6715 kcal/mol (3448.5545 without restraints) Performing minimization step: 2470. Total energy = 3455.5474 kcal/mol (3448.4280 without restraints) Performing minimization step: 2471. Total energy = 3455.4257 kcal/mol (3448.3120 without restraints) Performing minimization step: 2472. Total energy = 3455.3022 kcal/mol (3448.1860 without restraints) Performing minimization step: 2473. Total energy = 3455.1808 kcal/mol (3448.0704 without restraints) Performing minimization step: 2474. Total energy = 3455.0570 kcal/mol (3447.9441 without restraints) Performing minimization step: 2475. Total energy = 3454.9353 kcal/mol (3447.8280 without restraints) Performing minimization step: 2476. Total energy = 3454.8113 kcal/mol (3447.7015 without restraints) Performing minimization step: 2477. Total energy = 3454.6902 kcal/mol (3447.5862 without restraints) Performing minimization step: 2478. Total energy = 3454.5666 kcal/mol (3447.4601 without restraints) Performing minimization step: 2479. Total energy = 3454.4450 kcal/mol (3447.3441 without restraints) Performing minimization step: 2480. Total energy = 3454.3212 kcal/mol (3447.2177 without restraints) Performing minimization step: 2481. Total energy = 3454.2001 kcal/mol (3447.1025 without restraints) Performing minimization step: 2482. Total energy = 3454.0764 kcal/mol (3446.9763 without restraints) Performing minimization step: 2483. Total energy = 3453.9555 kcal/mol (3446.8612 without restraints) Performing minimization step: 2484. Total energy = 3453.8318 kcal/mol (3446.7350 without restraints) Performing minimization step: 2485. Total energy = 3453.7115 kcal/mol (3446.6205 without restraints) Performing minimization step: 2486. Total energy = 3453.5886 kcal/mol (3446.4948 without restraints) Performing minimization step: 2487. Total energy = 3453.4683 kcal/mol (3446.3803 without restraints) Performing minimization step: 2488. Total energy = 3453.3455 kcal/mol (3446.2551 without restraints) Performing minimization step: 2489. Total energy = 3453.2253 kcal/mol (3446.1406 without restraints) Performing minimization step: 2490. Total energy = 3453.1029 kcal/mol (3446.0156 without restraints) Performing minimization step: 2491. Total energy = 3452.9824 kcal/mol (3445.9008 without restraints) Performing minimization step: 2492. Total energy = 3452.8594 kcal/mol (3445.7752 without restraints) Performing minimization step: 2493. Total energy = 3452.7391 kcal/mol (3445.6607 without restraints) Performing minimization step: 2494. Total energy = 3452.6166 kcal/mol (3445.5357 without restraints) Performing minimization step: 2495. Total energy = 3452.4968 kcal/mol (3445.4215 without restraints) Performing minimization step: 2496. Total energy = 3452.3739 kcal/mol (3445.2961 without restraints) Performing minimization step: 2497. Total energy = 3452.2539 kcal/mol (3445.1818 without restraints) Performing minimization step: 2498. Total energy = 3452.1310 kcal/mol (3445.0564 without restraints) Performing minimization step: 2499. Total energy = 3452.0112 kcal/mol (3444.9424 without restraints) Performing minimization step: 2500. Total energy = 3451.8892 kcal/mol (3444.8178 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e0aaf9ce/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 2501. Total energy = 3451.7696 kcal/mol (3444.7040 without restraints) Performing minimization step: 2502. Total energy = 3451.6477 kcal/mol (3444.5795 without restraints) Performing minimization step: 2503. Total energy = 3451.5280 kcal/mol (3444.4654 without restraints) Performing minimization step: 2504. Total energy = 3451.4057 kcal/mol (3444.3406 without restraints) Performing minimization step: 2505. Total energy = 3451.2857 kcal/mol (3444.2263 without restraints) Performing minimization step: 2506. Total energy = 3451.1640 kcal/mol (3444.1020 without restraints) Performing minimization step: 2507. Total energy = 3451.0444 kcal/mol (3443.9883 without restraints) Performing minimization step: 2508. Total energy = 3450.9229 kcal/mol (3443.8642 without restraints) Performing minimization step: 2509. Total energy = 3450.8044 kcal/mol (3443.7514 without restraints) Performing minimization step: 2510. Total energy = 3450.6830 kcal/mol (3443.6273 without restraints) Performing minimization step: 2511. Total energy = 3450.5639 kcal/mol (3443.5140 without restraints) Performing minimization step: 2512. Total energy = 3450.4422 kcal/mol (3443.3895 without restraints) Performing minimization step: 2513. Total energy = 3450.3231 kcal/mol (3443.2763 without restraints) Performing minimization step: 2514. Total energy = 3450.2017 kcal/mol (3443.1524 without restraints) Performing minimization step: 2515. Total energy = 3450.0829 kcal/mol (3443.0394 without restraints) Performing minimization step: 2516. Total energy = 3449.9617 kcal/mol (3442.9155 without restraints) Performing minimization step: 2517. Total energy = 3449.8431 kcal/mol (3442.8027 without restraints) Performing minimization step: 2518. Total energy = 3449.7223 kcal/mol (3442.6793 without restraints) Performing minimization step: 2519. Total energy = 3449.6037 kcal/mol (3442.5664 without restraints) Performing minimization step: 2520. Total energy = 3449.4828 kcal/mol (3442.4429 without restraints) Performing minimization step: 2521. Total energy = 3449.3648 kcal/mol (3442.3306 without restraints) Performing minimization step: 2522. Total energy = 3449.2442 kcal/mol (3442.2074 without restraints) Performing minimization step: 2523. Total energy = 3449.1260 kcal/mol (3442.0949 without restraints) Performing minimization step: 2524. Total energy = 3449.0055 kcal/mol (3441.9719 without restraints) Performing minimization step: 2525. Total energy = 3448.8875 kcal/mol (3441.8596 without restraints) Performing minimization step: 2526. Total energy = 3448.7676 kcal/mol (3441.7370 without restraints) Performing minimization step: 2527. Total energy = 3448.6499 kcal/mol (3441.6250 without restraints) Performing minimization step: 2528. Total energy = 3448.5293 kcal/mol (3441.5019 without restraints) Performing minimization step: 2529. Total energy = 3448.4120 kcal/mol (3441.3903 without restraints) Performing minimization step: 2530. Total energy = 3448.2916 kcal/mol (3441.2673 without restraints) Performing minimization step: 2531. Total energy = 3448.1738 kcal/mol (3441.1553 without restraints) Performing minimization step: 2532. Total energy = 3448.0538 kcal/mol (3441.0326 without restraints) Performing minimization step: 2533. Total energy = 3447.9362 kcal/mol (3440.9208 without restraints) Performing minimization step: 2534. Total energy = 3447.8163 kcal/mol (3440.7980 without restraints) Performing minimization step: 2535. Total energy = 3447.6987 kcal/mol (3440.6863 without restraints) Performing minimization step: 2536. Total energy = 3447.5787 kcal/mol (3440.5636 without restraints) Performing minimization step: 2537. Total energy = 3447.4613 kcal/mol (3440.4520 without restraints) Performing minimization step: 2538. Total energy = 3447.3415 kcal/mol (3440.3297 without restraints) Performing minimization step: 2539. Total energy = 3447.2248 kcal/mol (3440.2186 without restraints) Performing minimization step: 2540. Total energy = 3447.1050 kcal/mol (3440.0961 without restraints) Performing minimization step: 2541. Total energy = 3446.9878 kcal/mol (3439.9846 without restraints) Performing minimization step: 2542. Total energy = 3446.8680 kcal/mol (3439.8623 without restraints) Performing minimization step: 2543. Total energy = 3446.7511 kcal/mol (3439.7511 without restraints) Performing minimization step: 2544. Total energy = 3446.6320 kcal/mol (3439.6293 without restraints) Performing minimization step: 2545. Total energy = 3446.5150 kcal/mol (3439.5180 without restraints) Performing minimization step: 2546. Total energy = 3446.3958 kcal/mol (3439.3962 without restraints) Performing minimization step: 2547. Total energy = 3446.2794 kcal/mol (3439.2855 without restraints) Performing minimization step: 2548. Total energy = 3446.1603 kcal/mol (3439.1637 without restraints) Performing minimization step: 2549. Total energy = 3446.0439 kcal/mol (3439.0531 without restraints) Performing minimization step: 2550. Total energy = 3445.9250 kcal/mol (3438.9315 without restraints) Performing minimization step: 2551. Total energy = 3445.8085 kcal/mol (3438.8208 without restraints) Performing minimization step: 2552. Total energy = 3445.6892 kcal/mol (3438.6988 without restraints) Performing minimization step: 2553. Total energy = 3445.5730 kcal/mol (3438.5883 without restraints) Performing minimization step: 2554. Total energy = 3445.4545 kcal/mol (3438.4671 without restraints) Performing minimization step: 2555. Total energy = 3445.3382 kcal/mol (3438.3566 without restraints) Performing minimization step: 2556. Total energy = 3445.2194 kcal/mol (3438.2352 without restraints) Performing minimization step: 2557. Total energy = 3445.1031 kcal/mol (3438.1246 without restraints) Performing minimization step: 2558. Total energy = 3444.9846 kcal/mol (3438.0032 without restraints) Performing minimization step: 2559. Total energy = 3444.8684 kcal/mol (3437.8928 without restraints) Performing minimization step: 2560. Total energy = 3444.7497 kcal/mol (3437.7715 without restraints) Performing minimization step: 2561. Total energy = 3444.6340 kcal/mol (3437.6616 without restraints) Performing minimization step: 2562. Total energy = 3444.5163 kcal/mol (3437.5412 without restraints) Performing minimization step: 2563. Total energy = 3444.4005 kcal/mol (3437.4311 without restraints) Performing minimization step: 2564. Total energy = 3444.2819 kcal/mol (3437.3098 without restraints) Performing minimization step: 2565. Total energy = 3444.1663 kcal/mol (3437.1999 without restraints) Performing minimization step: 2566. Total energy = 3444.0481 kcal/mol (3437.0790 without restraints) Performing minimization step: 2567. Total energy = 3443.9324 kcal/mol (3436.9691 without restraints) Performing minimization step: 2568. Total energy = 3443.8145 kcal/mol (3436.8483 without restraints) Performing minimization step: 2569. Total energy = 3443.6987 kcal/mol (3436.7384 without restraints) Performing minimization step: 2570. Total energy = 3443.5806 kcal/mol (3436.6177 without restraints) Performing minimization step: 2571. Total energy = 3443.4650 kcal/mol (3436.5077 without restraints) Performing minimization step: 2572. Total energy = 3443.3474 kcal/mol (3436.3874 without restraints) Performing minimization step: 2573. Total energy = 3443.2319 kcal/mol (3436.2778 without restraints) Performing minimization step: 2574. Total energy = 3443.1145 kcal/mol (3436.1575 without restraints) Performing minimization step: 2575. Total energy = 3442.9999 kcal/mol (3436.0487 without restraints) Performing minimization step: 2576. Total energy = 3442.8825 kcal/mol (3435.9285 without restraints) Performing minimization step: 2577. Total energy = 3442.7676 kcal/mol (3435.8194 without restraints) Performing minimization step: 2578. Total energy = 3442.6504 kcal/mol (3435.6995 without restraints) Performing minimization step: 2579. Total energy = 3442.5356 kcal/mol (3435.5904 without restraints) Performing minimization step: 2580. Total energy = 3442.4182 kcal/mol (3435.4699 without restraints) Performing minimization step: 2581. Total energy = 3442.3030 kcal/mol (3435.3608 without restraints) Performing minimization step: 2582. Total energy = 3442.1848 kcal/mol (3435.2399 without restraints) Performing minimization step: 2583. Total energy = 3442.0703 kcal/mol (3435.1311 without restraints) Performing minimization step: 2584. Total energy = 3441.9532 kcal/mol (3435.0114 without restraints) Performing minimization step: 2585. Total energy = 3441.8389 kcal/mol (3434.9027 without restraints) Performing minimization step: 2586. Total energy = 3441.7221 kcal/mol (3434.7832 without restraints) Performing minimization step: 2587. Total energy = 3441.6082 kcal/mol (3434.6750 without restraints) Performing minimization step: 2588. Total energy = 3441.4912 kcal/mol (3434.5553 without restraints) Performing minimization step: 2589. Total energy = 3441.3771 kcal/mol (3434.4469 without restraints) Performing minimization step: 2590. Total energy = 3441.2600 kcal/mol (3434.3271 without restraints) Performing minimization step: 2591. Total energy = 3441.1458 kcal/mol (3434.2186 without restraints) Performing minimization step: 2592. Total energy = 3441.0291 kcal/mol (3434.0990 without restraints) Performing minimization step: 2593. Total energy = 3440.9148 kcal/mol (3433.9906 without restraints) Performing minimization step: 2594. Total energy = 3440.7982 kcal/mol (3433.8712 without restraints) Performing minimization step: 2595. Total energy = 3440.6846 kcal/mol (3433.7633 without restraints) Performing minimization step: 2596. Total energy = 3440.5685 kcal/mol (3433.6445 without restraints) Performing minimization step: 2597. Total energy = 3440.4546 kcal/mol (3433.5364 without restraints) Performing minimization step: 2598. Total energy = 3440.3385 kcal/mol (3433.4174 without restraints) Performing minimization step: 2599. Total energy = 3440.2244 kcal/mol (3433.3091 without restraints) Performing minimization step: 2600. Total energy = 3440.1085 kcal/mol (3433.1904 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e0aaf9ce/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 2601. Total energy = 3439.9949 kcal/mol (3433.0825 without restraints) Performing minimization step: 2602. Total energy = 3439.8789 kcal/mol (3432.9638 without restraints) Performing minimization step: 2603. Total energy = 3439.7655 kcal/mol (3432.8562 without restraints) Performing minimization step: 2604. Total energy = 3439.6500 kcal/mol (3432.7379 without restraints) Performing minimization step: 2605. Total energy = 3439.5367 kcal/mol (3432.6304 without restraints) Performing minimization step: 2606. Total energy = 3439.4208 kcal/mol (3432.5117 without restraints) Performing minimization step: 2607. Total energy = 3439.3074 kcal/mol (3432.4040 without restraints) Performing minimization step: 2608. Total energy = 3439.1914 kcal/mol (3432.2852 without restraints) Performing minimization step: 2609. Total energy = 3439.0782 kcal/mol (3432.1777 without restraints) Performing minimization step: 2610. Total energy = 3438.9627 kcal/mol (3432.0593 without restraints) Performing minimization step: 2611. Total energy = 3438.8493 kcal/mol (3431.9517 without restraints) Performing minimization step: 2612. Total energy = 3438.7340 kcal/mol (3431.8336 without restraints) Performing minimization step: 2613. Total energy = 3438.6210 kcal/mol (3431.7264 without restraints) Performing minimization step: 2614. Total energy = 3438.5060 kcal/mol (3431.6086 without restraints) Performing minimization step: 2615. Total energy = 3438.3926 kcal/mol (3431.5009 without restraints) Performing minimization step: 2616. Total energy = 3438.2778 kcal/mol (3431.3833 without restraints) Performing minimization step: 2617. Total energy = 3438.1648 kcal/mol (3431.2761 without restraints) Performing minimization step: 2618. Total energy = 3438.0496 kcal/mol (3431.1581 without restraints) Performing minimization step: 2619. Total energy = 3437.9373 kcal/mol (3431.0515 without restraints) Performing minimization step: 2620. Total energy = 3437.8226 kcal/mol (3430.9340 without restraints) Performing minimization step: 2621. Total energy = 3437.7100 kcal/mol (3430.8272 without restraints) Performing minimization step: 2622. Total energy = 3437.5953 kcal/mol (3430.7097 without restraints) Performing minimization step: 2623. Total energy = 3437.4828 kcal/mol (3430.6029 without restraints) Performing minimization step: 2624. Total energy = 3437.3681 kcal/mol (3430.4853 without restraints) Performing minimization step: 2625. Total energy = 3437.2556 kcal/mol (3430.3786 without restraints) Performing minimization step: 2626. Total energy = 3437.1410 kcal/mol (3430.2612 without restraints) Performing minimization step: 2627. Total energy = 3437.0285 kcal/mol (3430.1546 without restraints) Performing minimization step: 2628. Total energy = 3436.9142 kcal/mol (3430.0373 without restraints) Performing minimization step: 2629. Total energy = 3436.8020 kcal/mol (3429.9309 without restraints) Performing minimization step: 2630. Total energy = 3436.6877 kcal/mol (3429.8137 without restraints) Performing minimization step: 2631. Total energy = 3436.5752 kcal/mol (3429.7070 without restraints) Performing minimization step: 2632. Total energy = 3436.4609 kcal/mol (3429.5898 without restraints) Performing minimization step: 2633. Total energy = 3436.3490 kcal/mol (3429.4839 without restraints) Performing minimization step: 2634. Total energy = 3436.2354 kcal/mol (3429.3675 without restraints) Performing minimization step: 2635. Total energy = 3436.1235 kcal/mol (3429.2612 without restraints) Performing minimization step: 2636. Total energy = 3436.0095 kcal/mol (3429.1444 without restraints) Performing minimization step: 2637. Total energy = 3435.8977 kcal/mol (3429.0382 without restraints) Performing minimization step: 2638. Total energy = 3435.7837 kcal/mol (3428.9215 without restraints) Performing minimization step: 2639. Total energy = 3435.6722 kcal/mol (3428.8157 without restraints) Performing minimization step: 2640. Total energy = 3435.5584 kcal/mol (3428.6991 without restraints) Performing minimization step: 2641. Total energy = 3435.4472 kcal/mol (3428.5935 without restraints) Performing minimization step: 2642. Total energy = 3435.3335 kcal/mol (3428.4770 without restraints) Performing minimization step: 2643. Total energy = 3435.2225 kcal/mol (3428.3717 without restraints) Performing minimization step: 2644. Total energy = 3435.1086 kcal/mol (3428.2551 without restraints) Performing minimization step: 2645. Total energy = 3434.9975 kcal/mol (3428.1496 without restraints) Performing minimization step: 2646. Total energy = 3434.8840 kcal/mol (3428.0333 without restraints) Performing minimization step: 2647. Total energy = 3434.7736 kcal/mol (3427.9286 without restraints) Performing minimization step: 2648. Total energy = 3434.6595 kcal/mol (3427.8116 without restraints) Performing minimization step: 2649. Total energy = 3434.5487 kcal/mol (3427.7066 without restraints) Performing minimization step: 2650. Total energy = 3434.4353 kcal/mol (3427.5903 without restraints) Performing minimization step: 2651. Total energy = 3434.3242 kcal/mol (3427.4850 without restraints) Performing minimization step: 2652. Total energy = 3434.2107 kcal/mol (3427.3686 without restraints) Performing minimization step: 2653. Total energy = 3434.0998 kcal/mol (3427.2634 without restraints) Performing minimization step: 2654. Total energy = 3433.9871 kcal/mol (3427.1478 without restraints) Performing minimization step: 2655. Total energy = 3433.8765 kcal/mol (3427.0430 without restraints) Performing minimization step: 2656. Total energy = 3433.7635 kcal/mol (3426.9271 without restraints) Performing minimization step: 2657. Total energy = 3433.6528 kcal/mol (3426.8222 without restraints) Performing minimization step: 2658. Total energy = 3433.5400 kcal/mol (3426.7064 without restraints) Performing minimization step: 2659. Total energy = 3433.4294 kcal/mol (3426.6016 without restraints) Performing minimization step: 2660. Total energy = 3433.3165 kcal/mol (3426.4858 without restraints) Performing minimization step: 2661. Total energy = 3433.2062 kcal/mol (3426.3811 without restraints) Performing minimization step: 2662. Total energy = 3433.0929 kcal/mol (3426.2651 without restraints) Performing minimization step: 2663. Total energy = 3432.9830 kcal/mol (3426.1610 without restraints) Performing minimization step: 2664. Total energy = 3432.8704 kcal/mol (3426.0454 without restraints) Performing minimization step: 2665. Total energy = 3432.7603 kcal/mol (3425.9411 without restraints) Performing minimization step: 2666. Total energy = 3432.6479 kcal/mol (3425.8257 without restraints) Performing minimization step: 2667. Total energy = 3432.5381 kcal/mol (3425.7218 without restraints) Performing minimization step: 2668. Total energy = 3432.4255 kcal/mol (3425.6062 without restraints) Performing minimization step: 2669. Total energy = 3432.3156 kcal/mol (3425.5021 without restraints) Performing minimization step: 2670. Total energy = 3432.2031 kcal/mol (3425.3867 without restraints) Performing minimization step: 2671. Total energy = 3432.0929 kcal/mol (3425.2822 without restraints) Performing minimization step: 2672. Total energy = 3431.9806 kcal/mol (3425.1670 without restraints) Performing minimization step: 2673. Total energy = 3431.8709 kcal/mol (3425.0631 without restraints) Performing minimization step: 2674. Total energy = 3431.7590 kcal/mol (3424.9483 without restraints) Performing minimization step: 2675. Total energy = 3431.6494 kcal/mol (3424.8444 without restraints) Performing minimization step: 2676. Total energy = 3431.5373 kcal/mol (3424.7294 without restraints) Performing minimization step: 2677. Total energy = 3431.4283 kcal/mol (3424.6261 without restraints) Performing minimization step: 2678. Total energy = 3431.3166 kcal/mol (3424.5114 without restraints) Performing minimization step: 2679. Total energy = 3431.2070 kcal/mol (3424.4077 without restraints) Performing minimization step: 2680. Total energy = 3431.0951 kcal/mol (3424.2927 without restraints) Performing minimization step: 2681. Total energy = 3430.9853 kcal/mol (3424.1888 without restraints) Performing minimization step: 2682. Total energy = 3430.8731 kcal/mol (3424.0737 without restraints) Performing minimization step: 2683. Total energy = 3430.7643 kcal/mol (3423.9706 without restraints) Performing minimization step: 2684. Total energy = 3430.6527 kcal/mol (3423.8561 without restraints) Performing minimization step: 2685. Total energy = 3430.5437 kcal/mol (3423.7528 without restraints) Performing minimization step: 2686. Total energy = 3430.4319 kcal/mol (3423.6381 without restraints) Performing minimization step: 2687. Total energy = 3430.3226 kcal/mol (3423.5343 without restraints) Performing minimization step: 2688. Total energy = 3430.2109 kcal/mol (3423.4199 without restraints) Performing minimization step: 2689. Total energy = 3430.1019 kcal/mol (3423.3166 without restraints) Performing minimization step: 2690. Total energy = 3429.9906 kcal/mol (3423.2023 without restraints) Performing minimization step: 2691. Total energy = 3429.8817 kcal/mol (3423.0993 without restraints) Performing minimization step: 2692. Total energy = 3429.7703 kcal/mol (3422.9849 without restraints) Performing minimization step: 2693. Total energy = 3429.6615 kcal/mol (3422.8819 without restraints) Performing minimization step: 2694. Total energy = 3429.5497 kcal/mol (3422.7671 without restraints) Performing minimization step: 2695. Total energy = 3429.4414 kcal/mol (3422.6647 without restraints) Performing minimization step: 2696. Total energy = 3429.3305 kcal/mol (3422.5507 without restraints) Performing minimization step: 2697. Total energy = 3429.2219 kcal/mol (3422.4479 without restraints) Performing minimization step: 2698. Total energy = 3429.1112 kcal/mol (3422.3342 without restraints) Performing minimization step: 2699. Total energy = 3429.0030 kcal/mol (3422.2317 without restraints) Performing minimization step: 2700. Total energy = 3428.8922 kcal/mol (3422.1179 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e0aaf9ce/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 2701. Total energy = 3428.7839 kcal/mol (3422.0153 without restraints) Performing minimization step: 2702. Total energy = 3428.6731 kcal/mol (3421.9017 without restraints) Performing minimization step: 2703. Total energy = 3428.5651 kcal/mol (3421.7994 without restraints) Performing minimization step: 2704. Total energy = 3428.4544 kcal/mol (3421.6858 without restraints) Performing minimization step: 2705. Total energy = 3428.3468 kcal/mol (3421.5840 without restraints) Performing minimization step: 2706. Total energy = 3428.2360 kcal/mol (3421.4701 without restraints) Performing minimization step: 2707. Total energy = 3428.1282 kcal/mol (3421.3681 without restraints) Performing minimization step: 2708. Total energy = 3428.0177 kcal/mol (3421.2546 without restraints) Performing minimization step: 2709. Total energy = 3427.9099 kcal/mol (3421.1526 without restraints) Performing minimization step: 2710. Total energy = 3427.7989 kcal/mol (3421.0386 without restraints) Performing minimization step: 2711. Total energy = 3427.6913 kcal/mol (3420.9368 without restraints) Performing minimization step: 2712. Total energy = 3427.5809 kcal/mol (3420.8232 without restraints) Performing minimization step: 2713. Total energy = 3427.4727 kcal/mol (3420.7210 without restraints) Performing minimization step: 2714. Total energy = 3427.3620 kcal/mol (3420.6071 without restraints) Performing minimization step: 2715. Total energy = 3427.2546 kcal/mol (3420.5054 without restraints) Performing minimization step: 2716. Total energy = 3427.1442 kcal/mol (3420.3922 without restraints) Performing minimization step: 2717. Total energy = 3427.0367 kcal/mol (3420.2905 without restraints) Performing minimization step: 2718. Total energy = 3426.9268 kcal/mol (3420.1775 without restraints) Performing minimization step: 2719. Total energy = 3426.8189 kcal/mol (3420.0755 without restraints) Performing minimization step: 2720. Total energy = 3426.7089 kcal/mol (3419.9624 without restraints) Performing minimization step: 2721. Total energy = 3426.6018 kcal/mol (3419.8611 without restraints) Performing minimization step: 2722. Total energy = 3426.4922 kcal/mol (3419.7484 without restraints) Performing minimization step: 2723. Total energy = 3426.3849 kcal/mol (3419.6470 without restraints) Performing minimization step: 2724. Total energy = 3426.2754 kcal/mol (3419.5344 without restraints) Performing minimization step: 2725. Total energy = 3426.1684 kcal/mol (3419.4332 without restraints) Performing minimization step: 2726. Total energy = 3426.0589 kcal/mol (3419.3206 without restraints) Performing minimization step: 2727. Total energy = 3425.9521 kcal/mol (3419.2197 without restraints) Performing minimization step: 2728. Total energy = 3425.8426 kcal/mol (3419.1069 without restraints) Performing minimization step: 2729. Total energy = 3425.7357 kcal/mol (3419.0059 without restraints) Performing minimization step: 2730. Total energy = 3425.6263 kcal/mol (3418.8934 without restraints) Performing minimization step: 2731. Total energy = 3425.5197 kcal/mol (3418.7926 without restraints) Performing minimization step: 2732. Total energy = 3425.4105 kcal/mol (3418.6806 without restraints) Performing minimization step: 2733. Total energy = 3425.3043 kcal/mol (3418.5802 without restraints) Performing minimization step: 2734. Total energy = 3425.1956 kcal/mol (3418.4683 without restraints) Performing minimization step: 2735. Total energy = 3425.0892 kcal/mol (3418.3677 without restraints) Performing minimization step: 2736. Total energy = 3424.9802 kcal/mol (3418.2557 without restraints) Performing minimization step: 2737. Total energy = 3424.8736 kcal/mol (3418.1547 without restraints) Performing minimization step: 2738. Total energy = 3424.7643 kcal/mol (3418.0425 without restraints) Performing minimization step: 2739. Total energy = 3424.6583 kcal/mol (3417.9422 without restraints) Performing minimization step: 2740. Total energy = 3424.5488 kcal/mol (3417.8296 without restraints) Performing minimization step: 2741. Total energy = 3424.4426 kcal/mol (3417.7293 without restraints) Performing minimization step: 2742. Total energy = 3424.3341 kcal/mol (3417.6177 without restraints) Performing minimization step: 2743. Total energy = 3424.2280 kcal/mol (3417.5174 without restraints) Performing minimization step: 2744. Total energy = 3424.1191 kcal/mol (3417.4053 without restraints) Performing minimization step: 2745. Total energy = 3424.0137 kcal/mol (3417.3058 without restraints) Performing minimization step: 2746. Total energy = 3423.9053 kcal/mol (3417.1943 without restraints) Performing minimization step: 2747. Total energy = 3423.7992 kcal/mol (3417.0940 without restraints) Performing minimization step: 2748. Total energy = 3423.6908 kcal/mol (3416.9825 without restraints) Performing minimization step: 2749. Total energy = 3423.5851 kcal/mol (3416.8826 without restraints) Performing minimization step: 2750. Total energy = 3423.4766 kcal/mol (3416.7711 without restraints) Performing minimization step: 2751. Total energy = 3423.3712 kcal/mol (3416.6714 without restraints) Performing minimization step: 2752. Total energy = 3423.2630 kcal/mol (3416.5601 without restraints) Performing minimization step: 2753. Total energy = 3423.1575 kcal/mol (3416.4604 without restraints) Performing minimization step: 2754. Total energy = 3423.0498 kcal/mol (3416.3495 without restraints) Performing minimization step: 2755. Total energy = 3422.9443 kcal/mol (3416.2500 without restraints) Performing minimization step: 2756. Total energy = 3422.8367 kcal/mol (3416.1389 without restraints) Performing minimization step: 2757. Total energy = 3422.7311 kcal/mol (3416.0394 without restraints) Performing minimization step: 2758. Total energy = 3422.6231 kcal/mol (3415.9284 without restraints) Performing minimization step: 2759. Total energy = 3422.5179 kcal/mol (3415.8288 without restraints) Performing minimization step: 2760. Total energy = 3422.4100 kcal/mol (3415.7179 without restraints) Performing minimization step: 2761. Total energy = 3422.3051 kcal/mol (3415.6188 without restraints) Performing minimization step: 2762. Total energy = 3422.1970 kcal/mol (3415.5076 without restraints) Performing minimization step: 2763. Total energy = 3422.0920 kcal/mol (3415.4085 without restraints) Performing minimization step: 2764. Total energy = 3421.9845 kcal/mol (3415.2978 without restraints) Performing minimization step: 2765. Total energy = 3421.8794 kcal/mol (3415.1984 without restraints) Performing minimization step: 2766. Total energy = 3421.7722 kcal/mol (3415.0882 without restraints) Performing minimization step: 2767. Total energy = 3421.6672 kcal/mol (3414.9890 without restraints) Performing minimization step: 2768. Total energy = 3421.5594 kcal/mol (3414.8779 without restraints) Performing minimization step: 2769. Total energy = 3421.4545 kcal/mol (3414.7789 without restraints) Performing minimization step: 2770. Total energy = 3421.3470 kcal/mol (3414.6684 without restraints) Performing minimization step: 2771. Total energy = 3421.2426 kcal/mol (3414.5697 without restraints) Performing minimization step: 2772. Total energy = 3421.1355 kcal/mol (3414.4595 without restraints) Performing minimization step: 2773. Total energy = 3421.0310 kcal/mol (3414.3608 without restraints) Performing minimization step: 2774. Total energy = 3420.9242 kcal/mol (3414.2508 without restraints) Performing minimization step: 2775. Total energy = 3420.8195 kcal/mol (3414.1520 without restraints) Performing minimization step: 2776. Total energy = 3420.7130 kcal/mol (3414.0424 without restraints) Performing minimization step: 2777. Total energy = 3420.6085 kcal/mol (3413.9437 without restraints) Performing minimization step: 2778. Total energy = 3420.5017 kcal/mol (3413.8337 without restraints) Performing minimization step: 2779. Total energy = 3420.3975 kcal/mol (3413.7352 without restraints) Performing minimization step: 2780. Total energy = 3420.2904 kcal/mol (3413.6251 without restraints) Performing minimization step: 2781. Total energy = 3420.1866 kcal/mol (3413.5270 without restraints) Performing minimization step: 2782. Total energy = 3420.0803 kcal/mol (3413.4177 without restraints) Performing minimization step: 2783. Total energy = 3419.9762 kcal/mol (3413.3193 without restraints) Performing minimization step: 2784. Total energy = 3419.8694 kcal/mol (3413.2092 without restraints) Performing minimization step: 2785. Total energy = 3419.7655 kcal/mol (3413.1113 without restraints) Performing minimization step: 