============================================================================= Reading config file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e90c65df/tmp/ENST00000666628_refx/configfile.txt ============================================================================= ----------------------------------------------------------------------------- Warning: Non-parallel version of QRNA cannot spawn threads. Warning: More threads than cores available. Parameters to be used: Number of minimization steps (NSTEPS): 5000 Golden section step sizes: maximal (MAXSTEP): 0.0001 minimal (MINSTEP): 1e-08 Verbosity (VERBOSE): 1 Write output every: 100 steps (WRITEFREQ) Record trajectory (TRAJECTORY): disabled Pedantic treatment of molecules (PEDANTICMOL): disabled Van der Waals cutoff radius (CUTOFF): 12 Born generalized solvent (USEBORN): disabled Constraints on secondary struct. (SSCONSTR): enabled Auto-detection of secondary struct. (SSDETECT): enabled Secondary structure (SECSTRUCT): none specified Hydrogen bonds (HBONDS): enabled Electrostatics (ELECTR): enabled van der Waals interactions (VANDERWAALS): enabled Anti-blow-up protection (BLOWGUARD): enabled Occupancy as positional restraint (POSRESTRAINTS): disabled Restraints description (RESTRFILE): none Number of parallel threads: 1 ----------------------------------------------------------------------------- Internal Warning: unknown atom type(s) in bond: C2 H5 Internal Warning: unknown atom type(s) in bond: C2 N* Internal Warning: unknown atom type(s) in bond: C2 NB Internal Warning: unknown atom type(s) in bond: C C1 Internal Warning: unknown atom type(s) in bond: CA C1 Internal Warning: unknown atom type(s) in bond: C1 C1 Internal Warning: unknown atom type(s) in bond: C1 CT Internal Warning: unknown atom type(s) in bond: C1 HA Internal Warning: unknown atom type(s) in bond: C1 H4 Internal Warning: unknown atom type(s) in bond: C1 N* Internal Warning: unknown atoms in angle: H5 C2 N* Internal Warning: unknown atoms in angle: H5 C2 NB Internal Warning: unknown atoms in angle: N* C2 NB Internal Warning: unknown atoms in angle: CB N* C2 Internal Warning: unknown atoms in angle: C2 N* CT Internal Warning: unknown atoms in angle: CB NB C2 Internal Warning: unknown atoms in angle: C1 C NA Internal Warning: unknown atoms in angle: C1 C O Internal Warning: unknown atoms in angle: C1 CA N2 Internal Warning: unknown atoms in angle: C1 CA NC Internal Warning: unknown atoms in angle: C C1 C1 Internal Warning: unknown atoms in angle: C C1 CT Internal Warning: unknown atoms in angle: C C1 HA Internal Warning: unknown atoms in angle: C C1 H4 Internal Warning: unknown atoms in angle: CA C1 C1 Internal Warning: unknown atoms in angle: CA C1 HA Internal Warning: unknown atoms in angle: CA C1 H4 Internal Warning: unknown atoms in angle: C1 C1 CT Internal Warning: unknown atoms in angle: C1 C1 HA Internal Warning: unknown atoms in angle: C1 C1 H4 Internal Warning: unknown atoms in angle: C1 C1 N* Internal Warning: unknown atoms in angle: H4 C1 N* Internal Warning: unknown atoms in angle: H1 CT C1 Internal Warning: unknown atoms in angle: HC CT C1 Internal Warning: unknown atoms in angle: C N* C1 Internal Warning: unknown atoms in angle: C1 N* CT Internal Warning: unknown atom(s) in dihedral: X C2 N* X Internal Warning: unknown atom(s) in dihedral: X C2 NB X Internal Warning: unknown atom(s) in dihedral: X C C1 X Internal Warning: unknown atom(s) in dihedral: X CA C1 X Internal Warning: unknown atom(s) in dihedral: X C1 C1 X Internal Warning: unknown atom(s) in dihedral: X C1 CT X Internal Warning: unknown atom(s) in dihedral: X C1 N* X Internal Warning: unknown atom(s) in dihedral: HC CT C1 C1 Internal Warning: unknown atom(s) in dihedral: HC CT C1 C1 Internal Warning: unknown atom(s) in dihedral: C1 C1 C O Internal Warning: unknown atom(s) in dihedral: C1 C1 C O Internal Warning: unknown atom(s) in dihedral: OS CT N* C2 Internal Warning: unknown atom(s) in dihedral: OS CT N* C2 Internal Warning: unknown atom(s) in dihedral: OS CT N* C2 Internal Warning: unknown atom(s) in dihedral: OS CT N* C1 Internal Warning: unknown atom(s) in dihedral: OS CT N* C1 Internal Warning: unknown atom(s) in dihedral: OS CT N* C1 Internal Warning: unknown atom(s) in dihedral: OS CT N* C1 Internal Warning: unknown atom(s) in improper: C C1 N* CT Internal Warning: unknown atom(s) in improper: C C1 C1 CT Internal Warning: unknown atom(s) in improper: C1 N2 CA NC Initializing... Generic atom descriptions read: 47 Generic bond descriptions read: 199 Generic angle descriptions read: 567 Generic dihedral descriptions read: 812 Generic improper descriptions read: 116 Generic vdW descriptions read: 47 ----------------------------------------------------------------------------- ============================================================================= Reading PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e90c65df/tmp/ENST00000666628_refx/ENST00000666628.pdb ============================================================================= Atom's 1900 H6 residue renamed to RU3 Atom's 1899 H5 residue renamed to RU3 Atom's 1898 H3 residue renamed to RU3 Atom's 1897 HO'2 residue renamed to RU3 Atom's 1896 H2' residue renamed to RU3 Atom's 1895 H1' residue renamed to RU3 Atom's 1894 H3' residue renamed to RU3 Atom's 1893 H4' residue renamed to RU3 Atom's 1892 H5'2 residue renamed to RU3 Atom's 1891 H5'1 residue renamed to RU3 Atom's 1890 C6 residue renamed to RU3 Atom's 1889 C5 residue renamed to RU3 Atom's 1888 O4 residue renamed to RU3 Atom's 1887 C4 residue renamed to RU3 Atom's 1886 N3 residue renamed to RU3 Atom's 1885 O2 residue renamed to RU3 Atom's 1884 C2 residue renamed to RU3 Atom's 1883 N1 residue renamed to RU3 Atom's 1882 O2' residue renamed to RU3 Atom's 1881 C2' residue renamed to RU3 Atom's 1880 C1' residue renamed to RU3 Atom's 1879 O3' residue renamed to RU3 Atom's 1878 C3' residue renamed to RU3 Atom's 1877 O4' residue renamed to RU3 Atom's 1876 C4' residue renamed to RU3 Atom's 1875 C5' residue renamed to RU3 Atom's 1874 O5' residue renamed to RU3 Atom's 1873 OP1 residue renamed to RU3 Atom's 1872 OP2 residue renamed to RU3 Atom's 1871 P residue renamed to RU3 Missing atom added: ATOM 31 H3T RU3 A 60 26.836 -23.502 -14.128 1.00 0.00 H Missing atom added: ATOM 2 OP3 A A 1 36.217 14.630 -15.113 1.00 30.66 O Number of atoms: 1902 Number of residues: 60 Building intraresidual bonds... Building intraresidual angles... Building intraresidual dihedrals... Building intraresidual impropers... Building interresidual bonds... Building interresidual angles... Internal Warning: unknown atoms in angle: H5 C2 N* Internal Warning: unknown atoms in angle: H5 C2 NB Internal Warning: unknown atoms in angle: N* C2 NB Internal Warning: unknown atoms in angle: CB N* C2 Internal Warning: unknown atoms in angle: C2 N* CT Internal Warning: unknown atoms in angle: CB NB C2 Internal Warning: unknown atoms in angle: C1 C NA Internal Warning: unknown atoms in angle: C1 C O Internal Warning: unknown atoms in angle: C1 CA N2 Internal Warning: unknown atoms in angle: C1 CA NC Internal Warning: unknown atoms in angle: C C1 C1 Internal Warning: unknown atoms in angle: C C1 CT Internal Warning: unknown atoms in angle: C C1 HA Internal Warning: unknown atoms in angle: C C1 H4 Internal Warning: unknown atoms in angle: CA C1 C1 Internal Warning: unknown atoms in angle: CA C1 HA Internal Warning: unknown atoms in angle: CA C1 H4 Internal Warning: unknown atoms in angle: C1 C1 CT Internal Warning: unknown atoms in angle: C1 C1 HA Internal Warning: unknown atoms in angle: C1 C1 H4 Internal Warning: unknown atoms in angle: C1 C1 N* Internal Warning: unknown atoms in angle: H4 C1 N* Internal Warning: unknown atoms in angle: H1 CT C1 Internal Warning: unknown atoms in angle: HC CT C1 Internal Warning: unknown atoms in angle: C N* C1 Internal Warning: unknown atoms in angle: C1 N* CT Building interresidual dihedrals... Internal Warning: unknown atom(s) in dihedral: X C2 N* X Internal Warning: unknown atom(s) in dihedral: X C2 NB X Internal Warning: unknown atom(s) in dihedral: X C C1 X Internal Warning: unknown atom(s) in dihedral: X CA C1 X Internal Warning: unknown atom(s) in dihedral: X C1 C1 X Internal Warning: unknown atom(s) in dihedral: X C1 CT X Internal Warning: unknown atom(s) in dihedral: X C1 N* X Internal Warning: unknown atom(s) in dihedral: HC CT C1 C1 Internal Warning: unknown atom(s) in dihedral: HC CT C1 C1 Internal Warning: unknown atom(s) in dihedral: C1 C1 C O Internal Warning: unknown atom(s) in dihedral: C1 C1 C O Internal Warning: unknown atom(s) in dihedral: OS CT N* C2 Internal Warning: unknown atom(s) in dihedral: OS CT N* C2 Internal Warning: unknown atom(s) in dihedral: OS CT N* C2 Internal Warning: unknown atom(s) in dihedral: OS CT N* C1 Internal Warning: unknown atom(s) in dihedral: OS CT N* C1 Internal Warning: unknown atom(s) in dihedral: OS CT N* C1 Internal Warning: unknown atom(s) in dihedral: OS CT N* C1 Number of bonds built: 2048 Number of angles built: 3669 Number of dihedrals built: 5585 Number of impropers built: 395 ----------------------------------------------------------------------------- End of molecule (chain) ----------------------------------------------------------------------------- ----------------------------------------------------------------------------- Building interresidual nonbonded pairs & H-bonds (it may take a while)... Number of electrostatic pairs: 1802134 Number of van der Waals pairs: 160930 Number of H-bonds built: 5 Number of spring restraints: 0 Number of positional restraints: 0 Number of base pairs built: 0 Number of molecules (chains) read: 1 ----------------------------------------------------------------------------- Performing minimization step: 1. Total energy = 4260.9439 kcal/mol (4259.7050 without restraints) Performing minimization step: 2. Total energy = 4250.4979 kcal/mol (4249.2708 without restraints) Performing minimization step: 3. Total energy = 4240.1498 kcal/mol (4238.9339 without restraints) Performing minimization step: 4. Total energy = 4229.8956 kcal/mol (4228.6907 without restraints) Performing minimization step: 5. Total energy = 4219.7319 kcal/mol (4218.5374 without restraints) Performing minimization step: 6. Total energy = 4209.6548 kcal/mol (4208.4703 without restraints) Performing minimization step: 7. Total energy = 4199.6611 kcal/mol (4198.4863 without restraints) Performing minimization step: 8. Total energy = 4189.7475 kcal/mol (4188.5820 without restraints) Performing minimization step: 9. Total energy = 4179.9115 kcal/mol (4178.7549 without restraints) Performing minimization step: 10. Total energy = 4170.1500 kcal/mol (4169.0021 without restraints) Performing minimization step: 11. Total energy = 4160.4609 kcal/mol (4159.3215 without restraints) Performing minimization step: 12. Total energy = 4150.8418 kcal/mol (4149.7105 without restraints) Performing minimization step: 13. Total energy = 4141.2906 kcal/mol (4140.1672 without restraints) Performing minimization step: 14. Total energy = 4131.8049 kcal/mol (4130.6891 without restraints) Performing minimization step: 15. Total energy = 4122.3832 kcal/mol (4121.2748 without restraints) Performing minimization step: 16. Total energy = 4113.0237 kcal/mol (4111.9226 without restraints) Performing minimization step: 17. Total energy = 4103.7248 kcal/mol (4102.6307 without restraints) Performing minimization step: 18. Total energy = 4094.4850 kcal/mol (4093.3979 without restraints) Performing minimization step: 19. Total energy = 4085.3029 kcal/mol (4084.2224 without restraints) Performing minimization step: 20. Total energy = 4076.1761 kcal/mol (4075.1021 without restraints) Performing minimization step: 21. Total energy = 4067.1044 kcal/mol (4066.0369 without restraints) Performing minimization step: 22. Total energy = 4058.0863 kcal/mol (4057.0249 without restraints) Performing minimization step: 23. Total energy = 4049.1206 kcal/mol (4048.0654 without restraints) Performing minimization step: 24. Total energy = 4040.2063 kcal/mol (4039.1571 without restraints) Performing minimization step: 25. Total energy = 4031.3428 kcal/mol (4030.2995 without restraints) Performing minimization step: 26. Total energy = 4022.5283 kcal/mol (4021.4908 without restraints) Performing minimization step: 27. Total energy = 4013.7624 kcal/mol (4012.7305 without restraints) Performing minimization step: 28. Total energy = 4005.0441 kcal/mol (4004.0178 without restraints) Performing minimization step: 29. Total energy = 3996.3726 kcal/mol (3995.3518 without restraints) Performing minimization step: 30. Total energy = 3987.7473 kcal/mol (3986.7319 without restraints) Performing minimization step: 31. Total energy = 3979.1674 kcal/mol (3978.1574 without restraints) Performing minimization step: 32. Total energy = 3970.6322 kcal/mol (3969.6274 without restraints) Performing minimization step: 33. Total energy = 3962.1411 kcal/mol (3961.1414 without restraints) Performing minimization step: 34. Total energy = 3953.6934 kcal/mol (3952.6989 without restraints) Performing minimization step: 35. Total energy = 3945.2886 kcal/mol (3944.2991 without restraints) Performing minimization step: 36. Total energy = 3936.9260 kcal/mol (3935.9414 without restraints) Performing minimization step: 37. Total energy = 3928.6050 kcal/mol (3927.6253 without restraints) Performing minimization step: 38. Total energy = 3920.3254 kcal/mol (3919.3505 without restraints) Performing minimization step: 39. Total energy = 3912.0865 kcal/mol (3911.1165 without restraints) Performing minimization step: 40. Total energy = 3903.8879 kcal/mol (3902.9224 without restraints) Performing minimization step: 41. Total energy = 3895.7291 kcal/mol (3894.7684 without restraints) Performing minimization step: 42. Total energy = 3887.6098 kcal/mol (3886.6538 without restraints) Performing minimization step: 43. Total energy = 3879.5297 kcal/mol (3878.5782 without restraints) Performing minimization step: 44. Total energy = 3871.4880 kcal/mol (3870.5411 without restraints) Performing minimization step: 45. Total energy = 3863.4849 kcal/mol (3862.5425 without restraints) Performing minimization step: 46. Total energy = 3855.5193 kcal/mol (3854.5814 without restraints) Performing minimization step: 47. Total energy = 3847.5916 kcal/mol (3846.6580 without restraints) Performing minimization step: 48. Total energy = 3839.7011 kcal/mol (3838.7720 without restraints) Performing minimization step: 49. Total energy = 3831.8475 kcal/mol (3830.9227 without restraints) Performing minimization step: 50. Total energy = 3824.0305 kcal/mol (3823.1099 without restraints) Performing minimization step: 51. Total energy = 3816.2498 kcal/mol (3815.3336 without restraints) Performing minimization step: 52. Total energy = 3808.5048 kcal/mol (3807.5927 without restraints) Performing minimization step: 53. Total energy = 3800.7954 kcal/mol (3799.8877 without restraints) Performing minimization step: 54. Total energy = 3793.1219 kcal/mol (3792.2183 without restraints) Performing minimization step: 55. Total energy = 3785.4838 kcal/mol (3784.5844 without restraints) Performing minimization step: 56. Total energy = 3777.8809 kcal/mol (3776.9856 without restraints) Performing minimization step: 57. Total energy = 3770.3130 kcal/mol (3769.4218 without restraints) Performing minimization step: 58. Total energy = 3762.7794 kcal/mol (3761.8923 without restraints) Performing minimization step: 59. Total energy = 3755.2800 kcal/mol (3754.3967 without restraints) Performing minimization step: 60. Total energy = 3747.8145 kcal/mol (3746.9353 without restraints) Performing minimization step: 61. Total energy = 3740.3831 kcal/mol (3739.5079 without restraints) Performing minimization step: 62. Total energy = 3732.9854 kcal/mol (3732.1142 without restraints) Performing minimization step: 63. Total energy = 3725.6214 kcal/mol (3724.7542 without restraints) Performing minimization step: 64. Total energy = 3718.2903 kcal/mol (3717.4269 without restraints) Performing minimization step: 65. Total energy = 3710.9923 kcal/mol (3710.1328 without restraints) Performing minimization step: 66. Total energy = 3703.7277 kcal/mol (3702.8723 without restraints) Performing minimization step: 67. Total energy = 3696.4958 kcal/mol (3695.6441 without restraints) Performing minimization step: 68. Total energy = 3689.2966 kcal/mol (3688.4487 without restraints) Performing minimization step: 69. Total energy = 3682.1296 kcal/mol (3681.2855 without restraints) Performing minimization step: 70. Total energy = 3674.9948 kcal/mol (3674.1546 without restraints) Performing minimization step: 71. Total energy = 3667.8920 kcal/mol (3667.0555 without restraints) Performing minimization step: 72. Total energy = 3660.8213 kcal/mol (3659.9886 without restraints) Performing minimization step: 73. Total energy = 3653.7824 kcal/mol (3652.9534 without restraints) Performing minimization step: 74. Total energy = 3646.7749 kcal/mol (3645.9497 without restraints) Performing minimization step: 75. Total energy = 3639.7990 kcal/mol (3638.9774 without restraints) Performing minimization step: 76. Total energy = 3632.8547 kcal/mol (3632.0369 without restraints) Performing minimization step: 77. Total energy = 3625.9415 kcal/mol (3625.1273 without restraints) Performing minimization step: 78. Total energy = 3619.0594 kcal/mol (3618.2489 without restraints) Performing minimization step: 79. Total energy = 3612.2082 kcal/mol (3611.4013 without restraints) Performing minimization step: 80. Total energy = 3605.3877 kcal/mol (3604.5845 without restraints) Performing minimization step: 81. Total energy = 3598.5981 kcal/mol (3597.7985 without restraints) Performing minimization step: 82. Total energy = 3591.8386 kcal/mol (3591.0426 without restraints) Performing minimization step: 83. Total energy = 3585.1103 kcal/mol (3584.3180 without restraints) Performing minimization step: 84. Total energy = 3578.4119 kcal/mol (3577.6231 without restraints) Performing minimization step: 85. Total energy = 3571.7434 kcal/mol (3570.9580 without restraints) Performing minimization step: 86. Total energy = 3565.1051 kcal/mol (3564.3233 without restraints) Performing minimization step: 87. Total energy = 3558.4967 kcal/mol (3557.7185 without restraints) Performing minimization step: 88. Total energy = 3551.9182 kcal/mol (3551.1435 without restraints) Performing minimization step: 89. Total energy = 3545.3695 kcal/mol (3544.5984 without restraints) Performing minimization step: 90. Total energy = 3538.8501 kcal/mol (3538.0824 without restraints) Performing minimization step: 91. Total energy = 3532.3603 kcal/mol (3531.5960 without restraints) Performing minimization step: 92. Total energy = 3525.9001 kcal/mol (3525.1393 without restraints) Performing minimization step: 93. Total energy = 3519.4689 kcal/mol (3518.7115 without restraints) Performing minimization step: 94. Total energy = 3513.0667 kcal/mol (3512.3127 without restraints) Performing minimization step: 95. Total energy = 3506.6937 kcal/mol (3505.9432 without restraints) Performing minimization step: 96. Total energy = 3500.3497 kcal/mol (3499.6027 without restraints) Performing minimization step: 97. Total energy = 3494.0345 kcal/mol (3493.2908 without restraints) Performing minimization step: 98. Total energy = 3487.7478 kcal/mol (3487.0075 without restraints) Performing minimization step: 99. Total energy = 3481.4898 kcal/mol (3480.7529 without restraints) Performing minimization step: 100. Total energy = 3475.2603 kcal/mol (3474.5267 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e90c65df/tmp/ENST00000666628_refx/ENST00000666628_refx.pdb ...Done. Performing minimization step: 101. Total energy = 3469.0589 kcal/mol (3468.3286 without restraints) Performing minimization step: 102. Total energy = 3462.8860 kcal/mol (3462.1591 without restraints) Performing minimization step: 103. Total energy = 3456.7413 kcal/mol (3456.0177 without restraints) Performing minimization step: 104. Total energy = 3450.6251 kcal/mol (3449.9048 without restraints) Performing minimization step: 105. Total energy = 3444.5365 kcal/mol (3443.8195 without restraints) Performing minimization step: 106. Total energy = 3438.4755 kcal/mol (3437.7618 without restraints) Performing minimization step: 107. Total energy = 3432.4425 kcal/mol (3431.7321 without restraints) Performing minimization step: 108. Total energy = 3426.4372 kcal/mol (3425.7300 without restraints) Performing minimization step: 109. Total energy = 3420.4593 kcal/mol (3419.7554 without restraints) Performing minimization step: 110. Total energy = 3414.5093 kcal/mol (3413.8086 without restraints) Performing minimization step: 111. Total energy = 3408.5866 kcal/mol (3407.8891 without restraints) Performing minimization step: 112. Total energy = 3402.6909 kcal/mol (3401.9964 without restraints) Performing minimization step: 113. Total energy = 3396.8223 kcal/mol (3396.1313 without restraints) Performing minimization step: 114. Total energy = 3390.9809 kcal/mol (3390.2930 without restraints) Performing minimization step: 115. Total energy = 3385.1667 kcal/mol (3384.4820 without restraints) Performing minimization step: 116. Total energy = 3379.3794 kcal/mol (3378.6979 without restraints) Performing minimization step: 117. Total energy = 3373.6189 kcal/mol (3372.9406 without restraints) Performing minimization step: 118. Total energy = 3367.8850 kcal/mol (3367.2097 without restraints) Performing minimization step: 119. Total energy = 3362.1774 kcal/mol (3361.5053 without restraints) Performing minimization step: 120. Total energy = 3356.4968 kcal/mol (3355.8278 without restraints) Performing minimization step: 121. Total energy = 3350.8426 kcal/mol (3350.1768 without restraints) Performing minimization step: 122. Total energy = 3345.2149 kcal/mol (3344.5522 without restraints) Performing minimization step: 123. Total energy = 3339.6134 kcal/mol (3338.9537 without restraints) Performing minimization step: 124. Total energy = 3334.0380 kcal/mol (3333.3814 without restraints) Performing minimization step: 125. Total energy = 3328.4889 kcal/mol (3327.8354 without restraints) Performing minimization step: 126. Total energy = 3322.9656 kcal/mol (3322.3152 without restraints) Performing minimization step: 127. Total energy = 3317.4681 kcal/mol (3316.8208 without restraints) Performing minimization step: 128. Total energy = 3311.9965 kcal/mol (3311.3522 without restraints) Performing minimization step: 129. Total energy = 3306.5505 kcal/mol (3305.9092 without restraints) Performing minimization step: 130. Total energy = 3301.1304 kcal/mol (3300.4922 without restraints) Performing minimization step: 131. Total energy = 3295.7357 kcal/mol (3295.1004 without restraints) Performing minimization step: 132. Total energy = 3290.3659 kcal/mol (3289.7336 without restraints) Performing minimization step: 133. Total energy = 3285.0218 kcal/mol (3284.3926 without restraints) Performing minimization step: 134. Total energy = 3279.7030 kcal/mol (3279.0767 without restraints) Performing minimization step: 135. Total energy = 3274.4093 kcal/mol (3273.7859 without restraints) Performing minimization step: 136. Total energy = 3269.1407 kcal/mol (3268.5203 without restraints) Performing minimization step: 137. Total energy = 3263.8967 kcal/mol (3263.2792 without restraints) Performing minimization step: 138. Total energy = 3258.6777 kcal/mol (3258.0632 without restraints) Performing minimization step: 139. Total energy = 3253.4836 kcal/mol (3252.8720 without restraints) Performing minimization step: 140. Total energy = 3248.3145 kcal/mol (3247.7058 without restraints) Performing minimization step: 141. Total energy = 3243.1697 kcal/mol (3242.5639 without restraints) Performing minimization step: 142. Total energy = 3238.0488 kcal/mol (3237.4459 without restraints) Performing minimization step: 143. Total energy = 3232.9530 kcal/mol (3232.3529 without restraints) Performing