2786. Total energy = 3419.6591 kcal/mol (3413.0017 without restraints) Performing minimization step: 2787. Total energy = 3419.5554 kcal/mol (3412.9038 without restraints) Performing minimization step: 2788. Total energy = 3419.4488 kcal/mol (3412.7942 without restraints) Performing minimization step: 2789. Total energy = 3419.3451 kcal/mol (3412.6960 without restraints) Performing minimization step: 2790. Total energy = 3419.2387 kcal/mol (3412.5866 without restraints) Performing minimization step: 2791. Total energy = 3419.1352 kcal/mol (3412.4889 without restraints) Performing minimization step: 2792. Total energy = 3419.0290 kcal/mol (3412.3796 without restraints) Performing minimization step: 2793. Total energy = 3418.9256 kcal/mol (3412.2820 without restraints) Performing minimization step: 2794. Total energy = 3418.8196 kcal/mol (3412.1728 without restraints) Performing minimization step: 2795. Total energy = 3418.7161 kcal/mol (3412.0751 without restraints) Performing minimization step: 2796. Total energy = 3418.6104 kcal/mol (3411.9662 without restraints) Performing minimization step: 2797. Total energy = 3418.5072 kcal/mol (3411.8689 without restraints) Performing minimization step: 2798. Total energy = 3418.4015 kcal/mol (3411.7599 without restraints) Performing minimization step: 2799. Total energy = 3418.2988 kcal/mol (3411.6630 without restraints) Performing minimization step: 2800. Total energy = 3418.1931 kcal/mol (3411.5542 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e0aaf9ce/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 2801. Total energy = 3418.0901 kcal/mol (3411.4570 without restraints) Performing minimization step: 2802. Total energy = 3417.9846 kcal/mol (3411.3485 without restraints) Performing minimization step: 2803. Total energy = 3417.8817 kcal/mol (3411.2512 without restraints) Performing minimization step: 2804. Total energy = 3417.7761 kcal/mol (3411.1426 without restraints) Performing minimization step: 2805. Total energy = 3417.6731 kcal/mol (3411.0453 without restraints) Performing minimization step: 2806. Total energy = 3417.5678 kcal/mol (3410.9369 without restraints) Performing minimization step: 2807. Total energy = 3417.4651 kcal/mol (3410.8399 without restraints) Performing minimization step: 2808. Total energy = 3417.3600 kcal/mol (3410.7317 without restraints) Performing minimization step: 2809. Total energy = 3417.2571 kcal/mol (3410.6345 without restraints) Performing minimization step: 2810. Total energy = 3417.1521 kcal/mol (3410.5264 without restraints) Performing minimization step: 2811. Total energy = 3417.0497 kcal/mol (3410.4297 without restraints) Performing minimization step: 2812. Total energy = 3416.9455 kcal/mol (3410.3223 without restraints) Performing minimization step: 2813. Total energy = 3416.8430 kcal/mol (3410.2256 without restraints) Performing minimization step: 2814. Total energy = 3416.7380 kcal/mol (3410.1174 without restraints) Performing minimization step: 2815. Total energy = 3416.6349 kcal/mol (3410.0201 without restraints) Performing minimization step: 2816. Total energy = 3416.5303 kcal/mol (3409.9123 without restraints) Performing minimization step: 2817. Total energy = 3416.4280 kcal/mol (3409.8160 without restraints) Performing minimization step: 2818. Total energy = 3416.3236 kcal/mol (3409.7083 without restraints) Performing minimization step: 2819. Total energy = 3416.2214 kcal/mol (3409.6119 without restraints) Performing minimization step: 2820. Total energy = 3416.1168 kcal/mol (3409.5041 without restraints) Performing minimization step: 2821. Total energy = 3416.0148 kcal/mol (3409.4077 without restraints) Performing minimization step: 2822. Total energy = 3415.9099 kcal/mol (3409.2996 without restraints) Performing minimization step: 2823. Total energy = 3415.8076 kcal/mol (3409.2032 without restraints) Performing minimization step: 2824. Total energy = 3415.7034 kcal/mol (3409.0958 without restraints) Performing minimization step: 2825. Total energy = 3415.6015 kcal/mol (3408.9997 without restraints) Performing minimization step: 2826. Total energy = 3415.4974 kcal/mol (3408.8925 without restraints) Performing minimization step: 2827. Total energy = 3415.3953 kcal/mol (3408.7961 without restraints) Performing minimization step: 2828. Total energy = 3415.2909 kcal/mol (3408.6885 without restraints) Performing minimization step: 2829. Total energy = 3415.1894 kcal/mol (3408.5927 without restraints) Performing minimization step: 2830. Total energy = 3415.0853 kcal/mol (3408.4854 without restraints) Performing minimization step: 2831. Total energy = 3414.9838 kcal/mol (3408.3897 without restraints) Performing minimization step: 2832. Total energy = 3414.8801 kcal/mol (3408.2829 without restraints) Performing minimization step: 2833. Total energy = 3414.7784 kcal/mol (3408.1868 without restraints) Performing minimization step: 2834. Total energy = 3414.6746 kcal/mol (3408.0800 without restraints) Performing minimization step: 2835. Total energy = 3414.5734 kcal/mol (3407.9844 without restraints) Performing minimization step: 2836. Total energy = 3414.4697 kcal/mol (3407.8776 without restraints) Performing minimization step: 2837. Total energy = 3414.3687 kcal/mol (3407.7824 without restraints) Performing minimization step: 2838. Total energy = 3414.2651 kcal/mol (3407.6757 without restraints) Performing minimization step: 2839. Total energy = 3414.1642 kcal/mol (3407.5805 without restraints) Performing minimization step: 2840. Total energy = 3414.0611 kcal/mol (3407.4742 without restraints) Performing minimization step: 2841. Total energy = 3413.9605 kcal/mol (3407.3793 without restraints) Performing minimization step: 2842. Total energy = 3413.8571 kcal/mol (3407.2727 without restraints) Performing minimization step: 2843. Total energy = 3413.7564 kcal/mol (3407.1778 without restraints) Performing minimization step: 2844. Total energy = 3413.6531 kcal/mol (3407.0713 without restraints) Performing minimization step: 2845. Total energy = 3413.5523 kcal/mol (3406.9763 without restraints) Performing minimization step: 2846. Total energy = 3413.4487 kcal/mol (3406.8694 without restraints) Performing minimization step: 2847. Total energy = 3413.3481 kcal/mol (3406.7747 without restraints) Performing minimization step: 2848. Total energy = 3413.2450 kcal/mol (3406.6683 without restraints) Performing minimization step: 2849. Total energy = 3413.1446 kcal/mol (3406.5736 without restraints) Performing minimization step: 2850. Total energy = 3413.0415 kcal/mol (3406.4674 without restraints) Performing minimization step: 2851. Total energy = 3412.9411 kcal/mol (3406.3727 without restraints) Performing minimization step: 2852. Total energy = 3412.8383 kcal/mol (3406.2667 without restraints) Performing minimization step: 2853. Total energy = 3412.7382 kcal/mol (3406.1724 without restraints) Performing minimization step: 2854. Total energy = 3412.6354 kcal/mol (3406.0663 without restraints) Performing minimization step: 2855. Total energy = 3412.5354 kcal/mol (3405.9722 without restraints) Performing minimization step: 2856. Total energy = 3412.4327 kcal/mol (3405.8662 without restraints) Performing minimization step: 2857. Total energy = 3412.3328 kcal/mol (3405.7722 without restraints) Performing minimization step: 2858. Total energy = 3412.2303 kcal/mol (3405.6664 without restraints) Performing minimization step: 2859. Total energy = 3412.1308 kcal/mol (3405.5726 without restraints) Performing minimization step: 2860. Total energy = 3412.0283 kcal/mol (3405.4669 without restraints) Performing minimization step: 2861. Total energy = 3411.9287 kcal/mol (3405.3731 without restraints) Performing minimization step: 2862. Total energy = 3411.8264 kcal/mol (3405.2675 without restraints) Performing minimization step: 2863. Total energy = 3411.7267 kcal/mol (3405.1736 without restraints) Performing minimization step: 2864. Total energy = 3411.6244 kcal/mol (3405.0680 without restraints) Performing minimization step: 2865. Total energy = 3411.5247 kcal/mol (3404.9743 without restraints) Performing minimization step: 2866. Total energy = 3411.4227 kcal/mol (3404.8690 without restraints) Performing minimization step: 2867. Total energy = 3411.3239 kcal/mol (3404.7759 without restraints) Performing minimization step: 2868. Total energy = 3411.2214 kcal/mol (3404.6702 without restraints) Performing minimization step: 2869. Total energy = 3411.1222 kcal/mol (3404.5768 without restraints) Performing minimization step: 2870. Total energy = 3411.0202 kcal/mol (3404.4715 without restraints) Performing minimization step: 2871. Total energy = 3410.9214 kcal/mol (3404.3784 without restraints) Performing minimization step: 2872. Total energy = 3410.8192 kcal/mol (3404.2730 without restraints) Performing minimization step: 2873. Total energy = 3410.7200 kcal/mol (3404.1796 without restraints) Performing minimization step: 2874. Total energy = 3410.6189 kcal/mol (3404.0752 without restraints) Performing minimization step: 2875. Total energy = 3410.5203 kcal/mol (3403.9824 without restraints) Performing minimization step: 2876. Total energy = 3410.4188 kcal/mol (3403.8776 without restraints) Performing minimization step: 2877. Total energy = 3410.3200 kcal/mol (3403.7847 without restraints) Performing minimization step: 2878. Total energy = 3410.2185 kcal/mol (3403.6798 without restraints) Performing minimization step: 2879. Total energy = 3410.1193 kcal/mol (3403.5864 without restraints) Performing minimization step: 2880. Total energy = 3410.0180 kcal/mol (3403.4818 without restraints) Performing minimization step: 2881. Total energy = 3409.9189 kcal/mol (3403.3885 without restraints) Performing minimization step: 2882. Total energy = 3409.8181 kcal/mol (3403.2846 without restraints) Performing minimization step: 2883. Total energy = 3409.7199 kcal/mol (3403.1921 without restraints) Performing minimization step: 2884. Total energy = 3409.6187 kcal/mol (3403.0875 without restraints) Performing minimization step: 2885. Total energy = 3409.5202 kcal/mol (3402.9949 without restraints) Performing minimization step: 2886. Total energy = 3409.4192 kcal/mol (3402.8906 without restraints) Performing minimization step: 2887. Total energy = 3409.3211 kcal/mol (3402.7983 without restraints) Performing minimization step: 2888. Total energy = 3409.2201 kcal/mol (3402.6939 without restraints) Performing minimization step: 2889. Total energy = 3409.1219 kcal/mol (3402.6017 without restraints) Performing minimization step: 2890. Total energy = 3409.0213 kcal/mol (3402.4977 without restraints) Performing minimization step: 2891. Total energy = 3408.9235 kcal/mol (3402.4056 without restraints) Performing minimization step: 2892. Total energy = 3408.8221 kcal/mol (3402.3010 without restraints) Performing minimization step: 2893. Total energy = 3408.7243 kcal/mol (3402.2090 without restraints) Performing minimization step: 2894. Total energy = 3408.6237 kcal/mol (3402.1050 without restraints) Performing minimization step: 2895. Total energy = 3408.5262 kcal/mol (3402.0133 without restraints) Performing minimization step: 2896. Total energy = 3408.4256 kcal/mol (3401.9095 without restraints) Performing minimization step: 2897. Total energy = 3408.3276 kcal/mol (3401.8171 without restraints) Performing minimization step: 2898. Total energy = 3408.2274 kcal/mol (3401.7137 without restraints) Performing minimization step: 2899. Total energy = 3408.1297 kcal/mol (3401.6218 without restraints) Performing minimization step: 2900. Total energy = 3408.0296 kcal/mol (3401.5184 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e0aaf9ce/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 2901. Total energy = 3407.9322 kcal/mol (3401.4268 without restraints) Performing minimization step: 2902. Total energy = 3407.8323 kcal/mol (3401.3236 without restraints) Performing minimization step: 2903. Total energy = 3407.7353 kcal/mol (3401.2323 without restraints) Performing minimization step: 2904. Total energy = 3407.6353 kcal/mol (3401.1291 without restraints) Performing minimization step: 2905. Total energy = 3407.5382 kcal/mol (3401.0378 without restraints) Performing minimization step: 2906. Total energy = 3407.4382 kcal/mol (3400.9345 without restraints) Performing minimization step: 2907. Total energy = 3407.3414 kcal/mol (3400.8434 without restraints) Performing minimization step: 2908. Total energy = 3407.2417 kcal/mol (3400.7404 without restraints) Performing minimization step: 2909. Total energy = 3407.1453 kcal/mol (3400.6498 without restraints) Performing minimization step: 2910. Total energy = 3407.0454 kcal/mol (3400.5466 without restraints) Performing minimization step: 2911. Total energy = 3406.9488 kcal/mol (3400.4558 without restraints) Performing minimization step: 2912. Total energy = 3406.8493 kcal/mol (3400.3530 without restraints) Performing minimization step: 2913. Total energy = 3406.7524 kcal/mol (3400.2619 without restraints) Performing minimization step: 2914. Total energy = 3406.6530 kcal/mol (3400.1592 without restraints) Performing minimization step: 2915. Total energy = 3406.5570 kcal/mol (3400.0689 without restraints) Performing minimization step: 2916. Total energy = 3406.4577 kcal/mol (3399.9663 without restraints) Performing minimization step: 2917. Total energy = 3406.3611 kcal/mol (3399.8755 without restraints) Performing minimization step: 2918. Total energy = 3406.2620 kcal/mol (3399.7730 without restraints) Performing minimization step: 2919. Total energy = 3406.1658 kcal/mol (3399.6827 without restraints) Performing minimization step: 2920. Total energy = 3406.0669 kcal/mol (3399.5804 without restraints) Performing minimization step: 2921. Total energy = 3405.9708 kcal/mol (3399.4902 without restraints) Performing minimization step: 2922. Total energy = 3405.8718 kcal/mol (3399.3877 without restraints) Performing minimization step: 2923. Total energy = 3405.7758 kcal/mol (3399.2975 without restraints) Performing minimization step: 2924. Total energy = 3405.6773 kcal/mol (3399.1957 without restraints) Performing minimization step: 2925. Total energy = 3405.5814 kcal/mol (3399.1055 without restraints) Performing minimization step: 2926. Total energy = 3405.4826 kcal/mol (3399.0034 without restraints) Performing minimization step: 2927. Total energy = 3405.3868 kcal/mol (3398.9135 without restraints) Performing minimization step: 2928. Total energy = 3405.2877 kcal/mol (3398.8110 without restraints) Performing minimization step: 2929. Total energy = 3405.1923 kcal/mol (3398.7214 without restraints) Performing minimization step: 2930. Total energy = 3405.0938 kcal/mol (3398.6195 without restraints) Performing minimization step: 2931. Total energy = 3404.9983 kcal/mol (3398.5299 without restraints) Performing minimization step: 2932. Total energy = 3404.9001 kcal/mol (3398.4283 without restraints) Performing minimization step: 2933. Total energy = 3404.8048 kcal/mol (3398.3388 without restraints) Performing minimization step: 2934. Total energy = 3404.7071 kcal/mol (3398.2377 without restraints) Performing minimization step: 2935. Total energy = 3404.6119 kcal/mol (3398.1483 without restraints) Performing minimization step: 2936. Total energy = 3404.5140 kcal/mol (3398.0470 without restraints) Performing minimization step: 2937. Total energy = 3404.4191 kcal/mol (3397.9579 without restraints) Performing minimization step: 2938. Total energy = 3404.3211 kcal/mol (3397.8566 without restraints) Performing minimization step: 2939. Total energy = 3404.2262 kcal/mol (3397.7675 without restraints) Performing minimization step: 2940. Total energy = 3404.1280 kcal/mol (3397.6657 without restraints) Performing minimization step: 2941. Total energy = 3404.0331 kcal/mol (3397.5769 without restraints) Performing minimization step: 2942. Total energy = 3403.9355 kcal/mol (3397.4759 without restraints) Performing minimization step: 2943. Total energy = 3403.8406 kcal/mol (3397.3868 without restraints) Performing minimization step: 2944. Total energy = 3403.7429 kcal/mol (3397.2857 without restraints) Performing minimization step: 2945. Total energy = 3403.6486 kcal/mol (3397.1972 without restraints) Performing minimization step: 2946. Total energy = 3403.5513 kcal/mol (3397.0964 without restraints) Performing minimization step: 2947. Total energy = 3403.4569 kcal/mol (3397.0078 without restraints) Performing minimization step: 2948. Total energy = 3403.3596 kcal/mol (3396.9072 without restraints) Performing minimization step: 2949. Total energy = 3403.2654 kcal/mol (3396.8188 without restraints) Performing minimization step: 2950. Total energy = 3403.1682 kcal/mol (3396.7183 without restraints) Performing minimization step: 2951. Total energy = 3403.0744 kcal/mol (3396.6303 without restraints) Performing minimization step: 2952. Total energy = 3402.9774 kcal/mol (3396.5299 without restraints) Performing minimization step: 2953. Total energy = 3402.8832 kcal/mol (3396.4414 without restraints) Performing minimization step: 2954. Total energy = 3402.7864 kcal/mol (3396.3412 without restraints) Performing minimization step: 2955. Total energy = 3402.6925 kcal/mol (3396.2532 without restraints) Performing minimization step: 2956. Total energy = 3402.5958 kcal/mol (3396.1531 without restraints) Performing minimization step: 2957. Total energy = 3402.5018 kcal/mol (3396.0649 without restraints) Performing minimization step: 2958. Total energy = 3402.4053 kcal/mol (3395.9650 without restraints) Performing minimization step: 2959. Total energy = 3402.3117 kcal/mol (3395.8772 without restraints) Performing minimization step: 2960. Total energy = 3402.2154 kcal/mol (3395.7775 without restraints) Performing minimization step: 2961. Total energy = 3402.1216 kcal/mol (3395.6895 without restraints) Performing minimization step: 2962. Total energy = 3402.0252 kcal/mol (3395.5897 without restraints) Performing minimization step: 2963. Total energy = 3401.9318 kcal/mol (3395.5021 without restraints) Performing minimization step: 2964. Total energy = 3401.8354 kcal/mol (3395.4023 without restraints) Performing minimization step: 2965. Total energy = 3401.7421 kcal/mol (3395.3148 without restraints) Performing minimization step: 2966. Total energy = 3401.6462 kcal/mol (3395.2155 without restraints) Performing minimization step: 2967. Total energy = 3401.5531 kcal/mol (3395.1281 without restraints) Performing minimization step: 2968. Total energy = 3401.4571 kcal/mol (3395.0288 without restraints) Performing minimization step: 2969. Total energy = 3401.3638 kcal/mol (3394.9413 without restraints) Performing minimization step: 2970. Total energy = 3401.2686 kcal/mol (3394.8426 without restraints) Performing minimization step: 2971. Total energy = 3401.1756 kcal/mol (3394.7555 without restraints) Performing minimization step: 2972. Total energy = 3401.0801 kcal/mol (3394.6566 without restraints) Performing minimization step: 2973. Total energy = 3400.9873 kcal/mol (3394.5696 without restraints) Performing minimization step: 2974. Total energy = 3400.8915 kcal/mol (3394.4703 without restraints) Performing minimization step: 2975. Total energy = 3400.7986 kcal/mol (3394.3832 without restraints) Performing minimization step: 2976. Total energy = 3400.7030 kcal/mol (3394.2842 without restraints) Performing minimization step: 2977. Total energy = 3400.6103 kcal/mol (3394.1973 without restraints) Performing minimization step: 2978. Total energy = 3400.5150 kcal/mol (3394.0985 without restraints) Performing minimization step: 2979. Total energy = 3400.4226 kcal/mol (3394.0120 without restraints) Performing minimization step: 2980. Total energy = 3400.3279 kcal/mol (3393.9139 without restraints) Performing minimization step: 2981. Total energy = 3400.2355 kcal/mol (3393.8273 without restraints) Performing minimization step: 2982. Total energy = 3400.1405 kcal/mol (3393.7289 without restraints) Performing minimization step: 2983. Total energy = 3400.0484 kcal/mol (3393.6426 without restraints) Performing minimization step: 2984. Total energy = 3399.9536 kcal/mol (3393.5442 without restraints) Performing minimization step: 2985. Total energy = 3399.8615 kcal/mol (3393.4582 without restraints) Performing minimization step: 2986. Total energy = 3399.7671 kcal/mol (3393.3601 without restraints) Performing minimization step: 2987. Total energy = 3399.6752 kcal/mol (3393.2741 without restraints) Performing minimization step: 2988. Total energy = 3399.5807 kcal/mol (3393.1761 without restraints) Performing minimization step: 2989. Total energy = 3399.4892 kcal/mol (3393.0904 without restraints) Performing minimization step: 2990. Total energy = 3399.3943 kcal/mol (3392.9921 without restraints) Performing minimization step: 2991. Total energy = 3399.3027 kcal/mol (3392.9063 without restraints) Performing minimization step: 2992. Total energy = 3399.2083 kcal/mol (3392.8084 without restraints) Performing minimization step: 2993. Total energy = 3399.1166 kcal/mol (3392.7225 without restraints) Performing minimization step: 2994. Total energy = 3399.0222 kcal/mol (3392.6247 without restraints) Performing minimization step: 2995. Total energy = 3398.9308 kcal/mol (3392.5392 without restraints) Performing minimization step: 2996. Total energy = 3398.8369 kcal/mol (3392.4418 without restraints) Performing minimization step: 2997. Total energy = 3398.7456 kcal/mol (3392.3563 without restraints) Performing minimization step: 2998. Total energy = 3398.6516 kcal/mol (3392.2588 without restraints) Performing minimization step: 2999. Total energy = 3398.5606 kcal/mol (3392.1737 without restraints) Performing minimization step: 3000. Total energy = 3398.4668 kcal/mol (3392.0763 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e0aaf9ce/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 3001. Total energy = 3398.3758 kcal/mol (3391.9912 without restraints) Performing minimization step: 3002. Total energy = 3398.2820 kcal/mol (3391.8939 without restraints) Performing minimization step: 3003. Total energy = 3398.1912 kcal/mol (3391.8091 without restraints) Performing minimization step: 3004. Total energy = 3398.0977 kcal/mol (3391.7119 without restraints) Performing minimization step: 3005. Total energy = 3398.0069 kcal/mol (3391.6270 without restraints) Performing minimization step: 3006. Total energy = 3397.9133 kcal/mol (3391.5299 without restraints) Performing minimization step: 3007. Total energy = 3397.8228 kcal/mol (3391.4452 without restraints) Performing minimization step: 3008. Total energy = 3397.7292 kcal/mol (3391.3481 without restraints) Performing minimization step: 3009. Total energy = 3397.6385 kcal/mol (3391.2633 without restraints) Performing minimization step: 3010. Total energy = 3397.5451 kcal/mol (3391.1664 without restraints) Performing minimization step: 3011. Total energy = 3397.4547 kcal/mol (3391.0819 without restraints) Performing minimization step: 3012. Total energy = 3397.3617 kcal/mol (3390.9853 without restraints) Performing minimization step: 3013. Total energy = 3397.2713 kcal/mol (3390.9008 without restraints) Performing minimization step: 3014. Total energy = 3397.1783 kcal/mol (3390.8043 without restraints) Performing minimization step: 3015. Total energy = 3397.0883 kcal/mol (3390.7201 without restraints) Performing minimization step: 3016. Total energy = 3396.9954 kcal/mol (3390.6236 without restraints) Performing minimization step: 3017. Total energy = 3396.9058 kcal/mol (3390.5400 without restraints) Performing minimization step: 3018. Total energy = 3396.8132 kcal/mol (3390.4439 without restraints) Performing minimization step: 3019. Total energy = 3396.7236 kcal/mol (3390.3599 without restraints) Performing minimization step: 3020. Total energy = 3396.6307 kcal/mol (3390.2636 without restraints) Performing minimization step: 3021. Total energy = 3396.5403 kcal/mol (3390.1788 without restraints) Performing minimization step: 3022. Total energy = 3396.4475 kcal/mol (3390.0828 without restraints) Performing minimization step: 3023. Total energy = 3396.3578 kcal/mol (3389.9989 without restraints) Performing minimization step: 3024. Total energy = 3396.2657 kcal/mol (3389.9033 without restraints) Performing minimization step: 3025. Total energy = 3396.1764 kcal/mol (3389.8198 without restraints) Performing minimization step: 3026. Total energy = 3396.0841 kcal/mol (3389.7239 without restraints) Performing minimization step: 3027. Total energy = 3395.9947 kcal/mol (3389.6405 without restraints) Performing minimization step: 3028. Total energy = 3395.9026 kcal/mol (3389.5448 without restraints) Performing minimization step: 3029. Total energy = 3395.8135 kcal/mol (3389.4615 without restraints) Performing minimization step: 3030. Total energy = 3395.7215 kcal/mol (3389.3660 without restraints) Performing minimization step: 3031. Total energy = 3395.6319 kcal/mol (3389.2823 without restraints) Performing minimization step: 3032. Total energy = 3395.5401 kcal/mol (3389.1869 without restraints) Performing minimization step: 3033. Total energy = 3395.4506 kcal/mol (3389.1032 without restraints) Performing minimization step: 3034. Total energy = 3395.3589 kcal/mol (3389.0079 without restraints) Performing minimization step: 3035. Total energy = 3395.2699 kcal/mol (3388.9247 without restraints) Performing minimization step: 3036. Total energy = 3395.1781 kcal/mol (3388.8296 without restraints) Performing minimization step: 3037. Total energy = 3395.0895 kcal/mol (3388.7468 without restraints) Performing minimization step: 3038. Total energy = 3394.9981 kcal/mol (3388.6519 without restraints) Performing minimization step: 3039. Total energy = 3394.9098 kcal/mol (3388.5694 without restraints) Performing minimization step: 3040. Total energy = 3394.8187 kcal/mol (3388.4748 without restraints) Performing minimization step: 3041. Total energy = 3394.7305 kcal/mol (3388.3924 without restraints) Performing minimization step: 3042. Total energy = 3394.6393 kcal/mol (3388.2975 without restraints) Performing minimization step: 3043. Total energy = 3394.5502 kcal/mol (3388.2144 without restraints) Performing minimization step: 3044. Total energy = 3394.4591 kcal/mol (3388.1197 without restraints) Performing minimization step: 3045. Total energy = 3394.3710 kcal/mol (3388.0375 without restraints) Performing minimization step: 3046. Total energy = 3394.2801 kcal/mol (3387.9431 without restraints) Performing minimization step: 3047. Total energy = 3394.1925 kcal/mol (3387.8615 without restraints) Performing minimization step: 3048. Total energy = 3394.1019 kcal/mol (3387.7671 without restraints) Performing minimization step: 3049. Total energy = 3394.0138 kcal/mol (3387.6849 without restraints) Performing minimization step: 3050. Total energy = 3393.9234 kcal/mol (3387.5909 without restraints) Performing minimization step: 3051. Total energy = 3393.8356 kcal/mol (3387.5090 without restraints) Performing minimization step: 3052. Total energy = 3393.7453 kcal/mol (3387.4151 without restraints) Performing minimization step: 3053. Total energy = 3393.6578 kcal/mol (3387.3334 without restraints) Performing minimization step: 3054. Total energy = 3393.5674 kcal/mol (3387.2395 without restraints) Performing minimization step: 3055. Total energy = 3393.4800 kcal/mol (3387.1580 without restraints) Performing minimization step: 3056. Total energy = 3393.3898 kcal/mol (3387.0641 without restraints) Performing minimization step: 3057. Total energy = 3393.3029 kcal/mol (3386.9831 without restraints) Performing minimization step: 3058. Total energy = 3393.2130 kcal/mol (3386.8896 without restraints) Performing minimization step: 3059. Total energy = 3393.1258 kcal/mol (3386.8083 without restraints) Performing minimization step: 3060. Total energy = 3393.0357 kcal/mol (3386.7146 without restraints) Performing minimization step: 3061. Total energy = 3392.9487 kcal/mol (3386.6333 without restraints) Performing minimization step: 3062. Total energy = 3392.8588 kcal/mol (3386.5398 without restraints) Performing minimization step: 3063. Total energy = 3392.7719 kcal/mol (3386.4588 without restraints) Performing minimization step: 3064. Total energy = 3392.6819 kcal/mol (3386.3652 without restraints) Performing minimization step: 3065. Total energy = 3392.5948 kcal/mol (3386.2841 without restraints) Performing minimization step: 3066. Total energy = 3392.5050 kcal/mol (3386.1908 without restraints) Performing minimization step: 3067. Total energy = 3392.4180 kcal/mol (3386.1096 without restraints) Performing minimization step: 3068. Total energy = 3392.3286 kcal/mol (3386.0166 without restraints) Performing minimization step: 3069. Total energy = 3392.2422 kcal/mol (3385.9360 without restraints) Performing minimization step: 3070. Total energy = 3392.1526 kcal/mol (3385.8428 without restraints) Performing minimization step: 3071. Total energy = 3392.0660 kcal/mol (3385.7621 without restraints) Performing minimization step: 3072. Total energy = 3391.9768 kcal/mol (3385.6693 without restraints) Performing minimization step: 3073. Total energy = 3391.8907 kcal/mol (3385.5891 without restraints) Performing minimization step: 3074. Total energy = 3391.8017 kcal/mol (3385.4964 without restraints) Performing minimization step: 3075. Total energy = 3391.7158 kcal/mol (3385.4165 without restraints) Performing minimization step: 3076. Total energy = 3391.6272 kcal/mol (3385.3242 without restraints) Performing minimization step: 3077. Total energy = 3391.5414 kcal/mol (3385.2443 without restraints) Performing minimization step: 3078. Total energy = 3391.4526 kcal/mol (3385.1518 without restraints) Performing minimization step: 3079. Total energy = 3391.3664 kcal/mol (3385.0716 without restraints) Performing minimization step: 3080. Total energy = 3391.2773 kcal/mol (3384.9788 without restraints) Performing minimization step: 3081. Total energy = 3391.1911 kcal/mol (3384.8985 without restraints) Performing minimization step: 3082. Total energy = 3391.1025 kcal/mol (3384.8064 without restraints) Performing minimization step: 3083. Total energy = 3391.0171 kcal/mol (3384.7267 without restraints) Performing minimization step: 3084. Total energy = 3390.9283 kcal/mol (3384.6343 without restraints) Performing minimization step: 3085. Total energy = 3390.8429 kcal/mol (3384.5548 without restraints) Performing minimization step: 3086. Total energy = 3390.7540 kcal/mol (3384.4622 without restraints) Performing minimization step: 3087. Total energy = 3390.6685 kcal/mol (3384.3826 without restraints) Performing minimization step: 3088. Total energy = 3390.5803 kcal/mol (3384.2908 without restraints) Performing minimization step: 3089. Total energy = 3390.4954 kcal/mol (3384.2117 without restraints) Performing minimization step: 3090. Total energy = 3390.4076 kcal/mol (3384.1203 without restraints) Performing minimization step: 3091. Total energy = 3390.3221 kcal/mol (3384.0407 without restraints) Performing minimization step: 3092. Total energy = 3390.2345 kcal/mol (3383.9494 without restraints) Performing minimization step: 3093. Total energy = 3390.1495 kcal/mol (3383.8703 without restraints) Performing minimization step: 3094. Total energy = 3390.0615 kcal/mol (3383.7787 without restraints) Performing minimization step: 3095. Total energy = 3389.9766 kcal/mol (3383.6996 without restraints) Performing minimization step: 3096. Total energy = 3389.8888 kcal/mol (3383.6081 without restraints) Performing minimization step: 3097. Total energy = 3389.8037 kcal/mol (3383.5290 without restraints) Performing minimization step: 3098. Total energy = 3389.7162 kcal/mol (3383.4378 without restraints) Performing minimization step: 3099. Total energy = 3389.6317 kcal/mol (3383.3592 without restraints) Performing minimization step: 3100. Total energy = 3389.5443 kcal/mol (3383.2682 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e0aaf9ce/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 3101. Total energy = 3389.4600 kcal/mol (3383.1899 without restraints) Performing minimization step: 3102. Total energy = 3389.3729 kcal/mol (3383.0990 without restraints) Performing minimization step: 3103. Total energy = 3389.2886 kcal/mol (3383.0206 without restraints) Performing minimization step: 3104. Total energy = 3389.2016 kcal/mol (3382.9299 without restraints) Performing minimization step: 3105. Total energy = 3389.1175 kcal/mol (3382.8516 without restraints) Performing minimization step: 3106. Total energy = 3389.0307 kcal/mol (3382.7612 without restraints) Performing minimization step: 3107. Total energy = 3388.9468 kcal/mol (3382.6833 without restraints) Performing minimization step: 3108. Total energy = 3388.8600 kcal/mol (3382.5927 without restraints) Performing minimization step: 3109. Total energy = 3388.7756 kcal/mol (3382.5141 without restraints) Performing minimization step: 3110. Total energy = 3388.6885 kcal/mol (3382.4235 without restraints) Performing minimization step: 3111. Total energy = 3388.6046 kcal/mol (3382.3453 without restraints) Performing minimization step: 3112. Total energy = 3388.5179 kcal/mol (3382.2550 without restraints) Performing minimization step: 3113. Total energy = 3388.4342 kcal/mol (3382.1773 without restraints) Performing minimization step: 3114. Total energy = 3388.3476 kcal/mol (3382.0869 without restraints) Performing minimization step: 3115. Total energy = 3388.2636 kcal/mol (3382.0087 without restraints) Performing minimization step: 3116. Total energy = 3388.1770 kcal/mol (3381.9186 without restraints) Performing minimization step: 3117. Total energy = 3388.0934 kcal/mol (3381.8409 without restraints) Performing minimization step: 3118. Total energy = 3388.0073 kcal/mol (3381.7511 without restraints) Performing minimization step: 3119. Total energy = 3387.9240 kcal/mol (3381.6737 without restraints) Performing minimization step: 3120. Total energy = 3387.8377 kcal/mol (3381.5837 without restraints) Performing minimization step: 3121. Total energy = 3387.7546 kcal/mol (3381.5064 without restraints) Performing minimization step: 3122. Total energy = 3387.6684 kcal/mol (3381.4166 without restraints) Performing minimization step: 3123. Total energy = 3387.5855 kcal/mol (3381.3395 without restraints) Performing minimization step: 3124. Total energy = 3387.4994 kcal/mol (3381.2498 without restraints) Performing minimization step: 3125. Total energy = 3387.4164 kcal/mol (3381.1727 without restraints) Performing minimization step: 3126. Total energy = 3387.3311 kcal/mol (3381.0837 without restraints) Performing minimization step: 3127. Total energy = 3387.2481 kcal/mol (3381.0065 without restraints) Performing minimization step: 3128. Total energy = 3387.1625 kcal/mol (3380.9173 without restraints) Performing minimization step: 3129. Total energy = 3387.0805 kcal/mol (3380.8412 without restraints) Performing minimization step: 3130. Total energy = 3386.9952 kcal/mol (3380.7523 without restraints) Performing minimization step: 3131. Total energy = 3386.9129 kcal/mol (3380.6758 without restraints) Performing minimization step: 3132. Total energy = 3386.8278 kcal/mol (3380.5869 without restraints) Performing minimization step: 3133. Total energy = 3386.7455 kcal/mol (3380.5105 without restraints) Performing minimization step: 3134. Total energy = 3386.6605 kcal/mol (3380.4219 without restraints) Performing minimization step: 3135. Total energy = 3386.5782 kcal/mol (3380.3454 without restraints) Performing minimization step: 3136. Total energy = 3386.4928 kcal/mol (3380.2564 without restraints) Performing minimization step: 3137. Total energy = 3386.4111 kcal/mol (3380.1805 without restraints) Performing minimization step: 3138. Total energy = 3386.3259 kcal/mol (3380.0916 without restraints) Performing minimization step: 3139. Total energy = 3386.2438 kcal/mol (3380.0154 without restraints) Performing minimization step: 3140. Total energy = 3386.1586 kcal/mol (3379.9265 without restraints) Performing minimization step: 3141. Total energy = 3386.0769 kcal/mol (3379.8507 without restraints) Performing minimization step: 3142. Total energy = 3385.9921 kcal/mol (3379.7621 without restraints) Performing minimization step: 3143. Total energy = 3385.9105 kcal/mol (3379.6864 without restraints) Performing minimization step: 3144. Total energy = 3385.8259 kcal/mol (3379.5981 without restraints) Performing minimization step: 3145. Total energy = 3385.7442 kcal/mol (3379.5223 without restraints) Performing minimization step: 3146. Total energy = 3385.6595 kcal/mol (3379.4339 without restraints) Performing minimization step: 3147. Total energy = 3385.5778 kcal/mol (3379.3580 without restraints) Performing minimization step: 3148. Total energy = 3385.4934 kcal/mol (3379.2700 without restraints) Performing minimization step: 3149. Total energy = 3385.4121 kcal/mol (3379.1944 without restraints) Performing minimization step: 3150. Total energy = 3385.3275 kcal/mol (3379.1061 without restraints) Performing minimization step: 3151. Total energy = 3385.2463 kcal/mol (3379.0309 without restraints) Performing minimization step: 3152. Total energy = 3385.1616 kcal/mol (3378.9425 without restraints) Performing minimization step: 3153. Total energy = 3385.0804 kcal/mol (3378.8672 without restraints) Performing minimization step: 3154. Total energy = 3384.9965 kcal/mol (3378.7795 without restraints) Performing minimization step: 3155. Total energy = 3384.9158 kcal/mol (3378.7047 without restraints) Performing minimization step: 3156. Total energy = 3384.8324 kcal/mol (3378.6179 without restraints) Performing minimization step: 3157. Total energy = 3384.7520 kcal/mol (3378.5431 without restraints) Performing minimization step: 3158. Total energy = 3384.6684 kcal/mol (3378.4557 without restraints) Performing minimization step: 3159. Total energy = 3384.5878 kcal/mol (3378.3810 without restraints) Performing minimization step: 3160. Total energy = 3384.5042 kcal/mol (3378.2937 without restraints) Performing minimization step: 3161. Total energy = 3384.4238 kcal/mol (3378.2192 without restraints) Performing minimization step: 3162. Total energy = 3384.3403 kcal/mol (3378.1320 without restraints) Performing minimization step: 3163. Total energy = 3384.2599 kcal/mol (3378.0575 without restraints) Performing minimization step: 3164. Total energy = 3384.1766 kcal/mol (3377.9704 without restraints) Performing minimization step: 3165. Total energy = 3384.0966 kcal/mol (3377.8963 without restraints) Performing minimization step: 3166. Total energy = 3384.0135 kcal/mol (3377.8094 without restraints) Performing minimization step: 3167. Total energy = 3383.9332 kcal/mol (3377.7350 without restraints) Performing minimization step: 3168. Total energy = 3383.8503 kcal/mol (3377.6484 without restraints) Performing minimization step: 3169. Total energy = 3383.7704 kcal/mol (3377.5744 without restraints) Performing minimization step: 3170. Total energy = 3383.6878 kcal/mol (3377.4880 without restraints) Performing minimization step: 3171. Total energy = 3383.6080 kcal/mol (3377.4143 without restraints) Performing minimization step: 3172. Total energy = 3383.5254 kcal/mol (3377.3279 without restraints) Performing minimization step: 3173. Total energy = 3383.4456 kcal/mol (3377.2539 without restraints) Performing minimization step: 3174. Total energy = 3383.3630 kcal/mol (3377.1675 without restraints) Performing minimization step: 3175. Total energy = 3383.2832 kcal/mol (3377.0936 without restraints) Performing minimization step: 3176. Total energy = 3383.2011 kcal/mol (3377.0077 without restraints) Performing minimization step: 3177. Total energy = 3383.1216 kcal/mol (3376.9342 without restraints) Performing minimization step: 3178. Total energy = 3383.0390 kcal/mol (3376.8477 without restraints) Performing minimization step: 3179. Total energy = 3382.9592 kcal/mol (3376.7738 without restraints) Performing minimization step: 3180. Total energy = 3382.8768 kcal/mol (3376.6878 without restraints) Performing minimization step: 3181. Total energy = 3382.7980 kcal/mol (3376.6149 without restraints) Performing minimization step: 3182. Total energy = 3382.7161 kcal/mol (3376.5292 without restraints) Performing minimization step: 3183. Total energy = 3382.6369 kcal/mol (3376.4558 without restraints) Performing minimization step: 3184. Total energy = 3382.5548 kcal/mol (3376.3700 without restraints) Performing minimization step: 3185. Total energy = 3382.4758 kcal/mol (3376.2969 without restraints) Performing minimization step: 3186. Total energy = 3382.3943 kcal/mol (3376.2117 without restraints) Performing minimization step: 3187. Total energy = 3382.3157 kcal/mol (3376.1389 without restraints) Performing minimization step: 3188. Total energy = 3382.2337 kcal/mol (3376.0531 without restraints) Performing minimization step: 3189. Total energy = 3382.1550 kcal/mol (3375.9804 without restraints) Performing minimization step: 3190. Total energy = 3382.0737 kcal/mol (3375.8953 without restraints) Performing minimization step: 3191. Total energy = 3381.9949 kcal/mol (3375.8224 without restraints) Performing minimization step: 3192. Total energy = 3381.9135 kcal/mol (3375.7371 without restraints) Performing minimization step: 3193. Total energy = 3381.8348 kcal/mol (3375.6644 without restraints) Performing minimization step: 3194. Total energy = 3381.7534 kcal/mol (3375.5792 without restraints) Performing minimization step: 3195. Total energy = 3381.6751 kcal/mol (3375.5068 without restraints) Performing minimization step: 3196. Total energy = 3381.5939 kcal/mol (3375.4218 without restraints) Performing minimization step: 3197. Total energy = 3381.5157 kcal/mol (3375.3495 without restraints) Performing minimization step: 3198. Total energy = 3381.4346 kcal/mol (3375.2646 without restraints) Performing minimization step: 3199. Total energy = 3381.3564 kcal/mol (3375.1922 without restraints) Performing minimization step: 3200. Total energy = 3381.2752 kcal/mol (3375.1073 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e0aaf9ce/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 3201. Total energy = 3381.1972 kcal/mol (3375.0352 without restraints) Performing minimization step: 3202. Total energy = 3381.1163 kcal/mol (3374.9505 without restraints) Performing minimization step: 3203. Total energy = 3381.0384 kcal/mol (3374.8786 without restraints) Performing minimization step: 3204. Total energy = 3380.9574 kcal/mol (3374.7938 without restraints) Performing minimization step: 3205. Total energy = 3380.8799 kcal/mol (3374.7220 without restraints) Performing minimization step: 3206. Total energy = 3380.7991 kcal/mol (3374.6375 without restraints) Performing minimization step: 3207. Total energy = 3380.7215 kcal/mol (3374.5658 without restraints) Performing minimization step: 3208. Total energy = 3380.6412 kcal/mol (3374.4817 without restraints) Performing minimization step: 3209. Total energy = 3380.5640 kcal/mol (3374.4104 without restraints) Performing minimization step: 3210. Total energy = 3380.4838 kcal/mol (3374.3264 without restraints) Performing minimization step: 3211. Total energy = 3380.4065 kcal/mol (3374.2550 without restraints) Performing minimization step: 3212. Total energy = 3380.3262 kcal/mol (3374.1709 without restraints) Performing minimization step: 3213. Total energy = 3380.2490 kcal/mol (3374.0996 without restraints) Performing minimization step: 3214. Total energy = 3380.1688 kcal/mol (3374.0156 without restraints) Performing minimization step: 3215. Total energy = 3380.0915 kcal/mol (3373.9442 without restraints) Performing minimization step: 3216. Total energy = 3380.0115 kcal/mol (3373.8604 without restraints) Performing minimization step: 3217. Total energy = 3379.9347 kcal/mol (3373.7896 without restraints) Performing minimization step: 3218. Total energy = 3379.8548 kcal/mol (3373.7058 without restraints) Performing minimization step: 3219. Total energy = 3379.7780 kcal/mol (3373.6348 without restraints) Performing minimization step: 3220. Total energy = 3379.6980 kcal/mol (3373.5510 without restraints) Performing minimization step: 3221. Total energy = 3379.6212 kcal/mol (3373.4802 without restraints) Performing minimization step: 3222. Total energy = 3379.5419 kcal/mol (3373.3970 without restraints) Performing minimization step: 3223. Total energy = 3379.4653 kcal/mol (3373.3265 without restraints) Performing minimization step: 3224. Total energy = 3379.3858 kcal/mol (3373.2430 without restraints) Performing minimization step: 3225. Total energy = 3379.3093 kcal/mol (3373.1725 without restraints) Performing minimization step: 3226. Total energy = 3379.2294 kcal/mol (3373.0887 without restraints) Performing minimization step: 3227. Total energy = 3379.1533 kcal/mol (3373.0185 without restraints) Performing minimization step: 3228. Total energy = 3379.0737 kcal/mol (3372.9351 without restraints) Performing minimization step: 3229. Total energy = 3378.9970 kcal/mol (3372.8644 without restraints) Performing minimization step: 3230. Total energy = 3378.9180 kcal/mol (3372.7814 without restraints) Performing minimization step: 3231. Total energy = 3378.8420 kcal/mol (3372.7115 without restraints) Performing minimization step: 3232. Total energy = 3378.7630 kcal/mol (3372.6285 without restraints) Performing minimization step: 3233. Total energy = 3378.6865 kcal/mol (3372.5579 without restraints) Performing minimization step: 3234. Total energy = 3378.6076 kcal/mol (3372.4752 without restraints) Performing minimization step: 3235. Total energy = 3378.5315 kcal/mol (3372.4049 without restraints) Performing minimization step: 3236. Total energy = 3378.4524 kcal/mol (3372.3221 without restraints) Performing minimization step: 3237. Total energy = 3378.3768 kcal/mol (3372.2524 without restraints) Performing minimization step: 3238. Total energy = 3378.2976 kcal/mol (3372.1693 without restraints) Performing minimization step: 3239. Total energy = 3378.2216 kcal/mol (3372.0992 without restraints) Performing minimization step: 3240. Total energy = 3378.1429 kcal/mol (3372.0167 without restraints) Performing minimization step: 3241. Total energy = 3378.0674 kcal/mol (3371.9471 without restraints) Performing minimization step: 3242. Total energy = 3377.9887 kcal/mol (3371.8644 without restraints) Performing minimization step: 3243. Total energy = 3377.9134 kcal/mol (3371.7952 without restraints) Performing minimization step: 3244. Total energy = 3377.8348 kcal/mol (3371.7126 without restraints) Performing minimization step: 3245. Total energy = 3377.7595 kcal/mol (3371.6433 without restraints) Performing minimization step: 3246. Total energy = 3377.6812 kcal/mol (3371.5611 without restraints) Performing minimization step: 3247. Total energy = 3377.6060 kcal/mol (3371.4919 without restraints) Performing minimization step: 3248. Total energy = 3377.5269 kcal/mol (3371.4087 without restraints) Performing minimization step: 3249. Total energy = 3377.4516 kcal/mol (3371.3395 without restraints) Performing minimization step: 3250. Total energy = 3377.3735 kcal/mol (3371.2575 without restraints) Performing minimization step: 3251. Total energy = 3377.2984 kcal/mol (3371.1883 without restraints) Performing minimization step: 3252. Total energy = 3377.2204 kcal/mol (3371.1065 without restraints) Performing minimization step: 3253. Total energy = 3377.1455 kcal/mol (3371.0375 without restraints) Performing minimization step: 3254. Total energy = 3377.0677 kcal/mol (3370.9558 without restraints) Performing minimization step: 3255. Total energy = 3376.9931 kcal/mol (3370.8872 without restraints) Performing minimization step: 3256. Total energy = 3376.9155 kcal/mol (3370.8056 without restraints) Performing minimization step: 3257. Total energy = 3376.8408 kcal/mol (3370.7368 without restraints) Performing minimization step: 3258. Total energy = 3376.7634 kcal/mol (3370.6556 without restraints) Performing minimization step: 3259. Total energy = 3376.6890 kcal/mol (3370.5870 without restraints) Performing minimization step: 3260. Total energy = 3376.6110 kcal/mol (3370.5052 without restraints) Performing minimization step: 3261. Total energy = 3376.5369 kcal/mol (3370.4371 without restraints) Performing minimization step: 3262. Total energy = 3376.4593 kcal/mol (3370.3556 without restraints) Performing minimization step: 3263. Total energy = 3376.3846 kcal/mol (3370.2869 without restraints) Performing minimization step: 3264. Total energy = 3376.3074 kcal/mol (3370.2057 without restraints) Performing minimization step: 3265. Total energy = 3376.2331 kcal/mol (3370.1374 without restraints) Performing minimization step: 3266. Total energy = 3376.1559 kcal/mol (3370.0563 without restraints) Performing minimization step: 3267. Total energy = 3376.0820 kcal/mol (3369.9884 without restraints) Performing minimization step: 3268. Total energy = 3376.0047 kcal/mol (3369.9071 without restraints) Performing minimization step: 3269. Total energy = 3375.9309 kcal/mol (3369.8393 without restraints) Performing minimization step: 3270. Total energy = 3375.8538 kcal/mol (3369.7582 without restraints) Performing minimization step: 3271. Total energy = 3375.7798 kcal/mol (3369.6904 without restraints) Performing minimization step: 3272. Total energy = 3375.7027 kcal/mol (3369.6091 without restraints) Performing minimization step: 3273. Total energy = 3375.6291 kcal/mol (3369.5415 without restraints) Performing minimization step: 3274. Total energy = 3375.5522 kcal/mol (3369.4607 without restraints) Performing minimization step: 3275. Total energy = 3375.4787 kcal/mol (3369.3931 without restraints) Performing minimization step: 3276. Total energy = 3375.4019 kcal/mol (3369.3124 without restraints) Performing minimization step: 3277. Total energy = 3375.3285 kcal/mol (3369.2451 without restraints) Performing minimization step: 3278. Total energy = 3375.2517 kcal/mol (3369.1642 without restraints) Performing minimization step: 3279. Total energy = 3375.1786 kcal/mol (3369.0970 without restraints) Performing minimization step: 3280. Total energy = 3375.1022 kcal/mol (3369.0167 without restraints) Performing minimization step: 3281. Total energy = 3375.0293 kcal/mol (3368.9499 without restraints) Performing minimization step: 3282. Total energy = 3374.9529 kcal/mol (3368.8695 without restraints) Performing minimization step: 3283. Total energy = 3374.8796 kcal/mol (3368.8020 without restraints) Performing minimization step: 3284. Total energy = 3374.8032 kcal/mol (3368.7218 without restraints) Performing minimization step: 3285. Total energy = 3374.7304 kcal/mol (3368.6549 without restraints) Performing minimization step: 3286. Total energy = 3374.6544 kcal/mol (3368.5750 without restraints) Performing minimization step: 3287. Total energy = 3374.5818 kcal/mol (3368.5083 without restraints) Performing minimization step: 3288. Total energy = 3374.5056 kcal/mol (3368.4282 without restraints) Performing minimization step: 3289. Total energy = 3374.4331 kcal/mol (3368.3616 without restraints) Performing minimization step: 3290. Total energy = 3374.3568 kcal/mol (3368.2814 without restraints) Performing minimization step: 3291. Total energy = 3374.2843 kcal/mol (3368.2148 without restraints) Performing minimization step: 3292. Total energy = 3374.2084 kcal/mol (3368.1349 without restraints) Performing minimization step: 3293. Total energy = 3374.1360 kcal/mol (3368.0686 without restraints) Performing minimization step: 3294. Total energy = 3374.0603 kcal/mol (3367.9889 without restraints) Performing minimization step: 3295. Total energy = 3373.9881 kcal/mol (3367.9226 without restraints) Performing minimization step: 3296. Total energy = 3373.9125 kcal/mol (3367.8431 without restraints) Performing minimization step: 3297. Total energy = 3373.8403 kcal/mol (3367.7768 without restraints) Performing minimization step: 3298. Total energy = 3373.7647 kcal/mol (3367.6973 without restraints) Performing minimization step: 3299. Total energy = 3373.6934 kcal/mol (3367.6320 without restraints) Performing minimization step: 3300. Total energy = 3373.6180 kcal/mol (3367.5526 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e0aaf9ce/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 3301. Total energy = 3373.5465 kcal/mol (3367.4870 without restraints) Performing minimization step: 3302. Total energy = 3373.4713 kcal/mol (3367.4079 without restraints) Performing minimization step: 3303. Total energy = 3373.3995 kcal/mol (3367.3420 without restraints) Performing minimization step: 3304. Total energy = 3373.3242 kcal/mol (3367.2628 without restraints) Performing minimization step: 3305. Total energy = 3373.2525 kcal/mol (3367.1971 without restraints) Performing minimization step: 3306. Total energy = 3373.1774 kcal/mol (3367.1180 without restraints) Performing minimization step: 3307. Total energy = 3373.1060 kcal/mol (3367.0525 without restraints) Performing minimization step: 3308. Total energy = 3373.0311 kcal/mol (3366.9735 without restraints) Performing minimization step: 3309. Total energy = 3372.9596 kcal/mol (3366.9082 without restraints) Performing minimization step: 3310. Total energy = 3372.8848 kcal/mol (3366.8293 without restraints) Performing minimization step: 3311. Total energy = 3372.8134 kcal/mol (3366.7638 without restraints) Performing minimization step: 3312. Total energy = 3372.7384 kcal/mol (3366.6848 without restraints) Performing minimization step: 3313. Total energy = 3372.6672 kcal/mol (3366.6195 without restraints) Performing minimization step: 3314. Total energy = 3372.5924 kcal/mol (3366.5408 without restraints) Performing minimization step: 3315. Total energy = 3372.5210 kcal/mol (3366.4754 without restraints) Performing minimization step: 3316. Total energy = 3372.4464 kcal/mol (3366.3968 without restraints) Performing minimization step: 3317. Total energy = 3372.3753 kcal/mol (3366.3317 without restraints) Performing minimization step: 3318. Total energy = 3372.3011 kcal/mol (3366.2533 without restraints) Performing minimization step: 3319. Total energy = 3372.2295 kcal/mol (3366.1879 without restraints) Performing minimization step: 3320. Total energy = 3372.1552 kcal/mol (3366.1097 without restraints) Performing minimization step: 3321. Total energy = 3372.0842 kcal/mol (3366.0445 without restraints) Performing minimization step: 3322. Total energy = 3372.0097 kcal/mol (3365.9662 without restraints) Performing minimization step: 3323. Total energy = 3371.9386 kcal/mol (3365.9009 without restraints) Performing minimization step: 3324. Total energy = 3371.8646 kcal/mol (3365.8230 without restraints) Performing minimization step: 3325. Total energy = 3371.7936 kcal/mol (3365.7579 without restraints) Performing minimization step: 3326. Total energy = 3371.7196 kcal/mol (3365.6798 without restraints) Performing minimization step: 3327. Total energy = 3371.6487 kcal/mol (3365.6150 without restraints) Performing minimization step: 3328. Total energy = 3371.5745 kcal/mol (3365.5368 without restraints) Performing minimization step: 3329. Total energy = 3371.5035 kcal/mol (3365.4717 without restraints) Performing minimization step: 3330. Total energy = 3371.4293 kcal/mol (3365.3936 without restraints) Performing minimization step: 3331. Total energy = 3371.3588 kcal/mol (3365.3290 without restraints) Performing minimization step: 3332. Total energy = 3371.2852 kcal/mol (3365.2515 without restraints) Performing minimization step: 3333. Total energy = 3371.2148 kcal/mol (3365.1870 without restraints) Performing minimization step: 3334. Total energy = 3371.1414 kcal/mol (3365.1096 without restraints) Performing minimization step: 3335. Total energy = 3371.0711 kcal/mol (3365.0452 without restraints) Performing minimization step: 3336. Total energy = 3370.9973 kcal/mol (3364.9675 without restraints) Performing minimization step: 3337. Total energy = 3370.9270 kcal/mol (3364.9029 without restraints) Performing minimization step: 3338. Total energy = 3370.8534 kcal/mol (3364.8255 without restraints) Performing minimization step: 3339. Total energy = 3370.7833 kcal/mol (3364.7613 without restraints) Performing minimization step: 3340. Total energy = 3370.7101 kcal/mol (3364.6842 without restraints) Performing minimization step: 3341. Total energy = 3370.6397 kcal/mol (3364.6195 without restraints) Performing minimization step: 3342. Total energy = 3370.5662 kcal/mol (3364.5422 without restraints) Performing minimization step: 3343. Total energy = 3370.4964 kcal/mol (3364.4785 without restraints) Performing minimization step: 3344. Total energy = 3370.4239 kcal/mol (3364.4021 without restraints) Performing minimization step: 3345. Total energy = 3370.3541 kcal/mol (3364.3380 without restraints) Performing minimization step: 3346. Total energy = 3370.2816 kcal/mol (3364.2616 without restraints) Performing minimization step: 3347. Total energy = 3370.2121 kcal/mol (3364.1978 without restraints) Performing minimization step: 3348. Total energy = 3370.1393 kcal/mol (3364.1211 without restraints) Performing minimization step: 3349. Total energy = 3370.0698 kcal/mol (3364.0577 without restraints) Performing minimization step: 3350. Total energy = 3369.9972 kcal/mol (3363.9810 without restraints) Performing minimization step: 3351. Total energy = 3369.9273 kcal/mol (3363.9168 without restraints) Performing minimization step: 3352. Total energy = 3369.8544 kcal/mol (3363.8400 without restraints) Performing minimization step: 3353. Total energy = 3369.7849 kcal/mol (3363.7766 without restraints) Performing minimization step: 3354. Total energy = 3369.7124 kcal/mol (3363.7001 without restraints) Performing minimization step: 3355. Total energy = 3369.6431 kcal/mol (3363.6367 without restraints) Performing minimization step: 3356. Total energy = 3369.5707 kcal/mol (3363.5604 without restraints) Performing minimization step: 3357. Total energy = 3369.5014 kcal/mol (3363.4971 without restraints) Performing minimization step: 3358. Total energy = 3369.4289 kcal/mol (3363.4204 without restraints) Performing minimization step: 3359. Total energy = 3369.3597 kcal/mol (3363.3571 without restraints) Performing minimization step: 3360. Total energy = 3369.2875 kcal/mol (3363.2810 without restraints) Performing minimization step: 3361. Total energy = 3369.2186 kcal/mol (3363.2181 without restraints) Performing minimization step: 3362. Total energy = 3369.1462 kcal/mol (3363.1416 without restraints) Performing minimization step: 3363. Total energy = 3369.0774 kcal/mol (3363.0789 without restraints) Performing minimization step: 3364. Total energy = 3369.0055 kcal/mol (3363.0028 without restraints) Performing minimization step: 3365. Total energy = 3368.9368 kcal/mol (3362.9402 without restraints) Performing minimization step: 3366. Total energy = 3368.8651 kcal/mol (3362.8644 without restraints) Performing minimization step: 3367. Total energy = 3368.7965 kcal/mol (3362.8017 without restraints) Performing minimization step: 3368. Total energy = 3368.7243 kcal/mol (3362.7255 without restraints) Performing minimization step: 3369. Total energy = 3368.6554 kcal/mol (3362.6626 without restraints) Performing minimization step: 3370. Total energy = 3368.5836 kcal/mol (3362.5867 without restraints) Performing minimization step: 3371. Total energy = 3368.5152 kcal/mol (3362.5243 without restraints) Performing minimization step: 3372. Total energy = 3368.4435 kcal/mol (3362.4485 without restraints) Performing minimization step: 3373. Total energy = 3368.3751 kcal/mol (3362.3862 without restraints) Performing minimization step: 3374. Total energy = 3368.3036 kcal/mol (3362.3105 without restraints) Performing minimization step: 3375. Total energy = 3368.2351 kcal/mol (3362.2481 without restraints) Performing minimization step: 3376. Total energy = 3368.1632 kcal/mol (3362.1720 without restraints) Performing minimization step: 3377. Total energy = 3368.0951 kcal/mol (3362.1100 without restraints) Performing minimization step: 3378. Total energy = 3368.0238 kcal/mol (3362.0346 without restraints) Performing minimization step: 3379. Total energy = 3367.9558 kcal/mol (3361.9726 without restraints) Performing minimization step: 3380. Total energy = 3367.8841 kcal/mol (3361.8968 without restraints) Performing minimization step: 3381. Total energy = 3367.8163 kcal/mol (3361.8350 without restraints) Performing minimization step: 3382. Total energy = 3367.7451 kcal/mol (3361.7597 without restraints) Performing minimization step: 3383. Total energy = 3367.6773 kcal/mol (3361.6979 without restraints) Performing minimization step: 3384. Total energy = 3367.6063 kcal/mol (3361.6227 without restraints) Performing minimization step: 3385. Total energy = 3367.5385 kcal/mol (3361.5609 without restraints) Performing minimization step: 3386. Total energy = 3367.4672 kcal/mol (3361.4856 without restraints) Performing minimization step: 3387. Total energy = 3367.4001 kcal/mol (3361.4244 without restraints) Performing minimization step: 3388. Total energy = 3367.3286 kcal/mol (3361.3489 without restraints) Performing minimization step: 3389. Total energy = 3367.2615 kcal/mol (3361.2878 without restraints) Performing minimization step: 3390. Total energy = 3367.1900 kcal/mol (3361.2120 without restraints) Performing minimization step: 3391. Total energy = 3367.1225 kcal/mol (3361.1506 without restraints) Performing minimization step: 3392. Total energy = 3367.0516 kcal/mol (3361.0757 without restraints) Performing minimization step: 3393. Total energy = 3366.9844 kcal/mol (3361.0145 without restraints) Performing minimization step: 3394. Total energy = 3366.9136 kcal/mol (3360.9396 without restraints) Performing minimization step: 3395. Total energy = 3366.8462 kcal/mol (3360.8781 without restraints) Performing minimization step: 3396. Total energy = 3366.7760 kcal/mol (3360.8040 without restraints) Performing minimization step: 3397. Total energy = 3366.7093 kcal/mol (3360.7431 without restraints) Performing minimization step: 3398. Total energy = 3366.6387 kcal/mol (3360.6685 without restraints) Performing minimization step: 3399. Total energy = 3366.5718 kcal/mol (3360.6075 without restraints) Performing minimization step: 3400. Total energy = 3366.5011 kcal/mol (3360.5328 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e0aaf9ce/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 3401. Total energy = 3366.4340 kcal/mol (3360.4716 without restraints) Performing minimization step: 3402. Total energy = 3366.3636 kcal/mol (3360.3972 without restraints) Performing minimization step: 3403. Total energy = 3366.2968 kcal/mol (3360.3363 without restraints) Performing minimization step: 3404. Total energy = 3366.2265 kcal/mol (3360.2620 without restraints) Performing minimization step: 3405. Total energy = 3366.1598 kcal/mol (3360.2012 without restraints) Performing minimization step: 3406. Total energy = 3366.0898 kcal/mol (3360.1272 without restraints) Performing minimization step: 3407. Total energy = 3366.0235 kcal/mol (3360.0667 without restraints) Performing minimization step: 3408. Total energy = 3365.9534 kcal/mol (3359.9928 without restraints) Performing minimization step: 3409. Total energy = 3365.8871 kcal/mol (3359.9323 without restraints) Performing minimization step: 3410. Total energy = 3365.8169 kcal/mol (3359.8581 without restraints) Performing minimization step: 3411. Total energy = 3365.7508 kcal/mol (3359.7979 without restraints) Performing minimization step: 3412. Total energy = 3365.6809 kcal/mol (3359.7239 without restraints) Performing minimization step: 3413. Total energy = 3365.6147 kcal/mol (3359.6636 without restraints) Performing minimization step: 3414. Total energy = 3365.5448 kcal/mol (3359.5897 without restraints) Performing minimization step: 3415. Total energy = 3365.4787 kcal/mol (3359.5295 without restraints) Performing minimization step: 3416. Total energy = 3365.4087 kcal/mol (3359.4554 without restraints) Performing minimization step: 3417. Total energy = 3365.3424 kcal/mol (3359.3950 without restraints) Performing minimization step: 3418. Total energy = 3365.2727 kcal/mol (3359.3214 without restraints) Performing