minimization step: 144. Total energy = 3227.8817 kcal/mol (3227.2845 without restraints) Performing minimization step: 145. Total energy = 3222.8344 kcal/mol (3222.2400 without restraints) Performing minimization step: 146. Total energy = 3217.8114 kcal/mol (3217.2199 without restraints) Performing minimization step: 147. Total energy = 3212.8123 kcal/mol (3212.2236 without restraints) Performing minimization step: 148. Total energy = 3207.8371 kcal/mol (3207.2512 without restraints) Performing minimization step: 149. Total energy = 3202.8859 kcal/mol (3202.3030 without restraints) Performing minimization step: 150. Total energy = 3197.9585 kcal/mol (3197.3783 without restraints) Performing minimization step: 151. Total energy = 3193.0546 kcal/mol (3192.4772 without restraints) Performing minimization step: 152. Total energy = 3188.1741 kcal/mol (3187.5992 without restraints) Performing minimization step: 153. Total energy = 3183.3170 kcal/mol (3182.7452 without restraints) Performing minimization step: 154. Total energy = 3178.4838 kcal/mol (3177.9146 without restraints) Performing minimization step: 155. Total energy = 3173.6738 kcal/mol (3173.1074 without restraints) Performing minimization step: 156. Total energy = 3168.8867 kcal/mol (3168.3230 without restraints) Performing minimization step: 157. Total energy = 3164.1228 kcal/mol (3163.5620 without restraints) Performing minimization step: 158. Total energy = 3159.3821 kcal/mol (3158.8238 without restraints) Performing minimization step: 159. Total energy = 3154.6640 kcal/mol (3154.1084 without restraints) Performing minimization step: 160. Total energy = 3149.9688 kcal/mol (3149.4159 without restraints) Performing minimization step: 161. Total energy = 3145.2964 kcal/mol (3144.7463 without restraints) Performing minimization step: 162. Total energy = 3140.6465 kcal/mol (3140.0989 without restraints) Performing minimization step: 163. Total energy = 3136.0192 kcal/mol (3135.4743 without restraints) Performing minimization step: 164. Total energy = 3131.4144 kcal/mol (3130.8722 without restraints) Performing minimization step: 165. Total energy = 3126.8321 kcal/mol (3126.2926 without restraints) Performing minimization step: 166. Total energy = 3122.2720 kcal/mol (3121.7350 without restraints) Performing minimization step: 167. Total energy = 3117.7340 kcal/mol (3117.1996 without restraints) Performing minimization step: 168. Total energy = 3113.2180 kcal/mol (3112.6862 without restraints) Performing minimization step: 169. Total energy = 3108.7237 kcal/mol (3108.1946 without restraints) Performing minimization step: 170. Total energy = 3104.2516 kcal/mol (3103.7250 without restraints) Performing minimization step: 171. Total energy = 3099.8013 kcal/mol (3099.2772 without restraints) Performing minimization step: 172. Total energy = 3095.3726 kcal/mol (3094.8511 without restraints) Performing minimization step: 173. Total energy = 3090.9651 kcal/mol (3090.4462 without restraints) Performing minimization step: 174. Total energy = 3086.5795 kcal/mol (3086.0632 without restraints) Performing minimization step: 175. Total energy = 3082.2154 kcal/mol (3081.7015 without restraints) Performing minimization step: 176. Total energy = 3077.8725 kcal/mol (3077.3611 without restraints) Performing minimization step: 177. Total energy = 3073.5508 kcal/mol (3073.0419 without restraints) Performing minimization step: 178. Total energy = 3069.2501 kcal/mol (3068.7438 without restraints) Performing minimization step: 179. Total energy = 3064.9705 kcal/mol (3064.4666 without restraints) Performing minimization step: 180. Total energy = 3060.7120 kcal/mol (3060.2106 without restraints) Performing minimization step: 181. Total energy = 3056.4743 kcal/mol (3055.9753 without restraints) Performing minimization step: 182. Total energy = 3052.2571 kcal/mol (3051.7606 without restraints) Performing minimization step: 183. Total energy = 3048.0608 kcal/mol (3047.5667 without restraints) Performing minimization step: 184. Total energy = 3043.8848 kcal/mol (3043.3932 without restraints) Performing minimization step: 185. Total energy = 3039.7292 kcal/mol (3039.2398 without restraints) Performing minimization step: 186. Total energy = 3035.5939 kcal/mol (3035.1070 without restraints) Performing minimization step: 187. Total energy = 3031.4787 kcal/mol (3030.9941 without restraints) Performing minimization step: 188. Total energy = 3027.3838 kcal/mol (3026.9016 without restraints) Performing minimization step: 189. Total energy = 3023.3092 kcal/mol (3022.8294 without restraints) Performing minimization step: 190. Total energy = 3019.2544 kcal/mol (3018.7769 without restraints) Performing minimization step: 191. Total energy = 3015.2196 kcal/mol (3014.7445 without restraints) Performing minimization step: 192. Total energy = 3011.2043 kcal/mol (3010.7315 without restraints) Performing minimization step: 193. Total energy = 3007.2086 kcal/mol (3006.7380 without restraints) Performing minimization step: 194. Total energy = 3003.2324 kcal/mol (3002.7643 without restraints) Performing minimization step: 195. Total energy = 2999.2760 kcal/mol (2998.8101 without restraints) Performing minimization step: 196. Total energy = 2995.3391 kcal/mol (2994.8755 without restraints) Performing minimization step: 197. Total energy = 2991.4212 kcal/mol (2990.9599 without restraints) Performing minimization step: 198. Total energy = 2987.5223 kcal/mol (2987.0632 without restraints) Performing minimization step: 199. Total energy = 2983.6424 kcal/mol (2983.1856 without restraints) Performing minimization step: 200. Total energy = 2979.7815 kcal/mol (2979.3269 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e90c65df/tmp/ENST00000666628_refx/ENST00000666628_refx.pdb ...Done. Performing minimization step: 201. Total energy = 2975.9393 kcal/mol (2975.4869 without restraints) Performing minimization step: 202. Total energy = 2972.1160 kcal/mol (2971.6659 without restraints) Performing minimization step: 203. Total energy = 2968.3114 kcal/mol (2967.8634 without restraints) Performing minimization step: 204. Total energy = 2964.5254 kcal/mol (2964.0796 without restraints) Performing minimization step: 205. Total energy = 2960.7580 kcal/mol (2960.3146 without restraints) Performing minimization step: 206. Total energy = 2957.0089 kcal/mol (2956.5675 without restraints) Performing minimization step: 207. Total energy = 2953.2780 kcal/mol (2952.8387 without restraints) Performing minimization step: 208. Total energy = 2949.5652 kcal/mol (2949.1280 without restraints) Performing minimization step: 209. Total energy = 2945.8706 kcal/mol (2945.4356 without restraints) Performing minimization step: 210. Total energy = 2942.1939 kcal/mol (2941.7610 without restraints) Performing minimization step: 211. Total energy = 2938.5350 kcal/mol (2938.1042 without restraints) Performing minimization step: 212. Total energy = 2934.8941 kcal/mol (2934.4654 without restraints) Performing minimization step: 213. Total energy = 2931.2707 kcal/mol (2930.8441 without restraints) Performing minimization step: 214. Total energy = 2927.6649 kcal/mol (2927.2403 without restraints) Performing minimization step: 215. Total energy = 2924.0765 kcal/mol (2923.6540 without restraints) Performing minimization step: 216. Total energy = 2920.5055 kcal/mol (2920.0850 without restraints) Performing minimization step: 217. Total energy = 2916.9515 kcal/mol (2916.5331 without restraints) Performing minimization step: 218. Total energy = 2913.4151 kcal/mol (2912.9987 without restraints) Performing minimization step: 219. Total energy = 2909.8957 kcal/mol (2909.4813 without restraints) Performing minimization step: 220. Total energy = 2906.3935 kcal/mol (2905.9813 without restraints) Performing minimization step: 221. Total energy = 2902.9079 kcal/mol (2902.4975 without restraints) Performing minimization step: 222. Total energy = 2899.4391 kcal/mol (2899.0307 without restraints) Performing minimization step: 223. Total energy = 2895.9870 kcal/mol (2895.5805 without restraints) Performing minimization step: 224. Total energy = 2892.5512 kcal/mol (2892.1467 without restraints) Performing minimization step: 225. Total energy = 2889.1323 kcal/mol (2888.7298 without restraints) Performing minimization step: 226. Total energy = 2885.7297 kcal/mol (2885.3291 without restraints) Performing minimization step: 227. Total energy = 2882.3433 kcal/mol (2881.9445 without restraints) Performing minimization step: 228. Total energy = 2878.9732 kcal/mol (2878.5763 without restraints) Performing minimization step: 229. Total energy = 2875.6193 kcal/mol (2875.2244 without restraints) Performing minimization step: 230. Total energy = 2872.2812 kcal/mol (2871.8883 without restraints) Performing minimization step: 231. Total energy = 2868.9593 kcal/mol (2868.5681 without restraints) Performing minimization step: 232. Total energy = 2865.6533 kcal/mol (2865.2639 without restraints) Performing minimization step: 233. Total energy = 2862.3627 kcal/mol (2861.9752 without restraints) Performing minimization step: 234. Total energy = 2859.0878 kcal/mol (2858.7021 without restraints) Performing minimization step: 235. Total energy = 2855.8283 kcal/mol (2855.4445 without restraints) Performing minimization step: 236. Total energy = 2852.5846 kcal/mol (2852.2026 without restraints) Performing minimization step: 237. Total energy = 2849.3558 kcal/mol (2848.9755 without restraints) Performing minimization step: 238. Total energy = 2846.1423 kcal/mol (2845.7640 without restraints) Performing minimization step: 239. Total energy = 2842.9441 kcal/mol (2842.5675 without restraints) Performing minimization step: 240. Total energy = 2839.7612 kcal/mol (2839.3863 without restraints) Performing minimization step: 241. Total energy = 2836.5932 kcal/mol (2836.2201 without restraints) Performing minimization step: 242. Total energy = 2833.4394 kcal/mol (2833.0680 without restraints) Performing minimization step: 243. Total energy = 2830.3007 kcal/mol (2829.9311 without restraints) Performing minimization step: 244. Total energy = 2827.1771 kcal/mol (2826.8093 without restraints) Performing minimization step: 245. Total energy = 2824.0679 kcal/mol (2823.7017 without restraints) Performing minimization step: 246. Total energy = 2820.9728 kcal/mol (2820.6084 without restraints) Performing minimization step: 247. Total energy = 2817.8924 kcal/mol (2817.5297 without restraints) Performing minimization step: 248. Total energy = 2814.8262 kcal/mol (2814.4652 without restraints) Performing minimization step: 249. Total energy = 2811.7743 kcal/mol (2811.4149 without restraints) Performing minimization step: 250. Total energy = 2808.7368 kcal/mol (2808.3791 without restraints) Performing minimization step: 251. Total energy = 2805.7128 kcal/mol (2805.3567 without restraints) Performing minimization step: 252. Total energy = 2802.7031 kcal/mol (2802.3486 without restraints) Performing minimization step: 253. Total energy = 2799.7071 kcal/mol (2799.3543 without restraints) Performing minimization step: 254. Total energy = 2796.7250 kcal/mol (2796.3740 without restraints) Performing minimization step: 255. Total energy = 2793.7566 kcal/mol (2793.4071 without restraints) Performing minimization step: 256. Total energy = 2790.8019 kcal/mol (2790.4539 without restraints) Performing minimization step: 257. Total energy = 2787.8604 kcal/mol (2787.5140 without restraints) Performing minimization step: 258. Total energy = 2784.9328 kcal/mol (2784.5880 without restraints) Performing minimization step: 259. Total energy = 2782.0180 kcal/mol (2781.6747 without restraints) Performing minimization step: 260. Total energy = 2779.1166 kcal/mol (2778.7749 without restraints) Performing minimization step: 261. Total energy = 2776.2283 kcal/mol (2775.8881 without restraints) Performing minimization step: 262. Total energy = 2773.3530 kcal/mol (2773.0144 without restraints) Performing minimization step: 263. Total energy = 2770.4907 kcal/mol (2770.1536 without restraints) Performing minimization step: 264. Total energy = 2767.6413 kcal/mol (2767.3058 without restraints) Performing minimization step: 265. Total energy = 2764.8048 kcal/mol (2764.4707 without restraints) Performing minimization step: 266. Total energy = 2761.9809 kcal/mol (2761.6484 without restraints) Performing minimization step: 267. Total energy = 2759.1697 kcal/mol (2758.8386 without restraints) Performing minimization step: 268. Total energy = 2756.3709 kcal/mol (2756.0413 without restraints) Performing minimization step: 269. Total energy = 2753.5847 kcal/mol (2753.2566 without restraints) Performing minimization step: 270. Total energy = 2750.8103 kcal/mol (2750.4835 without restraints) Performing minimization step: 271. Total energy = 2748.0484 kcal/mol (2747.7231 without restraints) Performing minimization step: 272. Total energy = 2745.2990 kcal/mol (2744.9752 without restraints) Performing minimization step: 273. Total energy = 2742.5619 kcal/mol (2742.2395 without restraints) Performing minimization step: 274. Total energy = 2739.8368 kcal/mol (2739.5158 without restraints) Performing minimization step: 275. Total energy = 2737.1237 kcal/mol (2736.8041 without restraints) Performing minimization step: 276. Total energy = 2734.4225 kcal/mol (2734.1044 without restraints) Performing minimization step: 277. Total energy = 2731.7331 kcal/mol (2731.4164 without restraints) Performing minimization step: 278. Total energy = 2729.0555 kcal/mol (2728.7401 without restraints) Performing minimization step: 279. Total energy = 2726.3895 kcal/mol (2726.0755 without restraints) Performing minimization step: 280. Total energy = 2723.7352 kcal/mol (2723.4227 without restraints) Performing minimization step: 281. Total energy = 2721.0922 kcal/mol (2720.7809 without restraints) Performing minimization step: 282. Total energy = 2718.4607 kcal/mol (2718.1508 without restraints) Performing minimization step: 283. Total energy = 2715.8408 kcal/mol (2715.5322 without restraints) Performing minimization step: 284. Total energy = 2713.2320 kcal/mol (2712.9247 without restraints) Performing minimization step: 285. Total energy = 2710.6344 kcal/mol (2710.3285 without restraints) Performing minimization step: 286. Total energy = 2708.0479 kcal/mol (2707.7432 without restraints) Performing minimization step: 287. Total energy = 2705.4725 kcal/mol (2705.1692 without restraints) Performing minimization step: 288. Total energy = 2702.9081 kcal/mol (2702.6060 without restraints) Performing minimization step: 289. Total energy = 2700.3546 kcal/mol (2700.0539 without restraints) Performing minimization step: 290. Total energy = 2697.8120 kcal/mol (2697.5125 without restraints) Performing minimization step: 291. Total energy = 2695.2802 kcal/mol (2694.9820 without restraints) Performing minimization step: 292. Total energy = 2692.7590 kcal/mol (2692.4621 without restraints) Performing minimization step: 293. Total energy = 2690.2485 kcal/mol (2689.9528 without restraints) Performing minimization step: 294. Total energy = 2687.7486 kcal/mol (2687.4541 without restraints) Performing minimization step: 295. Total energy = 2685.2591 kcal/mol (2684.9659 without restraints) Performing minimization step: 296. Total energy = 2682.7801 kcal/mol (2682.4881 without restraints) Performing minimization step: 297. Total energy = 2680.3114 kcal/mol (2680.0206 without restraints) Performing minimization step: 298. Total energy = 2677.8531 kcal/mol (2677.5635 without restraints) Performing minimization step: 299. Total energy = 2675.4049 kcal/mol (2675.1164 without restraints) Performing minimization step: 300. Total energy = 2672.9670 kcal/mol (2672.6799 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e90c65df/tmp/ENST00000666628_refx/ENST00000666628_refx.pdb ...Done. Performing minimization step: 301. Total energy = 2670.5392 kcal/mol (2670.2532 without restraints) Performing minimization step: 302. Total energy = 2668.1213 kcal/mol (2667.8365 without restraints) Performing minimization step: 303. Total energy = 2665.7134 kcal/mol (2665.4298 without restraints) Performing minimization step: 304. Total energy = 2663.3155 kcal/mol (2663.0330 without restraints) Performing minimization step: 305. Total energy = 2660.9274 kcal/mol (2660.6461 without restraints) Performing minimization step: 306. Total energy = 2658.5493 kcal/mol (2658.2691 without restraints) Performing minimization step: 307. Total energy = 2656.1807 kcal/mol (2655.9017 without restraints) Performing minimization step: 308. Total energy = 2653.8215 kcal/mol (2653.5436 without restraints) Performing minimization step: 309. Total energy = 2651.4723 kcal/mol (2651.1957 without restraints) Performing minimization step: 310. Total energy = 2649.1326 kcal/mol (2648.8570 without restraints) Performing minimization step: 311. Total energy = 2646.8024 kcal/mol (2646.5280 without restraints) Performing minimization step: 312. Total energy = 2644.4816 kcal/mol (2644.2082 without restraints) Performing minimization step: 313. Total energy = 2642.1701 kcal/mol (2641.8978 without restraints) Performing minimization step: 314. Total energy = 2639.8678 kcal/mol (2639.5966 without restraints) Performing minimization step: 315. Total energy = 2637.5749 kcal/mol (2637.3048 without restraints) Performing minimization step: 316. Total energy = 2635.2911 kcal/mol (2635.0220 without restraints) Performing minimization step: 317. Total energy = 2633.0164 kcal/mol (2632.7485 without restraints) Performing minimization step: 318. Total energy = 2630.7510 kcal/mol (2630.4842 without restraints) Performing minimization step: 319. Total energy = 2628.4945 kcal/mol (2628.2287 without restraints) Performing minimization step: 320. Total energy = 2626.2470 kcal/mol (2625.9824 without restraints) Performing minimization step: 321. Total energy = 2624.0084 kcal/mol (2623.7447 without restraints) Performing minimization step: 322. Total energy = 2621.7787 kcal/mol (2621.5160 without restraints) Performing minimization step: 323. Total energy = 2619.5577 kcal/mol (2619.2960 without restraints) Performing minimization step: 324. Total energy = 2617.3456 kcal/mol (2617.0850 without restraints) Performing minimization step: 325. Total energy = 2615.1421 kcal/mol (2614.8825 without restraints) Performing minimization step: 326. Total energy = 2612.9472 kcal/mol (2612.6887 without restraints) Performing minimization step: 327. Total energy = 2610.7610 kcal/mol (2610.5035 without restraints) Performing minimization step: 328. Total energy = 2608.5835 kcal/mol (2608.3270 without restraints) Performing minimization step: 329. Total energy = 2606.4147 kcal/mol (2606.1592 without restraints) Performing minimization step: 330. Total energy = 2604.2540 kcal/mol (2603.9994 without restraints) Performing minimization step: 331. Total energy = 2602.1017 kcal/mol (2601.8481 without restraints) Performing minimization step: 332. Total energy = 2599.9578 kcal/mol (2599.7052 without restraints) Performing minimization step: 333. Total energy = 2597.8222 kcal/mol (2597.5706 without restraints) Performing minimization step: 334. Total energy = 2595.6949 kcal/mol (2595.4443 without restraints) Performing minimization step: 335. Total energy = 2593.5760 kcal/mol (2593.3264 without restraints) Performing minimization step: 336. Total energy = 2591.4652 kcal/mol (2591.2165 without restraints) Performing minimization step: 337. Total energy = 2589.3624 kcal/mol (2589.1147 without restraints) Performing minimization step: 338. Total energy = 2587.2682 kcal/mol (2587.0214 without restraints) Performing minimization step: 339. Total energy = 2585.1816 kcal/mol (2584.9358 without restraints) Performing minimization step: 340. Total energy = 2583.1030 kcal/mol (2582.8582 without restraints) Performing minimization step: 341. Total energy = 2581.0325 kcal/mol (2580.7885 without restraints) Performing minimization step: 342. Total energy = 2578.9698 kcal/mol (2578.7267 without restraints) Performing minimization step: 343. Total energy = 2576.9149 kcal/mol (2576.6728 without restraints) Performing minimization step: 344. Total energy = 2574.8682 kcal/mol (2574.6272 without restraints) Performing minimization step: 345. Total energy = 2572.8290 kcal/mol (2572.5888 without restraints) Performing minimization step: 346. Total energy = 2570.7977 kcal/mol (2570.5583 without restraints) Performing minimization step: 347. Total energy = 2568.7739 kcal/mol (2568.5355 without restraints) Performing minimization step: 348. Total energy = 2566.7579 kcal/mol (2566.5205 without restraints) Performing minimization step: 349. Total energy = 2564.7495 kcal/mol (2564.5129 without restraints) Performing minimization step: 350. Total energy = 2562.7487 kcal/mol (2562.5130 without restraints) Performing minimization step: 351. Total energy = 2560.7555 kcal/mol (2560.5206 without restraints) Performing minimization step: 352. Total energy = 2558.7697 kcal/mol (2558.5358 without restraints) Performing minimization step: 353. Total energy = 2556.7913 kcal/mol (2556.5581 without restraints) Performing minimization step: 354. Total energy = 2554.8202 kcal/mol (2554.5880 without restraints) Performing minimization step: 355. Total energy = 2552.8567 kcal/mol (2552.6254 without restraints) Performing minimization step: 356. Total energy = 2550.9008 kcal/mol (2550.6704 without restraints) Performing minimization step: 357. Total energy = 2548.9519 kcal/mol (2548.7223 without restraints) Performing minimization step: 358. Total energy = 2547.0107 kcal/mol (2546.7820 without restraints) Performing minimization step: 359. Total energy = 2545.0766 kcal/mol (2544.8487 without restraints) Performing minimization step: 360. Total energy = 2543.1497 kcal/mol (2542.9227 without restraints) Performing minimization step: 361. Total energy = 2541.2303 kcal/mol (2541.0042 without restraints) Performing minimization step: 362. Total energy = 2539.3178 kcal/mol (2539.0925 without restraints) Performing minimization step: 363. Total energy = 2537.4123 kcal/mol (2537.1878 without restraints) Performing minimization step: 364. Total energy = 2535.5138 kcal/mol (2535.2902 without restraints) Performing minimization step: 365. Total energy = 2533.6225 kcal/mol (2533.3997 without restraints) Performing minimization step: 366. Total energy = 2531.7383 kcal/mol (2531.5163 without restraints) Performing minimization step: 367. Total energy = 2529.8610 kcal/mol (2529.6399 without restraints) Performing minimization step: 368. Total energy = 2527.9908 kcal/mol (2527.7704 without restraints) Performing minimization step: 369. Total energy = 2526.1272 kcal/mol (2525.9077 without restraints) Performing minimization step: 370. Total energy = 2524.2707 kcal/mol (2524.0520 without restraints) Performing minimization step: 371. Total energy = 2522.4213 kcal/mol (2522.2034 without restraints) Performing minimization step: 372. Total energy = 2520.5786 kcal/mol (2520.3615 without restraints) Performing minimization step: 373. Total energy = 2518.7424 kcal/mol (2518.5261 without restraints) Performing minimization step: 374. Total energy = 2516.9131 kcal/mol (2516.6975 without restraints) Performing minimization step: 375. Total energy = 2515.0906 kcal/mol (2514.8759 without restraints) Performing minimization step: 376. Total energy = 2513.2749 kcal/mol (2513.0610 without restraints) Performing minimization step: 377. Total energy = 2511.4659 kcal/mol (2511.2528 without restraints) Performing minimization step: 378. Total energy = 2509.6636 kcal/mol (2509.4513 without restraints) Performing minimization step: 379. Total energy = 2507.8680 kcal/mol (2507.6564 without restraints) Performing minimization step: 380. Total energy = 2506.0789 kcal/mol (2505.8682 without restraints) Performing minimization step: 381. Total energy = 2504.2963 kcal/mol (2504.0862 without restraints) Performing minimization step: 382. Total energy = 2502.5200 kcal/mol (2502.3105 without