minimization step: 3419. Total energy = 3365.2068 kcal/mol (3359.2613 without restraints) Performing minimization step: 3420. Total energy = 3365.1372 kcal/mol (3359.1877 without restraints) Performing minimization step: 3421. Total energy = 3365.0713 kcal/mol (3359.1277 without restraints) Performing minimization step: 3422. Total energy = 3365.0020 kcal/mol (3359.0544 without restraints) Performing minimization step: 3423. Total energy = 3364.9362 kcal/mol (3358.9945 without restraints) Performing minimization step: 3424. Total energy = 3364.8668 kcal/mol (3358.9211 without restraints) Performing minimization step: 3425. Total energy = 3364.8012 kcal/mol (3358.8614 without restraints) Performing minimization step: 3426. Total energy = 3364.7319 kcal/mol (3358.7880 without restraints) Performing minimization step: 3427. Total energy = 3364.6663 kcal/mol (3358.7284 without restraints) Performing minimization step: 3428. Total energy = 3364.5971 kcal/mol (3358.6551 without restraints) Performing minimization step: 3429. Total energy = 3364.5314 kcal/mol (3358.5953 without restraints) Performing minimization step: 3430. Total energy = 3364.4623 kcal/mol (3358.5222 without restraints) Performing minimization step: 3431. Total energy = 3364.3970 kcal/mol (3358.4627 without restraints) Performing minimization step: 3432. Total energy = 3364.3280 kcal/mol (3358.3897 without restraints) Performing minimization step: 3433. Total energy = 3364.2627 kcal/mol (3358.3303 without restraints) Performing minimization step: 3434. Total energy = 3364.1937 kcal/mol (3358.2573 without restraints) Performing minimization step: 3435. Total energy = 3364.1285 kcal/mol (3358.1979 without restraints) Performing minimization step: 3436. Total energy = 3364.0596 kcal/mol (3358.1250 without restraints) Performing minimization step: 3437. Total energy = 3363.9942 kcal/mol (3358.0656 without restraints) Performing minimization step: 3438. Total energy = 3363.9254 kcal/mol (3357.9927 without restraints) Performing minimization step: 3439. Total energy = 3363.8600 kcal/mol (3357.9331 without restraints) Performing minimization step: 3440. Total energy = 3363.7916 kcal/mol (3357.8609 without restraints) Performing minimization step: 3441. Total energy = 3363.7268 kcal/mol (3357.8019 without restraints) Performing minimization step: 3442. Total energy = 3363.6580 kcal/mol (3357.7290 without restraints) Performing minimization step: 3443. Total energy = 3363.5929 kcal/mol (3357.6698 without restraints) Performing minimization step: 3444. Total energy = 3363.5242 kcal/mol (3357.5970 without restraints) Performing minimization step: 3445. Total energy = 3363.4591 kcal/mol (3357.5378 without restraints) Performing minimization step: 3446. Total energy = 3363.3907 kcal/mol (3357.4654 without restraints) Performing minimization step: 3447. Total energy = 3363.3263 kcal/mol (3357.4069 without restraints) Performing minimization step: 3448. Total energy = 3363.2580 kcal/mol (3357.3345 without restraints) Performing minimization step: 3449. Total energy = 3363.1936 kcal/mol (3357.2760 without restraints) Performing minimization step: 3450. Total energy = 3363.1254 kcal/mol (3357.2037 without restraints) Performing minimization step: 3451. Total energy = 3363.0606 kcal/mol (3357.1448 without restraints) Performing minimization step: 3452. Total energy = 3362.9926 kcal/mol (3357.0727 without restraints) Performing minimization step: 3453. Total energy = 3362.9281 kcal/mol (3357.0142 without restraints) Performing minimization step: 3454. Total energy = 3362.8601 kcal/mol (3356.9421 without restraints) Performing minimization step: 3455. Total energy = 3362.7960 kcal/mol (3356.8840 without restraints) Performing minimization step: 3456. Total energy = 3362.7281 kcal/mol (3356.8119 without restraints) Performing minimization step: 3457. Total energy = 3362.6637 kcal/mol (3356.7535 without restraints) Performing minimization step: 3458. Total energy = 3362.5960 kcal/mol (3356.6815 without restraints) Performing minimization step: 3459. Total energy = 3362.5320 kcal/mol (3356.6237 without restraints) Performing minimization step: 3460. Total energy = 3362.4644 kcal/mol (3356.5519 without restraints) Performing minimization step: 3461. Total energy = 3362.4002 kcal/mol (3356.4937 without restraints) Performing minimization step: 3462. Total energy = 3362.3329 kcal/mol (3356.4221 without restraints) Performing minimization step: 3463. Total energy = 3362.2687 kcal/mol (3356.3640 without restraints) Performing minimization step: 3464. Total energy = 3362.2009 kcal/mol (3356.2919 without restraints) Performing minimization step: 3465. Total energy = 3362.1369 kcal/mol (3356.2340 without restraints) Performing minimization step: 3466. Total energy = 3362.0693 kcal/mol (3356.1622 without restraints) Performing minimization step: 3467. Total energy = 3362.0049 kcal/mol (3356.1038 without restraints) Performing minimization step: 3468. Total energy = 3361.9377 kcal/mol (3356.0325 without restraints) Performing minimization step: 3469. Total energy = 3361.8738 kcal/mol (3355.9745 without restraints) Performing minimization step: 3470. Total energy = 3361.8064 kcal/mol (3355.9030 without restraints) Performing minimization step: 3471. Total energy = 3361.7427 kcal/mol (3355.8453 without restraints) Performing minimization step: 3472. Total energy = 3361.6754 kcal/mol (3355.7736 without restraints) Performing minimization step: 3473. Total energy = 3361.6115 kcal/mol (3355.7159 without restraints) Performing minimization step: 3474. Total energy = 3361.5449 kcal/mol (3355.6450 without restraints) Performing minimization step: 3475. Total energy = 3361.4812 kcal/mol (3355.5874 without restraints) Performing minimization step: 3476. Total energy = 3361.4142 kcal/mol (3355.5162 without restraints) Performing minimization step: 3477. Total energy = 3361.3507 kcal/mol (3355.4587 without restraints) Performing minimization step: 3478. Total energy = 3361.2837 kcal/mol (3355.3875 without restraints) Performing minimization step: 3479. Total energy = 3361.2200 kcal/mol (3355.3298 without restraints) Performing minimization step: 3480. Total energy = 3361.1532 kcal/mol (3355.2590 without restraints) Performing minimization step: 3481. Total energy = 3361.0897 kcal/mol (3355.2014 without restraints) Performing minimization step: 3482. Total energy = 3361.0233 kcal/mol (3355.1308 without restraints) Performing minimization step: 3483. Total energy = 3360.9601 kcal/mol (3355.0735 without restraints) Performing minimization step: 3484. Total energy = 3360.8935 kcal/mol (3355.0029 without restraints) Performing minimization step: 3485. Total energy = 3360.8301 kcal/mol (3354.9454 without restraints) Performing minimization step: 3486. Total energy = 3360.7635 kcal/mol (3354.8746 without restraints) Performing minimization step: 3487. Total energy = 3360.7000 kcal/mol (3354.8169 without restraints) Performing minimization step: 3488. Total energy = 3360.6336 kcal/mol (3354.7466 without restraints) Performing minimization step: 3489. Total energy = 3360.5705 kcal/mol (3354.6894 without restraints) Performing minimization step: 3490. Total energy = 3360.5040 kcal/mol (3354.6188 without restraints) Performing minimization step: 3491. Total energy = 3360.4410 kcal/mol (3354.5616 without restraints) Performing minimization step: 3492. Total energy = 3360.3746 kcal/mol (3354.4913 without restraints) Performing minimization step: 3493. Total energy = 3360.3117 kcal/mol (3354.4342 without restraints) Performing minimization step: 3494. Total energy = 3360.2456 kcal/mol (3354.3640 without restraints) Performing minimization step: 3495. Total energy = 3360.1825 kcal/mol (3354.3066 without restraints) Performing minimization step: 3496. Total energy = 3360.1165 kcal/mol (3354.2367 without restraints) Performing minimization step: 3497. Total energy = 3360.0539 kcal/mol (3354.1801 without restraints) Performing minimization step: 3498. Total energy = 3359.9879 kcal/mol (3354.1098 without restraints) Performing minimization step: 3499. Total energy = 3359.9249 kcal/mol (3354.0528 without restraints) Performing minimization step: 3500. Total energy = 3359.8585 kcal/mol (3353.9823 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e0aaf9ce/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 3501. Total energy = 3359.7959 kcal/mol (3353.9256 without restraints) Performing minimization step: 3502. Total energy = 3359.7301 kcal/mol (3353.8557 without restraints) Performing minimization step: 3503. Total energy = 3359.6676 kcal/mol (3353.7990 without restraints) Performing minimization step: 3504. Total energy = 3359.6018 kcal/mol (3353.7292 without restraints) Performing minimization step: 3505. Total energy = 3359.5393 kcal/mol (3353.6726 without restraints) Performing minimization step: 3506. Total energy = 3359.4737 kcal/mol (3353.6028 without restraints) Performing minimization step: 3507. Total energy = 3359.4116 kcal/mol (3353.5466 without restraints) Performing minimization step: 3508. Total energy = 3359.3460 kcal/mol (3353.4770 without restraints) Performing minimization step: 3509. Total energy = 3359.2837 kcal/mol (3353.4205 without restraints) Performing minimization step: 3510. Total energy = 3359.2182 kcal/mol (3353.3509 without restraints) Performing minimization step: 3511. Total energy = 3359.1560 kcal/mol (3353.2946 without restraints) Performing minimization step: 3512. Total energy = 3359.0908 kcal/mol (3353.2253 without restraints) Performing minimization step: 3513. Total energy = 3359.0284 kcal/mol (3353.1688 without restraints) Performing minimization step: 3514. Total energy = 3358.9630 kcal/mol (3353.0994 without restraints) Performing minimization step: 3515. Total energy = 3358.9011 kcal/mol (3353.0433 without restraints) Performing minimization step: 3516. Total energy = 3358.8360 kcal/mol (3352.9740 without restraints) Performing minimization step: 3517. Total energy = 3358.7738 kcal/mol (3352.9178 without restraints) Performing minimization step: 3518. Total energy = 3358.7087 kcal/mol (3352.8486 without restraints) Performing minimization step: 3519. Total energy = 3358.6470 kcal/mol (3352.7927 without restraints) Performing minimization step: 3520. Total energy = 3358.5821 kcal/mol (3352.7239 without restraints) Performing minimization step: 3521. Total energy = 3358.5205 kcal/mol (3352.6680 without restraints) Performing minimization step: 3522. Total energy = 3358.4558 kcal/mol (3352.5991 without restraints) Performing minimization step: 3523. Total energy = 3358.3943 kcal/mol (3352.5436 without restraints) Performing minimization step: 3524. Total energy = 3358.3293 kcal/mol (3352.4745 without restraints) Performing minimization step: 3525. Total energy = 3358.2678 kcal/mol (3352.4189 without restraints) Performing minimization step: 3526. Total energy = 3358.2030 kcal/mol (3352.3499 without restraints) Performing minimization step: 3527. Total energy = 3358.1414 kcal/mol (3352.2943 without restraints) Performing minimization step: 3528. Total energy = 3358.0770 kcal/mol (3352.2257 without restraints) Performing minimization step: 3529. Total energy = 3358.0155 kcal/mol (3352.1701 without restraints) Performing minimization step: 3530. Total energy = 3357.9506 kcal/mol (3352.1010 without restraints) Performing minimization step: 3531. Total energy = 3357.8889 kcal/mol (3352.0453 without restraints) Performing minimization step: 3532. Total energy = 3357.8243 kcal/mol (3351.9766 without restraints) Performing minimization step: 3533. Total energy = 3357.7632 kcal/mol (3351.9213 without restraints) Performing minimization step: 3534. Total energy = 3357.6986 kcal/mol (3351.8526 without restraints) Performing minimization step: 3535. Total energy = 3357.6371 kcal/mol (3351.7970 without restraints) Performing minimization step: 3536. Total energy = 3357.5733 kcal/mol (3351.7291 without restraints) Performing minimization step: 3537. Total energy = 3357.5122 kcal/mol (3351.6738 without restraints) Performing minimization step: 3538. Total energy = 3357.4480 kcal/mol (3351.6055 without restraints) Performing minimization step: 3539. Total energy = 3357.3867 kcal/mol (3351.5500 without restraints) Performing minimization step: 3540. Total energy = 3357.3220 kcal/mol (3351.4813 without restraints) Performing minimization step: 3541. Total energy = 3357.2611 kcal/mol (3351.4263 without restraints) Performing minimization step: 3542. Total energy = 3357.1972 kcal/mol (3351.3583 without restraints) Performing minimization step: 3543. Total energy = 3357.1363 kcal/mol (3351.3032 without restraints) Performing minimization step: 3544. Total energy = 3357.0722 kcal/mol (3351.2349 without restraints) Performing minimization step: 3545. Total energy = 3357.0115 kcal/mol (3351.1804 without restraints) Performing minimization step: 3546. Total energy = 3356.9474 kcal/mol (3351.1119 without restraints) Performing minimization step: 3547. Total energy = 3356.8866 kcal/mol (3351.0570 without restraints) Performing minimization step: 3548. Total energy = 3356.8227 kcal/mol (3350.9890 without restraints) Performing minimization step: 3549. Total energy = 3356.7620 kcal/mol (3350.9342 without restraints) Performing minimization step: 3550. Total energy = 3356.6982 kcal/mol (3350.8663 without restraints) Performing minimization step: 3551. Total energy = 3356.6373 kcal/mol (3350.8113 without restraints) Performing minimization step: 3552. Total energy = 3356.5735 kcal/mol (3350.7432 without restraints) Performing minimization step: 3553. Total energy = 3356.5129 kcal/mol (3350.6886 without restraints) Performing minimization step: 3554. Total energy = 3356.4489 kcal/mol (3350.6204 without restraints) Performing minimization step: 3555. Total energy = 3356.3884 kcal/mol (3350.5658 without restraints) Performing minimization step: 3556. Total energy = 3356.3245 kcal/mol (3350.4978 without restraints) Performing minimization step: 3557. Total energy = 3356.2637 kcal/mol (3350.4428 without restraints) Performing minimization step: 3558. Total energy = 3356.2001 kcal/mol (3350.3751 without restraints) Performing minimization step: 3559. Total energy = 3356.1397 kcal/mol (3350.3206 without restraints) Performing minimization step: 3560. Total energy = 3356.0761 kcal/mol (3350.2529 without restraints) Performing minimization step: 3561. Total energy = 3356.0155 kcal/mol (3350.1981 without restraints) Performing minimization step: 3562. Total energy = 3355.9523 kcal/mol (3350.1309 without restraints) Performing minimization step: 3563. Total energy = 3355.8922 kcal/mol (3350.0766 without restraints) Performing minimization step: 3564. Total energy = 3355.8288 kcal/mol (3350.0090 without restraints) Performing minimization step: 3565. Total energy = 3355.7690 kcal/mol (3349.9551 without restraints) Performing minimization step: 3566. Total energy = 3355.7056 kcal/mol (3349.8875 without restraints) Performing minimization step: 3567. Total energy = 3355.6456 kcal/mol (3349.8333 without restraints) Performing minimization step: 3568. Total energy = 3355.5820 kcal/mol (3349.7657 without restraints) Performing minimization step: 3569. Total energy = 3355.5218 kcal/mol (3349.7118 without restraints) Performing minimization step: 3570. Total energy = 3355.4590 kcal/mol (3349.6444 without restraints) Performing minimization step: 3571. Total energy = 3355.3990 kcal/mol (3349.5903 without restraints) Performing minimization step: 3572. Total energy = 3355.3357 kcal/mol (3349.5228 without restraints) Performing minimization step: 3573. Total energy = 3355.2758 kcal/mol (3349.4689 without restraints) Performing minimization step: 3574. Total energy = 3355.2126 kcal/mol (3349.4015 without restraints) Performing minimization step: 3575. Total energy = 3355.1527 kcal/mol (3349.3474 without restraints) Performing minimization step: 3576. Total energy = 3355.0895 kcal/mol (3349.2801 without restraints) Performing minimization step: 3577. Total energy = 3355.0296 kcal/mol (3349.2260 without restraints) Performing minimization step: 3578. Total energy = 3354.9666 kcal/mol (3349.1589 without restraints) Performing minimization step: 3579. Total energy = 3354.9069 kcal/mol (3349.1050 without restraints) Performing minimization step: 3580. Total energy = 3354.8440 kcal/mol (3349.0380 without restraints) Performing minimization step: 3581. Total energy = 3354.7849 kcal/mol (3348.9848 without restraints) Performing minimization step: 3582. Total energy = 3354.7215 kcal/mol (3348.9172 without restraints) Performing minimization step: 3583. Total energy = 3354.6620 kcal/mol (3348.8636 without restraints) Performing minimization step: 3584. Total energy = 3354.5994 kcal/mol (3348.7968 without restraints) Performing minimization step: 3585. Total energy = 3354.5399 kcal/mol (3348.7431 without restraints) Performing minimization step: 3586. Total energy = 3354.4774 kcal/mol (3348.6765 without restraints) Performing minimization step: 3587. Total energy = 3354.4178 kcal/mol (3348.6228 without restraints) Performing minimization step: 3588. Total energy = 3354.3550 kcal/mol (3348.5557 without restraints) Performing minimization step: 3589. Total energy = 3354.2955 kcal/mol (3348.5023 without restraints) Performing minimization step: 3590. Total energy = 3354.2329 kcal/mol (3348.4355 without restraints) Performing minimization step: 3591. Total energy = 3354.1737 kcal/mol (3348.3822 without restraints) Performing minimization step: 3592. Total energy = 3354.1113 kcal/mol (3348.3156 without restraints) Performing minimization step: 3593. Total energy = 3354.0522 kcal/mol (3348.2625 without restraints) Performing minimization step: 3594. Total energy = 3353.9900 kcal/mol (3348.1960 without restraints) Performing minimization step: 3595. Total energy = 3353.9307 kcal/mol (3348.1426 without restraints) Performing minimization step: 3596. Total energy = 3353.8680 kcal/mol (3348.0757 without restraints) Performing minimization step: 3597. Total energy = 3353.8088 kcal/mol (3348.0224 without restraints) Performing minimization step: 3598. Total energy = 3353.7465 kcal/mol (3347.9559 without restraints) Performing minimization step: 3599. Total energy = 3353.6873 kcal/mol (3347.9027 without restraints) Performing minimization step: 3600. Total energy = 3353.6250 kcal/mol (3347.8361 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e0aaf9ce/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 3601. Total energy = 3353.5659 kcal/mol (3347.7829 without restraints) Performing minimization step: 3602. Total energy = 3353.5039 kcal/mol (3347.7167 without restraints) Performing minimization step: 3603. Total energy = 3353.4443 kcal/mol (3347.6630 without restraints) Performing minimization step: 3604. Total energy = 3353.3820 kcal/mol (3347.5966 without restraints) Performing minimization step: 3605. Total energy = 3353.3232 kcal/mol (3347.5436 without restraints) Performing minimization step: 3606. Total energy = 3353.2613 kcal/mol (3347.4776 without restraints) Performing minimization step: 3607. Total energy = 3353.2027 kcal/mol (3347.4248 without restraints) Performing minimization step: 3608. Total energy = 3353.1408 kcal/mol (3347.3587 without restraints) Performing minimization step: 3609. Total energy = 3353.0823 kcal/mol (3347.3062 without restraints) Performing minimization step: 3610. Total energy = 3353.0203 kcal/mol (3347.2400 without restraints) Performing minimization step: 3611. Total energy = 3352.9618 kcal/mol (3347.1873 without restraints) Performing minimization step: 3612. Total energy = 3352.8999 kcal/mol (3347.1212 without restraints) Performing minimization step: 3613. Total energy = 3352.8415 kcal/mol (3347.0687 without restraints) Performing minimization step: 3614. Total energy = 3352.7799 kcal/mol (3347.0029 without restraints) Performing minimization step: 3615. Total energy = 3352.7215 kcal/mol (3346.9504 without restraints) Performing minimization step: 3616. Total energy = 3352.6599 kcal/mol (3346.8847 without restraints) Performing minimization step: 3617. Total energy = 3352.6016 kcal/mol (3346.8321 without restraints) Performing minimization step: 3618. Total energy = 3352.5400 kcal/mol (3346.7663 without restraints) Performing minimization step: 3619. Total energy = 3352.4817 kcal/mol (3346.7139 without restraints) Performing minimization step: 3620. Total energy = 3352.4202 kcal/mol (3346.6483 without restraints) Performing minimization step: 3621. Total energy = 3352.3616 kcal/mol (3346.5958 without restraints) Performing minimization step: 3622. Total energy = 3352.3004 kcal/mol (3346.5302 without restraints) Performing minimization step: 3623. Total energy = 3352.2419 kcal/mol (3346.4779 without restraints) Performing minimization step: 3624. Total energy = 3352.1809 kcal/mol (3346.4123 without restraints) Performing minimization step: 3625. Total energy = 3352.1225 kcal/mol (3346.3602 without restraints) Performing minimization step: 3626. Total energy = 3352.0614 kcal/mol (3346.2945 without restraints) Performing minimization step: 3627. Total energy = 3352.0032 kcal/mol (3346.2426 without restraints) Performing minimization step: 3628. Total energy = 3351.9424 kcal/mol (3346.1772 without restraints) Performing minimization step: 3629. Total energy = 3351.8841 kcal/mol (3346.1252 without restraints) Performing minimization step: 3630. Total energy = 3351.8232 kcal/mol (3346.0597 without restraints) Performing minimization step: 3631. Total energy = 3351.7652 kcal/mol (3346.0080 without restraints) Performing minimization step: 3632. Total energy = 3351.7045 kcal/mol (3345.9426 without restraints) Performing minimization step: 3633. Total energy = 3351.6464 kcal/mol (3345.8908 without restraints) Performing minimization step: 3634. Total energy = 3351.5855 kcal/mol (3345.8252 without restraints) Performing minimization step: 3635. Total energy = 3351.5273 kcal/mol (3345.7734 without restraints) Performing minimization step: 3636. Total energy = 3351.4666 kcal/mol (3345.7081 without restraints) Performing minimization step: 3637. Total energy = 3351.4083 kcal/mol (3345.6561 without restraints) Performing minimization step: 3638. Total energy = 3351.3479 kcal/mol (3345.5911 without restraints) Performing minimization step: 3639. Total energy = 3351.2897 kcal/mol (3345.5392 without restraints) Performing minimization step: 3640. Total energy = 3351.2294 kcal/mol (3345.4742 without restraints) Performing minimization step: 3641. Total energy = 3351.1713 kcal/mol (3345.4224 without restraints) Performing minimization step: 3642. Total energy = 3351.1108 kcal/mol (3345.3573 without restraints) Performing minimization step: 3643. Total energy = 3351.0528 kcal/mol (3345.3055 without restraints) Performing minimization step: 3644. Total energy = 3350.9925 kcal/mol (3345.2407 without restraints) Performing minimization step: 3645. Total energy = 3350.9348 kcal/mol (3345.1892 without restraints) Performing minimization step: 3646. Total energy = 3350.8746 kcal/mol (3345.1245 without restraints) Performing minimization step: 3647. Total energy = 3350.8169 kcal/mol (3345.0729 without restraints) Performing minimization step: 3648. Total energy = 3350.7572 kcal/mol (3345.0087 without restraints) Performing minimization step: 3649. Total energy = 3350.6995 kcal/mol (3344.9572 without restraints) Performing minimization step: 3650. Total energy = 3350.6394 kcal/mol (3344.8926 without restraints) Performing minimization step: 3651. Total energy = 3350.5819 kcal/mol (3344.8414 without restraints) Performing minimization step: 3652. Total energy = 3350.5221 kcal/mol (3344.7770 without restraints) Performing minimization step: 3653. Total energy = 3350.4650 kcal/mol (3344.7261 without restraints) Performing minimization step: 3654. Total energy = 3350.4051 kcal/mol (3344.6614 without restraints) Performing minimization step: 3655. Total energy = 3350.3475 kcal/mol (3344.6103 without restraints) Performing minimization step: 3656. Total energy = 3350.2875 kcal/mol (3344.5456 without restraints) Performing minimization step: 3657. Total energy = 3350.2297 kcal/mol (3344.4942 without restraints) Performing minimization step: 3658. Total energy = 3350.1702 kcal/mol (3344.4299 without restraints) Performing minimization step: 3659. Total energy = 3350.1128 kcal/mol (3344.3790 without restraints) Performing minimization step: 3660. Total energy = 3350.0532 kcal/mol (3344.3146 without restraints) Performing minimization step: 3661. Total energy = 3349.9959 kcal/mol (3344.2636 without restraints) Performing minimization step: 3662. Total energy = 3349.9363 kcal/mol (3344.1994 without restraints) Performing minimization step: 3663. Total energy = 3349.8792 kcal/mol (3344.1486 without restraints) Performing minimization step: 3664. Total energy = 3349.8197 kcal/mol (3344.0844 without restraints) Performing minimization step: 3665. Total energy = 3349.7626 kcal/mol (3344.0336 without restraints) Performing minimization step: 3666. Total energy = 3349.7032 kcal/mol (3343.9695 without restraints) Performing minimization step: 3667. Total energy = 3349.6461 kcal/mol (3343.9189 without restraints) Performing minimization step: 3668. Total energy = 3349.5868 kcal/mol (3343.8548 without restraints) Performing minimization step: 3669. Total energy = 3349.5299 kcal/mol (3343.8044 without restraints) Performing minimization step: 3670. Total energy = 3349.4705 kcal/mol (3343.7402 without restraints) Performing minimization step: 3671. Total energy = 3349.4137 kcal/mol (3343.6898 without restraints) Performing minimization step: 3672. Total energy = 3349.3545 kcal/mol (3343.6258 without restraints) Performing minimization step: 3673. Total energy = 3349.2977 kcal/mol (3343.5754 without restraints) Performing minimization step: 3674. Total energy = 3349.2386 kcal/mol (3343.5115 without restraints) Performing minimization step: 3675. Total energy = 3349.1817 kcal/mol (3343.4610 without restraints) Performing minimization step: 3676. Total energy = 3349.1225 kcal/mol (3343.3970 without restraints) Performing minimization step: 3677. Total energy = 3349.0656 kcal/mol (3343.3466 without restraints) Performing minimization step: 3678. Total energy = 3349.0066 kcal/mol (3343.2828 without restraints) Performing minimization step: 3679. Total energy = 3348.9499 kcal/mol (3343.2325 without restraints) Performing minimization step: 3680. Total energy = 3348.8912 kcal/mol (3343.1690 without restraints) Performing minimization step: 3681. Total energy = 3348.8343 kcal/mol (3343.1185 without restraints) Performing minimization step: 3682. Total energy = 3348.7754 kcal/mol (3343.0549 without restraints) Performing minimization step: 3683. Total energy = 3348.7188 kcal/mol (3343.0047 without restraints) Performing minimization step: 3684. Total energy = 3348.6600 kcal/mol (3342.9411 without restraints) Performing minimization step: 3685. Total energy = 3348.6034 kcal/mol (3342.8909 without restraints) Performing minimization step: 3686. Total energy = 3348.5446 kcal/mol (3342.8276 without restraints) Performing minimization step: 3687. Total energy = 3348.4880 kcal/mol (3342.7772 without restraints) Performing minimization step: 3688. Total energy = 3348.4294 kcal/mol (3342.7138 without restraints) Performing minimization step: 3689. Total energy = 3348.3729 kcal/mol (3342.6637 without restraints) Performing minimization step: 3690. Total energy = 3348.3144 kcal/mol (3342.6004 without restraints) Performing minimization step: 3691. Total energy = 3348.2582 kcal/mol (3342.5506 without restraints) Performing minimization step: 3692. Total energy = 3348.1997 kcal/mol (3342.4873 without restraints) Performing minimization step: 3693. Total energy = 3348.1434 kcal/mol (3342.4374 without restraints) Performing minimization step: 3694. Total energy = 3348.0850 kcal/mol (3342.3742 without restraints) Performing minimization step: 3695. Total energy = 3348.0287 kcal/mol (3342.3244 without restraints) Performing minimization step: 3696. Total energy = 3347.9705 kcal/mol (3342.2613 without restraints) Performing minimization step: 3697. Total energy = 3347.9143 kcal/mol (3342.2115 without restraints) Performing minimization step: 3698. Total energy = 3347.8561 kcal/mol (3342.1486 without restraints) Performing minimization step: 3699. Total energy = 3347.7998 kcal/mol (3342.0986 without restraints) Performing minimization step: 3700. Total energy = 3347.7414 kcal/mol (3342.0354 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e0aaf9ce/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 3701. Total energy = 3347.6848 kcal/mol (3341.9853 without restraints) Performing minimization step: 3702. Total energy = 3347.6266 kcal/mol (3341.9223 without restraints) Performing minimization step: 3703. Total energy = 3347.5705 kcal/mol (3341.8727 without restraints) Performing minimization step: 3704. Total energy = 3347.5124 kcal/mol (3341.8103 without restraints) Performing minimization step: 3705. Total energy = 3347.4568 kcal/mol (3341.7605 without restraints) Performing minimization step: 3706. Total energy = 3347.3987 kcal/mol (3341.6977 without restraints) Performing minimization step: 3707. Total energy = 3347.3430 kcal/mol (3341.6483 without restraints) Performing minimization step: 3708. Total energy = 3347.2850 kcal/mol (3341.5857 without restraints) Performing minimization step: 3709. Total energy = 3347.2291 kcal/mol (3341.5361 without restraints) Performing minimization step: 3710. Total energy = 3347.1714 kcal/mol (3341.4735 without restraints) Performing minimization step: 3711. Total energy = 3347.1155 kcal/mol (3341.4240 without restraints) Performing minimization step: 3712. Total energy = 3347.0571 kcal/mol (3341.3613 without restraints) Performing minimization step: 3713. Total energy = 3347.0018 kcal/mol (3341.3120 without restraints) Performing minimization step: 3714. Total energy = 3346.9439 kcal/mol (3341.2493 without restraints) Performing minimization step: 3715. Total energy = 3346.8883 kcal/mol (3341.2001 without restraints) Performing minimization step: 3716. Total energy = 3346.8302 kcal/mol (3341.1376 without restraints) Performing minimization step: 3717. Total energy = 3346.7750 kcal/mol (3341.0884 without restraints) Performing minimization step: 3718. Total energy = 3346.7169 kcal/mol (3341.0259 without restraints) Performing minimization step: 3719. Total energy = 3346.6621 kcal/mol (3340.9770 without restraints) Performing minimization step: 3720. Total energy = 3346.6039 kcal/mol (3340.9145 without restraints) Performing minimization step: 3721. Total energy = 3346.5488 kcal/mol (3340.8654 without restraints) Performing minimization step: 3722. Total energy = 3346.4908 kcal/mol (3340.8029 without restraints) Performing minimization step: 3723. Total energy = 3346.4357 kcal/mol (3340.7540 without restraints) Performing minimization step: 3724. Total energy = 3346.3777 kcal/mol (3340.6915 without restraints) Performing minimization step: 3725. Total energy = 3346.3227 kcal/mol (3340.6425 without restraints) Performing minimization step: 3726. Total energy = 3346.2648 kcal/mol (3340.5802 without restraints) Performing minimization step: 3727. Total energy = 3346.2096 kcal/mol (3340.5311 without restraints) Performing minimization step: 3728. Total energy = 3346.1520 kcal/mol (3340.4692 without restraints) Performing minimization step: 3729. Total energy = 3346.0974 kcal/mol (3340.4204 without restraints) Performing minimization step: 3730. Total energy = 3346.0398 kcal/mol (3340.3583 without restraints) Performing minimization step: 3731. Total energy = 3345.9849 kcal/mol (3340.3095 without restraints) Performing minimization step: 3732. Total energy = 3345.9274 kcal/mol (3340.2477 without restraints) Performing minimization step: 3733. Total energy = 3345.8725 kcal/mol (3340.1988 without restraints) Performing minimization step: 3734. Total energy = 3345.8150 kcal/mol (3340.1368 without restraints) Performing minimization step: 3735. Total energy = 3345.7601 kcal/mol (3340.0879 without restraints) Performing minimization step: 3736. Total energy = 3345.7025 kcal/mol (3340.0259 without restraints) Performing minimization step: 3737. Total energy = 3345.6479 kcal/mol (3339.9773 without restraints) Performing minimization step: 3738. Total energy = 3345.5905 kcal/mol (3339.9154 without restraints) Performing minimization step: 3739. Total energy = 3345.5360 kcal/mol (3339.8670 without restraints) Performing minimization step: 3740. Total energy = 3345.4787 kcal/mol (3339.8053 without restraints) Performing minimization step: 3741. Total energy = 3345.4243 kcal/mol (3339.7568 without restraints) Performing minimization step: 3742. Total energy = 3345.3670 kcal/mol (3339.6952 without restraints) Performing minimization step: 3743. Total energy = 3345.3127 kcal/mol (3339.6469 without restraints) Performing minimization step: 3744. Total energy = 3345.2554 kcal/mol (3339.5851 without restraints) Performing minimization step: 3745. Total energy = 3345.2014 kcal/mol (3339.5372 without restraints) Performing minimization step: 3746. Total energy = 3345.1442 kcal/mol (3339.4755 without restraints) Performing minimization step: 3747. Total energy = 3345.0899 kcal/mol (3339.4272 without restraints) Performing minimization step: 3748. Total energy = 3345.0327 kcal/mol (3339.3656 without restraints) Performing minimization step: 3749. Total energy = 3344.9787 kcal/mol (3339.3176 without restraints) Performing minimization step: 3750. Total energy = 3344.9216 kcal/mol (3339.2561 without restraints) Performing minimization step: 3751. Total energy = 3344.8672 kcal/mol (3339.2077 without restraints) Performing minimization step: 3752. Total energy = 3344.8101 kcal/mol (3339.1462 without restraints) Performing minimization step: 3753. Total energy = 3344.7562 kcal/mol (3339.0983 without restraints) Performing minimization step: 3754. Total energy = 3344.6991 kcal/mol (3339.0367 without restraints) Performing minimization step: 3755. Total energy = 3344.6451 kcal/mol (3338.9887 without restraints) Performing minimization step: 3756. Total energy = 3344.5881 kcal/mol (3338.9273 without restraints) Performing minimization step: 3757. Total energy = 3344.5341 kcal/mol (3338.8793 without restraints) Performing minimization step: 3758. Total energy = 3344.4772 kcal/mol (3338.8180 without restraints) Performing minimization step: 3759. Total energy = 3344.4233 kcal/mol (3338.7701 without restraints) Performing minimization step: 3760. Total energy = 3344.3664 kcal/mol (3338.7087 without restraints) Performing minimization step: 3761. Total energy = 3344.3125 kcal/mol (3338.6608 without restraints) Performing minimization step: 3762. Total energy = 3344.2556 kcal/mol (3338.5994 without restraints) Performing minimization step: 3763. Total energy = 3344.2021 kcal/mol (3338.5522 without restraints) Performing minimization step: 3764. Total energy = 3344.1453 kcal/mol (3338.4909 without restraints) Performing minimization step: 3765. Total energy = 3344.0916 kcal/mol (3338.4431 without restraints) Performing minimization step: 3766. Total energy = 3344.0348 kcal/mol (3338.3817 without restraints) Performing minimization step: 3767. Total energy = 3343.9810 kcal/mol (3338.3341 without restraints) Performing minimization step: 3768. Total energy = 3343.9241 kcal/mol (3338.2727 without restraints) Performing minimization step: 3769. Total energy = 3343.8703 kcal/mol (3338.2249 without restraints) Performing minimization step: 3770. Total energy = 3343.8138 kcal/mol (3338.1641 without restraints) Performing minimization step: 3771. Total energy = 3343.7606 kcal/mol (3338.1168 without restraints) Performing minimization step: 3772. Total energy = 3343.7040 kcal/mol (3338.0557 without restraints) Performing minimization step: 3773. Total energy = 3343.6505 kcal/mol (3338.0082 without restraints) Performing minimization step: 3774. Total energy = 3343.5940 kcal/mol (3337.9474 without restraints) Performing minimization step: 3775. Total energy = 3343.5404 kcal/mol (3337.8998 without restraints) Performing minimization step: 3776. Total energy = 3343.4840 kcal/mol (3337.8389 without restraints) Performing minimization step: 3777. Total energy = 3343.4305 kcal/mol (3337.7914 without restraints) Performing minimization step: 3778. Total energy = 3343.3742 kcal/mol (3337.7307 without restraints) Performing minimization step: 3779. Total energy = 3343.3218 kcal/mol (3337.6843 without restraints) Performing minimization step: 3780. Total energy = 3343.2655 kcal/mol (3337.6235 without restraints) Performing minimization step: 3781. Total energy = 3343.2122 kcal/mol (3337.5762 without restraints) Performing minimization step: 3782. Total energy = 3343.1559 kcal/mol (3337.5155 without restraints) Performing minimization step: 3783. Total energy = 3343.1029 kcal/mol (3337.4684 without restraints) Performing minimization step: 3784. Total energy = 3343.0467 kcal/mol (3337.4078 without restraints) Performing minimization step: 3785. Total energy = 3342.9938 kcal/mol (3337.3609 without restraints) Performing minimization step: 3786. Total energy = 3342.9378 kcal/mol (3337.3006 without restraints) Performing minimization step: 3787. Total energy = 3342.8850 kcal/mol (3337.2537 without restraints) Performing minimization step: 3788. Total energy = 3342.8289 kcal/mol (3337.1931 without restraints) Performing minimization step: 3789. Total energy = 3342.7758 kcal/mol (3337.1459 without restraints) Performing minimization step: 3790. Total energy = 3342.7196 kcal/mol (3337.0852 without restraints) Performing minimization step: 3791. Total energy = 3342.6662 kcal/mol (3337.0380 without restraints) Performing minimization step: 3792. Total energy = 3342.6096 kcal/mol (3336.9766 without restraints) Performing minimization step: 3793. Total energy = 3342.5562 kcal/mol (3336.9294 without restraints) Performing minimization step: 3794. Total energy = 3342.5001 kcal/mol (3336.8688 without restraints) Performing minimization step: 3795. Total energy = 3342.4471 kcal/mol (3336.8219 without restraints) Performing minimization step: 3796. Total energy = 3342.3913 kcal/mol (3336.7617 without restraints) Performing minimization step: 3797. Total energy = 3342.3380 kcal/mol (3336.7144 without restraints) Performing minimization step: 3798. Total energy = 3342.2823 kcal/mol (3336.6542 without restraints) Performing minimization step: 3799. Total energy = 3342.2294 kcal/mol (3336.6074 without restraints) Performing minimization step: 3800. Total energy = 3342.1741 kcal/mol (3336.5476 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e0aaf9ce/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 3801. Total energy = 3342.1211 kcal/mol (3336.5006 without restraints) Performing minimization step: 3802. Total energy = 3342.0653 kcal/mol (3336.4403 without restraints) Performing minimization step: 3803. Total energy = 3342.0126 kcal/mol (3336.3936 without restraints) Performing minimization step: 3804. Total energy = 3341.9570 kcal/mol (3336.3335 without restraints) Performing minimization step: 3805. Total energy = 3341.9043 kcal/mol (3336.2869 without restraints) Performing minimization step: 3806. Total energy = 3341.8485 kcal/mol (3336.2266 without restraints) Performing minimization step: 3807. Total energy = 3341.7955 kcal/mol (3336.1795 without restraints) Performing minimization step: 3808. Total energy = 3341.7399 kcal/mol (3336.1195 without restraints) Performing minimization step: 3809. Total energy = 3341.6873 kcal/mol (3336.0730 without restraints) Performing minimization step: 3810. Total energy = 3341.6318 kcal/mol (3336.0128 without restraints) Performing minimization step: 3811. Total energy = 3341.5792 kcal/mol (3335.9664 without restraints) Performing minimization step: 3812. Total energy = 3341.5238 kcal/mol (3335.9065 without restraints) Performing minimization step: 3813. Total energy = 3341.4714 kcal/mol (3335.8601 without restraints) Performing minimization step: 3814. Total energy = 3341.4161 kcal/mol (3335.8003 without restraints) Performing minimization step: 3815. Total energy = 3341.3637 kcal/mol (3335.7538 without restraints) Performing minimization step: 3816. Total energy = 3341.3085 kcal/mol (3335.6942 without restraints) Performing minimization step: 3817. Total energy = 3341.2562 kcal/mol (3335.6480 without restraints) Performing minimization step: 3818. Total energy = 3341.2007 kcal/mol (3335.5879 without restraints) Performing minimization step: 3819. Total energy = 3341.1484 kcal/mol (3335.5416 without restraints) Performing minimization step: 3820. Total energy = 3341.0934 kcal/mol (3335.4822 without restraints) Performing minimization step: 3821. Total energy = 3341.0409 kcal/mol (3335.4357 without restraints) Performing minimization step: 3822. Total energy = 3340.9858 kcal/mol (3335.3761 without restraints) Performing minimization step: 3823. Total energy = 3340.9338 kcal/mol (3335.3301 without restraints) Performing minimization step: 3824. Total energy = 3340.8787 kcal/mol (3335.2705 without restraints) Performing minimization step: 3825. Total energy = 3340.8265 kcal/mol (3335.2244 without restraints) Performing minimization step: 3826. Total energy = 3340.7715 kcal/mol (3335.1649 without restraints) Performing minimization step: 3827. Total energy = 3340.7194 kcal/mol (3335.1186 without restraints) Performing minimization step: 3828. Total energy = 3340.6642 kcal/mol (3335.0590 without restraints) Performing minimization step: 3829. Total energy = 3340.6123 kcal/mol (3335.0132 without restraints) Performing minimization step: 3830. Total energy = 3340.5573 kcal/mol (3334.9536 without restraints) Performing minimization step: 3831. Total energy = 3340.5053 kcal/mol (3334.9077 without restraints) Performing minimization step: 3832. Total energy = 3340.4502 kcal/mol (3334.8481 without restraints) Performing minimization step: 3833. Total energy = 3340.3981 kcal/mol (3334.8020 without restraints) Performing minimization step: 3834. Total energy = 3340.3437 kcal/mol (3334.7432 without restraints) Performing minimization step: 3835. Total energy = 3340.2919 kcal/mol (3334.6973 without restraints) Performing minimization step: 3836. Total energy = 3340.2372 kcal/mol (3334.6381 without restraints) Performing minimization step: 3837. Total energy = 3340.1860 kcal/mol (3334.5929 without restraints) Performing minimization step: 3838. Total energy = 3340.1315 kcal/mol (3334.5339 without restraints) Performing minimization step: 3839. Total energy = 3340.0800 kcal/mol (3334.4885 without restraints) Performing minimization step: 3840. Total energy = 3340.0253 kcal/mol (3334.4293 without restraints) Performing minimization step: 3841. Total energy = 3339.9737 kcal/mol (3334.3837 without restraints) Performing minimization step: 3842. Total energy = 3339.9190 kcal/mol (3334.3244 without restraints) Performing minimization step: 3843. Total energy = 3339.8673 kcal/mol (3334.2788 without restraints) Performing minimization step: 3844. Total energy = 3339.8128 kcal/mol (3334.2198 without restraints) Performing minimization step: 3845. Total energy = 3339.7612 kcal/mol (3334.1742 without restraints) Performing minimization step: 3846. Total energy = 3339.7068 kcal/mol (3334.1153 without restraints) Performing minimization step: 3847. Total energy = 3339.6553 kcal/mol (3334.0698 without restraints) Performing minimization step: 3848. Total energy = 3339.6009 kcal/mol (3334.0109 without restraints) Performing minimization step: 3849. Total energy = 3339.5493 kcal/mol (3333.9652 without restraints) Performing minimization step: 3850. Total energy = 3339.4948 kcal/mol (3333.9063 without restraints) Performing minimization step: 3851. Total energy = 3339.4435 kcal/mol (3333.8610 without restraints) Performing minimization step: 3852. Total energy = 3339.3891 kcal/mol (3333.8022 without restraints) Performing minimization step: 3853. Total energy = 3339.3378 kcal/mol (3333.7568 without restraints) Performing minimization step: 3854. Total energy = 3339.2837 kcal/mol (3333.6982 without restraints) Performing minimization step: 3855. Total energy = 3339.2325 kcal/mol (3333.6530 without restraints) Performing minimization step: 3856. Total energy = 3339.1780 kcal/mol (3333.5940 without restraints) Performing minimization step: 3857. Total energy = 3339.1267 kcal/mol (3333.5488 without restraints) Performing minimization step: 3858. Total energy = 3339.0729 kcal/mol (3333.4904 without restraints) Performing minimization step: 3859. Total energy = 3339.0215 kcal/mol (3333.4450 without restraints) Performing minimization step: 3860. Total energy = 3338.9673 kcal/mol (3333.3862 without restraints) Performing minimization step: 3861. Total energy = 3338.9157 kcal/mol (3333.3407 without restraints) Performing minimization step: 3862. Total energy = 3338.8617 kcal/mol (3333.2822 without restraints) Performing minimization step: 3863. Total energy = 3338.8106 kcal/mol (3333.2371 without restraints) Performing minimization step: 3864. Total energy = 3338.7568 kcal/mol (3333.1787 without restraints) Performing minimization step: 3865. Total energy = 3338.7058 kcal/mol (3333.1337 without restraints) Performing minimization step: 3866. Total energy = 3338.6518 kcal/mol (3333.0753 without restraints) Performing minimization step: 3867. Total energy = 3338.6009 kcal/mol (3333.0304 without restraints) Performing minimization step: 3868. Total energy = 3338.5473 kcal/mol (3332.9722 without restraints) Performing minimization step: 3869. Total energy = 3338.4962 kcal/mol (3332.9271 without restraints) Performing minimization step: 3870. Total energy = 3338.4423 kcal/mol (3332.8687 without restraints) Performing minimization step: 3871. Total energy = 3338.3919 kcal/mol (3332.8243 without restraints) Performing minimization step: 3872. Total energy = 3338.3382 kcal/mol (3332.7662 without restraints) Performing minimization step: 3873. Total energy = 3338.2875 kcal/mol (3332.7214 without restraints) Performing minimization step: 3874. Total energy = 3338.2338 kcal/mol (3332.6632 without restraints) Performing minimization step: 3875. Total energy = 3338.1830 kcal/mol (3332.6184 without restraints) Performing minimization step: 3876. Total energy = 3338.1293 kcal/mol (3332.5602 without restraints) Performing minimization step: 3877. Total energy = 3338.0787 kcal/mol (3332.5156 without restraints) Performing minimization step: 3878. Total energy = 3338.0251 kcal/mol (3332.4575 without restraints) Performing minimization step: 3879. Total energy = 3337.9743 kcal/mol (3332.4126 without restraints) Performing minimization step: 3880. Total energy = 3337.9206 kcal/mol (3332.3545 without restraints) Performing minimization step: 3881. Total energy = 3337.8700 kcal/mol (3332.3099 without restraints) Performing minimization step: 3882. Total energy = 3337.8165 kcal/mol (3332.2518 without restraints) Performing minimization step: 3883. Total energy = 3337.7659 kcal/mol (3332.2073 without restraints) Performing minimization step: 3884. Total energy = 3337.7124 kcal/mol (3332.1492 without restraints) Performing minimization step: 3885. Total energy = 3337.6621 kcal/mol (3332.1049 without restraints) Performing minimization step: 3886. Total energy = 3337.6089 kcal/mol (3332.0473 without restraints) Performing minimization step: 3887. Total energy = 3337.5586 kcal/mol (3332.0029 without restraints) Performing minimization step: 3888. Total energy = 3337.5057 kcal/mol (3331.9454 without restraints) Performing minimization step: 3889. Total energy = 3337.4552 kcal/mol (3331.9010 without restraints) Performing minimization step: 3890. Total energy = 3337.4020 kcal/mol (3331.8433 without restraints) Performing minimization step: 3891. Total energy = 3337.3519 kcal/mol (3331.7993 without restraints) Performing minimization step: 3892. Total energy = 3337.2983 kcal/mol (3331.7410 without restraints) Performing minimization step: 3893. Total energy = 3337.2481 kcal/mol (3331.6969 without restraints) Performing minimization step: 3894. Total energy = 3337.1951 kcal/mol (3331.6394 without restraints) Performing minimization step: 3895. Total energy = 3337.1449 kcal/mol (3331.5951 without restraints) Performing minimization step: 3896. Total energy = 3337.0917 kcal/mol (3331.5374 without restraints) Performing minimization step: 3897. Total energy = 3337.0414 kcal/mol (3331.4930 without restraints) Performing minimization step: 3898. Total energy = 3336.9883 kcal/mol (3331.4354 without restraints) Performing minimization step: 3899. Total energy = 3336.9381 kcal/mol (3331.3912 without restraints) Performing minimization step: 3900. Total energy = 3336.8850 kcal/mol (3331.3336 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e0aaf9ce/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 3901. Total energy = 3336.8352 kcal/mol (3331.2897 without restraints) Performing minimization step: 3902. Total energy = 3336.7821 kcal/mol (3331.2320 without restraints) Performing minimization step: 3903. Total energy = 3336.7323 kcal/mol (3331.1885 without restraints) Performing minimization step: 3904. Total energy = 3336.6795 kcal/mol (3331.1310 without restraints) Performing minimization step: 3905. Total energy = 3336.6295 kcal/mol (3331.0870 without restraints) Performing minimization step: 3906. Total energy = 3336.5768 kcal/mol (3331.0297 without restraints) Performing minimization step: 3907. Total energy = 3336.5268 kcal/mol (3330.9858 without restraints) Performing minimization step: 3908. Total energy = 3336.4740 kcal/mol (3330.9284 without restraints) Performing minimization step: 3909. Total energy = 3336.4238 kcal/mol (3330.8841 without restraints) Performing minimization step: 3910. Total energy = 3336.3710 kcal/mol (3330.8269 without restraints) Performing minimization step: 3911. Total energy = 3336.3211 kcal/mol (3330.7830 without restraints) Performing minimization step: 3912. Total energy = 3336.2683 kcal/mol (3330.7257 without restraints) Performing minimization step: 3913. Total energy = 3336.2187 kcal/mol (3330.6821 without restraints) Performing minimization step: 3914. Total energy = 3336.1658 kcal/mol (3330.6246 without restraints) Performing minimization step: 3915. Total energy = 3336.1161 kcal/mol (3330.5809 without restraints) Performing minimization step: 3916. Total energy = 3336.0633 kcal/mol (3330.5235 without restraints) Performing minimization step: 3917. Total energy = 3336.0137 kcal/mol (3330.4801 without restraints) Performing minimization step: 3918. Total energy = 3335.9614 kcal/mol (3330.4231 without restraints) Performing minimization step: 3919. Total energy = 3335.9117 kcal/mol (3330.3794 without restraints) Performing minimization step: 3920. Total energy = 3335.8592 kcal/mol (3330.3223 without restraints) Performing minimization step: 3921. Total energy = 3335.8102 kcal/mol (3330.2793 without restraints) Performing minimization step: 3922. Total energy = 3335.7574 kcal/mol (3330.2221 without restraints) Performing minimization step: 3923. Total energy = 3335.7079 kcal/mol (3330.1786 without restraints) Performing minimization step: 3924. Total energy = 3335.6550 kcal/mol (3330.1211 without restraints) Performing minimization step: 3925. Total energy = 3335.6055 kcal/mol (3330.0776 without restraints) Performing minimization step: 3926. Total energy = 3335.5531 kcal/mol (3330.0207 without restraints) Performing minimization step: 3927. Total energy = 3335.5037 kcal/mol (3329.9772 without restraints) Performing minimization step: 3928. Total energy = 3335.4512 kcal/mol (3329.9201 without restraints) Performing minimization step: 3929. Total energy = 3335.4018 kcal/mol (3329.8767 without restraints) Performing minimization step: 3930. Total energy = 3335.3494 kcal/mol (3329.8198 without restraints) Performing minimization step: 3931. Total energy = 3335.2998 kcal/mol (3329.7762 without restraints) Performing minimization step: 3932. Total energy = 3335.2476 kcal/mol (3329.7194 without restraints) Performing minimization step: 3933. Total energy = 3335.1983 kcal/mol (3329.6761 without restraints) Performing minimization step: 3934. Total energy = 3335.1461 kcal/mol (3329.6194 without restraints) Performing minimization step: 3935. Total energy = 3335.0969 kcal/mol (3329.5761 without restraints) Performing minimization step: 3936. Total energy = 3335.0447 kcal/mol (3329.5194 without restraints) Performing minimization step: 3937. Total energy = 3334.9955 kcal/mol (3329.4762 without restraints) Performing minimization step: 3938. Total energy = 3334.9433 kcal/mol (3329.4195 without restraints) Performing minimization step: 3939. Total energy = 3334.8942 kcal/mol (3329.3763 without restraints) Performing minimization step: 3940. Total energy = 3334.8418 kcal/mol (3329.3193 without restraints) Performing minimization step: 3941. Total energy = 3334.7929 kcal/mol (3329.2764 without restraints) Performing minimization step: 3942. Total energy = 3334.7410 kcal/mol (3329.2200 without restraints) Performing minimization step: 3943. Total energy = 3334.6920 kcal/mol (3329.1770 without restraints) Performing minimization step: 3944. Total energy = 3334.6397 kcal/mol (3329.1202 without restraints) Performing minimization step: 3945. Total energy = 3334.5907 kcal/mol (3329.0771 without restraints) Performing minimization step: 3946. Total energy = 3334.5388 kcal/mol (3329.0207 without restraints) Performing minimization step: 3947. Total energy = 3334.4899 kcal/mol (3328.9778 without restraints) Performing minimization step: 3948. Total energy = 3334.4380 kcal/mol (3328.9213 without restraints) Performing minimization step: 3949. Total energy = 3334.3891 kcal/mol (3328.8784 without restraints) Performing minimization step: 3950. Total energy = 3334.3370 kcal/mol (3328.8216 without restraints) Performing minimization step: 3951. Total energy = 3334.2879 kcal/mol (3328.7786 without restraints) Performing minimization step: 3952. Total energy = 3334.2361 kcal/mol (3328.7223 without restraints) Performing minimization step: 3953. Total energy = 3334.1875 kcal/mol (3328.6797 without restraints) Performing minimization step: 3954. Total energy = 3334.1358 kcal/mol (3328.6234 without restraints) Performing minimization step: 3955. Total energy = 3334.0868 kcal/mol (3328.5803 without restraints) Performing minimization step: 3956. Total energy = 3334.0351 kcal/mol (3328.5241 without restraints) Performing minimization step: 3957. Total energy = 3333.9864 kcal/mol (3328.4814 without restraints) Performing minimization step: 3958. Total energy = 3333.9346 kcal/mol (3328.4251 without restraints) Performing minimization step: 3959. Total energy = 3333.8860 kcal/mol (3328.3824 without restraints) Performing minimization step: 3960. Total energy = 3333.8343 kcal/mol (3328.3262 without restraints) Performing minimization step: 3961. Total energy = 3333.7855 kcal/mol (3328.2833 without restraints) Performing minimization step: 3962. Total energy = 3333.7339 kcal/mol (3328.2272 without restraints) Performing minimization step: 3963. Total energy = 3333.6852 kcal/mol (3328.1845 without restraints) Performing minimization step: 3964. Total energy = 3333.6334 kcal/mol (3328.1281 without restraints) Performing minimization step: 3965. Total energy = 3333.5851 kcal/mol (3328.0858 without restraints) Performing minimization step: 3966. Total energy = 3333.5336 kcal/mol (3328.0298 without restraints) Performing minimization step: 3967. Total energy = 3333.4848 kcal/mol (3327.9869 without restraints) Performing minimization step: 3968. Total energy = 3333.4333 kcal/mol (3327.9309 without restraints) Performing minimization step: 3969. Total energy = 3333.3848 kcal/mol (3327.8882 without restraints) Performing minimization step: 3970. Total energy = 3333.3332 kcal/mol (3327.8321 without restraints) Performing minimization step: 3971. Total energy = 3333.2847 kcal/mol (3327.7897 without restraints) Performing minimization step: 3972. Total energy = 3333.2334 kcal/mol (3327.7336 without restraints) Performing minimization step: 3973. Total energy = 3333.1850 kcal/mol (3327.6913 without restraints) Performing minimization step: 3974. Total energy = 3333.1336 kcal/mol (3327.6354 without restraints) Performing minimization step: 3975. Total energy = 3333.0850 kcal/mol (3327.5928 without restraints) Performing minimization step: 3976. Total energy = 3333.0338 kcal/mol (3327.5370 without restraints) Performing minimization step: 3977. Total energy = 3332.9855 kcal/mol (3327.4947 without restraints) Performing minimization step: 3978. Total energy = 3332.9344 kcal/mol (3327.4390 without restraints) Performing minimization step: 3979. Total energy = 3332.8862 kcal/mol (3327.3968 without restraints) Performing minimization step: 3980. Total energy = 3332.8352 kcal/mol (3327.3413 without restraints) Performing minimization step: 3981. Total energy = 3332.7871 kcal/mol (3327.2991 without restraints) Performing minimization step: 3982. Total energy = 3332.7360 kcal/mol (3327.2435 without restraints) Performing minimization step: 3983. Total energy = 3332.6881 kcal/mol (3327.2015 without restraints) Performing minimization step: 3984. Total energy = 3332.6371 kcal/mol (3327.1459 without restraints) Performing minimization step: 3985. Total energy = 3332.5890 kcal/mol (3327.1038 without restraints) Performing minimization step: 3986. Total energy = 3332.5380 kcal/mol (3327.0483 without restraints) Performing minimization step: 3987. Total energy = 3332.4900 kcal/mol (3327.0062 without restraints) Performing minimization step: 3988. Total energy = 3332.4391 kcal/mol (3326.9507 without restraints) Performing minimization step: 3989. Total energy = 3332.3907 kcal/mol (3326.9082 without restraints) Performing minimization step: 3990. Total energy = 3332.3397 kcal/mol (3326.8528 without restraints) Performing minimization step: 3991. Total energy = 3332.2916 kcal/mol (3326.8106 without restraints) Performing minimization step: 3992. Total energy = 3332.2408 kcal/mol (3326.7552 without restraints) Performing minimization step: 3993. Total energy = 3332.1929 kcal/mol (3326.7133 without restraints) Performing minimization step: 3994. Total energy = 3332.1419 kcal/mol (3326.6575 without restraints) Performing minimization step: 3995. Total energy = 3332.0936 kcal/mol (3326.6153 without restraints) Performing minimization step: 3996. Total energy = 3332.0431 kcal/mol (3326.5603 without restraints) Performing minimization step: 3997. Total energy = 3331.9953 kcal/mol (3326.5184 without restraints) Performing minimization step: 3998. Total energy = 3331.9445 kcal/mol (3326.4632 without restraints) Performing minimization step: 3999. Total energy = 3331.8967 kcal/mol (3326.4214 without restraints) Performing minimization step: 4000. Total energy = 3331.8461 kcal/mol (3326.3662 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e0aaf9ce/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 4001. Total energy = 3331.7984 kcal/mol (3326.3245 without restraints) Performing minimization step: 4002. Total energy = 3331.7476 kcal/mol (3326.2690 without restraints) Performing minimization step: 4003. Total energy = 3331.7000 kcal/mol (3326.2274 without restraints) Performing minimization step: 4004. Total energy = 3331.6491 kcal/mol (3326.1720 without restraints) Performing minimization step: 4005. Total energy = 3331.6006 kcal/mol (3326.1294 without restraints) Performing minimization step: 4006. Total energy = 3331.5501 kcal/mol (3326.0743 without restraints) Performing minimization step: 4007. Total energy = 3331.5027 kcal/mol (3326.0329 without restraints) Performing minimization step: 4008. Total energy = 3331.4523 kcal/mol (3325.9779 without restraints) Performing minimization step: 4009. Total energy = 3331.4047 kcal/mol (3325.9364 without restraints) Performing minimization step: 4010. Total energy = 3331.3545 kcal/mol (3325.8816 without restraints) Performing minimization step: 4011. Total energy = 3331.3067 kcal/mol (3325.8396 without restraints) Performing minimization step: 4012. Total energy = 3331.2563 kcal/mol (3325.7847 without restraints) Performing minimization step: 4013. Total energy = 3331.2086 kcal/mol (3325.7430 without restraints) Performing minimization step: 4014. Total energy = 3331.1584 kcal/mol (3325.6881 without restraints) Performing minimization step: 4015. Total energy = 3331.1108 kcal/mol (3325.6467 without restraints) Performing minimization step: 4016. Total energy = 3331.0610 kcal/mol (3325.5923 without restraints) Performing minimization step: 4017. Total energy = 3331.0137 kcal/mol (3325.5507 without restraints) Performing minimization step: 4018. Total energy = 3330.9631 kcal/mol (3325.4956 without restraints) Performing minimization step: 4019. Total energy = 3330.9157 kcal/mol (3325.4543 without restraints) Performing minimization step: 4020. Total energy = 3330.8656 kcal/mol (3325.3994 without restraints) Performing minimization step: 4021. Total energy = 3330.8183 kcal/mol (3325.3582 without restraints) Performing minimization step: 4022. Total energy = 3330.7681 kcal/mol (3325.3035 without restraints) Performing minimization step: 4023. Total energy = 3330.7210 kcal/mol (3325.2623 without restraints) Performing minimization step: 4024. Total energy = 3330.6707 kcal/mol (3325.2074 without restraints) Performing minimization step: 4025. Total energy = 3330.6233 kcal/mol (3325.1660 without restraints) Performing minimization step: 4026. Total energy = 3330.5734 kcal/mol (3325.1116 without restraints) Performing minimization step: 4027. Total energy = 3330.5264 kcal/mol (3325.0705 without restraints) Performing minimization step: 4028. Total energy = 3330.4766 kcal/mol (3325.0159 without restraints) Performing minimization step: 4029. Total energy = 3330.4283 kcal/mol (3324.9738 without restraints) Performing minimization step: 4030. Total energy = 3330.3784 kcal/mol (3324.9192 without restraints) Performing minimization step: 4031. Total energy = 3330.3313 kcal/mol (3324.8781 without restraints) Performing minimization step: 4032. Total energy = 3330.2815 kcal/mol (3324.8236 without restraints) Performing minimization step: 4033. Total energy = 3330.2345 kcal/mol (3324.7827 without restraints) Performing minimization step: 4034. Total energy = 3330.1847 kcal/mol (3324.7282 without restraints) Performing minimization step: 4035. Total energy = 3330.1377 kcal/mol (3324.6873 without restraints) Performing minimization step: 4036. Total energy = 3330.0879 kcal/mol (3324.6328 without restraints) Performing minimization step: 4037. Total energy = 3330.0410 kcal/mol (3324.5919 without restraints) Performing minimization step: 4038. Total energy = 3329.9912 kcal/mol (3324.5373 without restraints) Performing minimization step: 4039. Total energy = 3329.9440 kcal/mol (3324.4963 without restraints) Performing minimization step: 4040. Total energy = 3329.8943 kcal/mol (3324.4420 without restraints) Performing minimization step: 4041. Total energy = 3329.8475 kcal/mol (3324.4012 without restraints) Performing minimization step: 4042. Total energy = 3329.7979 kcal/mol (3324.3469 without restraints) Performing minimization step: 4043. Total energy = 3329.7509 kcal/mol (3324.3059 without restraints) Performing minimization step: 4044. Total energy = 3329.7013 kcal/mol (3324.2516 without restraints) Performing minimization step: 4045. Total energy = 3329.6545 kcal/mol (3324.2109 without restraints) Performing minimization step: 4046. Total energy = 3329.6049 kcal/mol (3324.1567 without restraints) Performing minimization step: 4047. Total energy = 3329.5583 kcal/mol (3324.1161 without restraints) Performing minimization step: 4048. Total energy = 3329.5089 kcal/mol (3324.0620 without restraints) Performing minimization step: 4049. Total energy = 3329.4622 kcal/mol (3324.0213 without restraints) Performing minimization step: 4050. Total energy = 3329.4126 kcal/mol (3323.9670 without restraints) Performing minimization step: 4051. Total energy = 3329.3660 kcal/mol (3323.9265 without restraints) Performing minimization step: 4052. Total energy = 