restraints) Performing minimization step: 383. Total energy = 2500.7503 kcal/mol (2500.5418 without restraints) Performing minimization step: 384. Total energy = 2498.9874 kcal/mol (2498.7797 without restraints) Performing minimization step: 385. Total energy = 2497.2308 kcal/mol (2497.0239 without restraints) Performing minimization step: 386. Total energy = 2495.4807 kcal/mol (2495.2745 without restraints) Performing minimization step: 387. Total energy = 2493.7367 kcal/mol (2493.5313 without restraints) Performing minimization step: 388. Total energy = 2491.9995 kcal/mol (2491.7948 without restraints) Performing minimization step: 389. Total energy = 2490.2685 kcal/mol (2490.0646 without restraints) Performing minimization step: 390. Total energy = 2488.5437 kcal/mol (2488.3405 without restraints) Performing minimization step: 391. Total energy = 2486.8253 kcal/mol (2486.6228 without restraints) Performing minimization step: 392. Total energy = 2485.1133 kcal/mol (2484.9116 without restraints) Performing minimization step: 393. Total energy = 2483.4075 kcal/mol (2483.2066 without restraints) Performing minimization step: 394. Total energy = 2481.7080 kcal/mol (2481.5078 without restraints) Performing minimization step: 395. Total energy = 2480.0148 kcal/mol (2479.8154 without restraints) Performing minimization step: 396. Total energy = 2478.3278 kcal/mol (2478.1290 without restraints) Performing minimization step: 397. Total energy = 2476.6469 kcal/mol (2476.4489 without restraints) Performing minimization step: 398. Total energy = 2474.9722 kcal/mol (2474.7749 without restraints) Performing minimization step: 399. Total energy = 2473.3035 kcal/mol (2473.1069 without restraints) Performing minimization step: 400. Total energy = 2471.6410 kcal/mol (2471.4451 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e90c65df/tmp/ENST00000666628_refx/ENST00000666628_refx.pdb ...Done. Performing minimization step: 401. Total energy = 2469.9844 kcal/mol (2469.7893 without restraints) Performing minimization step: 402. Total energy = 2468.3339 kcal/mol (2468.1395 without restraints) Performing minimization step: 403. Total energy = 2466.6895 kcal/mol (2466.4957 without restraints) Performing minimization step: 404. Total energy = 2465.0514 kcal/mol (2464.8583 without restraints) Performing minimization step: 405. Total energy = 2463.4191 kcal/mol (2463.2267 without restraints) Performing minimization step: 406. Total energy = 2461.7925 kcal/mol (2461.6008 without restraints) Performing minimization step: 407. Total energy = 2460.1718 kcal/mol (2459.9809 without restraints) Performing minimization step: 408. Total energy = 2458.5569 kcal/mol (2458.3666 without restraints) Performing minimization step: 409. Total energy = 2456.9480 kcal/mol (2456.7585 without restraints) Performing minimization step: 410. Total energy = 2455.3455 kcal/mol (2455.1566 without restraints) Performing minimization step: 411. Total energy = 2453.7484 kcal/mol (2453.5602 without restraints) Performing minimization step: 412. Total energy = 2452.1571 kcal/mol (2451.9696 without restraints) Performing minimization step: 413. Total energy = 2450.5717 kcal/mol (2450.3849 without restraints) Performing minimization step: 414. Total energy = 2448.9921 kcal/mol (2448.8060 without restraints) Performing minimization step: 415. Total energy = 2447.4179 kcal/mol (2447.2325 without restraints) Performing minimization step: 416. Total energy = 2445.8497 kcal/mol (2445.6649 without restraints) Performing minimization step: 417. Total energy = 2444.2872 kcal/mol (2444.1031 without restraints) Performing minimization step: 418. Total energy = 2442.7303 kcal/mol (2442.5469 without restraints) Performing minimization step: 419. Total energy = 2441.1792 kcal/mol (2440.9964 without restraints) Performing minimization step: 420. Total energy = 2439.6337 kcal/mol (2439.4516 without restraints) Performing minimization step: 421. Total energy = 2438.0938 kcal/mol (2437.9124 without restraints) Performing minimization step: 422. Total energy = 2436.5595 kcal/mol (2436.3788 without restraints) Performing minimization step: 423. Total energy = 2435.0309 kcal/mol (2434.8508 without restraints) Performing minimization step: 424. Total energy = 2433.5078 kcal/mol (2433.3284 without restraints) Performing minimization step: 425. Total energy = 2431.9903 kcal/mol (2431.8115 without restraints) Performing minimization step: 426. Total energy = 2430.4787 kcal/mol (2430.3006 without restraints) Performing minimization step: 427. Total energy = 2428.9723 kcal/mol (2428.7948 without restraints) Performing minimization step: 428. Total energy = 2427.4711 kcal/mol (2427.2942 without restraints) Performing minimization step: 429. Total energy = 2425.9756 kcal/mol (2425.7994 without restraints) Performing minimization step: 430. Total energy = 2424.4855 kcal/mol (2424.3100 without restraints) Performing minimization step: 431. Total energy = 2423.0009 kcal/mol (2422.8260 without restraints) Performing minimization step: 432. Total energy = 2421.5217 kcal/mol (2421.3474 without restraints) Performing minimization step: 433. Total energy = 2420.0476 kcal/mol (2419.8739 without restraints) Performing minimization step: 434. Total energy = 2418.5792 kcal/mol (2418.4062 without restraints) Performing minimization step: 435. Total energy = 2417.1159 kcal/mol (2416.9436 without restraints) Performing minimization step: 436. Total energy = 2415.6580 kcal/mol (2415.4863 without restraints) Performing minimization step: 437. Total energy = 2414.2056 kcal/mol (2414.0345 without restraints) Performing minimization step: 438. Total energy = 2412.7586 kcal/mol (2412.5881 without restraints) Performing minimization step: 439. Total energy = 2411.3168 kcal/mol (2411.1469 without restraints) Performing minimization step: 440. Total energy = 2409.8803 kcal/mol (2409.7110 without restraints) Performing minimization step: 441. Total energy = 2408.4493 kcal/mol (2408.2807 without restraints) Performing minimization step: 442. Total energy = 2407.0234 kcal/mol (2406.8555 without restraints) Performing minimization step: 443. Total energy = 2405.6023 kcal/mol (2405.4350 without restraints) Performing minimization step: 444. Total energy = 2404.1868 kcal/mol (2404.0200 without restraints) Performing minimization step: 445. Total energy = 2402.7761 kcal/mol (2402.6099 without restraints) Performing minimization step: 446. Total energy = 2401.3708 kcal/mol (2401.2053 without restraints) Performing minimization step: 447. Total energy = 2399.9707 kcal/mol (2399.8058 without restraints) Performing minimization step: 448. Total energy = 2398.5757 kcal/mol (2398.4113 without restraints) Performing minimization step: 449. Total energy = 2397.1856 kcal/mol (2397.0219 without restraints) Performing minimization step: 450. Total energy = 2395.8008 kcal/mol (2395.6377 without restraints) Performing minimization step: 451. Total energy = 2394.4212 kcal/mol (2394.2586 without restraints) Performing minimization step: 452. Total energy = 2393.0467 kcal/mol (2392.8847 without restraints) Performing minimization step: 453. Total energy = 2391.6770 kcal/mol (2391.5156 without restraints) Performing minimization step: 454. Total energy = 2390.3123 kcal/mol (2390.1516 without restraints) Performing minimization step: 455. Total energy = 2388.9528 kcal/mol (2388.7926 without restraints) Performing minimization step: 456. Total energy = 2387.5985 kcal/mol (2387.4390 without restraints) Performing minimization step: 457. Total energy = 2386.2490 kcal/mol (2386.0900 without restraints) Performing minimization step: 458. Total energy = 2384.9044 kcal/mol (2384.7459 without restraints) Performing minimization step: 459. Total energy = 2383.5645 kcal/mol (2383.4066 without restraints) Performing minimization step: 460. Total energy = 2382.2297 kcal/mol (2382.0724 without restraints) Performing minimization step: 461. Total energy = 2380.8996 kcal/mol (2380.7429 without restraints) Performing minimization step: 462. Total energy = 2379.5748 kcal/mol (2379.4187 without restraints) Performing minimization step: 463. Total energy = 2378.2547 kcal/mol (2378.0992 without restraints) Performing minimization step: 464. Total energy = 2376.9391 kcal/mol (2376.7842 without restraints) Performing minimization step: 465. Total energy = 2375.6287 kcal/mol (2375.4743 without restraints) Performing minimization step: 466. Total energy = 2374.3234 kcal/mol (2374.1695 without restraints) Performing minimization step: 467. Total energy = 2373.0226 kcal/mol (2372.8694 without restraints) Performing minimization step: 468. Total energy = 2371.7267 kcal/mol (2371.5740 without restraints) Performing minimization step: 469. Total energy = 2370.4357 kcal/mol (2370.2836 without restraints) Performing minimization step: 470. Total energy = 2369.1495 kcal/mol (2368.9980 without restraints) Performing minimization step: 471. Total energy = 2367.8681 kcal/mol (2367.7171 without restraints) Performing minimization step: 472. Total energy = 2366.5912 kcal/mol (2366.4409 without restraints) Performing minimization step: 473. Total energy = 2365.3192 kcal/mol (2365.1693 without restraints) Performing minimization step: 474. Total energy = 2364.0514 kcal/mol (2363.9021 without restraints) Performing minimization step: 475. Total energy = 2362.7888 kcal/mol (2362.6401 without restraints) Performing minimization step: 476. Total energy = 2361.5307 kcal/mol (2361.3824 without restraints) Performing minimization step: 477. Total energy = 2360.2776 kcal/mol (2360.1300 without restraints) Performing minimization step: 478. Total energy = 2359.0288 kcal/mol (2358.8817 without restraints) Performing minimization step: 479. Total energy = 2357.7848 kcal/mol (2357.6382 without restraints) Performing minimization step: 480. Total energy = 2356.5452 kcal/mol (2356.3991 without restraints) Performing minimization step: 481. Total energy = 2355.3103 kcal/mol (2355.1648 without restraints) Performing minimization step: 482. Total energy = 2354.0798 kcal/mol (2353.9348 without restraints) Performing minimization step: 483. Total energy = 2352.8539 kcal/mol (2352.7094 without restraints) Performing minimization step: 484. Total energy = 2351.6325 kcal/mol (2351.4886 without restraints) Performing minimization step: 485. Total energy = 2350.4156 kcal/mol (2350.2723 without restraints) Performing minimization step: 486. Total energy = 2349.2033 kcal/mol (2349.0605 without restraints) Performing minimization step: 487. Total energy = 2347.9954 kcal/mol (2347.8532 without restraints) Performing minimization step: 488. Total energy = 2346.7920 kcal/mol (2346.6503 without restraints) Performing minimization step: 489. Total energy = 2345.5931 kcal/mol (2345.4519 without restraints) Performing minimization step: 490. Total energy = 2344.3987 kcal/mol (2344.2580 without restraints) Performing minimization step: 491. Total energy = 2343.2087 kcal/mol (2343.0685 without restraints) Performing minimization step: 492. Total energy = 2342.0229 kcal/mol (2341.8832 without restraints) Performing minimization step: 493. Total energy = 2340.8418 kcal/mol (2340.7026 without restraints) Performing minimization step: 494. Total energy = 2339.6650 kcal/mol (2339.5263 without restraints) Performing minimization step: 495. Total energy = 2338.4926 kcal/mol (2338.3544 without restraints) Performing minimization step: 496. Total energy = 2337.3247 kcal/mol (2337.1872 without restraints) Performing minimization step: 497. Total energy = 2336.1611 kcal/mol (2336.0240 without restraints) Performing minimization step: 498. Total energy = 2335.0018 kcal/mol (2334.8652 without restraints) Performing minimization step: 499. Total energy = 2333.8466 kcal/mol (2333.7103 without restraints) Performing minimization step: 500. Total energy = 2332.6956 kcal/mol (2332.5600 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e90c65df/tmp/ENST00000666628_refx/ENST00000666628_refx.pdb ...Done. Performing minimization step: 501. Total energy = 2331.5492 kcal/mol (2331.4141 without restraints) Performing minimization step: 502. Total energy = 2330.4071 kcal/mol (2330.2725 without restraints) Performing minimization step: 503. Total energy = 2329.2690 kcal/mol (2329.1350 without restraints) Performing minimization step: 504. Total energy = 2328.1356 kcal/mol (2328.0020 without restraints) Performing minimization step: 505. Total energy = 2327.0063 kcal/mol (2326.8734 without restraints) Performing minimization step: 506. Total energy = 2325.8812 kcal/mol (2325.7487 without restraints) Performing minimization step: 507. Total energy = 2324.7603 kcal/mol (2324.6283 without restraints) Performing minimization step: 508. Total energy = 2323.6436 kcal/mol (2323.5122 without restraints) Performing minimization step: 509. Total energy = 2322.5314 kcal/mol (2322.4003 without restraints) Performing minimization step: 510. Total energy = 2321.4231 kcal/mol (2321.2925 without restraints) Performing minimization step: 511. Total energy = 2320.3188 kcal/mol (2320.1887 without restraints) Performing minimization step: 512. Total energy = 2319.2188 kcal/mol (2319.0892 without restraints) Performing minimization step: 513. Total energy = 2318.1227 kcal/mol (2317.9936 without restraints) Performing minimization step: 514. Total energy = 2317.0303 kcal/mol (2316.9017 without restraints) Performing minimization step: 515. Total energy = 2315.9425 kcal/mol (2315.8143 without restraints) Performing minimization step: 516. Total energy = 2314.8587 kcal/mol (2314.7311 without restraints) Performing minimization step: 517. Total energy = 2313.7790 kcal/mol (2313.6518 without restraints) Performing minimization step: 518. Total energy = 2312.7033 kcal/mol (2312.5766 without restraints) Performing minimization step: 519. Total energy = 2311.6317 kcal/mol (2311.5054 without restraints) Performing minimization step: 520. Total energy = 2310.5642 kcal/mol (2310.4383 without restraints) Performing minimization step: 521. Total energy = 2309.5008 kcal/mol (2309.3755 without restraints) Performing minimization step: 522. Total energy = 2308.4413 kcal/mol (2308.3166 without restraints) Performing minimization step: 523. Total energy = 2307.3858 kcal/mol (2307.2614 without restraints) Performing minimization step: 524. Total energy = 2306.3338 kcal/mol (2306.2099 without restraints) Performing minimization step: 525. Total energy = 2305.2862 kcal/mol (2305.1628 without restraints) Performing minimization step: 526. Total energy = 2304.2423 kcal/mol (2304.1192 without restraints) Performing minimization step: 527. Total energy = 2303.2024 kcal/mol (2303.0799 without restraints) Performing minimization step: 528. Total energy = 2302.1664 kcal/mol (2302.0444 without restraints) Performing minimization step: 529. Total energy = 2301.1344 kcal/mol (2301.0128 without restraints) Performing minimization step: 530. Total energy = 2300.1064 kcal/mol (2299.9853 without restraints) Performing minimization step: 531. Total energy = 2299.0819 kcal/mol (2298.9610 without restraints) Performing minimization step: 532. Total energy = 2298.0613 kcal/mol (2297.9411 without restraints) Performing minimization step: 533. Total energy = 2297.0445 kcal/mol (2296.9247 without restraints) Performing minimization step: 534. Total energy = 2296.0318 kcal/mol (2295.9125 without restraints) Performing minimization step: 535. Total energy = 2295.0228 kcal/mol (2294.9039 without restraints) Performing minimization step: 536. Total energy = 2294.0176 kcal/mol (2293.8992 without restraints) Performing minimization step: 537. Total energy = 2293.0161 kcal/mol (2292.8981 without restraints) Performing minimization step: 538. Total energy = 2292.0185 kcal/mol (2291.9010 without restraints) Performing minimization step: 539. Total energy = 2291.0248 kcal/mol (2290.9077 without restraints) Performing minimization step: 540. Total energy = 2290.0349 kcal/mol (2289.9183 without restraints) Performing minimization step: 541. Total energy = 2289.0486 kcal/mol (2288.9324 without restraints) Performing minimization step: 542. Total energy = 2288.0660 kcal/mol (2287.9503 without restraints) Performing minimization step: 543. Total energy = 2287.0872 kcal/mol (2286.9718 without restraints) Performing minimization step: 544. Total energy = 2286.1119 kcal/mol (2285.9971 without restraints) Performing minimization step: 545. Total energy = 2285.1404 kcal/mol (2285.0260 without restraints) Performing minimization step: 546. Total energy = 2284.1727 kcal/mol (2284.0588 without restraints) Performing minimization step: 547. Total energy = 2283.2087 kcal/mol (2283.0951 without restraints) Performing minimization step: 548. Total energy = 2282.2481 kcal/mol (2282.1349 without restraints) Performing minimization step: 549. Total energy = 2281.2914 kcal/mol (2281.1786 without restraints) Performing minimization step: 550. Total energy = 2280.3382 kcal/mol (2280.2259 without restraints) Performing minimization step: 551. Total energy = 2279.3885 kcal/mol (2279.2766 without restraints) Performing minimization step: 552. Total energy = 2278.4422 kcal/mol (2278.3308 without restraints) Performing minimization step: 553. Total energy = 2277.4998 kcal/mol (2277.3889 without restraints) Performing minimization step: 554. Total energy = 2276.5610 kcal/mol (2276.4504 without restraints) Performing minimization step: 555. Total energy = 2275.6257 kcal/mol (2275.5155 without restraints) Performing minimization step: 556. Total energy = 2274.6938 kcal/mol (2274.5840 without restraints) Performing minimization step: 557. Total energy = 2273.7653 kcal/mol (2273.6559 without restraints) Performing minimization step: 558. Total energy = 2272.8405 kcal/mol (2272.7317 without restraints) Performing minimization step: 559. Total energy = 2271.9192 kcal/mol (2271.8107 without restraints) Performing minimization step: 560. Total energy = 2271.0015 kcal/mol (2270.8933 without restraints) Performing minimization step: 561. Total energy = 2270.0875 kcal/mol (2269.9799 without restraints) Performing minimization step: 562. Total energy = 2269.1769 kcal/mol (2269.0696 without restraints) Performing minimization step: 563. Total energy = 2268.2696 kcal/mol (2268.1628 without restraints) Performing minimization step: 564. Total energy = 2267.3658 kcal/mol (2267.2593 without restraints) Performing minimization step: 565. Total energy = 2266.4651 kcal/mol (2266.3590 without restraints) Performing minimization step: 566. Total energy = 2265.5678 kcal/mol (2265.4621 without restraints) Performing minimization step: 567. Total energy = 2264.6740 kcal/mol (2264.5687 without restraints) Performing minimization step: 568. Total energy = 2263.7837 kcal/mol (2263.6788 without restraints) Performing minimization step: 569. Total energy = 2262.8967 kcal/mol (2262.7922 without restraints) Performing minimization step: 570. Total energy = 2262.0128 kcal/mol (2261.9087 without restraints) Performing minimization step: 571. Total energy = 2261.1326 kcal/mol (2261.0289 without restraints) Performing minimization step: 572. Total energy = 2260.2558 kcal/mol (2260.1526 without restraints) Performing minimization step: 573. Total energy = 2259.3823 kcal/mol (2259.2793 without restraints) Performing minimization step: 574. Total energy = 2258.5118 kcal/mol (2258.4092 without restraints) Performing minimization step: 575. Total energy = 2257.6448 kcal/mol (2257.5427 without restraints) Performing minimization step: 576. Total energy = 2256.7811 kcal/mol (2256.6794 without restraints) Performing minimization step: 577. Total energy = 2255.9206 kcal/mol (2255.8192 without restraints) Performing minimization step: 578. Total energy = 2255.0634 kcal/mol (2254.9624 without restraints) Performing minimization step: 579. Total energy = 2254.2093 kcal/mol (2254.1087 without restraints) Performing minimization step: 580. Total energy = 2253.3584 kcal/mol (2253.2581 without restraints) Performing minimization step: 581. Total energy = 2252.5109 kcal/mol (2252.4110 without restraints) Performing minimization step: 582. Total energy = 2251.6669 kcal/mol (2251.5676 without restraints) Performing minimization step: 583. Total energy = 2250.8260 kcal/mol (2250.7269 without restraints) Performing minimization step: 584. Total energy = 2249.9883 kcal/mol (2249.8897 without restraints) Performing minimization step: 585. Total energy = 2249.1539 kcal/mol (2249.0557 without restraints) Performing minimization step: 586. Total energy = 2248.3226 kcal/mol (2248.2246 without restraints) Performing minimization step: 587. Total energy = 2247.4943 kcal/mol (2247.3967 without restraints) Performing minimization step: 588. Total energy = 2246.6691 kcal/mol (2246.5719 without restraints) Performing minimization step: 589. Total energy = 2245.8468 kcal/mol (2245.7499 without restraints) Performing minimization step: 590. Total energy = 2245.0278 kcal/mol (2244.9314 without restraints) Performing minimization step: 591. Total energy = 2244.2120 kcal/mol (2244.1159 without restraints) Performing minimization step: 592. Total energy = 2243.3996 kcal/mol (2243.3039 without restraints) Performing minimization step: 593. Total energy = 2242.5900 kcal/mol (2242.4946 without restraints) Performing minimization step: 594. Total energy = 2241.7834 kcal/mol (2241.6884 without restraints) Performing minimization step: 595. Total energy = 2240.9797 kcal/mol (2240.8850 without restraints) Performing minimization step: 596. Total energy = 2240.1791 kcal/mol (2240.0848 without restraints) Performing minimization step: 597. Total energy = 2239.3817 kcal/mol (2239.2878 without restraints) Performing minimization step: 598. Total energy = 2238.5871 kcal/mol (2238.4935 without restraints) Performing minimization step: 599. Total energy = 2237.7957 kcal/mol (2237.7025 without restraints) Performing minimization step: 600. Total energy = 2237.0073 kcal/mol (2236.9144 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e90c65df/tmp/ENST00000666628_refx/ENST00000666628_refx.pdb ...Done. Performing minimization step: 601. Total energy = 2236.2219 kcal/mol (2236.1294 without restraints) Performing minimization step: 602. Total energy = 2235.4395 kcal/mol (2235.3473 without restraints) Performing minimization step: 603. Total energy = 2234.6598 kcal/mol (2234.5679 without restraints) Performing minimization step: 604. Total energy = 2233.8834 kcal/mol (2233.7918 without restraints) Performing minimization step: 605. Total energy = 2233.1097 kcal/mol (2233.0184 without restraints) Performing minimization step: 606. Total energy = 2232.3391 kcal/mol (2232.2483 without restraints) Performing minimization step: 607. Total energy = 2231.5715 kcal/mol (2231.4811 without restraints) Performing minimization step: 608. Total energy = 2230.8065 kcal/mol (2230.7165 without restraints) Performing minimization step: 609. Total energy = 2230.0447 kcal/mol (2229.9549 without restraints) Performing minimization step: 610. Total energy = 2229.2857 kcal/mol (2229.1962 without restraints) Performing minimization step: 611. Total energy = 2228.5292 kcal/mol (2228.4401 without restraints) Performing minimization step: 612. Total energy = 2227.7757 kcal/mol (2227.6869 without restraints) Performing minimization step: 613. Total energy = 2227.0250 kcal/mol (2226.9366 without restraints) Performing minimization step: 614. Total energy = 2226.2774 kcal/mol (2226.1893 without restraints) Performing minimization step: 615. Total energy = 2225.5329 kcal/mol (2225.4451 without restraints) Performing minimization step: 616. Total energy = 2224.7909 kcal/mol (2224.7034 without restraints) Performing minimization step: 617. Total energy = 2224.0517 kcal/mol (2223.9646 without restraints) Performing minimization step: 618. Total energy = 2223.3151 kcal/mol (2223.2284 without restraints) Performing minimization step: 619. Total energy = 2222.5815 kcal/mol (2222.4950 without restraints) Performing minimization step: 620. Total energy = 