3329.3166 kcal/mol (3323.8724 without restraints) Performing minimization step: 4053. Total energy = 3329.2700 kcal/mol (3323.8319 without restraints) Performing minimization step: 4054. Total energy = 3329.2206 kcal/mol (3323.7778 without restraints) Performing minimization step: 4055. Total energy = 3329.1742 kcal/mol (3323.7375 without restraints) Performing minimization step: 4056. Total energy = 3329.1248 kcal/mol (3323.6832 without restraints) Performing minimization step: 4057. Total energy = 3329.0738 kcal/mol (3323.6330 without restraints) Performing minimization step: 4058. Total energy = 3329.0319 kcal/mol (3323.5920 without restraints) Performing minimization step: 4059. Total energy = 3328.9793 kcal/mol (3323.5445 without restraints) Performing minimization step: 4060. Total energy = 3328.9328 kcal/mol (3323.4945 without restraints) Performing minimization step: 4061. Total energy = 3328.8847 kcal/mol (3323.4518 without restraints) Performing minimization step: 4062. Total energy = 3328.8363 kcal/mol (3323.3990 without restraints) Performing minimization step: 4063. Total energy = 3328.7895 kcal/mol (3323.3581 without restraints) Performing minimization step: 4064. Total energy = 3328.7406 kcal/mol (3323.3045 without restraints) Performing minimization step: 4065. Total energy = 3328.6943 kcal/mol (3323.2643 without restraints) Performing minimization step: 4066. Total energy = 3328.6453 kcal/mol (3323.2106 without restraints) Performing minimization step: 4067. Total energy = 3328.5990 kcal/mol (3323.1705 without restraints) Performing minimization step: 4068. Total energy = 3328.5503 kcal/mol (3323.1170 without restraints) Performing minimization step: 4069. Total energy = 3328.5039 kcal/mol (3323.0766 without restraints) Performing minimization step: 4070. Total energy = 3328.4549 kcal/mol (3323.0229 without restraints) Performing minimization step: 4071. Total energy = 3328.4087 kcal/mol (3322.9827 without restraints) Performing minimization step: 4072. Total energy = 3328.3597 kcal/mol (3322.9292 without restraints) Performing minimization step: 4073. Total energy = 3328.3137 kcal/mol (3322.8891 without restraints) Performing minimization step: 4074. Total energy = 3328.2646 kcal/mol (3322.8352 without restraints) Performing minimization step: 4075. Total energy = 3328.2184 kcal/mol (3322.7951 without restraints) Performing minimization step: 4076. Total energy = 3328.1694 kcal/mol (3322.7414 without restraints) Performing minimization step: 4077. Total energy = 3328.1232 kcal/mol (3322.7013 without restraints) Performing minimization step: 4078. Total energy = 3328.0744 kcal/mol (3322.6477 without restraints) Performing minimization step: 4079. Total energy = 3328.0282 kcal/mol (3322.6076 without restraints) Performing minimization step: 4080. Total energy = 3327.9796 kcal/mol (3322.5543 without restraints) Performing minimization step: 4081. Total energy = 3327.9336 kcal/mol (3322.5143 without restraints) Performing minimization step: 4082. Total energy = 3327.8848 kcal/mol (3322.4609 without restraints) Performing minimization step: 4083. Total energy = 3327.8389 kcal/mol (3322.4210 without restraints) Performing minimization step: 4084. Total energy = 3327.7901 kcal/mol (3322.3675 without restraints) Performing minimization step: 4085. Total energy = 3327.7440 kcal/mol (3322.3275 without restraints) Performing minimization step: 4086. Total energy = 3327.6954 kcal/mol (3322.2741 without restraints) Performing minimization step: 4087. Total energy = 3327.6495 kcal/mol (3322.2343 without restraints) Performing minimization step: 4088. Total energy = 3327.6009 kcal/mol (3322.1810 without restraints) Performing minimization step: 4089. Total energy = 3327.5550 kcal/mol (3322.1410 without restraints) Performing minimization step: 4090. Total energy = 3327.5061 kcal/mol (3322.0875 without restraints) Performing minimization step: 4091. Total energy = 3327.4601 kcal/mol (3322.0475 without restraints) Performing minimization step: 4092. Total energy = 3327.4118 kcal/mol (3321.9945 without restraints) Performing minimization step: 4093. Total energy = 3327.3660 kcal/mol (3321.9548 without restraints) Performing minimization step: 4094. Total energy = 3327.3175 kcal/mol (3321.9015 without restraints) Performing minimization step: 4095. Total energy = 3327.2718 kcal/mol (3321.8619 without restraints) Performing minimization step: 4096. Total energy = 3327.2234 kcal/mol (3321.8087 without restraints) Performing minimization step: 4097. Total energy = 3327.1777 kcal/mol (3321.7691 without restraints) Performing minimization step: 4098. Total energy = 3327.1293 kcal/mol (3321.7161 without restraints) Performing minimization step: 4099. Total energy = 3327.0837 kcal/mol (3321.6764 without restraints) Performing minimization step: 4100. Total energy = 3327.0353 kcal/mol (3321.6233 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e0aaf9ce/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 4101. Total energy = 3326.9893 kcal/mol (3321.5833 without restraints) Performing minimization step: 4102. Total energy = 3326.9408 kcal/mol (3321.5302 without restraints) Performing minimization step: 4103. Total energy = 3326.8951 kcal/mol (3321.4905 without restraints) Performing minimization step: 4104. Total energy = 3326.8470 kcal/mol (3321.4377 without restraints) Performing minimization step: 4105. Total energy = 3326.8015 kcal/mol (3321.3981 without restraints) Performing minimization step: 4106. Total energy = 3326.7531 kcal/mol (3321.3452 without restraints) Performing minimization step: 4107. Total energy = 3326.7077 kcal/mol (3321.3058 without restraints) Performing minimization step: 4108. Total energy = 3326.6597 kcal/mol (3321.2531 without restraints) Performing minimization step: 4109. Total energy = 3326.6142 kcal/mol (3321.2136 without restraints) Performing minimization step: 4110. Total energy = 3326.5661 kcal/mol (3321.1607 without restraints) Performing minimization step: 4111. Total energy = 3326.5207 kcal/mol (3321.1215 without restraints) Performing minimization step: 4112. Total energy = 3326.4727 kcal/mol (3321.0687 without restraints) Performing minimization step: 4113. Total energy = 3326.4273 kcal/mol (3321.0293 without restraints) Performing minimization step: 4114. Total energy = 3326.3791 kcal/mol (3320.9764 without restraints) Performing minimization step: 4115. Total energy = 3326.3336 kcal/mol (3320.9370 without restraints) Performing minimization step: 4116. Total energy = 3326.2855 kcal/mol (3320.8842 without restraints) Performing minimization step: 4117. Total energy = 3326.2403 kcal/mol (3320.8448 without restraints) Performing minimization step: 4118. Total energy = 3326.1922 kcal/mol (3320.7923 without restraints) Performing minimization step: 4119. Total energy = 3326.1472 kcal/mol (3320.7532 without restraints) Performing minimization step: 4120. Total energy = 3326.0991 kcal/mol (3320.7004 without restraints) Performing minimization step: 4121. Total energy = 3326.0543 kcal/mol (3320.6616 without restraints) Performing minimization step: 4122. Total energy = 3326.0060 kcal/mol (3320.6086 without restraints) Performing minimization step: 4123. Total energy = 3325.9606 kcal/mol (3320.5693 without restraints) Performing minimization step: 4124. Total energy = 3325.9129 kcal/mol (3320.5169 without restraints) Performing minimization step: 4125. Total energy = 3325.8680 kcal/mol (3320.4779 without restraints) Performing minimization step: 4126. Total energy = 3325.8201 kcal/mol (3320.4254 without restraints) Performing minimization step: 4127. Total energy = 3325.7752 kcal/mol (3320.3864 without restraints) Performing minimization step: 4128. Total energy = 3325.7275 kcal/mol (3320.3341 without restraints) Performing minimization step: 4129. Total energy = 3325.6826 kcal/mol (3320.2952 without restraints) Performing minimization step: 4130. Total energy = 3325.6347 kcal/mol (3320.2426 without restraints) Performing minimization step: 4131. Total energy = 3325.5898 kcal/mol (3320.2038 without restraints) Performing minimization step: 4132. Total energy = 3325.5425 kcal/mol (3320.1516 without restraints) Performing minimization step: 4133. Total energy = 3325.4979 kcal/mol (3320.1130 without restraints) Performing minimization step: 4134. Total energy = 3325.4502 kcal/mol (3320.0607 without restraints) Performing minimization step: 4135. Total energy = 3325.4054 kcal/mol (3320.0218 without restraints) Performing minimization step: 4136. Total energy = 3325.3576 kcal/mol (3319.9693 without restraints) Performing minimization step: 4137. Total energy = 3325.3131 kcal/mol (3319.9311 without restraints) Performing minimization step: 4138. Total energy = 3325.2657 kcal/mol (3319.8788 without restraints) Performing minimization step: 4139. Total energy = 3325.2212 kcal/mol (3319.8403 without restraints) Performing minimization step: 4140. Total energy = 3325.1734 kcal/mol (3319.7878 without restraints) Performing minimization step: 4141. Total energy = 3325.1287 kcal/mol (3319.7491 without restraints) Performing minimization step: 4142. Total energy = 3325.0812 kcal/mol (3319.6969 without restraints) Performing minimization step: 4143. Total energy = 3325.0365 kcal/mol (3319.6580 without restraints) Performing minimization step: 4144. Total energy = 3324.9889 kcal/mol (3319.6059 without restraints) Performing minimization step: 4145. Total energy = 3324.9447 kcal/mol (3319.5677 without restraints) Performing minimization step: 4146. Total energy = 3324.8973 kcal/mol (3319.5156 without restraints) Performing minimization step: 4147. Total energy = 3324.8527 kcal/mol (3319.4770 without restraints) Performing minimization step: 4148. Total energy = 3324.8052 kcal/mol (3319.4248 without restraints) Performing minimization step: 4149. Total energy = 3324.7607 kcal/mol (3319.3862 without restraints) Performing minimization step: 4150. Total energy = 3324.7133 kcal/mol (3319.3342 without restraints) Performing minimization step: 4151. Total energy = 3324.6687 kcal/mol (3319.2955 without restraints) Performing minimization step: 4152. Total energy = 3324.6211 kcal/mol (3319.2432 without restraints) Performing minimization step: 4153. Total energy = 3324.5766 kcal/mol (3319.2047 without restraints) Performing minimization step: 4154. Total energy = 3324.5291 kcal/mol (3319.1525 without restraints) Performing minimization step: 4155. Total energy = 3324.4849 kcal/mol (3319.1144 without restraints) Performing minimization step: 4156. Total energy = 3324.4378 kcal/mol (3319.0626 without restraints) Performing minimization step: 4157. Total energy = 3324.3928 kcal/mol (3319.0236 without restraints) Performing minimization step: 4158. Total energy = 3324.3456 kcal/mol (3318.9716 without restraints) Performing minimization step: 4159. Total energy = 3324.3013 kcal/mol (3318.9334 without restraints) Performing minimization step: 4160. Total energy = 3324.2542 kcal/mol (3318.8815 without restraints) Performing minimization step: 4161. Total energy = 3324.2099 kcal/mol (3318.8433 without restraints) Performing minimization step: 4162. Total energy = 3324.1628 kcal/mol (3318.7914 without restraints) Performing minimization step: 4163. Total energy = 3324.1185 kcal/mol (3318.7532 without restraints) Performing minimization step: 4164. Total energy = 3324.0713 kcal/mol (3318.7012 without restraints) Performing minimization step: 4165. Total energy = 3324.0273 kcal/mol (3318.6632 without restraints) Performing minimization step: 4166. Total energy = 3323.9799 kcal/mol (3318.6111 without restraints) Performing minimization step: 4167. Total energy = 3323.9357 kcal/mol (3318.5728 without restraints) Performing minimization step: 4168. Total energy = 3323.8885 kcal/mol (3318.5210 without restraints) Performing minimization step: 4169. Total energy = 3323.8444 kcal/mol (3318.4829 without restraints) Performing minimization step: 4170. Total energy = 3323.7977 kcal/mol (3318.4314 without restraints) Performing minimization step: 4171. Total energy = 3323.7536 kcal/mol (3318.3933 without restraints) Performing minimization step: 4172. Total energy = 3323.7066 kcal/mol (3318.3417 without restraints) Performing minimization step: 4173. Total energy = 3323.6626 kcal/mol (3318.3037 without restraints) Performing minimization step: 4174. Total energy = 3323.6158 kcal/mol (3318.2521 without restraints) Performing minimization step: 4175. Total energy = 3323.5718 kcal/mol (3318.2141 without restraints) Performing minimization step: 4176. Total energy = 3323.5247 kcal/mol (3318.1623 without restraints) Performing minimization step: 4177. Total energy = 3323.4808 kcal/mol (3318.1244 without restraints) Performing minimization step: 4178. Total energy = 3323.4340 kcal/mol (3318.0729 without restraints) Performing minimization step: 4179. Total energy = 3323.3901 kcal/mol (3318.0350 without restraints) Performing minimization step: 4180. Total energy = 3323.3435 kcal/mol (3317.9837 without restraints) Performing minimization step: 4181. Total energy = 3323.2997 kcal/mol (3317.9458 without restraints) Performing minimization step: 4182. Total energy = 3323.2528 kcal/mol (3317.8942 without restraints) Performing minimization step: 4183. Total energy = 3323.2090 kcal/mol (3317.8564 without restraints) Performing minimization step: 4184. Total energy = 3323.1623 kcal/mol (3317.8050 without restraints) Performing minimization step: 4185. Total energy = 3323.1185 kcal/mol (3317.7672 without restraints) Performing minimization step: 4186. Total energy = 3323.0719 kcal/mol (3317.7159 without restraints) Performing minimization step: 4187. Total energy = 3323.0280 kcal/mol (3317.6779 without restraints) Performing minimization step: 4188. Total energy = 3322.9811 kcal/mol (3317.6264 without restraints) Performing minimization step: 4189. Total energy = 3322.9374 kcal/mol (3317.5886 without restraints) Performing minimization step: 4190. Total energy = 3322.8906 kcal/mol (3317.5370 without restraints) Performing minimization step: 4191. Total energy = 3322.8468 kcal/mol (3317.4993 without restraints) Performing minimization step: 4192. Total energy = 3322.8001 kcal/mol (3317.4479 without restraints) Performing minimization step: 4193. Total energy = 3322.7565 kcal/mol (3317.4103 without restraints) Performing minimization step: 4194. Total energy = 3322.7102 kcal/mol (3317.3593 without restraints) Performing minimization step: 4195. Total energy = 3322.6666 kcal/mol (3317.3217 without restraints) Performing minimization step: 4196. Total energy = 3322.6202 kcal/mol (3317.2706 without restraints) Performing minimization step: 4197. Total energy = 3322.5767 kcal/mol (3317.2329 without restraints) Performing minimization step: 4198. Total energy = 3322.5302 kcal/mol (3317.1819 without restraints) Performing minimization step: 4199. Total energy = 3322.4867 kcal/mol (3317.1443 without restraints) Performing minimization step: 4200. Total energy = 3322.4401 kcal/mol (3317.0929 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e0aaf9ce/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 4201. Total energy = 3322.3966 kcal/mol (3317.0554 without restraints) Performing minimization step: 4202. Total energy = 3322.3502 kcal/mol (3317.0044 without restraints) Performing minimization step: 4203. Total energy = 3322.3068 kcal/mol (3316.9669 without restraints) Performing minimization step: 4204. Total energy = 3322.2603 kcal/mol (3316.9157 without restraints) Performing minimization step: 4205. Total energy = 3322.2171 kcal/mol (3316.8785 without restraints) Performing minimization step: 4206. Total energy = 3322.1709 kcal/mol (3316.8275 without restraints) Performing minimization step: 4207. Total energy = 3322.1275 kcal/mol (3316.7901 without restraints) Performing minimization step: 4208. Total energy = 3322.0813 kcal/mol (3316.7392 without restraints) Performing minimization step: 4209. Total energy = 3322.0377 kcal/mol (3316.7016 without restraints) Performing minimization step: 4210. Total energy = 3321.9916 kcal/mol (3316.6509 without restraints) Performing minimization step: 4211. Total energy = 3321.9485 kcal/mol (3316.6136 without restraints) Performing minimization step: 4212. Total energy = 3321.9025 kcal/mol (3316.5630 without restraints) Performing minimization step: 4213. Total energy = 3321.8591 kcal/mol (3316.5255 without restraints) Performing minimization step: 4214. Total energy = 3321.8131 kcal/mol (3316.4748 without restraints) Performing minimization step: 4215. Total energy = 3321.7701 kcal/mol (3316.4378 without restraints) Performing minimization step: 4216. Total energy = 3321.7244 kcal/mol (3316.3874 without restraints) Performing minimization step: 4217. Total energy = 3321.6812 kcal/mol (3316.3501 without restraints) Performing minimization step: 4218. Total energy = 3321.6353 kcal/mol (3316.2995 without restraints) Performing minimization step: 4219. Total energy = 3321.5922 kcal/mol (3316.2623 without restraints) Performing minimization step: 4220. Total energy = 3321.5464 kcal/mol (3316.2119 without restraints) Performing minimization step: 4221. Total energy = 3321.5031 kcal/mol (3316.1746 without restraints) Performing minimization step: 4222. Total energy = 3321.4575 kcal/mol (3316.1242 without restraints) Performing minimization step: 4223. Total energy = 3321.4141 kcal/mol (3316.0869 without restraints) Performing minimization step: 4224. Total energy = 3321.3682 kcal/mol (3316.0359 without restraints) Performing minimization step: 4225. Total energy = 3321.3250 kcal/mol (3315.9989 without restraints) Performing minimization step: 4226. Total energy = 3321.2791 kcal/mol (3315.9483 without restraints) Performing minimization step: 4227. Total energy = 3321.2361 kcal/mol (3315.9113 without restraints) Performing minimization step: 4228. Total energy = 3321.1901 kcal/mol (3315.8605 without restraints) Performing minimization step: 4229. Total energy = 3321.1472 kcal/mol (3315.8238 without restraints) Performing minimization step: 4230. Total energy = 3321.1015 kcal/mol (3315.7732 without restraints) Performing minimization step: 4231. Total energy = 3321.0586 kcal/mol (3315.7363 without restraints) Performing minimization step: 4232. Total energy = 3321.0133 kcal/mol (3315.6862 without restraints) Performing minimization step: 4233. Total energy = 3320.9704 kcal/mol (3315.6494 without restraints) Performing minimization step: 4234. Total energy = 3320.9246 kcal/mol (3315.5985 without restraints) Performing minimization step: 4235. Total energy = 3320.8815 kcal/mol (3315.5617 without restraints) Performing minimization step: 4236. Total energy = 3320.8359 kcal/mol (3315.5113 without restraints) Performing minimization step: 4237. Total energy = 3320.7931 kcal/mol (3315.4745 without restraints) Performing minimization step: 4238. Total energy = 3320.7474 kcal/mol (3315.4241 without restraints) Performing minimization step: 4239. Total energy = 3320.7046 kcal/mol (3315.3873 without restraints) Performing minimization step: 4240. Total energy = 3320.6590 kcal/mol (3315.3370 without restraints) Performing minimization step: 4241. Total energy = 3320.6163 kcal/mol (3315.3002 without restraints) Performing minimization step: 4242. Total energy = 3320.5709 kcal/mol (3315.2499 without restraints) Performing minimization step: 4243. Total energy = 3320.5284 kcal/mol (3315.2135 without restraints) Performing minimization step: 4244. Total energy = 3320.4826 kcal/mol (3315.1630 without restraints) Performing minimization step: 4245. Total energy = 3320.4400 kcal/mol (3315.1264 without restraints) Performing minimization step: 4246. Total energy = 3320.3945 kcal/mol (3315.0762 without restraints) Performing minimization step: 4247. Total energy = 3320.3520 kcal/mol (3315.0396 without restraints) Performing minimization step: 4248. Total energy = 3320.3062 kcal/mol (3314.9890 without restraints) Performing minimization step: 4249. Total energy = 3320.2636 kcal/mol (3314.9525 without restraints) Performing minimization step: 4250. Total energy = 3320.2177 kcal/mol (3314.9018 without restraints) Performing minimization step: 4251. Total energy = 3320.1752 kcal/mol (3314.8653 without restraints) Performing minimization step: 4252. Total energy = 3320.1299 kcal/mol (3314.8152 without restraints) Performing minimization step: 4253. Total energy = 3320.0874 kcal/mol (3314.7787 without restraints) Performing minimization step: 4254. Total energy = 3320.0421 kcal/mol (3314.7286 without restraints) Performing minimization step: 4255. Total energy = 3319.9995 kcal/mol (3314.6920 without restraints) Performing minimization step: 4256. Total energy = 3319.9542 kcal/mol (3314.6420 without restraints) Performing minimization step: 4257. Total energy = 3319.9117 kcal/mol (3314.6055 without restraints) Performing minimization step: 4258. Total energy = 3319.8660 kcal/mol (3314.5549 without restraints) Performing minimization step: 4259. Total energy = 3319.8235 kcal/mol (3314.5185 without restraints) Performing minimization step: 4260. Total energy = 3319.7782 kcal/mol (3314.4685 without restraints) Performing minimization step: 4261. Total energy = 3319.7359 kcal/mol (3314.4322 without restraints) Performing minimization step: 4262. Total energy = 3319.6907 kcal/mol (3314.3821 without restraints) Performing minimization step: 4263. Total energy = 3319.6483 kcal/mol (3314.3458 without restraints) Performing minimization step: 4264. Total energy = 3319.6031 kcal/mol (3314.2958 without restraints) Performing minimization step: 4265. Total energy = 3319.5608 kcal/mol (3314.2595 without restraints) Performing minimization step: 4266. Total energy = 3319.5159 kcal/mol (3314.2100 without restraints) Performing minimization step: 4267. Total energy = 3319.4740 kcal/mol (3314.1739 without restraints) Performing minimization step: 4268. Total energy = 3319.4291 kcal/mol (3314.1243 without restraints) Performing minimization step: 4269. Total energy = 3319.3868 kcal/mol (3314.0879 without restraints) Performing minimization step: 4270. Total energy = 3319.3418 kcal/mol (3314.0382 without restraints) Performing minimization step: 4271. Total energy = 3319.2996 kcal/mol (3314.0020 without restraints) Performing minimization step: 4272. Total energy = 3319.2546 kcal/mol (3313.9522 without restraints) Performing minimization step: 4273. Total energy = 3319.2127 kcal/mol (3313.9163 without restraints) Performing minimization step: 4274. Total energy = 3319.1677 kcal/mol (3313.8666 without restraints) Performing minimization step: 4275. Total energy = 3319.1257 kcal/mol (3313.8305 without restraints) Performing minimization step: 4276. Total energy = 3319.0807 kcal/mol (3313.7806 without restraints) Performing minimization step: 4277. Total energy = 3319.0385 kcal/mol (3313.7445 without restraints) Performing minimization step: 4278. Total energy = 3318.9938 kcal/mol (3313.6951 without restraints) Performing minimization step: 4279. Total energy = 3318.9518 kcal/mol (3313.6589 without restraints) Performing minimization step: 4280. Total energy = 3318.9068 kcal/mol (3313.6093 without restraints) Performing minimization step: 4281. Total energy = 3318.8649 kcal/mol (3313.5735 without restraints) Performing minimization step: 4282. Total energy = 3318.8202 kcal/mol (3313.5239 without restraints) Performing minimization step: 4283. Total energy = 3318.7784 kcal/mol (3313.4881 without restraints) Performing minimization step: 4284. Total energy = 3318.7336 kcal/mol (3313.4386 without restraints) Performing minimization step: 4285. Total energy = 3318.6917 kcal/mol (3313.4026 without restraints) Performing minimization step: 4286. Total energy = 3318.6469 kcal/mol (3313.3529 without restraints) Performing minimization step: 4287. Total energy = 3318.6050 kcal/mol (3313.3171 without restraints) Performing minimization step: 4288. Total energy = 3318.5601 kcal/mol (3313.2675 without restraints) Performing minimization step: 4289. Total energy = 3318.5183 kcal/mol (3313.2316 without restraints) Performing minimization step: 4290. Total energy = 3318.4736 kcal/mol (3313.1821 without restraints) Performing minimization step: 4291. Total energy = 3318.4318 kcal/mol (3313.1464 without restraints) Performing minimization step: 4292. Total energy = 3318.3870 kcal/mol (3313.0968 without restraints) Performing minimization step: 4293. Total energy = 3318.3451 kcal/mol (3313.0608 without restraints) Performing minimization step: 4294. Total energy = 3318.3005 kcal/mol (3313.0115 without restraints) Performing minimization step: 4295. Total energy = 3318.2585 kcal/mol (3312.9755 without restraints) Performing minimization step: 4296. Total energy = 3318.2140 kcal/mol (3312.9262 without restraints) Performing minimization step: 4297. Total energy = 3318.1723 kcal/mol (3312.8905 without restraints) Performing minimization step: 4298. Total energy = 3318.1277 kcal/mol (3312.8412 without restraints) Performing minimization step: 4299. Total energy = 3318.0863 kcal/mol (3312.8058 without restraints) Performing minimization step: 4300. Total energy = 3318.0419 kcal/mol (3312.7565 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e0aaf9ce/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 4301. Total energy = 3318.0004 kcal/mol (3312.7209 without restraints) Performing minimization step: 4302. Total energy = 3317.9557 kcal/mol (3312.6715 without restraints) Performing minimization step: 4303. Total energy = 3317.9142 kcal/mol (3312.6360 without restraints) Performing minimization step: 4304. Total energy = 3317.8698 kcal/mol (3312.5868 without restraints) Performing minimization step: 4305. Total energy = 3317.8158 kcal/mol (3312.5244 without restraints) Performing minimization step: 4306. Total energy = 3317.7522 kcal/mol (3312.4552 without restraints) Performing minimization step: 4307. Total energy = 3317.7088 kcal/mol (3312.4289 without restraints) Performing minimization step: 4308. Total energy = 3317.6644 kcal/mol (3312.3848 without restraints) Performing minimization step: 4309. Total energy = 3317.6208 kcal/mol (3312.3463 without restraints) Performing minimization step: 4310. Total energy = 3317.5776 kcal/mol (3312.2987 without restraints) Performing minimization step: 4311. Total energy = 3317.5354 kcal/mol (3312.2623 without restraints) Performing minimization step: 4312. Total energy = 3317.4915 kcal/mol (3312.2139 without restraints) Performing minimization step: 4313. Total energy = 3317.4500 kcal/mol (3312.1783 without restraints) Performing minimization step: 4314. Total energy = 3317.4060 kcal/mol (3312.1294 without restraints) Performing minimization step: 4315. Total energy = 3317.3647 kcal/mol (3312.0940 without restraints) Performing minimization step: 4316. Total energy = 3317.3208 kcal/mol (3312.0456 without restraints) Performing minimization step: 4317. Total energy = 3317.2791 kcal/mol (3312.0096 without restraints) Performing minimization step: 4318. Total energy = 3317.2351 kcal/mol (3311.9611 without restraints) Performing minimization step: 4319. Total energy = 3317.1937 kcal/mol (3311.9254 without restraints) Performing minimization step: 4320. Total energy = 3317.1497 kcal/mol (3311.8768 without restraints) Performing minimization step: 4321. Total energy = 3317.1081 kcal/mol (3311.8410 without restraints) Performing minimization step: 4322. Total energy = 3317.0646 kcal/mol (3311.7931 without restraints) Performing minimization step: 4323. Total energy = 3317.0231 kcal/mol (3311.7571 without restraints) Performing minimization step: 4324. Total energy = 3316.9794 kcal/mol (3311.7089 without restraints) Performing minimization step: 4325. Total energy = 3316.9377 kcal/mol (3311.6729 without restraints) Performing minimization step: 4326. Total energy = 3316.8942 kcal/mol (3311.6250 without restraints) Performing minimization step: 4327. Total energy = 3316.8528 kcal/mol (3311.5892 without restraints) Performing minimization step: 4328. Total energy = 3316.8094 kcal/mol (3311.5413 without restraints) Performing minimization step: 4329. Total energy = 3316.7680 kcal/mol (3311.5056 without restraints) Performing minimization step: 4330. Total energy = 3316.7242 kcal/mol (3311.4573 without restraints) Performing minimization step: 4331. Total energy = 3316.6828 kcal/mol (3311.4216 without restraints) Performing minimization step: 4332. Total energy = 3316.6393 kcal/mol (3311.3735 without restraints) Performing minimization step: 4333. Total energy = 3316.5973 kcal/mol (3311.3370 without restraints) Performing minimization step: 4334. Total energy = 3316.5540 kcal/mol (3311.2893 without restraints) Performing minimization step: 4335. Total energy = 3316.5122 kcal/mol (3311.2534 without restraints) Performing minimization step: 4336. Total energy = 3316.4688 kcal/mol (3311.2054 without restraints) Performing minimization step: 4337. Total energy = 3316.4273 kcal/mol (3311.1694 without restraints) Performing minimization step: 4338. Total energy = 3316.3843 kcal/mol (3311.1221 without restraints) Performing minimization step: 4339. Total energy = 3316.3427 kcal/mol (3311.0862 without restraints) Performing minimization step: 4340. Total energy = 3316.2997 kcal/mol (3311.0390 without restraints) Performing minimization step: 4341. Total energy = 3316.2585 kcal/mol (3311.0030 without restraints) Performing minimization step: 4342. Total energy = 3316.2158 kcal/mol (3310.9560 without restraints) Performing minimization step: 4343. Total energy = 3316.1742 kcal/mol (3310.9201 without restraints) Performing minimization step: 4344. Total energy = 3316.1313 kcal/mol (3310.8728 without restraints) Performing minimization step: 4345. Total energy = 3316.0899 kcal/mol (3310.8367 without restraints) Performing minimization step: 4346. Total energy = 3316.0470 kcal/mol (3310.7896 without restraints) Performing minimization step: 4347. Total energy = 3316.0054 kcal/mol (3310.7536 without restraints) Performing minimization step: 4348. Total energy = 3315.9623 kcal/mol (3310.7061 without restraints) Performing minimization step: 4349. Total energy = 3315.9208 kcal/mol (3310.6699 without restraints) Performing minimization step: 4350. Total energy = 3315.8777 kcal/mol (3310.6227 without restraints) Performing minimization step: 4351. Total energy = 3315.8361 kcal/mol (3310.5863 without restraints) Performing minimization step: 4352. Total energy = 3315.7934 kcal/mol (3310.5396 without restraints) Performing minimization step: 4353. Total energy = 3315.7518 kcal/mol (3310.5033 without restraints) Performing minimization step: 4354. Total energy = 3315.7094 kcal/mol (3310.4569 without restraints) Performing minimization step: 4355. Total energy = 3315.6679 kcal/mol (3310.4206 without restraints) Performing minimization step: 4356. Total energy = 3315.6254 kcal/mol (3310.3739 without restraints) Performing minimization step: 4357. Total energy = 3315.5837 kcal/mol (3310.3375 without restraints) Performing minimization step: 4358. Total energy = 3315.5413 kcal/mol (3310.2910 without restraints) Performing minimization step: 4359. Total energy = 3315.4993 kcal/mol (3310.2543 without restraints) Performing minimization step: 4360. Total energy = 3315.4569 kcal/mol (3310.2081 without restraints) Performing minimization step: 4361. Total energy = 3315.4142 kcal/mol (3310.1684 without restraints) Performing minimization step: 4362. Total energy = 3315.3730 kcal/mol (3310.1235 without restraints) Performing minimization step: 4363. Total energy = 3315.3310 kcal/mol (3310.0869 without restraints) Performing minimization step: 4364. Total energy = 3315.2898 kcal/mol (3310.0425 without restraints) Performing minimization step: 4365. Total energy = 3315.2478 kcal/mol (3310.0059 without restraints) Performing minimization step: 4366. Total energy = 3315.2063 kcal/mol (3309.9608 without restraints) Performing minimization step: 4367. Total energy = 3315.1646 kcal/mol (3309.9245 without restraints) Performing minimization step: 4368. Total energy = 3315.1219 kcal/mol (3309.8772 without restraints) Performing minimization step: 4369. Total energy = 3315.0798 kcal/mol (3309.8401 without restraints) Performing minimization step: 4370. Total energy = 3315.0383 kcal/mol (3309.7952 without restraints) Performing minimization step: 4371. Total energy = 3314.9967 kcal/mol (3309.7590 without restraints) Performing minimization step: 4372. Total energy = 3314.9543 kcal/mol (3309.7121 without restraints) Performing minimization step: 4373. Total energy = 3314.9127 kcal/mol (3309.6754 without restraints) Performing minimization step: 4374. Total energy = 3314.8714 kcal/mol (3309.6306 without restraints) Performing minimization step: 4375. Total energy = 3314.8298 kcal/mol (3309.5944 without restraints) Performing minimization step: 4376. Total energy = 3314.7873 kcal/mol (3309.5475 without restraints) Performing minimization step: 4377. Total energy = 3314.7457 kcal/mol (3309.5107 without restraints) Performing minimization step: 4378. Total energy = 3314.7044 kcal/mol (3309.4660 without restraints) Performing minimization step: 4379. Total energy = 3314.6628 kcal/mol (3309.4297 without restraints) Performing minimization step: 4380. Total energy = 3314.6206 kcal/mol (3309.3831 without restraints) Performing minimization step: 4381. Total energy = 3314.5790 kcal/mol (3309.3463 without restraints) Performing minimization step: 4382. Total energy = 3314.5379 kcal/mol (3309.3017 without restraints) Performing minimization step: 4383. Total energy = 3314.4963 kcal/mol (3309.2654 without restraints) Performing minimization step: 4384. Total energy = 3314.4541 kcal/mol (3309.2189 without restraints) Performing minimization step: 4385. Total energy = 3314.4125 kcal/mol (3309.1821 without restraints) Performing minimization step: 4386. Total energy = 3314.3715 kcal/mol (3309.1376 without restraints) Performing minimization step: 4387. Total energy = 3314.3299 kcal/mol (3309.1014 without restraints) Performing minimization step: 4388. Total energy = 3314.2881 kcal/mol (3309.0552 without restraints) Performing minimization step: 4389. Total energy = 3314.2466 kcal/mol (3309.0185 without restraints) Performing minimization step: 4390. Total energy = 3314.2055 kcal/mol (3308.9739 without restraints) Performing minimization step: 4391. Total energy = 3314.1641 kcal/mol (3308.9376 without restraints) Performing minimization step: 4392. Total energy = 3314.1223 kcal/mol (3308.8918 without restraints) Performing minimization step: 4393. Total energy = 3314.0804 kcal/mol (3308.8546 without restraints) Performing minimization step: 4394. Total energy = 3314.0393 kcal/mol (3308.8098 without restraints) Performing minimization step: 4395. Total energy = 3313.9978 kcal/mol (3308.7731 without restraints) Performing minimization step: 4396. Total energy = 3313.9571 kcal/mol (3308.7289 without restraints) Performing minimization step: 4397. Total energy = 3313.9158 kcal/mol (3308.6928 without restraints) Performing minimization step: 4398. Total energy = 3313.8741 kcal/mol (3308.6471 without restraints) Performing minimization step: 4399. Total energy = 3313.8325 kcal/mol (3308.6102 without restraints) Performing minimization step: 4400. Total energy = 3313.7916 kcal/mol (3308.5655 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e0aaf9ce/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 4401. Total energy = 3313.7500 kcal/mol (3308.5288 without restraints) Performing minimization step: 4402. Total energy = 3313.7090 kcal/mol (3308.4841 without restraints) Performing minimization step: 4403. Total energy = 3313.6671 kcal/mol (3308.4471 without restraints) Performing minimization step: 4404. Total energy = 3313.6261 kcal/mol (3308.4024 without restraints) Performing minimization step: 4405. Total energy = 3313.5847 kcal/mol (3308.3658 without restraints) Performing minimization step: 4406. Total energy = 3313.5436 kcal/mol (3308.3209 without restraints) Performing minimization step: 4407. Total energy = 3313.4976 kcal/mol (3308.2750 without restraints) Performing minimization step: 4408. Total energy = 3313.4592 kcal/mol (3308.2339 without restraints) Performing minimization step: 4409. Total energy = 3313.4170 kcal/mol (3308.1965 without restraints) Performing minimization step: 4410. Total energy = 3313.3757 kcal/mol (3308.1514 without restraints) Performing minimization step: 4411. Total energy = 3313.3353 kcal/mol (3308.1162 without restraints) Performing minimization step: 4412. Total energy = 3313.2931 kcal/mol (3308.0699 without restraints) Performing minimization step: 4413. Total energy = 3313.2529 kcal/mol (3308.0350 without restraints) Performing minimization step: 4414. Total energy = 3313.2106 kcal/mol (3307.9885 without restraints) Performing minimization step: 4415. Total energy = 3313.1711 kcal/mol (3307.9544 without restraints) Performing minimization step: 4416. Total energy = 3313.1288 kcal/mol (3307.9079 without restraints) Performing minimization step: 4417. Total energy = 3313.0892 kcal/mol (3307.8736 without restraints) Performing minimization step: 4418. Total energy = 3313.0471 kcal/mol (3307.8273 without restraints) Performing minimization step: 4419. Total energy = 3313.0076 kcal/mol (3307.7931 without restraints) Performing minimization step: 4420. Total energy = 3312.9652 kcal/mol (3307.7464 without restraints) Performing minimization step: 4421. Total energy = 3312.9249 kcal/mol (3307.7115 without restraints) Performing minimization step: 4422. Total energy = 3312.8827 kcal/mol (3307.6652 without restraints) Performing minimization step: 4423. Total energy = 3312.8432 kcal/mol (3307.6310 without restraints) Performing minimization step: 4424. Total energy = 3312.8004 kcal/mol (3307.5839 without restraints) Performing minimization step: 4425. Total energy = 3312.7608 kcal/mol (3307.5497 without restraints) Performing minimization step: 4426. Total energy = 3312.7186 kcal/mol (3307.5034 without restraints) Performing minimization step: 4427. Total energy = 3312.6792 kcal/mol (3307.4693 without restraints) Performing minimization step: 4428. Total energy = 3312.6372 kcal/mol (3307.4231 without restraints) Performing minimization step: 4429. Total energy = 3312.5980 kcal/mol (3307.3893 without restraints) Performing minimization step: 4430. Total energy = 3312.5560 kcal/mol (3307.3430 without restraints) Performing minimization step: 4431. Total energy = 3312.5166 kcal/mol (3307.3090 without restraints) Performing minimization step: 4432. Total energy = 3312.4744 kcal/mol (3307.2625 without restraints) Performing minimization step: 4433. Total energy = 3312.4348 kcal/mol (3307.2283 without restraints) Performing minimization step: 4434. Total energy = 3312.3928 kcal/mol (3307.1821 without restraints) Performing minimization step: 4435. Total energy = 3312.3535 kcal/mol (3307.1481 without restraints) Performing minimization step: 4436. Total energy = 3312.3116 kcal/mol (3307.1020 without restraints) Performing minimization step: 4437. Total energy = 3312.2721 kcal/mol (3307.0679 without restraints) Performing minimization step: 4438. Total energy = 3312.2302 kcal/mol (3307.0217 without restraints) Performing minimization step: 4439. Total energy = 3312.1915 kcal/mol (3306.9883 without restraints) Performing minimization step: 4440. Total energy = 3312.1495 kcal/mol (3306.9422 without restraints) Performing minimization step: 4441. Total energy = 3312.1103 kcal/mol (3306.9083 without restraints) Performing minimization step: 4442. Total energy = 3312.0685 kcal/mol (3306.8623 without restraints) Performing minimization step: 4443. Total energy = 3312.0296 kcal/mol (3306.8286 without restraints) Performing minimization step: 4444. Total energy = 3311.9910 kcal/mol (3306.7889 without restraints) Performing minimization step: 4445. Total energy = 3311.9490 kcal/mol (3306.7516 without restraints) Performing minimization step: 4446. Total energy = 3311.9088 kcal/mol (3306.7075 without restraints) Performing minimization step: 4447. Total energy = 3311.8685 kcal/mol (3306.6725 without restraints) Performing minimization step: 4448. Total energy = 3311.8271 kcal/mol (3306.6268 without restraints) Performing minimization step: 4449. Total energy = 3311.7843 kcal/mol (3306.5860 without restraints) Performing minimization step: 4450. Total energy = 3311.7451 kcal/mol (3306.5436 without restraints) Performing minimization step: 4451. Total energy = 3311.7046 kcal/mol (3306.5080 without restraints) Performing minimization step: 4452. Total energy = 3311.6637 kcal/mol (3306.4631 without restraints) Performing minimization step: 4453. Total energy = 3311.6242 kcal/mol (3306.4289 without restraints) Performing minimization step: 4454. Total energy = 3311.5827 kcal/mol (3306.3833 without restraints) Performing minimization step: 4455. Total energy = 3311.5437 kcal/mol (3306.3495 without restraints) Performing minimization step: 4456. Total energy = 3311.5021 kcal/mol (3306.3037 without restraints) Performing minimization step: 4457. Total energy = 3311.4629 kcal/mol (3306.2698 without restraints) Performing minimization step: 4458. Total energy = 3311.4213 kcal/mol (3306.2240 without restraints) Performing minimization step: 4459. Total energy = 3311.3823 kcal/mol (3306.1904 without restraints) Performing minimization step: 4460. Total energy = 3311.3407 kcal/mol (3306.1446 without restraints) Performing minimization step: 4461. Total energy = 3311.3019 kcal/mol (3306.1110 without restraints) Performing minimization step: 4462. Total energy = 3311.2604 kcal/mol (3306.0654 without restraints) Performing minimization step: 4463. Total energy = 3311.2218 kcal/mol (3306.0323 without restraints) Performing minimization step: 4464. Total energy = 3311.1805 kcal/mol (3305.9866 without restraints) Performing minimization step: 4465. Total energy = 3311.1417 kcal/mol (3305.9531 without restraints) Performing minimization step: 4466. Total energy = 3311.1001 kcal/mol (3305.9072 without restraints) Performing minimization step: 4467. Total energy = 3311.0615 kcal/mol (3305.8742 without restraints) Performing minimization step: 4468. Total energy = 3311.0202 kcal/mol (3305.8285 without restraints) Performing minimization step: 4469. Total energy = 3310.9813 kcal/mol (3305.7949 without restraints) Performing minimization step: 4470. Total energy = 3310.9398 kcal/mol (3305.7492 without restraints) Performing minimization step: 4471. Total energy = 3310.9010 kcal/mol (3305.7157 without restraints) Performing minimization step: 4472. Total energy = 3310.8596 kcal/mol (3305.6703 without restraints) Performing minimization step: 4473. Total energy = 3310.8211 kcal/mol (3305.6369 without restraints) Performing minimization step: 4474. Total energy = 3310.7795 kcal/mol (3305.5911 without restraints) Performing minimization step: 4475. Total energy = 3310.7409 kcal/mol (3305.5578 without restraints) Performing minimization step: 4476. Total energy = 3310.6993 kcal/mol (3305.5120 without restraints) Performing minimization step: 4477. Total energy = 3310.6609 kcal/mol (3305.4790 without restraints) Performing minimization step: 4478. Total energy = 3310.6194 kcal/mol (3305.4332 without restraints) Performing minimization step: 4479. Total energy = 3310.5808 kcal/mol (3305.4000 without restraints) Performing minimization step: 4480. Total energy = 3310.5397 kcal/mol (3305.3549 without restraints) Performing minimization step: 4481. Total energy = 3310.5014 kcal/mol (3305.3217 without restraints) Performing minimization step: 4482. Total energy = 3310.4602 kcal/mol (3305.2762 without restraints) Performing minimization step: 4483. Total energy = 3310.4216 kcal/mol (3305.2430 without restraints) Performing minimization step: 4484. Total energy = 3310.3804 kcal/mol (3305.1975 without restraints) Performing minimization step: 4485. Total energy = 3310.3419 kcal/mol (3305.1643 without restraints) Performing minimization step: 4486. Total energy = 3310.3007 kcal/mol (3305.1189 without restraints) Performing minimization step: 4487. Total energy = 3310.2560 kcal/mol (3305.0726 without restraints) Performing minimization step: 4488. Total energy = 3310.2181 kcal/mol (3305.0317 without restraints) Performing minimization step: 4489. Total energy = 3310.1780 kcal/mol (3304.9963 without restraints) Performing minimization step: 4490. Total energy = 3310.1433 kcal/mol (3304.9637 without restraints) Performing minimization step: 4491. Total energy = 3310.0985 kcal/mol (3304.9235 without restraints) Performing minimization step: 4492. Total energy = 3310.0602 kcal/mol (3304.8820 without restraints) Performing minimization step: 4493. Total energy = 3310.0204 kcal/mol (3304.8471 without restraints) Performing minimization step: 4494. Total energy = 3309.9798 kcal/mol (3304.8026 without restraints) Performing minimization step: 4495. Total energy = 3309.9410 kcal/mol (3304.7690 without restraints) Performing minimization step: 4496. Total energy = 3309.8999 kcal/mol (3304.7237 without restraints) Performing minimization step: 4497. Total energy = 3309.8615 kcal/mol (3304.6906 without restraints) Performing minimization step: 4498. Total energy = 3309.8205 kcal/mol (3304.6453 without restraints) Performing minimization step: 4499. Total energy = 3309.7821 kcal/mol (3304.6123 without restraints) Performing minimization step: 4500. Total energy = 3309.7414 kcal/mol (3304.5673 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e0aaf9ce/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 4501. Total energy = 3309.7031 kcal/mol (3304.5344 without restraints) Performing minimization step: 4502. Total energy = 3309.6622 kcal/mol (3304.4893 without restraints) Performing minimization step: 4503. Total energy = 3309.6240 kcal/mol (3304.4564 without restraints) Performing minimization step: 4504. Total energy = 3309.5881 kcal/mol (3304.4211 without restraints) Performing minimization step: 4505. Total energy = 3309.5455 kcal/mol (3304.3828 without restraints) Performing minimization step: 4506. Total energy = 3309.5048 kcal/mol (3304.3365 without restraints) Performing minimization step: 4507. Total energy = 3309.4639 kcal/mol (3304.2978 without restraints) Performing minimization step: 4508. Total energy = 3309.4254 kcal/mol (3304.2560 without restraints) Performing minimization step: 4509. Total energy = 3309.3860 kcal/mol (3304.2215 without restraints) Performing minimization step: 4510. Total energy = 3309.3457 kcal/mol (3304.1772 without restraints) Performing minimization step: 4511. Total energy = 3309.3071 kcal/mol (3304.1437 without restraints) Performing minimization step: 4512. Total energy = 3309.2665 kcal/mol (3304.0991 without restraints) Performing minimization step: 4513. Total energy = 3309.2283 kcal/mol (3304.0661 without restraints) Performing minimization step: 4514. Total energy = 3309.1876 kcal/mol (3304.0212 without restraints) Performing minimization step: 4515. Total energy = 3309.1496 kcal/mol (3303.9885 without restraints) Performing minimization step: 4516. Total energy = 3309.1088 kcal/mol (3303.9435 without restraints) Performing minimization step: 4517. Total energy = 3309.0709 kcal/mol (3303.9109 without restraints) Performing minimization step: 4518. Total energy = 3309.0299 kcal/mol (3303.8656 without restraints) Performing minimization step: 4519. Total energy = 3308.9919 kcal/mol (3303.8329 without restraints) Performing minimization step: 4520. Total energy = 3308.9511 kcal/mol (3303.7882 without restraints) Performing minimization step: 4521. Total energy = 3308.9134 kcal/mol (3303.7556 without restraints) Performing minimization step: 4522. Total energy = 3308.8726 kcal/mol (3303.7106 without restraints) Performing minimization step: 4523. Total energy = 3308.8364 kcal/mol (3303.6780 without restraints) Performing minimization step: 4524. Total energy = 3308.7978 kcal/mol (3303.6329 without restraints) Performing minimization step: 4525. Total energy = 3308.7565 kcal/mol (3303.6008 without restraints) Performing minimization step: 4526. Total energy = 3308.7159 kcal/mol (3303.5561 without restraints) Performing minimization step: 4527. Total energy = 3308.6781 kcal/mol (3303.5236 without restraints) Performing minimization step: 4528. Total energy = 3308.6376 kcal/mol (3303.4788 without restraints) Performing minimization step: 4529. Total energy = 3308.6000 kcal/mol (3303.4465 without restraints) Performing minimization step: 4530. Total energy = 3308.5594 kcal/mol (3303.4017 without restraints) Performing minimization step: 4531. Total energy = 3308.5216 kcal/mol (3303.3692 without restraints) Performing minimization step: 4532. Total energy = 3308.4810 kcal/mol (3303.3243 without restraints) Performing minimization step: 4533. Total energy = 3308.4430 kcal/mol (3303.2917 without restraints) Performing minimization step: 4534. Total energy = 3308.4026 kcal/mol (3303.2470 without restraints) Performing minimization step: 4535. Total energy = 3308.3652 kcal/mol (3303.2149 without restraints) Performing minimization step: 4536. Total energy = 3308.3250 kcal/mol (3303.1705 without restraints) Performing minimization step: 4537. Total energy = 3308.2874 kcal/mol (3303.1382 without restraints) Performing minimization step: 4538. Total energy = 3308.2470 kcal/mol (3303.0936 without restraints) Performing minimization step: 4539. Total energy = 3308.2094 kcal/mol (3303.0614 without restraints) Performing minimization step: 4540. Total energy = 3308.1689 kcal/mol (3303.0166 without restraints) Performing minimization step: 4541. Total energy = 3308.1310 kcal/mol (3302.9840 without restraints) Performing minimization step: 4542. Total energy = 3308.0905 kcal/mol (3302.9392 without restraints) Performing minimization step: 4543. Total energy = 3308.0529 kcal/mol (3302.9069 without restraints) Performing minimization step: 4544. Total energy = 3308.0128 kcal/mol (3302.8627 without restraints) Performing minimization step: 4545. Total energy = 3307.9753 kcal/mol (3302.8305 without restraints) Performing minimization step: 4546. Total energy = 3307.9351 kcal/mol (3302.7860 without restraints) Performing minimization step: 4547. Total energy = 3307.8973 kcal/mol (3302.7534 without restraints) Performing minimization step: 4548. Total energy = 3307.8572 kcal/mol (3302.7092 without restraints) Performing minimization step: 4549. Total energy = 3307.8201 kcal/mol (3302.6776 without restraints) Performing minimization step: 4550. Total energy = 3307.7802 kcal/mol (3302.6332 without restraints) Performing minimization step: 4551. Total energy = 3307.7430 kcal/mol (3302.6013 without restraints) Performing minimization step: 4552. Total energy = 3307.7031 kcal/mol (3302.5572 without restraints) Performing minimization step: 4553. Total energy = 3307.6657 kcal/mol (3302.5252 without restraints) Performing minimization step: 4554. Total energy = 3307.6256 kcal/mol (3302.4808 without restraints) Performing minimization step: 4555. Total energy = 3307.5883 kcal/mol (3302.4487 without restraints) Performing minimization step: 4556. Total energy = 3307.5480 kcal/mol (3302.4042 without restraints) Performing minimization step: 4557. Total energy = 3307.5107 kcal/mol (3302.3722 without restraints) Performing minimization step: 4558. Total energy = 3307.4706 kcal/mol (3302.3279 without restraints) Performing minimization step: 4559. Total energy = 3307.4331 kcal/mol (3302.2957 without restraints) Performing minimization step: 4560. Total energy = 3307.3930 kcal/mol (3302.2514 without restraints) Performing minimization step: 4561. Total energy = 3307.3556 kcal/mol (3302.2192 without restraints) Performing minimization step: 4562. Total energy = 3307.3156 kcal/mol (3302.1750 without restraints) Performing minimization step: 4563. Total energy = 3307.2783 kcal/mol (3302.1430 without restraints) Performing minimization step: 4564. Total energy = 3307.2382 kcal/mol (3302.0986 without restraints) Performing minimization step: 4565. Total energy = 3307.2009 kcal/mol (3302.0667 without restraints) Performing minimization step: 4566. Total energy = 3307.1610 kcal/mol (3302.0227 without restraints) Performing minimization step: 4567. Total energy = 3307.1235 kcal/mol (3301.9904 without restraints) Performing minimization step: 4568. Total energy = 3307.0840 kcal/mol (3301.9466 without restraints) Performing minimization step: 4569. Total energy = 3307.0405 kcal/mol (3301.9010 without restraints) Performing minimization step: 4570. Total energy = 3307.0038 kcal/mol (3301.8617 without restraints) Performing minimization step: 4571. Total energy = 3306.9648 kcal/mol (3301.8274 without restraints) Performing minimization step: 4572. Total energy = 3306.9254 kcal/mol (3301.7849 without restraints) Performing minimization step: 4573. Total energy = 3306.8883 kcal/mol (3301.7520 without restraints) Performing minimization step: 4574. Total energy = 3306.8488 kcal/mol (3301.7094 without restraints) Performing minimization step: 4575. Total energy = 3306.8115 kcal/mol (3301.6762 without restraints) Performing minimization step: 4576. Total energy = 3306.7723 kcal/mol (3301.6339 without restraints) Performing minimization step: 4577. Total energy = 3306.7352 kcal/mol (3301.6009 without restraints) Performing minimization step: 4578. Total energy = 3306.6958 kcal/mol (3301.5584 without restraints) Performing minimization step: 4579. Total energy = 3306.6591 kcal/mol (3301.5258 without restraints) Performing minimization step: 4580. Total energy = 3306.6195 kcal/mol (3301.4831 without restraints) Performing minimization step: 4581. Total energy = 3306.5824 kcal/mol (3301.4503 without restraints) Performing minimization step: 4582. Total energy = 3306.5429 kcal/mol (3301.4076 without restraints) Performing minimization step: 4583. Total energy = 3306.5061 kcal/mol (3301.3750 without restraints) Performing minimization step: 4584. Total energy = 3306.4666 kcal/mol (3301.3323 without restraints) Performing minimization step: 4585. Total energy = 3306.4296 kcal/mol (3301.2995 without restraints) Performing minimization step: 4586. Total energy = 3306.3901 kcal/mol (3301.2569 without restraints) Performing minimization step: 4587. Total energy = 3306.3533 kcal/mol (3301.2243 without restraints) Performing minimization step: 4588. Total energy = 3306.3140 kcal/mol (3301.1818 without restraints) Performing minimization step: 4589. Total energy = 3306.2767 kcal/mol (3301.1486 without restraints) Performing minimization step: 4590. Total energy = 3306.2373 kcal/mol (3301.1063 without restraints) Performing minimization step: 4591. Total energy = 3306.2006 kcal/mol (3301.0739 without restraints) Performing minimization step: 4592. Total energy = 3306.1610 kcal/mol (3301.0309 without restraints) Performing minimization step: 4593. Total energy = 3306.1241 kcal/mol (3300.9982 without restraints) Performing minimization step: 4594. Total energy = 3306.0850 kcal/mol (3300.9559 without restraints) Performing minimization step: 4595. Total energy = 3306.0481 kcal/mol (3300.9233 without restraints) Performing minimization step: 4596. Total energy = 3306.0090 kcal/mol (3300.8810 without restraints) Performing minimization step: 4597. Total energy = 3305.9720 kcal/mol (3300.8481 without restraints) Performing minimization step: 4598. Total energy = 3305.9326 kcal/mol (3300.8056 without restraints) Performing minimization step: 4599. Total energy = 3305.8960 kcal/mol (3300.7733 without restraints) Performing minimization step: 4600. Total energy = 3305.8568 kcal/mol (3300.7310 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e0aaf9ce/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 4601. Total energy = 3305.8201 kcal/mol (3300.6986 without restraints) Performing minimization step: 4602. Total energy = 3305.7811 kcal/mol (3300.6562 without restraints) Performing minimization step: 4603. Total energy = 3305.7441 kcal/mol (3300.6234 without restraints) Performing minimization step: 4604. Total energy = 3305.7048 kcal/mol (3300.5809 without restraints) Performing minimization step: 4605. Total energy = 3305.6679 kcal/mol (3300.5482 without restraints) Performing minimization step: 4606. Total energy = 3305.6287 kcal/mol (3300.5059 without restraints) Performing minimization step: 4607. Total energy = 3305.5920 kcal/mol (3300.4734 without restraints) Performing minimization step: 4608. Total energy = 3305.5526 kcal/mol (3300.4309 without restraints) Performing minimization step: 4609. Total energy = 3305.5159 kcal/mol (3300.3983 without restraints) Performing minimization step: 4610. Total energy = 3305.4767 kcal/mol (3300.3560 without restraints) Performing minimization step: 4611. Total energy = 3305.4401 kcal/mol (3300.3236 without restraints) Performing minimization step: 4612. Total energy = 3305.4007 kcal/mol (3300.2810 without restraints) Performing minimization step: 4613. Total energy = 3305.3641 kcal/mol (3300.2486 without restraints) Performing minimization step: 4614. Total energy = 3305.3252 kcal/mol (3300.2066 without restraints) Performing minimization step: 4615. Total energy = 3305.2886 kcal/mol (3300.1741 without restraints) Performing minimization step: 4616. Total energy = 3305.2495 kcal/mol (3300.1319 without restraints) Performing minimization step: 4617. Total energy = 3305.2130 kcal/mol (3300.0996 without restraints) Performing minimization step: 4618. Total energy = 3305.1740 kcal/mol (3300.0574 without restraints) Performing minimization step: 4619. Total energy = 3305.1375 kcal/mol (3300.0252 without restraints) Performing minimization step: 4620. Total energy = 3305.0985 kcal/mol (3299.9830 without restraints) Performing minimization step: 4621. Total energy = 3305.0621 kcal/mol (3299.9507 without restraints) Performing minimization step: 4622. Total energy = 3305.0229 kcal/mol (3299.9084 without restraints) Performing minimization step: 4623. Total energy = 3304.9863 kcal/mol (3299.8759 without restraints) Performing minimization step: 4624. Total energy = 3304.9473 kcal/mol (3299.8338 without restraints) Performing minimization step: 4625. Total energy = 3304.9107 kcal/mol (3299.8014 without restraints) Performing minimization step: 4626. Total energy = 3304.8720 kcal/mol (3299.7596 without restraints) Performing minimization step: 4627. Total energy = 3304.8360 kcal/mol (3299.7277 without restraints) Performing minimization step: 4628. Total energy = 3304.7971 kcal/mol (3299.6857 without restraints) Performing minimization step: 4629. Total energy = 3304.7608 kcal/mol (3299.6536 without restraints) Performing minimization step: 4630. Total energy = 3304.7221 kcal/mol (3299.6117 without restraints) Performing minimization step: 4631. Total energy = 3304.6857 kcal/mol (3299.5795 without restraints) Performing minimization step: 4632. Total energy = 3304.6469 kcal/mol (3299.5376 without restraints) Performing minimization step: 4633. Total energy = 3304.6104 kcal/mol (3299.5052 without restraints) Performing minimization step: 4634. Total energy = 3304.5716 kcal/mol (3299.4632 without restraints) Performing minimization step: 4635. Total energy = 3304.5353 kcal/mol (3299.4312 without restraints) Performing minimization step: 4636. Total energy = 3304.4963 kcal/mol (3299.3890 without restraints) Performing minimization step: 4637. Total energy = 3304.4601 kcal/mol (3299.3570 without restraints) Performing minimization step: 4638. Total energy = 3304.4214 kcal/mol (3299.3151 without restraints) Performing minimization step: 4639. Total energy = 3304.3852 kcal/mol (3299.2831 without restraints) Performing minimization step: 4640. Total energy = 3304.3465 kcal/mol (3299.2413 without restraints) Performing minimization step: 4641. Total energy = 3304.3104 kcal/mol (3299.2093 without restraints) Performing minimization step: 4642. Total energy = 3304.2720 kcal/mol (3299.1677 without restraints) Performing minimization step: 4643. Total energy = 3304.2358 kcal/mol (3299.1358 without restraints) Performing minimization step: 4644. Total energy = 3304.1972 kcal/mol (3299.0940 without restraints) Performing minimization step: 4645. Total energy = 3304.1611 kcal/mol (3299.0621 without restraints) Performing minimization step: 4646. Total energy = 3304.1225 kcal/mol (3299.0203 without restraints) Performing minimization step: 4647. Total energy = 3304.0866 kcal/mol (3298.9888 without restraints) Performing minimization step: 4648. Total energy = 3304.0483 kcal/mol (3298.9471 without restraints) Performing minimization step: 4649. Total energy = 3304.0120 kcal/mol (3298.9149 without restraints) Performing minimization step: 4650. Total energy = 3303.9736 kcal/mol (3298.8734 without restraints) Performing minimization step: 4651. Total energy = 3303.9377 kcal/mol (3298.8418 without restraints) Performing minimization step: 4652. Total energy = 3303.8992 kcal/mol (3298.8000 without restraints) Performing minimization step: 4653. Total energy = 3303.8630 kcal/mol (3298.7680 without restraints) Performing minimization step: 4654. Total energy = 3303.8244 kcal/mol (3298.7263 without restraints) Performing minimization step: 4655. Total energy = 3303.7886 kcal/mol (3298.6947 without restraints) Performing minimization step: 4656. Total energy = 3303.7501 kcal/mol (3298.6530 without restraints) Performing minimization step: 4657. Total energy = 3303.7142 kcal/mol (3298.6214 without restraints) Performing minimization step: 4658. Total energy = 3303.6756 kcal/mol (3298.5795 without restraints) Performing minimization step: 4659. Total energy = 3303.6396 kcal/mol (3298.5478 without restraints) Performing minimization step: 4660. Total energy = 3303.6013 kcal/mol (3298.5062 without restraints) Performing minimization step: 4661. Total energy = 3303.5652 kcal/mol (3298.4743 without restraints) Performing minimization step: 4662. Total energy = 3303.5266 kcal/mol (3298.4326 without restraints) Performing minimization step: 4663. Total energy = 3303.4908 kcal/mol (3298.4010 without restraints) Performing minimization step: 4664. Total energy = 3303.4524 kcal/mol (3298.3592 without restraints) Performing minimization step: 4665. Total energy = 3303.4164 kcal/mol (3298.3276 without restraints) Performing minimization step: 4666. Total energy = 3303.3782 kcal/mol (3298.2861 without restraints) Performing minimization step: 4667. Total energy = 3303.3423 kcal/mol (3298.2545 without restraints) Performing minimization step: 4668. Total energy = 3303.3040 kcal/mol (3298.2130 without restraints) Performing minimization step: 4669. Total energy = 3303.2682 kcal/mol (3298.1814 without restraints) Performing minimization step: 4670. Total energy = 3303.2300 kcal/mol (3298.1399 without restraints) Performing minimization step: 4671. Total energy = 3303.1942 kcal/mol (3298.1084 without restraints) Performing minimization step: 4672. Total energy = 3303.1560 kcal/mol (3298.0670 without restraints) Performing minimization step: 4673. Total energy = 3303.1203 kcal/mol (3298.0355 without restraints) Performing minimization step: 4674. Total energy = 3303.0821 kcal/mol (3297.9941 without restraints) Performing minimization step: 4675. Total energy = 3303.0464 kcal/mol (3297.9626 without restraints) Performing minimization step: 4676. Total energy = 3303.0085 kcal/mol (3297.9215 without restraints) Performing minimization step: 4677. Total energy = 3302.9728 kcal/mol (3297.8900 without restraints) Performing minimization step: 4678. Total energy = 3302.9347 kcal/mol (3297.8487 without restraints) Performing minimization step: 4679. Total energy = 3302.8993 kcal/mol (3297.8175 without restraints) Performing minimization step: 4680. Total energy = 3302.8613 kcal/mol (3297.7764 without restraints) Performing minimization step: 4681. Total energy = 3302.8257 kcal/mol (3297.7450 without restraints) Performing minimization step: 4682. Total energy = 3302.7873 kcal/mol (3297.7033 without restraints) Performing minimization step: 4683. Total energy = 3302.7519 kcal/mol (3297.6721 without restraints) Performing minimization step: 4684. Total energy = 3302.7139 kcal/mol (3297.6308 without restraints) Performing minimization step: 4685. Total energy = 3302.6782 kcal/mol (3297.5995 without