2221.8509 kcal/mol (2221.7648 without restraints) Performing minimization step: 621. Total energy = 2221.1228 kcal/mol (2221.0370 without restraints) Performing minimization step: 622. Total energy = 2220.3975 kcal/mol (2220.3121 without restraints) Performing minimization step: 623. Total energy = 2219.6751 kcal/mol (2219.5900 without restraints) Performing minimization step: 624. Total energy = 2218.9552 kcal/mol (2218.8704 without restraints) Performing minimization step: 625. Total energy = 2218.2382 kcal/mol (2218.1537 without restraints) Performing minimization step: 626. Total energy = 2217.5240 kcal/mol (2217.4398 without restraints) Performing minimization step: 627. Total energy = 2216.8122 kcal/mol (2216.7283 without restraints) Performing minimization step: 628. Total energy = 2216.1031 kcal/mol (2216.0195 without restraints) Performing minimization step: 629. Total energy = 2215.3969 kcal/mol (2215.3136 without restraints) Performing minimization step: 630. Total energy = 2214.6931 kcal/mol (2214.6102 without restraints) Performing minimization step: 631. Total energy = 2213.9920 kcal/mol (2213.9094 without restraints) Performing minimization step: 632. Total energy = 2213.2935 kcal/mol (2213.2112 without restraints) Performing minimization step: 633. Total energy = 2212.5979 kcal/mol (2212.5159 without restraints) Performing minimization step: 634. Total energy = 2211.9044 kcal/mol (2211.8227 without restraints) Performing minimization step: 635. Total energy = 2211.2138 kcal/mol (2211.1324 without restraints) Performing minimization step: 636. Total energy = 2210.5260 kcal/mol (2210.4449 without restraints) Performing minimization step: 637. Total energy = 2209.8406 kcal/mol (2209.7598 without restraints) Performing minimization step: 638. Total energy = 2209.1578 kcal/mol (2209.0772 without restraints) Performing minimization step: 639. Total energy = 2208.4773 kcal/mol (2208.3972 without restraints) Performing minimization step: 640. Total energy = 2207.7995 kcal/mol (2207.7197 without restraints) Performing minimization step: 641. Total energy = 2207.1243 kcal/mol (2207.0448 without restraints) Performing minimization step: 642. Total energy = 2206.4518 kcal/mol (2206.3725 without restraints) Performing minimization step: 643. Total energy = 2205.7816 kcal/mol (2205.7026 without restraints) Performing minimization step: 644. Total energy = 2205.1140 kcal/mol (2205.0355 without restraints) Performing minimization step: 645. Total energy = 2204.4490 kcal/mol (2204.3706 without restraints) Performing minimization step: 646. Total energy = 2203.7863 kcal/mol (2203.7082 without restraints) Performing minimization step: 647. Total energy = 2203.1260 kcal/mol (2203.0482 without restraints) Performing minimization step: 648. Total energy = 2202.4683 kcal/mol (2202.3909 without restraints) Performing minimization step: 649. Total energy = 2201.8130 kcal/mol (2201.7358 without restraints) Performing minimization step: 650. Total energy = 2201.1601 kcal/mol (2201.0832 without restraints) Performing minimization step: 651. Total energy = 2200.5097 kcal/mol (2200.4331 without restraints) Performing minimization step: 652. Total energy = 2199.8617 kcal/mol (2199.7853 without restraints) Performing minimization step: 653. Total energy = 2199.2159 kcal/mol (2199.1398 without restraints) Performing minimization step: 654. Total energy = 2198.5725 kcal/mol (2198.4967 without restraints) Performing minimization step: 655. Total energy = 2197.9315 kcal/mol (2197.8560 without restraints) Performing minimization step: 656. Total energy = 2197.2928 kcal/mol (2197.2175 without restraints) Performing minimization step: 657. Total energy = 2196.6567 kcal/mol (2196.5817 without restraints) Performing minimization step: 658. Total energy = 2196.0229 kcal/mol (2195.9483 without restraints) Performing minimization step: 659. Total energy = 2195.3915 kcal/mol (2195.3171 without restraints) Performing minimization step: 660. Total energy = 2194.7623 kcal/mol (2194.6882 without restraints) Performing minimization step: 661. Total energy = 2194.1357 kcal/mol (2194.0619 without restraints) Performing minimization step: 662. Total energy = 2193.5113 kcal/mol (2193.4378 without restraints) Performing minimization step: 663. Total energy = 2192.8893 kcal/mol (2192.8160 without restraints) Performing minimization step: 664. Total energy = 2192.2694 kcal/mol (2192.1964 without restraints) Performing minimization step: 665. Total energy = 2191.6519 kcal/mol (2191.5791 without restraints) Performing minimization step: 666. Total energy = 2191.0368 kcal/mol (2190.9643 without restraints) Performing minimization step: 667. Total energy = 2190.4238 kcal/mol (2190.3516 without restraints) Performing minimization step: 668. Total energy = 2189.8132 kcal/mol (2189.7413 without restraints) Performing minimization step: 669. Total energy = 2189.2043 kcal/mol (2189.1326 without restraints) Performing minimization step: 670. Total energy = 2188.5981 kcal/mol (2188.5268 without restraints) Performing minimization step: 671. Total energy = 2187.9942 kcal/mol (2187.9230 without restraints) Performing minimization step: 672. Total energy = 2187.3923 kcal/mol (2187.3214 without restraints) Performing minimization step: 673. Total energy = 2186.7930 kcal/mol (2186.7223 without restraints) Performing minimization step: 674. Total energy = 2186.1957 kcal/mol (2186.1253 without restraints) Performing minimization step: 675. Total energy = 2185.6005 kcal/mol (2185.5304 without restraints) Performing minimization step: 676. Total energy = 2185.0076 kcal/mol (2184.9378 without restraints) Performing minimization step: 677. Total energy = 2184.4168 kcal/mol (2184.3471 without restraints) Performing minimization step: 678. Total energy = 2183.8280 kcal/mol (2183.7586 without restraints) Performing minimization step: 679. Total energy = 2183.2412 kcal/mol (2183.1720 without restraints) Performing minimization step: 680. Total energy = 2182.6568 kcal/mol (2182.5881 without restraints) Performing minimization step: 681. Total energy = 2182.0748 kcal/mol (2182.0062 without restraints) Performing minimization step: 682. Total energy = 2181.4945 kcal/mol (2181.4262 without restraints) Performing minimization step: 683. Total energy = 2180.9162 kcal/mol (2180.8480 without restraints) Performing minimization step: 684. Total energy = 2180.3404 kcal/mol (2180.2726 without restraints) Performing minimization step: 685. Total energy = 2179.7663 kcal/mol (2179.6987 without restraints) Performing minimization step: 686. Total energy = 2179.1946 kcal/mol (2179.1272 without restraints) Performing minimization step: 687. Total energy = 2178.6246 kcal/mol (2178.5574 without restraints) Performing minimization step: 688. Total energy = 2178.0568 kcal/mol (2177.9899 without restraints) Performing minimization step: 689. Total energy = 2177.4913 kcal/mol (2177.4246 without restraints) Performing minimization step: 690. Total energy = 2176.9278 kcal/mol (2176.8614 without restraints) Performing minimization step: 691. Total energy = 2176.3662 kcal/mol (2176.3000 without restraints) Performing minimization step: 692. Total energy = 2175.8063 kcal/mol (2175.7404 without restraints) Performing minimization step: 693. Total energy = 2175.2486 kcal/mol (2175.1830 without restraints) Performing minimization step: 694. Total energy = 2174.6931 kcal/mol (2174.6276 without restraints) Performing minimization step: 695. Total energy = 2174.1394 kcal/mol (2174.0742 without restraints) Performing minimization step: 696. Total energy = 2173.5877 kcal/mol (2173.5227 without restraints) Performing minimization step: 697. Total energy = 2173.0380 kcal/mol (2172.9733 without restraints) Performing minimization step: 698. Total energy = 2172.4902 kcal/mol (2172.4257 without restraints) Performing minimization step: 699. Total energy = 2171.9440 kcal/mol (2171.8797 without restraints) Performing minimization step: 700. Total energy = 2171.4002 kcal/mol (2171.3361 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e90c65df/tmp/ENST00000666628_refx/ENST00000666628_refx.pdb ...Done. Performing minimization step: 701. Total energy = 2170.8585 kcal/mol (2170.7946 without restraints) Performing minimization step: 702. Total energy = 2170.3185 kcal/mol (2170.2549 without restraints) Performing minimization step: 703. Total energy = 2169.7802 kcal/mol (2169.7168 without restraints) Performing minimization step: 704. Total energy = 2169.2439 kcal/mol (2169.1808 without restraints) Performing minimization step: 705. Total energy = 2168.7096 kcal/mol (2168.6467 without restraints) Performing minimization step: 706. Total energy = 2168.1770 kcal/mol (2168.1142 without restraints) Performing minimization step: 707. Total energy = 2167.6465 kcal/mol (2167.5840 without restraints) Performing minimization step: 708. Total energy = 2167.1176 kcal/mol (2167.0553 without restraints) Performing minimization step: 709. Total energy = 2166.5910 kcal/mol (2166.5289 without restraints) Performing minimization step: 710. Total energy = 2166.0659 kcal/mol (2166.0039 without restraints) Performing minimization step: 711. Total energy = 2165.5425 kcal/mol (2165.4809 without restraints) Performing minimization step: 712. Total energy = 2165.0215 kcal/mol (2164.9600 without restraints) Performing minimization step: 713. Total energy = 2164.5020 kcal/mol (2164.4408 without restraints) Performing minimization step: 714. Total energy = 2163.9843 kcal/mol (2163.9233 without restraints) Performing minimization step: 715. Total energy = 2163.4683 kcal/mol (2163.4075 without restraints) Performing minimization step: 716. Total energy = 2162.9542 kcal/mol (2162.8937 without restraints) Performing minimization step: 717. Total energy = 2162.4420 kcal/mol (2162.3816 without restraints) Performing minimization step: 718. Total energy = 2161.9314 kcal/mol (2161.8712 without restraints) Performing minimization step: 719. Total energy = 2161.4225 kcal/mol (2161.3625 without restraints) Performing minimization step: 720. Total energy = 2160.9157 kcal/mol (2160.8560 without restraints) Performing minimization step: 721. Total energy = 2160.4104 kcal/mol (2160.3510 without restraints) Performing minimization step: 722. Total energy = 2159.9071 kcal/mol (2159.8478 without restraints) Performing minimization step: 723. Total energy = 2159.4053 kcal/mol (2159.3462 without restraints) Performing minimization step: 724. Total energy = 2158.9053 kcal/mol (2158.8464 without restraints) Performing minimization step: 725. Total energy = 2158.4070 kcal/mol (2158.3483 without restraints) Performing minimization step: 726. Total energy = 2157.9105 kcal/mol (2157.8519 without restraints) Performing minimization step: 727. Total energy = 2157.4156 kcal/mol (2157.3573 without restraints) Performing minimization step: 728. Total energy = 2156.9225 kcal/mol (2156.8644 without restraints) Performing minimization step: 729. Total energy = 2156.4309 kcal/mol (2156.3730 without restraints) Performing minimization step: 730. Total energy = 2155.9409 kcal/mol (2155.8831 without restraints) Performing minimization step: 731. Total energy = 2155.4527 kcal/mol (2155.3952 without restraints) Performing minimization step: 732. Total energy = 2154.9664 kcal/mol (2154.9091 without restraints) Performing minimization step: 733. Total energy = 2154.4816 kcal/mol (2154.4244 without restraints) Performing minimization step: 734. Total energy = 2153.9985 kcal/mol (2153.9416 without restraints) Performing minimization step: 735. Total energy = 2153.5169 kcal/mol (2153.4602 without restraints) Performing minimization step: 736. Total energy = 2153.0372 kcal/mol (2152.9807 without restraints) Performing minimization step: 737. Total energy = 2152.5587 kcal/mol (2152.5024 without restraints) Performing minimization step: 738. Total energy = 2152.0820 kcal/mol (2152.0258 without restraints) Performing minimization step: 739. Total energy = 2151.6069 kcal/mol (2151.5509 without restraints) Performing minimization step: 740. Total energy = 2151.1333 kcal/mol (2151.0775 without restraints) Performing minimization step: 741. Total energy = 2150.6614 kcal/mol (2150.6058 without restraints) Performing minimization step: 742. Total energy = 2150.1908 kcal/mol (2150.1352 without restraints) Performing minimization step: 743. Total energy = 2149.7219 kcal/mol (2149.6667 without restraints) Performing minimization step: 744. Total energy = 2149.2547 kcal/mol (2149.1997 without restraints) Performing minimization step: 745. Total energy = 2148.7888 kcal/mol (2148.7339 without restraints) Performing minimization step: 746. Total energy = 2148.3246 kcal/mol (2148.2699 without restraints) Performing minimization step: 747. Total energy = 2147.8620 kcal/mol (2147.8074 without restraints) Performing minimization step: 748. Total energy = 2147.4010 kcal/mol (2147.3468 without restraints) Performing minimization step: 749. Total energy = 2146.9416 kcal/mol (2146.8875 without restraints) Performing minimization step: 750. Total energy = 2146.4837 kcal/mol (2146.4298 without restraints) Performing minimization step: 751. Total energy = 2146.0274 kcal/mol (2145.9736 without restraints) Performing minimization step: 752. Total energy = 2145.5721 kcal/mol (2145.5185 without restraints) Performing minimization step: 753. Total energy = 2145.1185 kcal/mol (2145.0651 without restraints) Performing minimization step: 754. Total energy = 2144.6665 kcal/mol (2144.6132 without restraints) Performing minimization step: 755. Total energy = 2144.2159 kcal/mol (2144.1628 without restraints) Performing minimization step: 756. Total energy = 2143.7665 kcal/mol (2143.7136 without restraints) Performing minimization step: 757. Total energy = 2143.3188 kcal/mol (2143.2661 without restraints) Performing minimization step: 758. Total energy = 2142.8726 kcal/mol (2142.8200 without restraints) Performing minimization step: 759. Total energy = 2142.4280 kcal/mol (2142.3757 without restraints) Performing minimization step: 760. Total energy = 2141.9848 kcal/mol (2141.9325 without restraints) Performing minimization step: 761. Total energy = 2141.5429 kcal/mol (2141.4908 without restraints) Performing minimization step: 762. Total energy = 2141.1024 kcal/mol (2141.0504 without restraints) Performing minimization step: 763. Total energy = 2140.6628 kcal/mol (2140.6110 without restraints) Performing minimization step: 764. Total energy = 2140.2251 kcal/mol (2140.1735 without restraints) Performing minimization step: 765. Total energy = 2139.7888 kcal/mol (2139.7374 without restraints) Performing minimization step: 766. Total energy = 2139.3538 kcal/mol (2139.3025 without restraints) Performing minimization step: 767. Total energy = 2138.9203 kcal/mol (2138.8692 without restraints) Performing minimization step: 768. Total energy = 2138.4879 kcal/mol (2138.4369 without restraints) Performing minimization step: 769. Total energy = 2138.0568 kcal/mol (2138.0060 without restraints) Performing minimization step: 770. Total energy = 2137.6272 kcal/mol (2137.5766 without restraints) Performing minimization step: 771. Total energy = 2137.1992 kcal/mol (2137.1488 without restraints) Performing minimization step: 772. Total energy = 2136.7723 kcal/mol (2136.7220 without restraints) Performing minimization step: 773. Total energy = 2136.3468 kcal/mol (2136.2967 without restraints) Performing minimization step: 774. Total energy = 2135.9227 kcal/mol (2135.8726 without restraints) Performing minimization step: 775. Total energy = 2135.4999 kcal/mol (2135.4501 without restraints) Performing minimization step: 776. Total energy = 2135.0789 kcal/mol (2135.0294 without restraints) Performing minimization step: 777. Total energy = 2134.6591 kcal/mol (2134.6097 without restraints) Performing minimization step: 778. Total energy = 2134.2404 kcal/mol (2134.1911 without restraints) Performing minimization step: 779. Total energy = 2133.8230 kcal/mol (2133.7739 without restraints) Performing minimization step: 780. Total energy = 2133.4070 kcal/mol (2133.3579 without restraints) Performing minimization step: 781. Total energy = 2132.9918 kcal/mol (2132.9431 without restraints) Performing minimization step: 782. Total energy = 2132.5783 kcal/mol (2132.5295 without restraints) Performing minimization step: 783. Total energy = 2132.1660 kcal/mol (2132.1174 without restraints) Performing minimization step: 784. Total energy = 2131.7550 kcal/mol (2131.7066 without restraints) Performing minimization step: 785. Total energy = 2131.3455 kcal/mol (2131.2972 without restraints) Performing minimization step: 786. Total energy = 2130.9370 kcal/mol (2130.8889 without restraints) Performing minimization step: 787. Total energy = 2130.5298 kcal/mol (2130.4818 without restraints) Performing minimization step: 788. Total energy = 2130.1239 kcal/mol (2130.0760 without restraints) Performing minimization step: 789. Total energy = 2129.7192 kcal/mol (2129.6715 without restraints) Performing minimization step: 790. Total energy = 2129.3158 kcal/mol (2129.2682 without restraints) Performing minimization step: 791. Total energy = 2128.9138 kcal/mol (2128.8664 without restraints) Performing minimization step: 792. Total energy = 2128.5128 kcal/mol (2128.4655 without restraints) Performing minimization step: 793. Total energy = 2128.1128 kcal/mol (2128.0657 without restraints) Performing minimization step: 794. Total energy = 2127.7137 kcal/mol (2127.6669 without restraints) Performing minimization step: 795. Total energy = 2127.3165 kcal/mol (2127.2697 without restraints) Performing minimization step: 796. Total energy = 2126.9202 kcal/mol (2126.8734 without restraints) Performing minimization step: 797. Total energy = 2126.5253 kcal/mol (2126.4789 without restraints) Performing minimization step: 798. Total energy = 2126.1317 kcal/mol (2126.0854 without restraints) Performing minimization step: 799. Total energy = 2125.7395 kcal/mol (2125.6932 without restraints) Performing minimization step: 800. Total energy = 2125.3480 kcal/mol (2125.3020 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e90c65df/tmp/ENST00000666628_refx/ENST00000666628_refx.pdb ...Done. Performing minimization step: 801. Total energy = 2124.9578 kcal/mol (2124.9118 without restraints) Performing minimization step: 802. Total energy = 2124.5687 kcal/mol (2124.5228 without restraints) Performing minimization step: 803. Total energy = 2124.1807 kcal/mol (2124.1350 without restraints) Performing minimization step: 804. Total energy = 2123.7939 kcal/mol (2123.7483 without restraints) Performing minimization step: 805. Total energy = 2123.4086 kcal/mol (2123.3632 without restraints) Performing minimization step: 806. Total energy = 2123.0241 kcal/mol (2122.9787 without restraints) Performing minimization step: 807. Total energy = 2122.6409 kcal/mol (2122.5957 without restraints) Performing minimization step: 808. Total energy = 2122.2586 kcal/mol (2122.2136 without restraints) Performing minimization step: 809. Total energy = 2121.8774 kcal/mol (2121.8325 without restraints) Performing minimization step: 810. Total energy = 2121.4971 kcal/mol (2121.4523 without restraints) Performing minimization step: 811. Total energy = 2121.1182 kcal/mol (2121.0735 without restraints) Performing minimization step: 812. Total energy = 2120.7403 kcal/mol (2120.6958 without restraints) Performing minimization step: 813. Total energy = 2120.3636 kcal/mol (2120.3192 without restraints) Performing minimization step: 814. Total energy = 2119.9878 kcal/mol (2119.9435 without restraints) Performing minimization step: 815. Total energy = 2119.6132 kcal/mol (2119.5691 without restraints) Performing minimization step: 816. Total energy = 2119.2396 kcal/mol (2119.1955 without restraints) Performing minimization step: 817. Total energy = 2118.8675 kcal/mol (2118.8236 without restraints) Performing minimization step: 818. Total energy = 2118.4964 kcal/mol (2118.4527 without restraints) Performing minimization step: 819. Total energy = 2118.1263 kcal/mol (2118.0827 without restraints) Performing minimization step: 820. Total energy = 2117.7575 kcal/mol (2117.7143 without restraints) Performing minimization step: 821. Total energy = 2117.3896 kcal/mol (2117.3462 without restraints) Performing minimization step: 822. Total energy = 2117.0225 kcal/mol (2116.9793 without restraints) Performing minimization step: 823. Total energy = 2116.6565 kcal/mol (2116.6134 without restraints) Performing minimization step: 824. Total energy = 2116.2911 kcal/mol (2116.2481 without restraints) Performing minimization step: 825. Total energy = 2115.9272 kcal/mol (2115.8843 without restraints) Performing minimization step: 826. Total energy = 2115.5643 kcal/mol (2115.5215 without restraints) Performing minimization step: 827. Total energy = 2115.2024 kcal/mol (2115.1597 without restraints) Performing minimization step: 828. Total energy = 2114.8416 kcal/mol (2114.7991 without restraints) Performing minimization step: 829. Total energy = 2114.4818 kcal/mol (2114.4394 without restraints) Performing minimization step: 830. Total energy = 2114.1231 kcal/mol (2114.0809 without restraints) Performing minimization step: 831. Total energy = 2113.7655 kcal/mol (2113.7233 without restraints) Performing minimization step: 832. Total energy = 2113.4085 kcal/mol (2113.3665 without restraints) Performing minimization step: 833. Total energy = 2113.0525 kcal/mol (2113.0105 without restraints) Performing minimization step: 834. Total energy = 2112.6976 kcal/mol (2112.6557 without restraints) Performing minimization step: 835. Total energy = 2112.3437 kcal/mol (2112.3020 without restraints) Performing minimization step: 836. Total energy = 2111.9909 kcal/mol (2111.9493 without restraints) Performing minimization step: 837. Total energy = 2111.6389 kcal/mol (2111.5974 without restraints) Performing minimization step: 838. Total energy = 2111.2879 kcal/mol (2111.2466 without restraints) Performing minimization step: 839. Total energy = 2110.9379 kcal/mol (2110.8967 without restraints) Performing minimization step: 840. Total energy = 2110.5889 kcal/mol (2110.5477 without restraints) Performing minimization step: 841. Total energy = 2110.2408 kcal/mol (2110.1998 without restraints) Performing minimization step: 842. Total energy = 2109.8937 kcal/mol (2109.8528 without restraints) Performing minimization step: 843. Total energy = 2109.5474 kcal/mol (2109.5065 without restraints) Performing minimization step: 844. Total energy = 2109.2021 kcal/mol (2109.1614 without restraints) Performing minimization step: 845. Total energy = 2108.8577 kcal/mol (2108.8170 without restraints) Performing minimization step: 846. Total energy = 2108.5142 kcal/mol (2108.4737 without restraints) Performing minimization step: 847. Total energy = 2108.1718 kcal/mol (2108.1315 without restraints) Performing minimization step: 848. Total energy = 2107.8304 kcal/mol (2107.7901 without restraints) Performing minimization step: 849. Total energy = 2107.4897 kcal/mol (2107.4496 without restraints) Performing minimization step: 850. Total energy = 2107.1499 kcal/mol (2107.1096 without restraints) Performing minimization step: 851. Total energy = 2106.8111 kcal/mol (2106.7712 without restraints) Performing minimization step: 852. Total energy = 2106.4734 kcal/mol (2106.4337 without restraints) Performing minimization step: 853. Total energy = 2106.1366 kcal/mol (2106.0969 without restraints) Performing minimization step: 854. Total energy = 2105.8004 kcal/mol (2105.7608 without restraints) Performing minimization step: 855. Total energy = 2105.4650 kcal/mol (2105.4255 without restraints) Performing minimization step: 856. Total energy = 2105.1306 kcal/mol (2105.0912 without restraints) Performing minimization step: 857. Total energy = 2104.7973 kcal/mol (2104.7580 without restraints) Performing minimization step: 858. Total energy = 2104.4648 kcal/mol (2104.4256 without restraints) Performing minimization