restraints) Performing minimization step: 4686. Total energy = 3302.6402 kcal/mol (3297.5582 without restraints) Performing minimization step: 4687. Total energy = 3302.6044 kcal/mol (3297.5267 without restraints) Performing minimization step: 4688. Total energy = 3302.5665 kcal/mol (3297.4855 without restraints) Performing minimization step: 4689. Total energy = 3302.5308 kcal/mol (3297.4540 without restraints) Performing minimization step: 4690. Total energy = 3302.4928 kcal/mol (3297.4127 without restraints) Performing minimization step: 4691. Total energy = 3302.4572 kcal/mol (3297.3815 without restraints) Performing minimization step: 4692. Total energy = 3302.4195 kcal/mol (3297.3405 without restraints) Performing minimization step: 4693. Total energy = 3302.3841 kcal/mol (3297.3093 without restraints) Performing minimization step: 4694. Total energy = 3302.3462 kcal/mol (3297.2682 without restraints) Performing minimization step: 4695. Total energy = 3302.3113 kcal/mol (3297.2375 without restraints) Performing minimization step: 4696. Total energy = 3302.2735 kcal/mol (3297.1967 without restraints) Performing minimization step: 4697. Total energy = 3302.2383 kcal/mol (3297.1657 without restraints) Performing minimization step: 4698. Total energy = 3302.2005 kcal/mol (3297.1245 without restraints) Performing minimization step: 4699. Total energy = 3302.1652 kcal/mol (3297.0934 without restraints) Performing minimization step: 4700. Total energy = 3302.1274 kcal/mol (3297.0524 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e0aaf9ce/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 4701. Total energy = 3302.0923 kcal/mol (3297.0215 without restraints) Performing minimization step: 4702. Total energy = 3302.0545 kcal/mol (3296.9805 without restraints) Performing minimization step: 4703. Total energy = 3302.0191 kcal/mol (3296.9492 without restraints) Performing minimization step: 4704. Total energy = 3301.9812 kcal/mol (3296.9082 without restraints) Performing minimization step: 4705. Total energy = 3301.9455 kcal/mol (3296.8767 without restraints) Performing minimization step: 4706. Total energy = 3301.9080 kcal/mol (3296.8360 without restraints) Performing minimization step: 4707. Total energy = 3301.8726 kcal/mol (3296.8046 without restraints) Performing minimization step: 4708. Total energy = 3301.8345 kcal/mol (3296.7635 without restraints) Performing minimization step: 4709. Total energy = 3301.7992 kcal/mol (3296.7324 without restraints) Performing minimization step: 4710. Total energy = 3301.7614 kcal/mol (3296.6915 without restraints) Performing minimization step: 4711. Total energy = 3301.7259 kcal/mol (3296.6601 without restraints) Performing minimization step: 4712. Total energy = 3301.6883 kcal/mol (3296.6193 without restraints) Performing minimization step: 4713. Total energy = 3301.6531 kcal/mol (3296.5883 without restraints) Performing minimization step: 4714. Total energy = 3301.6155 kcal/mol (3296.5475 without restraints) Performing minimization step: 4715. Total energy = 3301.5801 kcal/mol (3296.5163 without restraints) Performing minimization step: 4716. Total energy = 3301.5427 kcal/mol (3296.4756 without restraints) Performing minimization step: 4717. Total energy = 3301.5076 kcal/mol (3296.4448 without restraints) Performing minimization step: 4718. Total energy = 3301.4702 kcal/mol (3296.4041 without restraints) Performing minimization step: 4719. Total energy = 3301.4351 kcal/mol (3296.3732 without restraints) Performing minimization step: 4720. Total energy = 3301.3976 kcal/mol (3296.3325 without restraints) Performing minimization step: 4721. Total energy = 3301.3625 kcal/mol (3296.3017 without restraints) Performing minimization step: 4722. Total energy = 3301.3250 kcal/mol (3296.2609 without restraints) Performing minimization step: 4723. Total energy = 3301.2900 kcal/mol (3296.2302 without restraints) Performing minimization step: 4724. Total energy = 3301.2527 kcal/mol (3296.1894 without restraints) Performing minimization step: 4725. Total energy = 3301.2176 kcal/mol (3296.1587 without restraints) Performing minimization step: 4726. Total energy = 3301.1799 kcal/mol (3296.1178 without restraints) Performing minimization step: 4727. Total energy = 3301.1449 kcal/mol (3296.0870 without restraints) Performing minimization step: 4728. Total energy = 3301.1075 kcal/mol (3296.0463 without restraints) Performing minimization step: 4729. Total energy = 3301.0724 kcal/mol (3296.0154 without restraints) Performing minimization step: 4730. Total energy = 3301.0350 kcal/mol (3295.9748 without restraints) Performing minimization step: 4731. Total energy = 3301.0000 kcal/mol (3295.9441 without restraints) Performing minimization step: 4732. Total energy = 3300.9623 kcal/mol (3295.9031 without restraints) Performing minimization step: 4733. Total energy = 3300.9275 kcal/mol (3295.8726 without restraints) Performing minimization step: 4734. Total energy = 3300.8904 kcal/mol (3295.8323 without restraints) Performing minimization step: 4735. Total energy = 3300.8556 kcal/mol (3295.8016 without restraints) Performing minimization step: 4736. Total energy = 3300.8183 kcal/mol (3295.7610 without restraints) Performing minimization step: 4737. Total energy = 3300.7835 kcal/mol (3295.7304 without restraints) Performing minimization step: 4738. Total energy = 3300.7462 kcal/mol (3295.6899 without restraints) Performing minimization step: 4739. Total energy = 3300.7114 kcal/mol (3295.6593 without restraints) Performing minimization step: 4740. Total energy = 3300.6741 kcal/mol (3295.6188 without restraints) Performing minimization step: 4741. Total energy = 3300.6393 kcal/mol (3295.5882 without restraints) Performing minimization step: 4742. Total energy = 3300.6018 kcal/mol (3295.5475 without restraints) Performing minimization step: 4743. Total energy = 3300.5671 kcal/mol (3295.5170 without restraints) Performing minimization step: 4744. Total energy = 3300.5298 kcal/mol (3295.4765 without restraints) Performing minimization step: 4745. Total energy = 3300.4951 kcal/mol (3295.4460 without restraints) Performing minimization step: 4746. Total energy = 3300.4579 kcal/mol (3295.4055 without restraints) Performing minimization step: 4747. Total energy = 3300.4227 kcal/mol (3295.3746 without restraints) Performing minimization step: 4748. Total energy = 3300.3853 kcal/mol (3295.3339 without restraints) Performing minimization step: 4749. Total energy = 3300.3507 kcal/mol (3295.3035 without restraints) Performing minimization step: 4750. Total energy = 3300.3136 kcal/mol (3295.2631 without restraints) Performing minimization step: 4751. Total energy = 3300.2789 kcal/mol (3295.2327 without restraints) Performing minimization step: 4752. Total energy = 3300.2418 kcal/mol (3295.1923 without restraints) Performing minimization step: 4753. Total energy = 3300.2071 kcal/mol (3295.1619 without restraints) Performing minimization step: 4754. Total energy = 3300.1701 kcal/mol (3295.1216 without restraints) Performing minimization step: 4755. Total energy = 3300.1355 kcal/mol (3295.0912 without restraints) Performing minimization step: 4756. Total energy = 3300.0982 kcal/mol (3295.0508 without restraints) Performing minimization step: 4757. Total energy = 3300.0637 kcal/mol (3295.0204 without restraints) Performing minimization step: 4758. Total energy = 3300.0267 kcal/mol (3294.9802 without restraints) Performing minimization step: 4759. Total energy = 3299.9922 kcal/mol (3294.9498 without restraints) Performing minimization step: 4760. Total energy = 3299.9551 kcal/mol (3294.9096 without restraints) Performing minimization step: 4761. Total energy = 3299.9207 kcal/mol (3294.8793 without restraints) Performing minimization step: 4762. Total energy = 3299.8839 kcal/mol (3294.8395 without restraints) Performing minimization step: 4763. Total energy = 3299.8498 kcal/mol (3294.8095 without restraints) Performing minimization step: 4764. Total energy = 3299.8129 kcal/mol (3294.7693 without restraints) Performing minimization step: 4765. Total energy = 3299.7785 kcal/mol (3294.7391 without restraints) Performing minimization step: 4766. Total energy = 3299.7417 kcal/mol (3294.6991 without restraints) Performing minimization step: 4767. Total energy = 3299.7078 kcal/mol (3294.6694 without restraints) Performing minimization step: 4768. Total energy = 3299.6709 kcal/mol (3294.6292 without restraints) Performing minimization step: 4769. Total energy = 3299.6366 kcal/mol (3294.5991 without restraints) Performing minimization step: 4770. Total energy = 3299.5995 kcal/mol (3294.5585 without restraints) Performing minimization step: 4771. Total energy = 3299.5649 kcal/mol (3294.5284 without restraints) Performing minimization step: 4772. Total energy = 3299.5283 kcal/mol (3294.4885 without restraints) Performing minimization step: 4773. Total energy = 3299.4940 kcal/mol (3294.4584 without restraints) Performing minimization step: 4774. Total energy = 3299.4572 kcal/mol (3294.4184 without restraints) Performing minimization step: 4775. Total energy = 3299.4229 kcal/mol (3294.3883 without restraints) Performing minimization step: 4776. Total energy = 3299.3862 kcal/mol (3294.3484 without restraints) Performing minimization step: 4777. Total energy = 3299.3520 kcal/mol (3294.3183 without restraints) Performing minimization step: 4778. Total energy = 3299.3152 kcal/mol (3294.2783 without restraints) Performing minimization step: 4779. Total energy = 3299.2809 kcal/mol (3294.2483 without restraints) Performing minimization step: 4780. Total energy = 3299.2444 kcal/mol (3294.2085 without restraints) Performing minimization step: 4781. Total energy = 3299.2102 kcal/mol (3294.1785 without restraints) Performing minimization step: 4782. Total energy = 3299.1736 kcal/mol (3294.1386 without restraints) Performing minimization step: 4783. Total energy = 3299.1396 kcal/mol (3294.1088 without restraints) Performing minimization step: 4784. Total energy = 3299.1030 kcal/mol (3294.0691 without restraints) Performing minimization step: 4785. Total energy = 3299.0689 kcal/mol (3294.0391 without restraints) Performing minimization step: 4786. Total energy = 3299.0322 kcal/mol (3293.9990 without restraints) Performing minimization step: 4787. Total energy = 3298.9979 kcal/mol (3293.9691 without restraints) Performing minimization step: 4788. Total energy = 3298.9613 kcal/mol (3293.9292 without restraints) Performing minimization step: 4789. Total energy = 3298.9273 kcal/mol (3293.8995 without restraints) Performing minimization step: 4790. Total energy = 3298.8908 kcal/mol (3293.8598 without restraints) Performing minimization step: 4791. Total energy = 3298.8569 kcal/mol (3293.8299 without restraints) Performing minimization step: 4792. Total energy = 3298.8205 kcal/mol (3293.7903 without restraints) Performing minimization step: 4793. Total energy = 3298.7866 kcal/mol (3293.7607 without restraints) Performing minimization step: 4794. Total energy = 3298.7497 kcal/mol (3293.7204 without restraints) Performing minimization step: 4795. Total energy = 3298.7158 kcal/mol (3293.6909 without restraints) Performing minimization step: 4796. Total energy = 3298.6793 kcal/mol (3293.6511 without restraints) Performing minimization step: 4797. Total energy = 3298.6449 kcal/mol (3293.6208 without restraints) Performing minimization step: 4798. Total energy = 3298.6084 kcal/mol (3293.5811 without restraints) Performing minimization step: 4799. Total energy = 3298.5744 kcal/mol (3293.5513 without restraints) Performing minimization step: 4800. Total energy = 3298.5379 kcal/mol (3293.5115 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e0aaf9ce/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 4801. Total energy = 3298.5039 kcal/mol (3293.4816 without restraints) Performing minimization step: 4802. Total energy = 3298.4674 kcal/mol (3293.4421 without restraints) Performing minimization step: 4803. Total energy = 3298.4336 kcal/mol (3293.4123 without restraints) Performing minimization step: 4804. Total energy = 3298.3969 kcal/mol (3293.3724 without restraints) Performing minimization step: 4805. Total energy = 3298.3627 kcal/mol (3293.3423 without restraints) Performing minimization step: 4806. Total energy = 3298.3262 kcal/mol (3293.3026 without restraints) Performing minimization step: 4807. Total energy = 3298.2923 kcal/mol (3293.2730 without restraints) Performing minimization step: 4808. Total energy = 3298.2559 kcal/mol (3293.2333 without restraints) Performing minimization step: 4809. Total energy = 3298.2221 kcal/mol (3293.2038 without restraints) Performing minimization step: 4810. Total energy = 3298.1860 kcal/mol (3293.1644 without restraints) Performing minimization step: 4811. Total energy = 3298.1522 kcal/mol (3293.1348 without restraints) Performing minimization step: 4812. Total energy = 3298.1162 kcal/mol (3293.0955 without restraints) Performing minimization step: 4813. Total energy = 3298.0820 kcal/mol (3293.0656 without restraints) Performing minimization step: 4814. Total energy = 3298.0457 kcal/mol (3293.0260 without restraints) Performing minimization step: 4815. Total energy = 3298.0120 kcal/mol (3292.9965 without restraints) Performing minimization step: 4816. Total energy = 3297.9757 kcal/mol (3292.9569 without restraints) Performing minimization step: 4817. Total energy = 3297.9419 kcal/mol (3292.9274 without restraints) Performing minimization step: 4818. Total energy = 3297.9057 kcal/mol (3292.8878 without restraints) Performing minimization step: 4819. Total energy = 3297.8720 kcal/mol (3292.8583 without restraints) Performing minimization step: 4820. Total energy = 3297.8357 kcal/mol (3292.8188 without restraints) Performing minimization step: 4821. Total energy = 3297.8018 kcal/mol (3292.7891 without restraints) Performing minimization step: 4822. Total energy = 3297.7656 kcal/mol (3292.7496 without restraints) Performing minimization step: 4823. Total energy = 3297.7317 kcal/mol (3292.7199 without restraints) Performing minimization step: 4824. Total energy = 3297.6955 kcal/mol (3292.6805 without restraints) Performing minimization step: 4825. Total energy = 3297.6620 kcal/mol (3292.6512 without restraints) Performing minimization step: 4826. Total energy = 3297.6258 kcal/mol (3292.6116 without restraints) Performing minimization step: 4827. Total energy = 3297.5919 kcal/mol (3292.5820 without restraints) Performing minimization step: 4828. Total energy = 3297.5557 kcal/mol (3292.5426 without restraints) Performing minimization step: 4829. Total energy = 3297.5221 kcal/mol (3292.5131 without restraints) Performing minimization step: 4830. Total energy = 3297.4860 kcal/mol (3292.4737 without restraints) Performing minimization step: 4831. Total energy = 3297.4525 kcal/mol (3292.4446 without restraints) Performing minimization step: 4832. Total energy = 3297.4165 kcal/mol (3292.4052 without restraints) Performing minimization step: 4833. Total energy = 3297.3831 kcal/mol (3292.3762 without restraints) Performing minimization step: 4834. Total energy = 3297.3475 kcal/mol (3292.3371 without restraints) Performing minimization step: 4835. Total energy = 3297.3141 kcal/mol (3292.3079 without restraints) Performing minimization step: 4836. Total energy = 3297.2778 kcal/mol (3292.2684 without restraints) Performing minimization step: 4837. Total energy = 3297.2445 kcal/mol (3292.2393 without restraints) Performing minimization step: 4838. Total energy = 3297.2086 kcal/mol (3292.2001 without restraints) Performing minimization step: 4839. Total energy = 3297.1752 kcal/mol (3292.1709 without restraints) Performing minimization step: 4840. Total energy = 3297.1392 kcal/mol (3292.1317 without restraints) Performing minimization step: 4841. Total energy = 3297.1059 kcal/mol (3292.1026 without restraints) Performing minimization step: 4842. Total energy = 3297.0697 kcal/mol (3292.0630 without restraints) Performing minimization step: 4843. Total energy = 3297.0366 kcal/mol (3292.0341 without restraints) Performing minimization step: 4844. Total energy = 3297.0006 kcal/mol (3291.9950 without restraints) Performing minimization step: 4845. Total energy = 3296.9672 kcal/mol (3291.9658 without restraints) Performing minimization step: 4846. Total energy = 3296.9314 kcal/mol (3291.9266 without restraints) Performing minimization step: 4847. Total energy = 3296.8980 kcal/mol (3291.8975 without restraints) Performing minimization step: 4848. Total energy = 3296.8622 kcal/mol (3291.8584 without restraints) Performing minimization step: 4849. Total energy = 3296.8288 kcal/mol (3291.8292 without restraints) Performing minimization step: 4850. Total energy = 3296.7930 kcal/mol (3291.7901 without restraints) Performing minimization step: 4851. Total energy = 3296.7597 kcal/mol (3291.7610 without restraints) Performing minimization step: 4852. Total energy = 3296.7240 kcal/mol (3291.7221 without restraints) Performing minimization step: 4853. Total energy = 3296.6907 kcal/mol (3291.6930 without restraints) Performing minimization step: 4854. Total energy = 3296.6549 kcal/mol (3291.6539 without restraints) Performing minimization step: 4855. Total energy = 3296.6217 kcal/mol (3291.6249 without restraints) Performing minimization step: 4856. Total energy = 3296.5861 kcal/mol (3291.5860 without restraints) Performing minimization step: 4857. Total energy = 3296.5529 kcal/mol (3291.5570 without restraints) Performing minimization step: 4858. Total energy = 3296.5171 kcal/mol (3291.5179 without restraints) Performing minimization step: 4859. Total energy = 3296.4836 kcal/mol (3291.4886 without restraints) Performing minimization step: 4860. Total energy = 3296.4480 kcal/mol (3291.4499 without restraints) Performing minimization step: 4861. Total energy = 3296.4150 kcal/mol (3291.4210 without restraints) Performing minimization step: 4862. Total energy = 3296.3793 kcal/mol (3291.3820 without restraints) Performing minimization step: 4863. Total energy = 3296.3461 kcal/mol (3291.3530 without restraints) Performing minimization step: 4864. Total energy = 3296.3106 kcal/mol (3291.3143 without restraints) Performing minimization step: 4865. Total energy = 3296.2776 kcal/mol (3291.2855 without restraints) Performing minimization step: 4866. Total energy = 3296.2421 kcal/mol (3291.2466 without restraints) Performing minimization step: 4867. Total energy = 3296.2091 kcal/mol (3291.2179 without restraints) Performing minimization step: 4868. Total energy = 3296.1736 kcal/mol (3291.1791 without restraints) Performing minimization step: 4869. Total energy = 3296.1406 kcal/mol (3291.1502 without restraints) Performing minimization step: 4870. Total energy = 3296.1050 kcal/mol (3291.1114 without restraints) Performing minimization step: 4871. Total energy = 3296.0720 kcal/mol (3291.0827 without restraints) Performing minimization step: 4872. Total energy = 3296.0370 kcal/mol (3291.0443 without restraints) Performing minimization step: 4873. Total energy = 3296.0040 kcal/mol (3291.0155 without restraints) Performing minimization step: 4874. Total energy = 3295.9685 kcal/mol (3290.9768 without restraints) Performing minimization step: 4875. Total energy = 3295.9355 kcal/mol (3290.9480 without restraints) Performing minimization step: 4876. Total energy = 3295.9004 kcal/mol (3290.9095 without restraints) Performing minimization step: 4877. Total energy = 3295.8674 kcal/mol (3290.8808 without restraints) Performing minimization step: 4878. Total energy = 3295.8319 kcal/mol (3290.8420 without restraints) Performing minimization step: 4879. Total energy = 3295.7996 kcal/mol (3290.8142 without restraints) Performing minimization step: 4880. Total energy = 3295.7647 kcal/mol (3290.7756 without restraints) Performing minimization step: 4881. Total energy = 3295.7316 kcal/mol (3290.7467 without restraints) Performing minimization step: 4882. Total energy = 3295.6962 kcal/mol (3290.7080 without restraints) Performing minimization step: 4883. Total energy = 3295.6632 kcal/mol (3290.6793 without restraints) Performing minimization step: 4884. Total energy = 3295.6277 kcal/mol (3290.6404 without restraints) Performing minimization step: 4885. Total energy = 3295.5948 kcal/mol (3290.6118 without restraints) Performing minimization step: 4886. Total energy = 3295.5593 kcal/mol (3290.5729 without restraints) Performing minimization step: 4887. Total energy = 3295.5263 kcal/mol (3290.5443 without restraints) Performing minimization step: 4888. Total energy = 3295.4910 kcal/mol (3290.5056 without restraints) Performing minimization step: 4889. Total energy = 3295.4582 kcal/mol (3290.4770 without restraints) Performing minimization step: 4890. Total energy = 3295.4228 kcal/mol (3290.4383 without restraints) Performing minimization step: 4891. Total energy = 3295.3900 kcal/mol (3290.4097 without restraints) Performing minimization step: 4892. Total energy = 3295.3547 kcal/mol (3290.3712 without restraints) Performing minimization step: 4893. Total energy = 3295.3218 kcal/mol (3290.3426 without restraints) Performing minimization step: 4894. Total energy = 3295.2867 kcal/mol (3290.3041 without restraints) Performing minimization step: 4895. Total energy = 3295.2540 kcal/mol (3290.2755 without restraints) Performing minimization step: 4896. Total energy = 3295.2187 kcal/mol (3290.2370 without restraints) Performing minimization step: 4897. Total energy = 3295.1860 kcal/mol (3290.2084 without restraints) Performing minimization step: 4898. Total energy = 3295.1507 kcal/mol (3290.1699 without restraints) Performing minimization step: 4899. Total energy = 3295.1183 kcal/mol (3290.1416 without restraints) Performing minimization step: 4900. Total energy = 3295.0830 kcal/mol (3290.1031 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e0aaf9ce/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 4901. Total energy = 3295.0502 kcal/mol (3290.0744 without restraints) Performing minimization step: 4902. Total energy = 3295.0151 kcal/mol (3290.0360 without restraints) Performing minimization step: 4903. Total energy = 3294.9823 kcal/mol (3290.0075 without restraints) Performing minimization step: 4904. Total energy = 3294.9474 kcal/mol (3289.9693 without restraints) Performing minimization step: 4905. Total energy = 3294.9146 kcal/mol (3289.9407 without restraints) Performing minimization step: 4906. Total energy = 3294.8794 kcal/mol (3289.9022 without restraints) Performing minimization step: 4907. Total energy = 3294.8468 kcal/mol (3289.8738 without restraints) Performing minimization step: 4908. Total energy = 3294.8120 kcal/mol (3289.8357 without restraints) Performing minimization step: 4909. Total energy = 3294.7794 kcal/mol (3289.8073 without restraints) Performing minimization step: 4910. Total energy = 3294.7443 kcal/mol (3289.7689 without restraints) Performing minimization step: 4911. Total energy = 3294.7118 kcal/mol (3289.7406 without restraints) Performing minimization step: 4912. Total energy = 3294.6770 kcal/mol (3289.7026 without restraints) Performing minimization step: 4913. Total energy = 3294.6445 kcal/mol (3289.6742 without restraints) Performing minimization step: 4914. Total energy = 3294.6094 kcal/mol (3289.6357 without restraints) Performing minimization step: 4915. Total energy = 3294.5768 kcal/mol (3289.6074 without restraints) Performing minimization step: 4916. Total energy = 3294.5416 kcal/mol (3289.5689 without restraints) Performing minimization step: 4917. Total energy = 3294.5090 kcal/mol (3289.5405 without restraints) Performing minimization step: 4918. Total energy = 3294.4740 kcal/mol (3289.5023 without restraints) Performing minimization step: 4919. Total energy = 3294.4414 kcal/mol (3289.4739 without restraints) Performing minimization step: 4920. Total energy = 3294.4067 kcal/mol (3289.4358 without restraints) Performing minimization step: 4921. Total energy = 3294.3743 kcal/mol (3289.4076 without restraints) Performing minimization step: 4922. Total energy = 3294.3394 kcal/mol (3289.3694 without restraints) Performing minimization step: 4923. Total energy = 3294.3070 kcal/mol (3289.3412 without restraints) Performing minimization step: 4924. Total energy = 3294.2721 kcal/mol (3289.3030 without restraints) Performing minimization step: 4925. Total energy = 3294.2398 kcal/mol (3289.2749 without restraints) Performing minimization step: 4926. Total energy = 3294.2048 kcal/mol (3289.2366 without restraints) Performing minimization step: 4927. Total energy = 3294.1723 kcal/mol (3289.2082 without restraints) Performing minimization step: 4928. Total energy = 3294.1373 kcal/mol (3289.1700 without restraints) Performing minimization step: 4929. Total energy = 3294.1048 kcal/mol (3289.1418 without restraints) Performing minimization step: 4930. Total energy = 3294.0699 kcal/mol (3289.1036 without restraints) Performing minimization step: 4931. Total energy = 3294.0376 kcal/mol (3289.0755 without restraints) Performing minimization step: 4932. Total energy = 3294.0029 kcal/mol (3289.0377 without restraints) Performing minimization step: 4933. Total energy = 3293.9711 kcal/mol (3289.0098 without restraints) Performing minimization step: 4934. Total energy = 3293.9360 kcal/mol (3288.9714 without restraints) Performing minimization step: 4935. Total energy = 3293.9034 kcal/mol (3288.9430 without restraints) Performing minimization step: 4936. Total energy = 3293.8686 kcal/mol (3288.9049 without restraints) Performing minimization step: 4937. Total energy = 3293.8361 kcal/mol (3288.8766 without restraints) Performing minimization step: 4938. Total energy = 3293.8014 kcal/mol (3288.8386 without restraints) Performing minimization step: 4939. Total energy = 3293.7692 kcal/mol (3288.8106 without restraints) Performing minimization step: 4940. Total energy = 3293.7344 kcal/mol (3288.7725 without restraints) Performing minimization step: 4941. Total energy = 3293.7024 kcal/mol (3288.7447 without restraints) Performing minimization step: 4942. Total energy = 3293.6678 kcal/mol (3288.7069 without restraints) Performing minimization step: 4943. Total energy = 3293.6355 kcal/mol (3288.6787 without restraints) Performing minimization step: 4944. Total energy = 3293.6011 kcal/mol (3288.6410 without restraints) Performing minimization step: 4945. Total energy = 3293.5688 kcal/mol (3288.6128 without restraints) Performing minimization step: 4946. Total energy = 3293.5341 kcal/mol (3288.5749 without restraints) Performing minimization step: 4947. Total energy = 3293.5020 kcal/mol (3288.5470 without restraints) Performing minimization step: 4948. Total energy = 3293.4674 kcal/mol (3288.5091 without restraints) Performing minimization step: 4949. Total energy = 3293.4353 kcal/mol (3288.4812 without restraints) Performing minimization step: 4950. Total energy = 3293.4007 kcal/mol (3288.4432 without restraints) Performing minimization step: 4951. Total energy = 3293.3686 kcal/mol (3288.4154 without restraints) Performing minimization step: 4952. Total energy = 3293.3340 kcal/mol (3288.3775 without restraints) Performing minimization step: 4953. Total energy = 3293.3018 kcal/mol (3288.3495 without restraints) Performing minimization step: 4954. Total energy = 3293.2675 kcal/mol (3288.3118 without restraints) Performing minimization step: 4955. Total energy = 3293.2355 kcal/mol (3288.2840 without restraints) Performing minimization step: 4956. Total energy = 3293.2010 kcal/mol (3288.2462 without restraints) Performing minimization step: 4957. Total energy = 3293.1690 kcal/mol (3288.2184 without restraints) Performing minimization step: 4958. Total energy = 3293.1343 kcal/mol (3288.1802 without restraints) Performing minimization step: 4959. Total energy = 3293.1023 kcal/mol (3288.1527 without restraints) Performing minimization step: 4960. Total energy = 3293.0679 kcal/mol (3288.1148 without restraints) Performing minimization step: 4961. Total energy = 3293.0362 kcal/mol (3288.0874 without restraints) Performing minimization step: 4962. Total energy = 3293.0017 kcal/mol (3288.0493 without restraints) Performing minimization step: 4963. Total energy = 3292.9695 kcal/mol (3288.0216 without restraints) Performing minimization step: 4964. Total energy = 3292.9351 kcal/mol (3287.9838 without restraints) Performing minimization step: 4965. Total energy = 3292.9034 kcal/mol (3287.9564 without restraints) Performing minimization step: 4966. Total energy = 3292.8690 kcal/mol (3287.9187 without restraints) Performing minimization step: 4967. Total energy = 3292.8372 kcal/mol (3287.8911 without restraints) Performing minimization step: 4968. Total energy = 3292.8028 kcal/mol (3287.8533 without restraints) Performing minimization step: 4969. Total energy = 3292.7711 kcal/mol (3287.8258 without restraints) Performing minimization step: 4970. Total energy = 3292.7367 kcal/mol (3287.7881 without restraints) Performing minimization step: 4971. Total energy = 3292.7049 kcal/mol (3287.7605 without restraints) Performing minimization step: 4972. Total energy = 3292.6703 kcal/mol (3287.7226 without restraints) Performing minimization step: 4973. Total energy = 3292.6386 kcal/mol (3287.6951 without restraints) Performing minimization step: 4974. Total energy = 3292.6043 kcal/mol (3287.6574 without restraints) Performing minimization step: 4975. Total energy = 3292.5723 kcal/mol (3287.6296 without restraints) Performing minimization step: 4976. Total energy = 3292.5379 kcal/mol (3287.5920 without restraints) Performing minimization step: 4977. Total energy = 3292.5062 kcal/mol (3287.5644 without restraints) Performing minimization step: 4978. Total energy = 3292.4719 kcal/mol (3287.5268 without restraints) Performing minimization step: 4979. Total energy = 3292.4402 kcal/mol (3287.4993 without restraints) Performing minimization step: 4980. Total energy = 3292.4060 kcal/mol (3287.4618 without restraints) Performing minimization step: 4981. Total energy = 3292.3743 kcal/mol (3287.4343 without restraints) Performing minimization step: 4982. Total energy = 3292.3400 kcal/mol (3287.3967 without restraints) Performing minimization step: 4983. Total energy = 3292.3084 kcal/mol (3287.3693 without restraints) Performing minimization step: 4984. Total energy = 3292.2742 kcal/mol (3287.3317 without restraints) Performing minimization step: 4985. Total energy = 3292.2422 kcal/mol (3287.3039 without restraints) Performing minimization step: 4986. Total energy = 3292.2079 kcal/mol (3287.2662 without restraints) Performing minimization step: 4987. Total energy = 3292.1761 kcal/mol (3287.2387 without restraints) Performing minimization step: 4988. Total energy = 3292.1418 kcal/mol (3287.2010 without restraints) Performing minimization step: 4989. Total energy = 3292.1103 kcal/mol (3287.1738 without restraints) Performing minimization step: 4990. Total energy = 3292.0765 kcal/mol (3287.1366 without restraints) Performing minimization step: 4991. Total energy = 3292.0449 kcal/mol (3287.1092 without restraints) Performing minimization step: 4992. Total energy = 3292.0108 kcal/mol (3287.0718 without restraints) Performing minimization step: 4993. Total energy = 3291.9793 kcal/mol (3287.0445 without restraints) Performing minimization step: 4994. Total energy = 3291.9452 kcal/mol (3287.0071 without restraints) Performing minimization step: 4995. Total energy = 3291.9137 kcal/mol (3286.9798 without restraints) Performing minimization step: 4996. Total energy = 3291.8796 kcal/mol (3286.9424 without restraints) Performing minimization step: 4997. Total energy = 3291.8481 kcal/mol (3286.9151 without restraints) Performing minimization step: 4998. Total energy = 3291.8142 kcal/mol (3286.8779 without restraints) Performing minimization step: 4999. Total energy = 3291.7828 kcal/mol (3286.8506 without restraints) Performing minimization step: 5000. Total energy = 3291.7488 kcal/mol (3286.8133 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e0aaf9ce/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. /home/ubuntu/rna-tools//opt/qrnas/ Save to ENST00000618027_refx.pdb DONE!