step: 859. Total energy = 2104.1332 kcal/mol (2104.0941 without restraints) Performing minimization step: 860. Total energy = 2103.8025 kcal/mol (2103.7635 without restraints) Performing minimization step: 861. Total energy = 2103.4726 kcal/mol (2103.4337 without restraints) Performing minimization step: 862. Total energy = 2103.1436 kcal/mol (2103.1049 without restraints) Performing minimization step: 863. Total energy = 2102.8154 kcal/mol (2102.7767 without restraints) Performing minimization step: 864. Total energy = 2102.4881 kcal/mol (2102.4495 without restraints) Performing minimization step: 865. Total energy = 2102.1615 kcal/mol (2102.1231 without restraints) Performing minimization step: 866. Total energy = 2101.8359 kcal/mol (2101.7976 without restraints) Performing minimization step: 867. Total energy = 2101.5113 kcal/mol (2101.4730 without restraints) Performing minimization step: 868. Total energy = 2101.1872 kcal/mol (2101.1490 without restraints) Performing minimization step: 869. Total energy = 2100.8644 kcal/mol (2100.8263 without restraints) Performing minimization step: 870. Total energy = 2100.5423 kcal/mol (2100.5043 without restraints) Performing minimization step: 871. Total energy = 2100.2209 kcal/mol (2100.1831 without restraints) Performing minimization step: 872. Total energy = 2099.9004 kcal/mol (2099.8626 without restraints) Performing minimization step: 873. Total energy = 2099.5807 kcal/mol (2099.5431 without restraints) Performing minimization step: 874. Total energy = 2099.2616 kcal/mol (2099.2241 without restraints) Performing minimization step: 875. Total energy = 2098.9437 kcal/mol (2098.9063 without restraints) Performing minimization step: 876. Total energy = 2098.6265 kcal/mol (2098.5891 without restraints) Performing minimization step: 877. Total energy = 2098.3099 kcal/mol (2098.2726 without restraints) Performing minimization step: 878. Total energy = 2097.9939 kcal/mol (2097.9567 without restraints) Performing minimization step: 879. Total energy = 2097.6791 kcal/mol (2097.6420 without restraints) Performing minimization step: 880. Total energy = 2097.3651 kcal/mol (2097.3280 without restraints) Performing minimization step: 881. Total energy = 2097.0516 kcal/mol (2097.0147 without restraints) Performing minimization step: 882. Total energy = 2096.7391 kcal/mol (2096.7023 without restraints) Performing minimization step: 883. Total energy = 2096.4275 kcal/mol (2096.3907 without restraints) Performing minimization step: 884. Total energy = 2096.1165 kcal/mol (2096.0798 without restraints) Performing minimization step: 885. Total energy = 2095.8062 kcal/mol (2095.7696 without restraints) Performing minimization step: 886. Total energy = 2095.4969 kcal/mol (2095.4604 without restraints) Performing minimization step: 887. Total energy = 2095.1883 kcal/mol (2095.1518 without restraints) Performing minimization step: 888. Total energy = 2094.8806 kcal/mol (2094.8444 without restraints) Performing minimization step: 889. Total energy = 2094.5736 kcal/mol (2094.5374 without restraints) Performing minimization step: 890. Total energy = 2094.2671 kcal/mol (2094.2310 without restraints) Performing minimization step: 891. Total energy = 2093.9616 kcal/mol (2093.9256 without restraints) Performing minimization step: 892. Total energy = 2093.6572 kcal/mol (2093.6214 without restraints) Performing minimization step: 893. Total energy = 2093.3534 kcal/mol (2093.3176 without restraints) Performing minimization step: 894. Total energy = 2093.0504 kcal/mol (2093.0146 without restraints) Performing minimization step: 895. Total energy = 2092.7476 kcal/mol (2092.7120 without restraints) Performing minimization step: 896. Total energy = 2092.4459 kcal/mol (2092.4104 without restraints) Performing minimization step: 897. Total energy = 2092.1449 kcal/mol (2092.1095 without restraints) Performing minimization step: 898. Total energy = 2091.8446 kcal/mol (2091.8091 without restraints) Performing minimization step: 899. Total energy = 2091.5446 kcal/mol (2091.5093 without restraints) Performing minimization step: 900. Total energy = 2091.2459 kcal/mol (2091.2106 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e90c65df/tmp/ENST00000666628_refx/ENST00000666628_refx.pdb ...Done. Performing minimization step: 901. Total energy = 2090.9478 kcal/mol (2090.9127 without restraints) Performing minimization step: 902. Total energy = 2090.6507 kcal/mol (2090.6158 without restraints) Performing minimization step: 903. Total energy = 2090.3543 kcal/mol (2090.3193 without restraints) Performing minimization step: 904. Total energy = 2090.0585 kcal/mol (2090.0237 without restraints) Performing minimization step: 905. Total energy = 2089.7632 kcal/mol (2089.7284 without restraints) Performing minimization step: 906. Total energy = 2089.4688 kcal/mol (2089.4340 without restraints) Performing minimization step: 907. Total energy = 2089.1750 kcal/mol (2089.1403 without restraints) Performing minimization step: 908. Total energy = 2088.8821 kcal/mol (2088.8475 without restraints) Performing minimization step: 909. Total energy = 2088.5893 kcal/mol (2088.5548 without restraints) Performing minimization step: 910. Total energy = 2088.2977 kcal/mol (2088.2633 without restraints) Performing minimization step: 911. Total energy = 2088.0067 kcal/mol (2087.9724 without restraints) Performing minimization step: 912. Total energy = 2087.7164 kcal/mol (2087.6822 without restraints) Performing minimization step: 913. Total energy = 2087.4268 kcal/mol (2087.3927 without restraints) Performing minimization step: 914. Total energy = 2087.1380 kcal/mol (2087.1041 without restraints) Performing minimization step: 915. Total energy = 2086.8499 kcal/mol (2086.8159 without restraints) Performing minimization step: 916. Total energy = 2086.5622 kcal/mol (2086.5283 without restraints) Performing minimization step: 917. Total energy = 2086.2753 kcal/mol (2086.2415 without restraints) Performing minimization step: 918. Total energy = 2085.9894 kcal/mol (2085.9557 without restraints) Performing minimization step: 919. Total energy = 2085.7038 kcal/mol (2085.6701 without restraints) Performing minimization step: 920. Total energy = 2085.4190 kcal/mol (2085.3854 without restraints) Performing minimization step: 921. Total energy = 2085.1350 kcal/mol (2085.1015 without restraints) Performing minimization step: 922. Total energy = 2084.8513 kcal/mol (2084.8179 without restraints) Performing minimization step: 923. Total energy = 2084.5685 kcal/mol (2084.5351 without restraints) Performing minimization step: 924. Total energy = 2084.2861 kcal/mol (2084.2528 without restraints) Performing minimization step: 925. Total energy = 2084.0046 kcal/mol (2083.9714 without restraints) Performing minimization step: 926. Total energy = 2083.7237 kcal/mol (2083.6906 without restraints) Performing minimization step: 927. Total energy = 2083.4436 kcal/mol (2083.4105 without restraints) Performing minimization step: 928. Total energy = 2083.1638 kcal/mol (2083.1309 without restraints) Performing minimization step: 929. Total energy = 2082.8849 kcal/mol (2082.8521 without restraints) Performing minimization step: 930. Total energy = 2082.6068 kcal/mol (2082.5740 without restraints) Performing minimization step: 931. Total energy = 2082.3296 kcal/mol (2082.2969 without restraints) Performing minimization step: 932. Total energy = 2082.0530 kcal/mol (2082.0204 without restraints) Performing minimization step: 933. Total energy = 2081.7767 kcal/mol (2081.7441 without restraints) Performing minimization step: 934. Total energy = 2081.5010 kcal/mol (2081.4685 without restraints) Performing minimization step: 935. Total energy = 2081.2260 kcal/mol (2081.1937 without restraints) Performing minimization step: 936. Total energy = 2080.9516 kcal/mol (2080.9193 without restraints) Performing minimization step: 937. Total energy = 2080.6777 kcal/mol (2080.6454 without restraints) Performing minimization step: 938. Total energy = 2080.4045 kcal/mol (2080.3723 without restraints) Performing minimization step: 939. Total energy = 2080.1319 kcal/mol (2080.0998 without restraints) Performing minimization step: 940. Total energy = 2079.8600 kcal/mol (2079.8279 without restraints) Performing minimization step: 941. Total energy = 2079.5886 kcal/mol (2079.5565 without restraints) Performing minimization step: 942. Total energy = 2079.3181 kcal/mol (2079.2863 without restraints) Performing minimization step: 943. Total energy = 2079.0481 kcal/mol (2079.0162 without restraints) Performing minimization step: 944. Total energy = 2078.7788 kcal/mol (2078.7470 without restraints) Performing minimization step: 945. Total energy = 2078.5103 kcal/mol (2078.4786 without restraints) Performing minimization step: 946. Total energy = 2078.2417 kcal/mol (2078.2101 without restraints) Performing minimization step: 947. Total energy = 2077.9739 kcal/mol (2077.9424 without restraints) Performing minimization step: 948. Total energy = 2077.7072 kcal/mol (2077.6757 without restraints) Performing minimization step: 949. Total energy = 2077.4405 kcal/mol (2077.4088 without restraints) Performing minimization step: 950. Total energy = 2077.1743 kcal/mol (2077.1429 without restraints) Performing minimization step: 951. Total energy = 2076.9087 kcal/mol (2076.8774 without restraints) Performing minimization step: 952. Total energy = 2076.6439 kcal/mol (2076.6127 without restraints) Performing minimization step: 953. Total energy = 2076.3797 kcal/mol (2076.3485 without restraints) Performing minimization step: 954. Total energy = 2076.1159 kcal/mol (2076.0848 without restraints) Performing minimization step: 955. Total energy = 2075.8529 kcal/mol (2075.8219 without restraints) Performing minimization step: 956. Total energy = 2075.5904 kcal/mol (2075.5594 without restraints) Performing minimization step: 957. Total energy = 2075.3285 kcal/mol (2075.2978 without restraints) Performing minimization step: 958. Total energy = 2075.0669 kcal/mol (2075.0361 without restraints) Performing minimization step: 959. Total energy = 2074.8062 kcal/mol (2074.7754 without restraints) Performing minimization step: 960. Total energy = 2074.5460 kcal/mol (2074.5153 without restraints) Performing minimization step: 961. Total energy = 2074.2860 kcal/mol (2074.2554 without restraints) Performing minimization step: 962. Total energy = 2074.0270 kcal/mol (2073.9964 without restraints) Performing minimization step: 963. Total energy = 2073.7685 kcal/mol (2073.7380 without restraints) Performing minimization step: 964. Total energy = 2073.5104 kcal/mol (2073.4800 without restraints) Performing minimization step: 965. Total energy = 2073.2530 kcal/mol (2073.2227 without restraints) Performing minimization step: 966. Total energy = 2072.9962 kcal/mol (2072.9659 without restraints) Performing minimization step: 967. Total energy = 2072.7399 kcal/mol (2072.7097 without restraints) Performing minimization step: 968. Total energy = 2072.4844 kcal/mol (2072.4544 without restraints) Performing minimization step: 969. Total energy = 2072.2293 kcal/mol (2072.1993 without restraints) Performing minimization step: 970. Total energy = 2071.9747 kcal/mol (2071.9447 without restraints) Performing minimization step: 971. Total energy = 2071.7206 kcal/mol (2071.6907 without restraints) Performing minimization step: 972. Total energy = 2071.4673 kcal/mol (2071.4374 without restraints) Performing minimization step: 973. Total energy = 2071.2143 kcal/mol (2071.1845 without restraints) Performing minimization step: 974. Total energy = 2070.9618 kcal/mol (2070.9321 without restraints) Performing minimization step: 975. Total energy = 2070.7098 kcal/mol (2070.6800 without restraints) Performing minimization step: 976. Total energy = 2070.4577 kcal/mol (2070.4281 without restraints) Performing minimization step: 977. Total energy = 2070.2070 kcal/mol (2070.1775 without restraints) Performing minimization step: 978. Total energy = 2069.9567 kcal/mol (2069.9272 without restraints) Performing minimization step: 979. Total energy = 2069.7069 kcal/mol (2069.6774 without restraints) Performing minimization step: 980. Total energy = 2069.4576 kcal/mol (2069.4282 without restraints) Performing minimization step: 981. Total energy = 2069.2084 kcal/mol (2069.1791 without restraints) Performing minimization step: 982. Total energy = 2068.9601 kcal/mol (2068.9309 without restraints) Performing minimization step: 983. Total energy = 2068.7121 kcal/mol (2068.6828 without restraints) Performing minimization step: 984. Total energy = 2068.4648 kcal/mol (2068.4356 without restraints) Performing minimization step: 985. Total energy = 2068.2182 kcal/mol (2068.1891 without restraints) Performing minimization step: 986. Total energy = 2067.9720 kcal/mol (2067.9430 without restraints) Performing minimization step: 987. Total energy = 2067.7260 kcal/mol (2067.6970 without restraints) Performing minimization step: 988. Total energy = 2067.4809 kcal/mol (2067.4521 without restraints) Performing minimization step: 989. Total energy = 2067.2366 kcal/mol (2067.2077 without restraints) Performing minimization step: 990. Total energy = 2066.9928 kcal/mol (2066.9640 without restraints) Performing minimization step: 991. Total energy = 2066.7491 kcal/mol (2066.7204 without restraints) Performing minimization step: 992. Total energy = 2066.5059 kcal/mol (2066.4773 without restraints) Performing minimization step: 993. Total energy = 2066.2631 kcal/mol (2066.2345 without restraints) Performing minimization step: 994. Total energy = 2066.0209 kcal/mol (2065.9922 without restraints) Performing minimization step: 995. Total energy = 2065.7791 kcal/mol (2065.7506 without restraints) Performing minimization step: 996. Total energy = 2065.5379 kcal/mol (2065.5095 without restraints) Performing minimization step: 997. Total energy = 2065.2972 kcal/mol (2065.2688 without restraints) Performing minimization step: 998. Total energy = 2065.0570 kcal/mol (2065.0287 without restraints) Performing minimization step: 999. Total energy = 2064.8173 kcal/mol (2064.7890 without restraints) Performing minimization step: 1000. Total energy = 2064.5782 kcal/mol (2064.5500 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e90c65df/tmp/ENST00000666628_refx/ENST00000666628_refx.pdb ...Done. Performing minimization step: 1001. Total energy = 2064.3394 kcal/mol (2064.3113 without restraints) Performing minimization step: 1002. Total energy = 2064.1011 kcal/mol (2064.0731 without restraints) Performing minimization step: 1003. Total energy = 2063.8634 kcal/mol (2063.8353 without restraints) Performing minimization step: 1004. Total energy = 2063.6258 kcal/mol (2063.5978 without restraints) Performing minimization step: 1005. Total energy = 2063.3890 kcal/mol (2063.3611 without restraints) Performing minimization step: 1006. Total energy = 2063.1526 kcal/mol (2063.1247 without restraints) Performing minimization step: 1007. Total energy = 2062.9166 kcal/mol (2062.8888 without restraints) Performing minimization step: 1008. Total energy = 2062.6812 kcal/mol (2062.6535 without restraints) Performing minimization step: 1009. Total energy = 2062.4463 kcal/mol (2062.4186 without restraints) Performing minimization step: 1010. Total energy = 2062.2116 kcal/mol (2062.1840 without restraints) Performing minimization step: 1011. Total energy = 2061.9774 kcal/mol (2061.9498 without restraints) Performing minimization step: 1012. Total energy = 2061.7440 kcal/mol (2061.7165 without restraints) Performing minimization step: 1013. Total energy = 2061.5105 kcal/mol (2061.4829 without restraints) Performing minimization step: 1014. Total energy = 2061.2777 kcal/mol (2061.2503 without restraints) Performing minimization step: 1015. Total energy = 2061.0457 kcal/mol (2061.0183 without restraints) Performing minimization step: 1016. Total energy = 2060.8139 kcal/mol (2060.7866 without restraints) Performing minimization step: 1017. Total energy = 2060.5827 kcal/mol (2060.5554 without restraints) Performing minimization step: 1018. Total energy = 2060.3519 kcal/mol (2060.3248 without restraints) Performing minimization step: 1019. Total energy = 2060.1217 kcal/mol (2060.0945 without restraints) Performing minimization step: 1020. Total energy = 2059.8917 kcal/mol (2059.8646 without restraints) Performing minimization step: 1021. Total energy = 2059.6622 kcal/mol (2059.6350 without restraints) Performing minimization step: 1022. Total energy = 2059.4328 kcal/mol (2059.4058 without restraints) Performing minimization step: 1023. Total energy = 2059.2042 kcal/mol (2059.1772 without restraints) Performing minimization step: 1024. Total energy = 2058.9757 kcal/mol (2058.9488 without restraints) Performing minimization step: 1025. Total energy = 2058.7480 kcal/mol (2058.7211 without restraints) Performing minimization step: 1026. Total energy = 2058.5207 kcal/mol (2058.4939 without restraints) Performing minimization step: 1027. Total energy = 2058.2938 kcal/mol (2058.2671 without restraints) Performing minimization step: 1028. Total energy = 2058.0675 kcal/mol (2058.0407 without restraints) Performing minimization step: 1029. Total energy = 2057.8414 kcal/mol (2057.8148 without restraints) Performing minimization step: 1030. Total energy = 2057.6159 kcal/mol (2057.5893 without restraints) Performing minimization step: 1031. Total energy = 2057.3907 kcal/mol (2057.3641 without restraints) Performing minimization step: 1032. Total energy = 2057.1657 kcal/mol (2057.1392 without restraints) Performing minimization step: 1033. Total energy = 2056.9417 kcal/mol (2056.9152 without restraints) Performing minimization step: 1034. Total energy = 2056.7178 kcal/mol (2056.6914 without restraints) Performing minimization step: 1035. Total energy = 2056.4946 kcal/mol (2056.4683 without restraints) Performing minimization step: 1036. Total energy = 2056.2716 kcal/mol (2056.2453 without restraints) Performing minimization step: 1037. Total energy = 2056.0491 kcal/mol (2056.0229 without restraints) Performing minimization step: 1038. Total energy = 2055.8270 kcal/mol (2055.8010 without restraints) Performing minimization step: 1039. Total energy = 2055.6053 kcal/mol (2055.5790 without restraints) Performing minimization step: 1040. Total energy = 2055.3840 kcal/mol (2055.3580 without restraints) Performing minimization step: 1041. Total energy = 2055.1631 kcal/mol (2055.1371 without restraints) Performing minimization step: 1042. Total energy = 2054.9424 kcal/mol (2054.9164 without restraints) Performing minimization step: 1043. Total energy = 2054.7221 kcal/mol (2054.6961 without restraints) Performing minimization step: 1044. Total energy = 2054.5024 kcal/mol (2054.4765 without restraints) Performing minimization step: 1045. Total energy = 2054.2829 kcal/mol (2054.2571 without restraints) Performing minimization step: 1046. Total energy = 2054.0642 kcal/mol (2054.0384 without restraints) Performing minimization step: 1047. Total energy = 2053.8457 kcal/mol (2053.8199 without restraints) Performing minimization step: 1048. Total energy = 2053.6276 kcal/mol (2053.6019 without restraints) Performing minimization step: 1049. Total energy = 2053.4098 kcal/mol (2053.3842 without restraints) Performing minimization step: 1050. Total energy = 2053.1925 kcal/mol (2053.1668 without restraints) Performing minimization step: 1051. Total energy = 2052.9754 kcal/mol (2052.9498 without restraints) Performing minimization step: 1052. Total energy = 2052.7587 kcal/mol (2052.7331 without restraints) Performing minimization step: 1053. Total energy = 2052.5424 kcal/mol (2052.5168 without restraints) Performing minimization step: 1054. Total energy = 2052.3266 kcal/mol (2052.3012 without restraints) Performing minimization step: 1055. Total energy = 2052.1115 kcal/mol (2052.0861 without restraints) Performing minimization step: 1056. Total energy = 2051.8968 kcal/mol (2051.8714 without restraints) Performing minimization step: 1057. Total energy = 2051.6828 kcal/mol (2051.6576 without restraints) Performing minimization step: 1058. Total energy = 2051.4687 kcal/mol (2051.4435 without restraints) Performing minimization step: 1059. Total energy = 2051.2550 kcal/mol (2051.2298 without restraints) Performing minimization step: 1060. Total energy = 2051.0415 kcal/mol (2051.0164 without restraints) Performing minimization step: 1061. Total energy = 2050.8282 kcal/mol (2050.8030 without restraints) Performing minimization step: 1062. Total energy = 2050.6153 kcal/mol (2050.5901 without restraints) Performing minimization step: 1063. Total energy = 2050.4031 kcal/mol (2050.3781 without restraints) Performing minimization step: 1064. Total energy = 2050.1913 kcal/mol (2050.1663 without restraints) Performing minimization step: 1065. Total energy = 2049.9797 kcal/mol (2049.9548 without restraints) Performing minimization step: 1066. Total energy = 2049.7686 kcal/mol (2049.7437 without restraints) Performing minimization step: 1067. Total energy = 2049.5578 kcal/mol (2049.5330 without restraints) Performing minimization step: 1068. Total energy = 2049.3474 kcal/mol (2049.3226 without restraints) Performing minimization step: 1069. Total energy = 2049.1374 kcal/mol (2049.1127 without restraints) Performing minimization step: 1070. Total energy = 2048.9278 kcal/mol (2048.9031 without restraints) Performing minimization step: 1071. Total energy = 2048.7185 kcal/mol (2048.6938 without restraints) Performing minimization step: 1072. Total energy = 2048.5094 kcal/mol (2048.4847 without restraints) Performing minimization step: 1073. Total energy = 2048.3010 kcal/mol (2048.2764 without restraints) Performing minimization step: 1074. Total energy = 2048.0928 kcal/mol (2048.0683 without restraints) Performing minimization step: 1075. Total energy = 2047.8850 kcal/mol (2047.8605 without restraints) Performing minimization step: 1076. Total energy = 2047.6773 kcal/mol (2047.6529 without restraints) Performing minimization step: 1077. Total energy = 2047.4703 kcal/mol (2047.4458 without restraints) Performing minimization step: 1078. Total energy = 2047.2635 kcal/mol (2047.2391 without restraints) Performing minimization step: 1079. Total energy = 2047.0571 kcal/mol (2047.0328 without restraints) Performing minimization step: 1080. Total energy = 2046.8511 kcal/mol (2046.8268 without restraints) Performing minimization step: 1081. Total energy = 2046.6454 kcal/mol (2046.6212 without restraints) Performing minimization step: 1082. Total energy = 2046.4401 kcal/mol (2046.4159 without restraints) Performing minimization step: 1083. Total energy = 2046.2351 kcal/mol (2046.2109 without restraints) Performing minimization step: 1084. Total energy = 2046.0301 kcal/mol (2046.0059 without restraints) Performing minimization step: 1085. Total energy = 2045.8258 kcal/mol (2045.8017 without restraints) Performing minimization step: 1086. Total energy = 2045.6218 kcal/mol (2045.5978 without restraints) Performing minimization step: 1087. Total energy = 2045.4176 kcal/mol (2045.3934 without restraints) Performing minimization step: 1088. Total energy = 2045.2140 kcal/mol (2045.1901 without restraints) Performing minimization step: 1089. Total energy = 2045.0111 kcal/mol (2044.9872 without restraints) Performing minimization step: 1090. Total energy = 2044.8085 kcal/mol (2044.7847 without restraints) Performing minimization step: 1091. Total energy = 2044.6060 kcal/mol (2044.5821 without restraints) Performing minimization step: 1092. Total energy = 2044.4041 kcal/mol (2044.3801 without restraints) Performing minimization step: 1093. Total energy = 2044.2024 kcal/mol (2044.1786 without restraints) Performing minimization step: 1094. Total energy = 2044.0012 kcal/mol (2043.9775 without restraints) Performing minimization step: 1095. Total energy = 2043.8004 kcal/mol (2043.7767 without restraints) Performing minimization step: 1096. Total energy = 2043.6001 kcal/mol (2043.5764 without restraints) Performing minimization step: 1097. Total energy = 2043.3996 kcal/mol (2043.3760 without restraints) Performing minimization step: 1098. Total energy = 2043.1998 kcal/mol (2043.1763 without restraints) Performing minimization step: 1099. Total energy = 2043.0003 kcal/mol (2042.9768 without restraints) Performing minimization step: 1100. Total energy = 2042.8013 kcal/mol (2042.7778 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e90c65df/tmp/ENST00000666628_refx/ENST00000666628_refx.pdb ...Done. Performing minimization step: 1101. Total energy = 2042.6024 kcal/mol (2042.5790 without restraints) Performing minimization step: 1102. Total energy = 2042.4041 kcal/mol (2042.3807 without restraints) Performing minimization step: 1103. Total energy = 2042.2058 kcal/mol (2042.1824 without restraints) Performing minimization step: 1104. Total energy = 2042.0079 kcal/mol (2041.9846 without restraints) Performing minimization step: 1105. Total energy = 2041.8102 kcal/mol (2041.7869 without restraints) Performing minimization step: 1106. Total energy = 2041.6129 kcal/mol (2041.5896 without restraints) Performing minimization step: 1107. Total energy = 2041.4157 kcal/mol (2041.3925 without restraints) Performing minimization step: 1108. Total energy = 2041.2193 kcal/mol (2041.1961 without restraints) Performing minimization step: 1109. Total energy = 2041.0228 kcal/mol (2040.9996 without restraints) Performing minimization step: 1110. Total energy = 2040.8267 kcal/mol (2040.8036 without restraints) Performing minimization step: 1111. Total energy = 2040.6309 kcal/mol (2040.6078 without restraints) Performing minimization step: 1112. Total energy = 2040.4353 kcal/mol (2040.4122 without restraints) Performing minimization step: 1113. Total energy = 2040.2404 kcal/mol (2040.2174 without restraints) Performing minimization step: 1114. Total energy = 2040.0457 kcal/mol (2040.0227 without restraints) Performing minimization step: 1115. Total energy = 2039.8512 kcal/mol (2039.8283 without restraints) Performing minimization step: 1116. Total energy = 2039.6571 kcal/mol (2039.6342 without restraints) Performing minimization step: 1117. Total energy = 2039.4633 kcal/mol (2039.4404 without restraints) Performing minimization step: 1118. Total energy = 2039.2698 kcal/mol (2039.2470 without restraints) Performing minimization step: 1119. Total energy = 2039.0764 kcal/mol (2039.0536 without restraints) Performing minimization step: 1120. Total energy = 2038.8836 kcal/mol (2038.8609 without restraints) Performing minimization step: 1121. Total energy = 2038.6908 kcal/mol (2038.6681 without restraints) Performing minimization step: 1122. Total energy = 2038.4985 kcal/mol (2038.4758 without restraints) Performing minimization step: 1123. Total energy = 2038.3064 kcal/mol (2038.2838 without restraints) Performing minimization step: 1124. Total energy = 2038.1147 kcal/mol (2038.0921 without restraints) Performing minimization step: 1125. Total energy = 2037.9233 kcal/mol (2037.9008 without restraints) Performing minimization step: 1126. Total energy = 2037.7322 kcal/mol (2037.7097 without restraints) Performing minimization step: 1127. Total energy = 2037.5412 kcal/mol (2037.5187 without restraints) Performing minimization step: 1128. Total energy = 2037.3507 kcal/mol (2037.3282 without restraints) Performing minimization step: 1129. Total energy = 2037.1602 kcal/mol (2037.1378 without restraints) Performing minimization step: 1130. Total energy = 2036.9701 kcal/mol (2036.9477 without restraints) Performing minimization step: 1131. Total energy = 2036.7797 kcal/mol (2036.7573 without restraints) Performing minimization step: 1132. Total energy = 2036.5904 kcal/mol (2036.5681 without restraints) Performing minimization step: 1133. Total energy = 2036.4013 kcal/mol (2036.3790 without restraints) Performing minimization step: 1134. Total energy = 2036.2126 kcal/mol (2036.1903 without restraints) Performing minimization step: 1135. Total energy = 2036.0240 kcal/mol (2036.0017 without restraints) Performing minimization step: 1136. Total energy = 2035.8353 kcal/mol (2035.8131 without restraints) Performing minimization step: 1137. Total energy = 2035.6474 kcal/mol (2035.6252 without restraints) Performing minimization step: 1138. Total energy = 2035.4597 kcal/mol (2035.4376 without restraints) Performing minimization step: 1139. Total energy = 2035.2725 kcal/mol (2035.2504 without restraints) Performing minimization step: 1140. Total energy = 2035.0852 kcal/mol (2035.0632 without restraints) Performing minimization step: 1141. Total energy = 2034.8984 kcal/mol (2034.8764 without restraints) Performing minimization step: 1142. Total energy = 2034.7120 kcal/mol (2034.6899 without restraints) Performing minimization step: 1143. Total energy = 2034.5257 kcal/mol (2034.5038 without restraints) Performing minimization step: 1144. Total energy = 2034.3398 kcal/mol (2034.3178 without restraints) Performing minimization step: 1145. Total energy = 2034.1540 kcal/mol (2034.1321 without restraints) Performing minimization step: 1146. Total energy = 2033.9686 kcal/mol (2033.9467 without restraints) Performing minimization step: 1147. Total energy = 2033.7838 kcal/mol (2033.7620 without restraints) Performing minimization step: 1148. Total energy = 2033.5988 kcal/mol (2033.5770 without restraints) Performing minimization step: 1149. Total energy = 2033.4143 kcal/mol (2033.3926 without restraints) Performing minimization step: 1150. Total energy = 2033.2301 kcal/mol (2033.2083 without restraints) Performing minimization step: 1151. Total energy = 2033.0460 kcal/mol (2033.0243 without restraints) Performing minimization step: 1152. Total energy = 2032.8618 kcal/mol (2032.8401 without restraints) Performing minimization step: 1153. Total energy = 2032.6782 kcal/mol (2032.6566 without restraints) Performing minimization step: 1154. Total energy = 2032.4948 kcal/mol (2032.4731 without restraints) Performing minimization step: 1155. Total energy = 2032.3117 kcal/mol (2032.2901 without restraints) Performing minimization step: 1156. Total energy = 2032.1287 kcal/mol (2032.1072 without restraints) Performing minimization step: 1157. Total energy = 2031.9463 kcal/mol (2031.9247 without restraints) Performing minimization step: 1158. Total energy = 2031.7642 kcal/mol (2031.7426 without restraints) Performing minimization step: 1159. Total energy = 2031.5820 kcal/mol (2031.5605 without restraints) Performing minimization step: 1160. Total energy = 2031.4003 kcal/mol (2031.3790 without restraints) Performing minimization step: 1161. Total energy = 2031.2190 kcal/mol (2031.1976 without restraints) Performing minimization step: 1162. Total energy = 2031.0378 kcal/mol (2031.0165 without restraints) Performing minimization step: 1163. Total energy = 2030.8569 kcal/mol (2030.8356 without restraints) Performing minimization step: 1164. Total energy = 2030.6764 kcal/mol (2030.6551 without restraints) Performing minimization step: 1165. Total energy = 2030.4963 kcal/mol (2030.4750 without restraints) Performing minimization step: 1166. Total energy = 2030.3157 kcal/mol (2030.2944 without restraints) Performing minimization step: 1167. Total energy = 2030.1358 kcal/mol (2030.1146 without restraints) Performing minimization step: 1168. Total energy = 2029.9563 kcal/mol (2029.9352 without restraints) Performing minimization step: 1169. Total energy = 2029.7769 kcal/mol (2029.7557 without restraints) Performing minimization step: 1170. Total energy = 2029.5975 kcal/mol (2029.5764 without restraints) Performing minimization step: 1171. Total energy = 2029.4186 kcal/mol (2029.3975 without restraints) Performing minimization step: 1172. Total energy = 2029.2400 kcal/mol (2029.2189 without restraints) Performing minimization step: 1173. Total energy = 2029.0615 kcal/mol (2029.0405 without restraints) Performing minimization step: 1174. Total energy = 2028.8834 kcal/mol (2028.8624 without restraints) Performing minimization step: 1175. Total energy = 2028.7055 kcal/mol (2028.6845 without restraints) Performing minimization step: 1176. Total energy = 2028.5280 kcal/mol (2028.5071 without restraints) Performing minimization step: 1177. Total energy = 2028.3504 kcal/mol (2028.3295 without restraints) Performing minimization step: 1178. Total energy = 2028.1729 kcal/mol (2028.1520 without restraints) Performing minimization step: 1179. Total energy = 2027.9958 kcal/mol (2027.9750 without restraints) Performing minimization step: 1180. Total energy = 2027.8193 kcal/mol (2027.7985 without restraints) Performing minimization step: 1181. Total energy = 2027.6425 kcal/mol (2027.6217 without restraints) Performing minimization step: 1182. Total energy = 2027.4663 kcal/mol (2027.4455 without restraints) Performing minimization step: 1183. Total energy = 2027.2903 kcal/mol (2027.2696 without restraints) Performing minimization step: 1184. Total energy = 2027.1147 kcal/mol (2027.0940 without restraints) Performing minimization step: 1185. Total energy = 2026.9392 kcal/mol (2026.9185 without restraints) Performing minimization step: 1186. Total energy = 2026.7639 kcal/mol (2026.7432 without restraints) Performing minimization step: 1187. Total energy = 2026.5888 kcal/mol (2026.5682 without restraints) Performing minimization step: 1188. Total energy = 2026.4140 kcal/mol (2026.3934 without restraints) Performing minimization step: 1189. Total energy = 2026.2395 kcal/mol (2026.2189 without restraints) Performing minimization step: 1190. Total energy = 2026.0647 kcal/mol (2026.0440 without restraints) Performing minimization step: 1191. Total energy = 2025.8905 kcal/mol (2025.8699 without restraints) Performing minimization step: 1192. Total energy = 2025.7167 kcal/mol (2025.6962 without restraints) Performing minimization step: 1193. Total energy = 2025.5429 kcal/mol (2025.5224 without restraints) Performing minimization step: 1194. Total energy = 2025.3695 kcal/mol (2025.3490 without restraints) Performing minimization step: 1195. Total energy = 2025.1962 kcal/mol (2025.1758 without restraints) Performing minimization step: 1196. Total energy = 2025.0232 kcal/mol (2025.0028 without restraints) Performing minimization step: 1197. Total energy = 2024.8503 kcal/mol (2024.8299 without restraints) Performing minimization step: 1198. Total energy = 2024.6778 kcal/mol (2024.6574 without restraints) Performing minimization step: 1199. Total energy = 2024.5053 kcal/mol (2024.4849 without restraints) Performing minimization step: 1200. Total energy = 2024.3333 kcal/mol (2024.3130 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e90c65df/tmp/ENST00000666628_refx/ENST00000666628_refx.pdb ...Done. Performing minimization step: 1201. Total energy = 2024.1610 kcal/mol (2024.1407 without restraints) Performing minimization step: 1202. Total energy = 2023.9896 kcal/mol (2023.9695 without restraints) Performing minimization step: 1203. Total energy = 2023.8183 kcal/mol (2023.7980 without restraints) Performing minimization step: 1204. Total energy = 2023.6469 kcal/mol (2023.6267 without restraints) Performing minimization step: 1205. Total energy = 2023.4759 kcal/mol (2023.4557 without restraints) Performing minimization step: 1206. Total energy = 2023.3049 kcal/mol (2023.2848 without restraints) Performing minimization step: 1207. Total energy = 2023.1341 kcal/mol (2023.1140 without restraints) Performing minimization step: 1208. Total energy = 2022.9640 kcal/mol (2022.9439 without restraints) Performing minimization step: 1209. Total energy = 2022.7937 kcal/mol (2022.7736 without restraints) Performing minimization step: 1210. Total energy = 2022.6237 kcal/mol (2022.6037 without restraints) Performing minimization step: 1211. Total energy = 2022.4540 kcal/mol (2022.4340 without restraints) Performing minimization step: 1212. Total energy = 2022.2845 kcal/mol (2022.2645 without restraints) Performing minimization step: 1213. Total energy = 2022.1151 kcal/mol (2022.0952 without restraints) Performing minimization step: 1214. Total energy = 2021.9462 kcal/mol (2021.9263 without restraints) Performing minimization step: 1215. Total energy = 2021.7774 kcal/mol (2021.7575 without restraints) Performing minimization step: 1216. Total energy = 2021.6089 kcal/mol (2021.5890 without restraints) Performing minimization step: 1217. Total energy = 2021.4405 kcal/mol (2021.4206 without restraints) Performing minimization step: 1218. Total energy = 2021.2722 kcal/mol (2021.2524 without restraints) Performing minimization step: 1219. Total energy = 2021.1042 kcal/mol (2021.0843 without restraints) Performing minimization step: 1220. Total energy = 2020.9364 kcal/mol (2020.9166 without restraints) Performing minimization step: 1221. Total energy = 2020.7683 kcal/mol (2020.7485 without restraints) Performing minimization step: 1222. Total energy = 2020.6009 kcal/mol (2020.5811 without restraints) Performing minimization step: 1223. Total energy = 2020.4339 kcal/mol (2020.4142 without restraints) Performing minimization step: 1224. Total energy = 2020.2666 kcal/mol (2020.2469 without restraints) Performing minimization step: 1225. Total energy = 2020.0998 kcal/mol (2020.0801 without restraints) Performing minimization step: 1226. Total energy = 2019.9334 kcal/mol (2019.9136 without restraints) Performing minimization step: 1227. Total energy = 2019.7667 kcal/mol (2019.7470 without restraints) Performing minimization step: 1228. Total energy = 2019.6004 kcal/mol (2019.5807 without restraints) Performing minimization step: 1229. Total energy = 2019.4340 kcal/mol (2019.4144 without restraints) Performing minimization step: 1230. Total energy = 2019.2684 kcal/mol (2019.2488 without restraints) Performing minimization step: 1231. Total energy = 2019.1026 kcal/mol (2019.0830 without restraints) Performing minimization step: 1232. Total energy = 2018.9371 kcal/mol (2018.9176 without restraints) Performing minimization step: 1233. Total energy = 2018.7718 kcal/mol (2018.7523 without restraints) Performing minimization step: 1234. Total energy = 2018.6068 kcal/mol (2018.5873 without restraints) Performing minimization step: 1235. Total energy = 2018.4417 kcal/mol (2018.4223 without restraints) Performing minimization step: 1236. Total energy = 2018.2770 kcal/mol (2018.2576 without restraints) Performing minimization step: 1237. Total energy = 2018.1125 kcal/mol (2018.0930 without restraints) Performing minimization step: 1238. Total energy = 2017.9481 kcal/mol (2017.9287 without restraints) Performing minimization step: 1239. Total energy = 2017.7838 kcal/mol (2017.7645 without restraints) Performing minimization step: 1240. Total energy = 2017.6199 kcal/mol (2017.6006 without restraints) Performing minimization step: 1241. Total energy = 2017.4562 kcal/mol (2017.4369 without restraints) Performing minimization step: 1242. Total energy = 2017.2926 kcal/mol (2017.2733 without restraints) Performing minimization step: 1243. Total energy = 2017.1293 kcal/mol (2017.1100 without restraints) Performing minimization step: 1244. Total energy = 2016.9661 kcal/mol (2016.9468 without restraints) Performing minimization step: 1245. Total energy = 2016.8030 kcal/mol (2016.7837 without restraints) Performing minimization step: 1246. Total energy = 2016.6402 kcal/mol (2016.6210 without restraints) Performing minimization step: 1247. Total energy = 2016.4776 kcal/mol (2016.4584 without restraints) Performing minimization step: 1248. Total energy = 2016.3152 kcal/mol (2016.2960 without restraints) Performing minimization step: 1249. Total energy = 2016.1529 kcal/mol (2016.1338 without restraints) Performing minimization step: 1250. Total energy = 2015.9909 kcal/mol (2015.9718 without restraints) Performing minimization step: 1251. Total energy = 2015.8292 kcal/mol (2015.8102 without restraints) Performing minimization step: 1252. Total energy = 2015.6675 kcal/mol (2015.6483 without restraints) Performing minimization step: 1253. Total energy = 2015.5058 kcal/mol (2015.4868 without restraints) Performing minimization step: 1254. Total energy = 2015.3447 kcal/mol (2015.3256 without restraints) Performing minimization step: 1255. Total energy = 2015.1834 kcal/mol (2015.1643 without restraints) Performing minimization step: 1256. Total energy = 2015.0223 kcal/mol (2015.0033 without restraints) Performing minimization step: 1257. Total energy = 2014.8612 kcal/mol (2014.8423 without restraints) Performing minimization step: 1258. Total energy = 2014.7007 kcal/mol (2014.6818 without restraints) Performing minimization step: 1259. Total energy = 2014.5401 kcal/mol (2014.5212 without restraints) Performing minimization step: 1260. Total energy = 2014.3799 kcal/mol (2014.3610 without restraints) Performing minimization step: 1261. Total energy = 2014.2198 kcal/mol (2014.2010 without restraints) Performing minimization step: 1262. Total energy = 2014.0599 kcal/mol (2014.0411 without restraints) Performing minimization step: 1263. Total energy = 2013.9002 kcal/mol (2013.8814 without restraints) Performing minimization step: 1264. Total energy = 2013.7406 kcal/mol (2013.7218 without restraints) Performing minimization step: 1265. Total energy = 2013.5812 kcal/mol (2013.5624 without restraints) Performing minimization step: 1266. Total energy = 2013.4215 kcal/mol (2013.4028 without restraints) Performing minimization step: 1267. Total energy = 2013.2623 kcal/mol (2013.2436 without restraints) Performing minimization step: 1268. Total energy = 2013.1035 kcal/mol (2013.0847 without restraints) Performing minimization step: 1269. Total energy = 2012.9447 kcal/mol (2012.9260 without restraints) Performing minimization step: 1270. Total energy = 2012.7859 kcal/mol (2012.7672 without restraints) Performing minimization step: 1271. Total energy = 2012.6275 kcal/mol (2012.6088 without restraints) Performing minimization step: 1272. Total energy = 2012.4694 kcal/mol (2012.4507 without restraints) Performing minimization step: 1273. Total energy = 2012.3109 kcal/mol (2012.2923 without restraints) Performing minimization step: 1274. Total energy = 2012.1531 kcal/mol (2012.1346 without restraints) Performing minimization step: 1275. Total energy = 2011.9955 kcal/mol (2011.9769 without restraints) Performing minimization step: 1276. Total energy = 2011.8379 kcal/mol (2011.8193 without restraints) Performing minimization step: 1277. Total energy = 2011.6806 kcal/mol (2011.6620 without restraints) Performing minimization step: 1278. Total energy = 2011.5231 kcal/mol (2011.5044 without restraints) Performing minimization step: 1279. Total energy = 2011.3662 kcal/mol (2011.3476 without restraints) Performing minimization step: 1280. Total energy = 2011.2092 kcal/mol (2011.1906 without restraints) Performing minimization step: 1281. Total energy = 2011.0523 kcal/mol (2011.0339 without restraints) Performing minimization step: 1282. Total energy = 2010.8958 kcal/mol (2010.8773 without restraints) Performing minimization step: 1283. Total energy = 2010.7392 kcal/mol (2010.7207 without restraints) Performing minimization step: 1284. Total energy = 2010.5827 kcal/mol (2010.5643 without restraints) Performing minimization step: 1285. Total energy = 2010.4266 kcal/mol (2010.4082 without restraints) Performing minimization step: 1286. Total energy = 2010.2707 kcal/mol (2010.2523 without restraints) Performing minimization step: 1287. Total energy = 2010.1150 kcal/mol (2010.0966 without restraints) Performing minimization step: 1288. Total energy = 2009.9590 kcal/mol (2009.9406 without restraints) Performing minimization step: 1289. Total energy = 2009.8035 kcal/mol (2009.7852 without restraints) Performing minimization step: 1290. Total energy = 2009.6485 kcal/mol (2009.6302 without restraints) Performing minimization step: 1291. Total energy = 2009.4933 kcal/mol (2009.4750 without restraints) Performing minimization step: 1292. Total energy = 2009.3386 kcal/mol (2009.3203 without restraints) Performing minimization step: 1293. Total energy = 2009.1837 kcal/mol (2009.1655 without restraints) Performing minimization step: 1294. Total energy = 2009.0288 kcal/mol (2009.0106 without restraints) Performing minimization step: 1295. Total energy = 2008.8743 kcal/mol (2008.8561 without restraints) Performing minimization step: 1296. Total energy = 2008.7199 kcal/mol (2008.7017 without restraints) Performing minimization step: 1297. Total energy = 2008.5660 kcal/mol (2008.5478 without restraints) Performing minimization step: 1298. Total energy = 2008.4121 kcal/mol (2008.3939 without restraints) Performing minimization step: 1299. Total energy = 2008.2580 kcal/mol (2008.2398 without restraints) Performing minimization step: 1300. Total energy = 2008.1039 kcal/mol (2008.0857 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e90c65df/tmp/ENST00000666628_refx/ENST00000666628_refx.pdb ...Done. Performing minimization step: 1301. Total energy = 2007.9506 kcal/mol (2007.9325 without restraints) Performing minimization step: 1302. Total energy = 2007.7972 kcal/mol (2007.7791 without restraints) Performing minimization step: 1303. Total energy = 2007.6439 kcal/mol (2007.6258 without restraints) Performing minimization step: 1304. Total energy = 2007.4907 kcal/mol (2007.4726 without restraints) Performing minimization step: 1305. Total energy = 2007.3373 kcal/mol (2007.3193 without restraints) Performing minimization step: 1306. Total energy = 2007.1844 kcal/mol (2007.1664 without restraints) Performing minimization step: 1307. Total energy = 2007.0315 kcal/mol (2007.0135 without restraints) Performing minimization step: 1308. Total energy = 2006.8790 kcal/mol (2006.8610 without restraints) Performing minimization step: 1309. Total energy = 2006.7266 kcal/mol (2006.7086 without restraints) Performing minimization step: 1310. Total energy = 2006.5742 kcal/mol (2006.5562 without restraints) Performing minimization step: 1311. Total energy = 2006.4221 kcal/mol (2006.4041 without restraints) Performing minimization step: 1312. Total energy = 2006.2701 kcal/mol (2006.2521 without restraints) Performing minimization step: 1313. Total energy = 2006.1182 kcal/mol (2006.1003 without restraints) Performing minimization step: 1314. Total energy = 2005.9665 kcal/mol (2005.9487 without restraints) Performing minimization step: 1315. Total energy = 2005.8150 kcal/mol (2005.7971 without restraints) Performing minimization step: 1316. Total energy = 2005.6638 kcal/mol (2005.6461 without restraints) Performing minimization step: 1317. Total energy = 2005.5127 kcal/mol (2005.4949 without restraints) Performing minimization step: 1318. Total energy = 2005.3613 kcal/mol (2005.3433 without restraints) Performing minimization step: 1319. Total energy = 2005.2101 kcal/mol (2005.1923 without restraints) Performing minimization step: 1320. Total energy = 2005.0591 kcal/mol (2005.0413 without restraints) Performing minimization step: 1321. Total energy = 2004.9084 kcal/mol (2004.8906 without restraints) Performing minimization step: 1322. Total energy = 2004.7577 kcal/mol (2004.7398 without restraints) Performing minimization step: 1323. Total energy = 2004.6071 kcal/mol (2004.5894 without restraints) Performing minimization step: 1324. Total energy = 2004.4568 kcal/mol (2004.4391 without restraints) Performing minimization step: 1325. Total energy = 2004.3064 kcal/mol (2004.2887 without restraints) Performing minimization step: 1326. Total energy = 2004.1564 kcal/mol (2004.1387 without restraints) Performing minimization step: 1327. Total energy = 2004.0065 kcal/mol (2003.9888 without restraints) Performing minimization step: 1328. Total energy = 2003.8567 kcal/mol (2003.8391 without restraints) Performing minimization step: 1329. Total energy = 2003.7073 kcal/mol (2003.6897 without restraints) Performing minimization step: 1330. Total energy = 2003.5579 kcal/mol (2003.5402 without restraints) Performing minimization step: 1331. Total energy = 2003.4085 kcal/mol (2003.3908 without restraints) Performing minimization step: 1332. Total energy = 2003.2588 kcal/mol (2003.2412 without restraints) Performing minimization step: 1333. Total energy = 2003.1097 kcal/mol (2003.0921 without restraints) Performing minimization step: 1334. Total energy = 2002.9609 kcal/mol (2002.9434 without restraints) Performing minimization step: 1335. Total energy = 2002.8122 kcal/mol (2002.7946 without restraints) Performing minimization step: 1336. Total energy = 2002.6636 kcal/mol (2002.6461 without restraints) Performing minimization step: 1337. Total energy = 2002.5147 kcal/mol (2002.4972 without restraints) Performing minimization step: 1338. Total energy = 2002.3663 kcal/mol (2002.3488 without restraints) Performing minimization step: 1339. Total energy = 2002.2180 kcal/mol (2002.2005 without restraints) Performing minimization step: 1340. Total energy = 2002.0698 kcal/mol (2002.0523 without restraints) Performing minimization step: 1341. Total energy = 2001.9220 kcal/mol (2001.9045 without restraints) Performing minimization step: 1342. Total energy = 2001.7739 kcal/mol (2001.7564 without restraints) Performing minimization step: 1343. Total energy = 2001.6261 kcal/mol (2001.6087 without restraints) Performing minimization step: 1344. Total energy = 2001.4784 kcal/mol (2001.4609 without restraints) Performing minimization step: 1345. Total energy = 2001.3308 kcal/mol (2001.3134 without restraints) Performing minimization step: 1346. Total energy = 2001.1834 kcal/mol (2001.1660 without restraints) Performing minimization step: 1347. Total energy = 2001.0359 kcal/mol (2001.0185 without restraints) Performing minimization step: 1348. Total energy = 2000.8888 kcal/mol (2000.8714 without restraints) Performing minimization step: 1349. Total energy = 2000.7416 kcal/mol (2000.7240 without restraints) Performing minimization step: 1350. Total energy = 2000.5945 kcal/mol (2000.5772 without restraints) Performing minimization step: 1351. Total energy = 2000.4477 kcal/mol (2000.4304 without restraints) Performing minimization step: 1352. Total energy = 2000.3011 kcal/mol (2000.2838 without restraints) Performing minimization step: 1353. Total energy = 2000.1546 kcal/mol (2000.1373 without restraints) Performing minimization step: 1354. Total energy = 2000.0082 kcal/mol (1999.9909 without restraints) Performing minimization step: 1355. Total energy = 1999.8619 kcal/mol (1999.8446 without restraints) Performing minimization step: 1356. Total energy = 1999.7157 kcal/mol (1999.6985 without restraints) Performing minimization step: 1357. Total energy = 1999.5695 kcal/mol (1999.5523 without restraints) Performing minimization step: 1358. Total energy = 1999.4236 kcal/mol (1999.4064 without restraints) Performing minimization step: 1359. Total energy = 1999.2778 kcal/mol (1999.2606 without restraints) Performing minimization step: 1360. Total energy = 1999.1322 kcal/mol (1999.1150 without restraints) Performing minimization step: 1361. Total energy = 1998.9866 kcal/mol (1998.9695 without restraints) Performing minimization step: 1362. Total energy = 1998.8413 kcal/mol (1998.8240 without restraints) Performing minimization step: 1363. Total energy = 1998.6959 kcal/mol (1998.6787 without restraints) Performing minimization step: 1364. Total energy = 1998.5505 kcal/mol (1998.5334 without restraints) Performing minimization step: 1365. Total energy = 1998.4055 kcal/mol (1998.3884 without restraints) Performing minimization step: 1366. Total energy = 1998.2606 kcal/mol (1998.2435 without restraints) Performing minimization step: 1367. Total energy = 1998.1158 kcal/mol (1998.0988 without restraints) Performing minimization step: 1368. Total energy = 1997.9711 kcal/mol (1997.9541 without restraints) Performing minimization step: 1369. Total energy = 1997.8264 kcal/mol (1997.8092 without restraints) Performing minimization step: 1370. Total energy = 1997.6818 kcal/mol (1997.6648 without restraints) Performing minimization step: 1371. Total energy = 1997.5375 kcal/mol (1997.5204 without restraints) Performing minimization step: 1372. Total energy = 1997.3930 kcal/mol (1997.3760 without restraints) Performing minimization step: 1373. Total energy = 1997.2489 kcal/mol (1997.2319 without restraints) Performing minimization step: 1374. Total energy = 1997.1049 kcal/mol (1997.0879 without restraints) Performing minimization step: 1375. Total energy = 1996.9613 kcal/mol (1996.9443 without restraints) Performing minimization step: 1376. Total energy = 1996.8171 kcal/mol (1996.8001 without restraints) Performing minimization step: 1377. Total energy = 1996.6734 kcal/mol (1996.6565 without restraints) Performing minimization step: 1378. Total energy = 1996.5300 kcal/mol (1996.5131 without restraints) Performing minimization step: 1379. Total energy = 1996.3861 kcal/mol (1996.3692 without restraints) Performing minimization step: 1380. Total energy = 1996.2428 kcal/mol (1996.2259 without restraints) Performing minimization step: 1381. Total energy = 1996.0996 kcal/mol (1996.0827 without restraints) Performing minimization step: 1382. Total energy = 1995.9565 kcal/mol (1995.9397 without restraints) Performing minimization step: 1383. Total energy = 1995.8138 kcal/mol (1995.7969 without restraints) Performing minimization step: 1384. Total energy = 1995.6705 kcal/mol (1995.6536 without restraints) Performing minimization step: 1385. Total energy = 1995.5277 kcal/mol (1995.5109 without restraints) Performing minimization step: 1386. Total energy = 1995.3849 kcal/mol (1995.3681 without restraints) Performing minimization step: 1387. Total energy = 1995.2424 kcal/mol (1995.2256 without restraints) Performing minimization step: 1388. Total energy = 1995.0999 kcal/mol (1995.0831 without restraints) Performing minimization step: 1389. Total energy = 1994.9576 kcal/mol (1994.9408 without restraints) Performing minimization step: 1390. Total energy = 1994.8152 kcal/mol (1994.7984 without restraints) Performing minimization step: 1391. Total energy = 1994.6733 kcal/mol (1994.6565 without restraints) Performing minimization step: 1392. Total energy = 1994.5312 kcal/mol (1994.5144 without restraints) Performing minimization step: 1393. Total energy = 1994.3893 kcal/mol (1994.3725 without restraints) Performing minimization step: 1394. Total energy = 1994.2474 kcal/mol (1994.2307 without restraints) Performing minimization step: 1395. Total energy = 1994.1058 kcal/mol (1994.0891 without restraints) Performing minimization step: 1396. Total energy = 1993.9640 kcal/mol (1993.9473 without restraints) Performing minimization step: 1397. Total energy = 1993.8225 kcal/mol (1993.8058 without restraints) Performing minimization step: 1398. Total energy = 1993.6812 kcal/mol (1993.6645 without restraints) Performing minimization step: 1399. Total energy = 1993.5401 kcal/mol (1993.5234 without restraints) Performing minimization step: 1400. Total energy = 1993.3990 kcal/mol (1993.3823 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e90c65df/tmp/ENST00000666628_refx/ENST00000666628_refx.pdb ...Done. Performing minimization step: 1401. Total energy = 1993.2580 kcal/mol (1993.2413 without restraints) Performing minimization step: 1402. Total energy = 1993.1171 kcal/mol (1993.1004 without restraints) Performing minimization step: 1403. Total energy = 1992.9765 kcal/mol (1992.9598 without restraints) Performing minimization step: 1404. Total energy = 1992.8353 kcal/mol (1992.8187 without restraints) Performing minimization step: 1405. Total energy = 1992.6948 kcal/mol (1992.6782 without restraints) Performing minimization step: 1406. Total energy = 1992.5545 kcal/mol (1992.5379 without restraints) Performing minimization step: 1407. Total energy = 1992.4137 kcal/mol (1992.3971 without restraints) Performing minimization step: 1408. Total energy = 1992.2734 kcal/mol (1992.2568 without restraints) Performing minimization step: 1409. Total energy = 1992.1332 kcal/mol (1992.1166 without restraints) Performing minimization step: 1410. Total energy = 1991.9931 kcal/mol (1991.9766 without restraints) Performing minimization step: 1411. Total energy = 1991.8534 kcal/mol (1991.8369 without restraints) Performing minimization step: 1412. Total energy = 1991.7139 kcal/mol (1991.6974 without restraints) Performing minimization step: 1413. Total energy = 1991.5741 kcal/mol (1991.5576 without restraints) Performing minimization step: 1414. Total energy = 1991.4343 kcal/mol (1991.4177 without restraints) Performing minimization step: 1415. Total energy = 1991.2946 kcal/mol (1991.2781 without restraints) Performing minimization step: 1416. Total energy = 1991.1552 kcal/mol (1991.1387 without restraints) Performing minimization step: 1417. Total energy = 1991.0155 kcal/mol (1990.9990 without restraints) Performing minimization step: 1418. Total energy = 1990.8760 kcal/mol (1990.8596 without restraints) Performing minimization step: 1419. Total energy = 1990.7368 kcal/mol (1990.7204 without restraints) Performing minimization step: 1420. Total energy = 1990.5977 kcal/mol (1990.5811 without restraints) Performing minimization step: 1421. Total energy = 1990.4586 kcal/mol (1990.4422 without restraints) Performing minimization step: 1422. Total energy = 1990.3197 kcal/mol (1990.3033 without restraints) Performing minimization step: 1423. Total energy = 1990.1811 kcal/mol (1990.1648 without restraints) Performing minimization step: 1424. Total energy = 1990.0425 kcal/mol (1990.0261 without restraints) Performing minimization step: 1425. Total energy = 1989.9038 kcal/mol (1989.8875 without restraints) Performing minimization step: 1426. Total energy = 1989.7654 kcal/mol (1989.7490 without restraints) Performing minimization step: 1427. Total energy = 1989.6269 kcal/mol (1989.6105 without restraints) Performing minimization step: 1428. Total energy = 1989.4885 kcal/mol (1989.4722 without restraints) Performing minimization step: 1429. Total energy = 1989.3501 kcal/mol (1989.3338 without restraints) Performing minimization step: 1430. Total energy = 1989.2115 kcal/mol (1989.1952 without restraints) Performing minimization step: 1431. Total energy = 1989.0730 kcal/mol (1989.0567 without restraints) Performing minimization step: 1432. Total energy = 1988.9351 kcal/mol (1988.9188 without restraints) Performing minimization step: 1433. Total energy = 1988.7971 kcal/mol (1988.7809 without restraints) Performing minimization step: 1434. Total energy = 1988.6594 kcal/mol (1988.6431 without restraints) Performing minimization step: 1435. Total energy = 1988.5218 kcal/mol (1988.5056 without restraints) Performing minimization step: 1436. Total energy = 1988.3842 kcal/mol (1988.3680 without restraints) Performing minimization step: 1437. Total energy = 1988.2469 kcal/mol (1988.2307 without restraints) Performing minimization step: 1438. Total energy = 1988.1096 kcal/mol (1988.0934 without restraints) Performing minimization step: 1439. Total energy = 1987.9724 kcal/mol (1987.9562 without restraints) Performing minimization step: 1440. Total energy = 1987.8352 kcal/mol (1987.8190 without restraints) Performing minimization step: 1441. Total energy = 1987.6981 kcal/mol (1987.6820 without restraints) Performing minimization step: 1442. Total energy = 1987.5613 kcal/mol (1987.5452 without restraints) Performing minimization step: 1443. Total energy = 1987.4241 kcal/mol (1987.4080 without restraints) Performing minimization step: 1444. Total energy = 1987.2874 kcal/mol (1987.2712 without restraints) Performing minimization step: 1445. Total energy = 1987.1505 kcal/mol (1987.1343 without restraints) Performing minimization step: 1446. Total energy = 1987.0140 kcal/mol (1986.9980 without restraints) Performing minimization step: 1447. Total energy = 1986.8775 kcal/mol (1986.8613 without restraints) Performing minimization step: 1448. Total energy = 1986.7411 kcal/mol (1986.7251 without restraints) Performing minimization step: 1449. Total energy = 1986.6046 kcal/mol (1986.5885 without restraints) Performing minimization step: 1450. Total energy = 1986.4683 kcal/mol (1986.4522 without restraints) Performing minimization step: 1451. Total energy = 1986.3322 kcal/mol (1986.3161 without restraints) Performing minimization step: 1452. Total energy = 1986.1961 kcal/mol (1986.1801 without restraints) Performing minimization step: 1453. Total energy = 1986.0602 kcal/mol (1986.0442 without restraints) Performing minimization step: 1454. Total energy = 1985.9241 kcal/mol (1985.9081 without restraints) Performing minimization step: 1455. Total energy = 1985.7883 kcal/mol (1985.7723 without restraints) Performing minimization step: 1456. Total energy = 1985.6526 kcal/mol (1985.6366 without restraints) Performing minimization step: 1457. Total energy = 1985.5170 kcal/mol (1985.5010 without restraints) Performing minimization step: 1458. Total energy = 1985.3815 kcal/mol (1985.3655 without restraints) Performing minimization step: 1459. Total energy = 1985.2461 kcal/mol (1985.2301 without restraints) Performing minimization step: 1460. Total energy = 1985.1107 kcal/mol (1985.0948 without restraints) Performing minimization step: 1461. Total energy = 1984.9755 kcal/mol (1984.9595 without restraints) Performing minimization step: 1462. Total energy = 1984.8403 kcal/mol (1984.8244 without restraints) Performing minimization step: 1463. Total energy = 1984.7053 kcal/mol (1984.6894 without restraints) Performing minimization step: 1464. Total energy = 1984.5703 kcal/mol (1984.5544 without restraints) Performing minimization step: 1465. Total energy = 1984.4354 kcal/mol (1984.4195 without restraints) Performing minimization step: 1466. Total energy = 1984.3008 kcal/mol (1984.2849 without restraints) Performing minimization step: 1467. Total energy = 1984.1661 kcal/mol (1984.1502 without restraints) Performing minimization step: 1468. Total energy = 1984.0311 kcal/mol (1984.0152 without restraints) Performing minimization step: 1469. Total energy = 1983.8965 kcal/mol (1983.8807 without restraints) Performing minimization step: 1470. Total energy = 1983.7621 kcal/mol (1983.7462 without restraints) Performing minimization step: 1471. Total energy = 1983.6275 kcal/mol (1983.6116 without restraints) Performing minimization step: 1472. Total energy = 1983.4932 kcal/mol (1983.4774 without restraints) Performing minimization step: 1473. Total energy = 1983.3588 kcal/mol (1983.3430 without restraints) Performing minimization step: 1474. Total energy = 1983.2246 kcal/mol (1983.2088 without restraints) Performing minimization step: 1475. Total energy = 1983.0906 kcal/mol (1983.0747 without restraints) Performing minimization step: 1476. Total energy = 1982.9565 kcal/mol (1982.9406 without restraints) Performing minimization step: 1477. Total energy = 1982.8224 kcal/mol (1982.8066 without restraints) Performing minimization step: 1478. Total energy = 1982.6885 kcal/mol (1982.6727 without restraints) Performing minimization step: 1479. Total energy = 1982.5548 kcal/mol (1982.5390 without restraints) Performing minimization step: 1480. Total energy = 1982.4212 kcal/mol (1982.4054 without restraints) Performing minimization step: 1481. Total energy = 1982.2874 kcal/mol (1982.2716 without restraints) Performing minimization step: 1482. Total energy = 1982.1540 kcal/mol (1982.1382 without restraints) Performing minimization step: 1483. Total energy = 1982.0206 kcal/mol (1982.0049 without restraints) Performing minimization step: 1484. Total energy = 1981.8873 kcal/mol (1981.8716 without restraints) Performing minimization step: 1485. Total energy = 1981.7539 kcal/mol (1981.7382 without restraints) Performing minimization step: 1486. Total energy = 1981.6207 kcal/mol (1981.6050 without restraints) Performing minimization step: 1487. Total energy = 1981.4877 kcal/mol (1981.4720 without restraints) Performing minimization step: 1488. Total energy = 1981.3549 kcal/mol (1981.3392 without restraints) Performing minimization step: 1489. Total energy = 1981.2221 kcal/mol (1981.2064 without restraints) Performing minimization step: 1490. Total energy = 1981.0891 kcal/mol (1981.0734 without restraints) Performing minimization step: 1491. Total energy = 1980.9563 kcal/mol (1980.9406 without restraints) Performing minimization step: 1492. Total energy = 1980.8236 kcal/mol (1980.8079 without restraints) Performing minimization step: 1493. Total energy = 1980.6910 kcal/mol (1980.6753 without restraints) Performing minimization step: 1494. Total energy = 1980.5583 kcal/mol (1980.5426 without restraints) Performing minimization step: 1495. Total energy = 1980.4258 kcal/mol (1980.4102 without restraints) Performing minimization step: 1496. Total energy = 1980.2930 kcal/mol (1980.2771 without restraints) Performing minimization step: 1497. Total energy = 1980.1604 kcal/mol (1980.1448 without restraints) Performing minimization step: 1498. Total energy = 1980.0281 kcal/mol (1980.0124 without restraints) Performing minimization step: 1499. Total energy = 1979.8959 kcal/mol (1979.8803 without restraints) Performing minimization step: 1500. Total energy = 1979.7639 kcal/mol (1979.7483 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e90c65df/tmp/ENST00000666628_refx/ENST00000666628_refx.pdb ...Done. Performing minimization step: 1501. Total energy = 1979.6320 kcal/mol (1979.6164 without restraints) Performing minimization step: 1502. Total energy = 1979.4999 kcal/mol (1979.4844 without restraints) Performing minimization step: 1503. Total energy = 1979.3681 kcal/mol (1979.3526 without restraints) Performing minimization step: 1504. Total energy = 1979.2368 kcal/mol (1979.2213 without restraints) Performing minimization step: 1505. Total energy = 1979.1050 kcal/mol (1979.0895 without restraints) Performing minimization step: 1506. Total energy = 1978.9734 kcal/mol (1978.9579 without restraints) Performing minimization step: 1507. Total energy = 1978.8422 kcal/mol (1978.8267 without restraints) Performing minimization step: 1508. Total energy = 1978.7106 kcal/mol (1978.6951 without restraints) Performing minimization step: 1509. Total energy = 1978.5792 kcal/mol (1978.5637 without restraints) Performing minimization step: 1510. Total energy = 1978.4481 kcal/mol (1978.4327 without restraints) Performing minimization step: 1511. Total energy = 1978.3170 kcal/mol (1978.3015 without restraints) Performing minimization step: 1512. Total energy = 1978.1859 kcal/mol (1978.1704 without restraints) Performing minimization step: 1513. Total energy = 1978.0549 kcal/mol (1978.0394 without restraints) Performing minimization step: 1514. Total energy = 1977.9239 kcal/mol (1977.9085 without restraints) Performing minimization step: 1515. Total energy = 1977.7926 kcal/mol (1977.7772 without restraints) Performing minimization step: 1516. Total energy = 1977.6619 kcal/mol (1977.6464 without restraints) Performing minimization step: 1517. Total energy = 1977.5312 kcal/mol (1977.5158 without restraints) Performing minimization step: 1518. Total energy = 1977.4008 kcal/mol (1977.3854 without restraints) Performing minimization step: 1519. Total energy = 1977.2703 kcal/mol (1977.2549 without restraints) Performing minimization step: 1520. Total energy = 1977.1398 kcal/mol (1977.1244 without restraints) Performing minimization step: 1521. Total energy = 1977.0094 kcal/mol (1976.9940 without restraints) Performing minimization step: 1522. Total energy = 1976.8789 kcal/mol (1976.8635 without restraints) Performing minimization step: 1523. Total energy = 1976.7486 kcal/mol (1976.7333 without restraints) Performing minimization step: 1524. Total energy = 1976.6185 kcal/mol (1976.6031 without restraints) Performing minimization step: 1525. Total energy = 1976.4882 kcal/mol (1976.4728 without restraints) Performing minimization step: 1526. Total energy = 1976.3579 kcal/mol (1976.3424 without restraints) Performing minimization step: 1527. Total energy = 1976.2277 kcal/mol (1976.2124 without restraints) Performing minimization step: 1528. Total energy = 1976.0982 kcal/mol (1976.0829 without restraints) Performing minimization step: 1529. Total energy = 1975.9691 kcal/mol (1975.9538 without restraints) Performing minimization step: 1530. Total energy = 1975.8394 kcal/mol (1975.8241 without restraints) Performing minimization step: 1531. Total energy = 1975.7097 kcal/mol (1975.6944 without restraints) Performing minimization step: 1532. Total energy = 1975.5801 kcal/mol (1975.5648 without restraints) Performing minimization step: 1533. Total energy = 1975.4503 kcal/mol (1975.4350 without restraints) Performing minimization step: 1534. Total energy = 1975.3208 kcal/mol (1975.3055 without restraints) Performing minimization step: 1535. Total energy = 1975.1914 kcal/mol (1975.1762 without restraints) Performing minimization step: 1536. Total energy = 1975.0618 kcal/mol (1975.0466 without restraints) Performing minimization step: 1537. Total energy = 1974.9326 kcal/mol (1974.9173 without restraints) Performing minimization step: 1538. Total energy = 1974.8034 kcal/mol (1974.7882 without restraints) Performing minimization step: 1539. Total energy = 1974.6743 kcal/mol (1974.6591 without restraints) Performing minimization step: 1540. Total energy = 1974.5453 kcal/mol (1974.5301 without restraints) Performing minimization step: 1541. Total energy = 1974.4167 kcal/mol (1974.4015 without restraints) Performing minimization step: 1542. Total energy = 1974.2878 kcal/mol (1974.2726 without restraints) Performing minimization step: 1543. Total energy = 1974.1591 kcal/mol (1974.1440 without restraints) Performing minimization step: 1544. Total energy = 1974.0304 kcal/mol (1974.0153 without restraints) Performing minimization step: 1545. Total energy = 1973.9017 kcal/mol (1973.8864 without restraints) Performing minimization step: 1546. Total energy = 1973.7730 kcal/mol (1973.7578 without restraints) Performing minimization step: 1547. Total energy = 1973.6444 kcal/mol (1973.6293 without restraints) Performing minimization step: 1548. Total energy = 1973.5159 kcal/mol (1973.5008 without restraints) Performing minimization step: 1549. Total energy = 1973.3874 kcal/mol (1973.3722 without restraints) Performing minimization step: 1550. Total energy = 1973.2590 kcal/mol (1973.2438 without restraints) Performing minimization step: 1551. Total energy = 1973.1307 kcal/mol (1973.1156 without restraints) Performing minimization step: 1552. Total energy = 1973.0025 kcal/mol (1972.9874 without restraints) Performing minimization step: 1553. Total energy = 1972.8743 kcal/mol (1972.8592 without restraints) Performing minimization step: 1554. Total energy = 1972.7463 kcal/mol (1972.7312 without restraints) Performing minimization step: 1555. Total energy = 1972.6183 kcal/mol (1972.6032 without restraints) Performing minimization step: 1556. Total energy = 1972.4906 kcal/mol (1972.4755 without restraints) Performing minimization step: 1557. Total energy = 1972.3626 kcal/mol (1972.3474 without restraints) Performing minimization step: 1558. Total energy = 1972.2347 kcal/mol (1972.2196 without restraints) Performing minimization step: 1559. Total energy = 1972.1070 kcal/mol (1972.0919 without restraints) Performing minimization step: 1560. Total energy = 1971.9794 kcal/mol (1971.9643 without restraints) Performing minimization step: 1561. Total energy = 1971.8518 kcal/mol (1971.8367 without restraints) Performing minimization step: 1562. Total energy = 1971.7241 kcal/mol (1971.7090 without restraints) Performing minimization step: 1563. Total energy = 1971.5966 kcal/mol (1971.5816 without restraints) Performing minimization step: 1564. Total energy = 1971.4688 kcal/mol (1971.4538 without restraints) Performing minimization step: 1565. Total energy = 1971.3417 kcal/mol (1971.3267 without restraints) Performing minimization step: 1566. Total energy = 1971.2144 kcal/mol (1971.1994 without restraints) Performing minimization step: 1567. Total energy = 1971.0873 kcal/mol (1971.0722 without restraints) Performing minimization step: 1568. Total energy = 1970.9601 kcal/mol (1970.9451 without restraints) Performing minimization step: 1569. Total energy = 1970.8331 kcal/mol (1970.8181 without restraints) Performing minimization step: 1570. Total energy = 1970.7060 kcal/mol (1970.6910 without restraints) Performing minimization step: 1571. Total energy = 1970.5793 kcal/mol (1970.5643 without restraints) Performing minimization step: 1572. Total energy = 1970.4524 kcal/mol (1970.4375 without restraints) Performing minimization step: 1573. Total energy = 1970.3256 kcal/mol (1970.3107 without restraints) Performing minimization step: 1574. Total energy = 1970.1989 kcal/mol (1970.1839 without restraints) Performing minimization step: 1575. Total energy = 1970.0718 kcal/mol (1970.0567 without restraints) Performing minimization step: 1576. Total energy = 1969.9450 kcal/mol (1969.9300 without restraints) Performing minimization step: 1577. Total energy = 1969.8187 kcal/mol (1969.8038 without restraints) Performing minimization step: 1578. Total energy = 1969.6923 kcal/mol (1969.6773 without restraints) Performing minimization step: 1579. Total energy = 1969.5656 kcal/mol (1969.5507 without restraints) Performing minimization step: 1580. Total energy = 1969.4392 kcal/mol (1969.4243 without restraints) Performing minimization step: 1581. Total energy = 1969.3129 kcal/mol (1969.2980 without restraints) Performing minimization step: 1582. Total energy = 1969.1859 kcal/mol (1969.1710 without restraints) Performing minimization step: 1583. Total energy = 1969.0595 kcal/mol (1969.0446 without restraints) Performing minimization step: 1584. Total energy = 1968.9330 kcal/mol (1968.9181 without restraints) Performing minimization step: 1585. Total energy = 1968.8070 kcal/mol (1968.7921 without restraints) Performing minimization step: 1586. Total energy = 1968.6813 kcal/mol (1968.6664 without restraints) Performing minimization step: 1587. Total energy = 1968.5556 kcal/mol (1968.5407 without restraints) Performing minimization step: 1588. Total energy = 1968.4297 kcal/mol (1968.4149 without restraints) Performing minimization step: 1589. Total energy = 1968.3041 kcal/mol (1968.2892 without restraints) Performing minimization step: 1590. Total energy = 1968.1786 kcal/mol (1968.1637 without restraints) Performing minimization step: 1591. Total energy = 1968.0530 kcal/mol (1968.0381 without restraints) Performing minimization step: 1592. Total energy = 1967.9274 kcal/mol (1967.9126 without restraints) Performing minimization step: 1593. Total energy = 1967.8019 kcal/mol (1967.7871 without restraints) Performing minimization step: 1594. Total energy = 1967.6762 kcal/mol (1967.6614 without restraints) Performing minimization step: 1595. Total energy = 1967.5508 kcal/mol (1967.5360 without restraints) Performing minimization step: 1596. Total energy = 1967.4252 kcal/mol (1967.4104 without restraints) Performing minimization step: 1597. Total energy = 1967.2998 kcal/mol (1967.2850 without restraints) Performing minimization step: 1598. Total energy = 1967.1746 kcal/mol (1967.1598 without restraints) Performing minimization step: 1599. Total energy = 1967.0493 kcal/mol (1967.0346 without restraints) Performing minimization step: 1600. Total energy = 1966.9242 kcal/mol (1966.9095 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e90c65df/tmp/ENST00000666628_refx/ENST00000666628_refx.pdb ...Done. Performing minimization step: 1601. Total energy = 1966.7992 kcal/mol (1966.7845 without restraints) Performing minimization step: 1602. Total energy = 1966.6743 kcal/mol (1966.6595 without restraints) Performing minimization step: 1603. Total energy = 1966.5493 kcal/mol (1966.5346 without restraints) Performing minimization step: 1604. Total energy = 1966.4246 kcal/mol (1966.4098 without restraints) Performing minimization step: 1605. Total energy = 1966.2998 kcal/mol (1966.2851 without restraints) Performing minimization step: 1606. Total energy = 1966.1749 kcal/mol (1966.1602 without restraints) Performing minimization step: 1607. Total energy = 1966.0503 kcal/mol (1966.0356 without restraints) Performing minimization step: 1608. Total energy = 1965.9254 kcal/mol (1965.9107 without restraints) Performing minimization step: 1609. Total energy = 1965.8004 kcal/mol (1965.7857 without restraints) Performing minimization step: 1610. Total energy = 1965.6760 kcal/mol (1965.6613 without restraints) Performing minimization step: 1611. Total energy = 1965.5515 kcal/mol (1965.5369 without restraints) Performing minimization step: 1612. Total energy = 1965.4269 kcal/mol (1965.4122 without restraints) Performing minimization step: 1613. Total energy = 1965.3027 kcal/mol (1965.2881 without restraints) Performing minimization step: 1614. Total energy = 1965.1785 kcal/mol (1965.1639 without restraints) Performing minimization step: 1615. Total energy = 1965.0543 kcal/mol (1965.0397 without restraints) Performing minimization step: 1616. Total energy = 1964.9302 kcal/mol (1964.9155 without restraints) Performing minimization step: 1617. Total energy = 1964.8060 kcal/mol (1964.7915 without restraints) Performing minimization step: 1618. Total energy = 1964.6821 kcal/mol (1964.6675 without restraints) Performing minimization step: 1619. Total energy = 1964.5582 kcal/mol (1964.5435 without restraints) Performing minimization step: 1620. Total energy = 1964.4343 kcal/mol (1964.4197 without restraints) Performing minimization step: 1621. Total energy = 1964.3109 kcal/mol (1964.2963 without restraints) Performing minimization step: 1622. Total energy = 1964.1871 kcal/mol (1964.1725 without restraints) Performing minimization step: 1623. Total energy = 1964.0634 kcal/mol (1964.0488 without restraints) Performing minimization step: 1624. Total energy = 1963.9397 kcal/mol (1963.9251 without restraints) Performing minimization step: 1625. Total energy = 1963.8162 kcal/mol (1963.8015 without restraints) Performing minimization step: 1626. Total energy = 1963.6925 kcal/mol (1963.6780 without restraints) Performing minimization step: 1627. Total energy = 1963.5691 kcal/mol (1963.5545 without restraints) Performing minimization step: 1628. Total energy = 1963.4465 kcal/mol (1963.4319 without restraints) Performing minimization step: 1629. Total energy = 1963.3230 kcal/mol (1963.3083 without restraints) Performing minimization step: 1630. Total energy = 1963.1997 kcal/mol (1963.1850 without restraints) Performing minimization step: 1631. Total energy = 1963.0763 kcal/mol (1963.0617 without restraints) Performing minimization step: 1632. Total energy = 1962.9531 kcal/mol (1962.9385 without restraints) Performing minimization step: 1633. Total energy = 1962.8299 kcal/mol (1962.8155 without restraints) Performing minimization step: 1634. Total energy = 1962.7070 kcal/mol (1962.6924 without restraints) Performing minimization step: 1635. Total energy = 1962.5837 kcal/mol (1962.5692 without restraints) Performing minimization step: 1636. Total energy = 1962.4608 kcal/mol (1962.4463 without restraints) Performing minimization step: 1637. Total energy = 1962.3379 kcal/mol (1962.3234 without restraints) Performing minimization step: 1638. Total energy = 1962.2152 kcal/mol (1962.2006 without restraints) Performing minimization step: 1639. Total energy = 1962.0924 kcal/mol (1962.0779 without restraints) Performing minimization step: 1640. Total energy = 1961.9695 kcal/mol (1961.9550 without restraints) Performing minimization step: 1641. Total energy = 1961.8466 kcal/mol (1961.8321 without restraints) Performing minimization step: 1642. Total energy = 1961.7241 kcal/mol (1961.7097 without restraints) Performing minimization step: 1643. Total energy = 1961.6016 kcal/mol (1961.5871 without restraints) Performing minimization step: 1644. Total energy = 1961.4791 kcal/mol (1961.4646 without restraints) Performing minimization step: 1645. Total energy = 1961.3566 kcal/mol (1961.3422 without restraints) Performing minimization step: 1646. Total energy = 1961.2345 kcal/mol (1961.2202 without restraints) Performing minimization step: 1647. Total energy = 1961.1123 kcal/mol (1961.0978 without restraints) Performing minimization step: 1648. Total energy = 1960.9898 kcal/mol (1960.9753 without restraints) Performing minimization step: 1649. Total energy = 1960.8673 kcal/mol (1960.8529 without restraints) Performing minimization step: 1650. Total energy = 1960.7452 kcal/mol (1960.7308 without restraints) Performing minimization step: 1651. Total energy = 1960.6230 kcal/mol (1960.6086 without restraints) Performing minimization step: 1652. Total energy = 1960.5007 kcal/mol (1960.4863 without restraints) Performing minimization step: 1653. Total energy = 1960.3785 kcal/mol (1960.3641 without restraints) Performing minimization step: 1654. Total energy = 1960.2565 kcal/mol (1960.2421 without restraints) Performing minimization step: 1655. Total energy = 1960.1346 kcal/mol (1960.1202 without restraints) Performing minimization step: 1656. Total energy = 1960.0128 kcal/mol (1959.9984 without restraints) Performing minimization step: 1657. Total energy = 1959.8910 kcal/mol (1959.8767 without restraints) Performing minimization step: 1658. Total energy = 1959.7695 kcal/mol (1959.7551 without restraints) Performing minimization step: 1659. Total energy = 1959.6477 kcal/mol (1959.6335 without restraints) Performing minimization step: 1660. Total energy = 1959.5262 kcal/mol (1959.5118 without restraints) Performing minimization step: 1661. Total energy = 1959.4046 kcal/mol (1959.3903 without restraints) Performing minimization step: 1662. Total energy = 1959.2831 kcal/mol (1959.2688 without restraints) Performing minimization step: 1663. Total energy = 1959.1616 kcal/mol (1959.1473 without restraints) Performing minimization step: 1664. Total energy = 1959.0401 kcal/mol (1959.0259 without restraints) Performing minimization step: 1665. Total energy = 1958.9187 kcal/mol (1958.9044 without restraints) Performing minimization step: 1666. Total energy = 1958.7972 kcal/mol (1958.7829 without restraints) Performing minimization step: 1667. Total energy = 1958.6756 kcal/mol (1958.6613 without restraints) Performing minimization step: 1668. Total energy = 1958.5545 kcal/mol (1958.5402 without restraints) Performing minimization step: 1669. Total energy = 1958.4334 kcal/mol (1958.4190 without restraints) Performing minimization step: 1670. Total energy = 1958.3123 kcal/mol (1958.2980 without restraints) Performing minimization step: 1671. Total energy = 1958.1913 kcal/mol (1958.1770 without restraints) Performing minimization step: 1672. Total energy = 1958.0705 kcal/mol (1958.0562 without restraints) Performing minimization step: 1673. Total energy = 1957.9496 kcal/mol (1957.9354 without restraints) Performing minimization step: 1674. Total energy = 1957.8288 kcal/mol (1957.8145 without restraints) Performing minimization step: 1675. Total energy = 1957.7080 kcal/mol (1957.6937 without restraints) Performing minimization step: 1676. Total energy = 1957.5871 kcal/mol (1957.5727 without restraints) Performing minimization step: 1677. Total energy = 1957.4664 kcal/mol (1957.4522 without restraints) Performing minimization step: 1678. Total energy = 1957.3458 kcal/mol (1957.3316 without restraints) Performing minimization step: 1679. Total energy = 1957.2252 kcal/mol (1957.2110 without restraints) Performing minimization step: 1680. Total energy = 1957.1047 kcal/mol (1957.0905 without restraints) Performing minimization step: 1681. Total energy = 1956.9842 kcal/mol (1956.9700 without restraints) Performing minimization step: 1682. Total energy = 1956.8640 kcal/mol (1956.8498 without restraints) Performing minimization step: 1683. Total energy = 1956.7436 kcal/mol (1956.7294 without restraints) Performing minimization step: 1684. Total energy = 1956.6233 kcal/mol (1956.6091 without restraints) Performing minimization step: 1685. Total energy = 1956.5030 kcal/mol (1956.4888 without restraints) Performing minimization step: 1686. Total energy = 1956.3825 kcal/mol (1956.3683 without restraints) Performing minimization step: 1687. Total energy = 1956.2624 kcal/mol (1956.2482 without restraints) Performing minimization step: 1688. Total energy = 1956.1420 kcal/mol (1956.1278 without restraints) Performing minimization step: 1689. Total energy = 1956.0221 kcal/mol (1956.0079 without restraints) Performing minimization step: 1690. Total energy = 1955.9020 kcal/mol (1955.8879 without restraints) Performing minimization step: 1691. Total energy = 1955.7821 kcal/mol (1955.7679 without restraints) Performing minimization step: 1692. Total energy = 1955.6620 kcal/mol (1955.6478 without restraints) Performing minimization step: 1693. Total energy = 1955.5421 kcal/mol (1955.5279 without restraints) Performing minimization step: 1694. Total energy = 1955.4220 kcal/mol (1955.4079 without restraints) Performing minimization step: 1695. Total energy = 1955.3020 kcal/mol (1955.2879 without restraints) Performing minimization step: 1696. Total energy = 1955.1824 kcal/mol (1955.1682 without restraints) Performing minimization step: 1697. Total energy = 1955.0627 kcal/mol (1955.0486 without restraints) Performing minimization step: 1698. Total energy = 1954.9431 kcal/mol (1954.9290 without restraints) Performing minimization step: 1699. Total energy = 1954.8232 kcal/mol (1954.8091 without restraints) Performing minimization step: 1700. Total energy = 1954.7037 kcal/mol (1954.6896 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e90c65df/tmp/ENST00000666628_refx/ENST00000666628_refx.pdb ...Done. Performing minimization step: 1701. Total energy = 1954.5843 kcal/mol (1954.5702 without restraints) Performing minimization step: 1702. Total energy = 1954.4647 kcal/mol (1954.4506 without restraints) Performing minimization step: 1703. Total energy = 1954.3454 kcal/mol (1954.3313 without restraints) Performing minimization step: 1704. Total energy = 1954.2261 kcal/mol (1954.2120 without restraints) Performing minimization step: 1705. Total energy = 1954.1070 kcal/mol (1954.0928 without restraints) Performing minimization step: 1706. Total energy = 1953.9879 kcal/mol (1953.9738 without restraints) Performing minimization step: 1707. Total energy = 1953.8690 kcal/mol (1953.8549 without restraints) Performing minimization step: 1708. Total energy = 1953.7499 kcal/mol (1953.7358 without restraints) Performing minimization step: 1709. Total energy = 1953.6305 kcal/mol (1953.6164 without restraints) Performing minimization step: 1710. Total energy = 1953.5116 kcal/mol (1953.4978 without restraints) Performing minimization step: 1711. Total energy = 1953.3929 kcal/mol (1953.3788 without restraints) Performing minimization step: 1712. Total energy = 1953.2740 kcal/mol (1953.2600 without restraints) Performing minimization step: 1713. Total energy = 1953.1552 kcal/mol (1953.1411 without restraints) Performing minimization step: 1714. Total energy = 1953.0364 kcal/mol (1953.0223 without restraints) Performing minimization step: 1715. Total energy = 1952.9177 kcal/mol (1952.9036 without restraints) Performing minimization step: 1716. Total energy = 1952.7992 kcal/mol (1952.7852 without restraints) Performing minimization step: 1717. Total energy = 1952.6803 kcal/mol (1952.6663 without restraints) Performing minimization step: 1718. Total energy = 1952.5615 kcal/mol (1952.5475 without restraints) Performing minimization step: 1719. Total energy = 1952.4430 kcal/mol (1952.4290 without restraints) Performing minimization step: 1720. Total energy = 1952.3244 kcal/mol (1952.3105 without restraints) Performing minimization step: 1721. Total energy = 1952.2064 kcal/mol (1952.1924 without restraints) Performing minimization step: 1722. Total energy = 1952.0882 kcal/mol (1952.0742 without restraints) Performing minimization step: 1723. Total energy = 1951.9700 kcal/mol (1951.9561 without restraints) Performing minimization step: 1724. Total energy = 1951.8514 kcal/mol (1951.8374 without restraints) Performing minimization step: 1725. Total energy = 1951.7331 kcal/mol (1951.7192 without restraints) Performing minimization step: 1726. Total energy = 1951.6149 kcal/mol (1951.6010 without restraints) Performing minimization step: 1727. Total energy = 1951.4968 kcal/mol (1951.4829 without restraints) Performing minimization step: 1728. Total energy = 1951.3786 kcal/mol (1951.3647 without restraints) Performing minimization step: 1729. Total energy = 1951.2606 kcal/mol (1951.2466 without restraints) Performing minimization step: 1730. Total energy = 1951.1425 kcal/mol (1951.1286 without restraints) Performing minimization step: 1731. Total energy = 1951.0244 kcal/mol (1951.0104 without restraints) Performing minimization step: 1732. Total energy = 1950.9064 kcal/mol (1950.8925 without restraints) Performing minimization step: 1733. Total energy = 1950.7885 kcal/mol (1950.7746 without restraints) Performing minimization step: 1734. Total energy = 1950.6707 kcal/mol (1950.6568 without restraints) Performing minimization step: 1735. Total energy = 1950.5527 kcal/mol (1950.5388 without restraints) Performing minimization step: 1736. Total energy = 1950.4348 kcal/mol (1950.4210 without restraints) Performing minimization step: 1737. Total energy = 1950.3172 kcal/mol (1950.3033 without restraints) Performing minimization step: 1738. Total energy = 1950.1996 kcal/mol (1950.1857 without restraints) Performing minimization step: 1739. Total energy = 1950.0819 kcal/mol (1950.0681 without restraints) Performing minimization step: 1740. Total energy = 1949.9646 kcal/mol (1949.9507 without restraints) Performing minimization step: 1741. Total energy = 1949.8471 kcal/mol (1949.8333 without restraints) Performing minimization step: 1742. Total energy = 1949.7298 kcal/mol (1949.7159 without restraints) Performing minimization step: 1743. Total energy = 1949.6125 kcal/mol (1949.5986 without restraints) Performing minimization step: 1744. Total energy = 1949.4950 kcal/mol (1949.4811 without restraints) Performing minimization step: 1745. Total energy = 1949.3777 kcal/mol (1949.3638 without restraints) Performing minimization step: 1746. Total energy = 1949.2604 kcal/mol (1949.2466 without restraints) Performing minimization step: 1747. Total energy = 1949.1439 kcal/mol (1949.1301 without restraints) Performing minimization step: 1748. Total energy = 1949.0268 kcal/mol (1949.0129 without restraints) Performing minimization step: 1749. Total energy = 1948.9095 kcal/mol (1948.8957 without restraints) Performing minimization step: 1750. Total energy = 1948.7925 kcal/mol (1948.7787 without restraints) Performing minimization step: 1751. Total energy = 1948.6756 kcal/mol (1948.6618 without restraints) Performing minimization step: 1752. Total energy = 1948.5585 kcal/mol (1948.5448 without restraints) Performing minimization step: 1753. Total energy = 1948.4417 kcal/mol (1948.4279 without restraints) Performing minimization step: 1754. Total energy = 1948.3249 kcal/mol (1948.3111 without restraints) Performing minimization step: 1755. Total energy = 1948.2081 kcal/mol (1948.1943 without restraints) Performing minimization step: 1756. Total energy = 1948.0913 kcal/mol (1948.0776 without restraints) Performing minimization step: 1757. Total energy = 1947.9743 kcal/mol (1947.9605 without restraints) Performing minimization step: 1758. Total energy = 1947.8576 kcal/mol (1947.8438 without restraints) Performing minimization step: 1759. Total energy = 1947.7406 kcal/mol (1947.7269 without restraints) Performing minimization step: 1760. Total energy = 1947.6239 kcal/mol (1947.6101 without restraints) Performing minimization step: 1761. Total energy = 1947.5074 kcal/mol (1947.4937 without restraints) Performing minimization step: 1762. Total energy = 1947.3910 kcal/mol (1947.3772 without restraints) Performing minimization step: 1763. Total energy = 1947.2746 kcal/mol (1947.2608 without restraints) Performing minimization step: 1764. Total energy = 1947.1582 kcal/mol (1947.1445 without restraints) Performing minimization step: 1765. Total energy = 1947.0419 kcal/mol (1947.0282 without restraints) Performing minimization step: 1766. Total energy = 1946.9254 kcal/mol (1946.9117 without restraints) Performing minimization step: 1767. Total energy = 1946.8095 kcal/mol (1946.7957 without restraints) Performing minimization step: 1768. Total energy = 1946.6933 kcal/mol (1946.6796 without restraints) Performing minimization step: 1769. Total energy = 1946.5771 kcal/mol (1946.5633 without restraints) Performing minimization step: 1770. Total energy = 1946.4611 kcal/mol (1946.4474 without restraints) Performing minimization step: 1771. Total energy = 1946.3450 kcal/mol (1946.3313 without restraints) Performing minimization step: 1772. Total energy = 1946.2290 kcal/mol (1946.2153 without restraints) Performing minimization step: 1773. Total energy = 1946.1130 kcal/mol (1946.0993 without restraints) Performing minimization step: 1774. Total energy = 1945.9971 kcal/mol (1945.9834 without restraints) Performing minimization step: 1775. Total energy = 1945.8810 kcal/mol (1945.8671 without restraints) Performing minimization step: 1776. Total energy = 1945.7647 kcal/mol (1945.7511 without restraints) Performing minimization step: 1777. Total energy = 1945.6489 kcal/mol (1945.6353 without restraints) Performing minimization step: 1778. Total energy = 1945.5334 kcal/mol (1945.5198 without restraints) Performing minimization step: 1779. Total energy = 1945.4177 kcal/mol (1945.4041 without restraints) Performing minimization step: 1780. Total energy = 1945.3018 kcal/mol (1945.2880 without restraints) Performing minimization step: 1781. Total energy = 1945.1861 kcal/mol (1945.1724 without restraints) Performing minimization step: 1782. Total energy = 1945.0707 kcal/mol (1945.0571 without restraints) Performing minimization step: 1783. Total energy = 1944.9550 kcal/mol (1944.9414 without restraints) Performing minimization step: 1784. Total energy = 1944.8394 kcal/mol (1944.8258 without restraints) Performing minimization step: 1785. Total energy = 1944.7236 kcal/mol (1944.7100 without restraints) Performing minimization step: 1786. Total energy = 1944.6083 kcal/mol (1944.5946 without restraints) Performing minimization step: 1787. Total energy = 1944.4931 kcal/mol (1944.4795 without restraints) Performing minimization step: 1788. Total energy = 1944.3778 kcal/mol (1944.3642 without restraints) Performing minimization step: 1789. Total energy = 1944.2626 kcal/mol (1944.2490 without restraints) Performing minimization step: 1790. Total energy = 1944.1474 kcal/mol (1944.1339 without restraints) Performing minimization step: 1791. Total energy = 1944.0323 kcal/mol (1944.0187 without restraints) Performing minimization step: 1792. Total energy = 1943.9172 kcal/mol (1943.9036 without restraints) Performing minimization step: 1793. Total energy = 1943.8019 kcal/mol (1943.7884 without restraints) Performing minimization step: 1794. Total energy = 1943.6869 kcal/mol (1943.6734 without restraints) Performing minimization step: 1795. Total energy = 1943.5720 kcal/mol (1943.5584 without restraints) Performing minimization step: 1796. Total energy = 1943.4571 kcal/mol (1943.4435 without restraints) Performing minimization step: 1797. Total energy = 1943.3422 kcal/mol (1943.3286 without restraints) Performing minimization step: 1798. Total energy = 1943.2274 kcal/mol (1943.2138 without restraints) Performing minimization step: 1799. Total energy = 1943.1125 kcal/mol (1943.0990 without restraints) Performing minimization step: 1800. Total energy = 1942.9981 kcal/mol (1942.9845 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e90c65df/tmp/ENST00000666628_refx/ENST00000666628_refx.pdb ...Done. Performing minimization step: 1801. Total energy = 1942.8834 kcal/mol (1942.8698 without restraints) Performing minimization step: 1802. Total energy = 1942.7682 kcal/mol (1942.7546 without restraints) Performing minimization step: 1803. Total energy = 1942.6536 kcal/mol (1942.6400 without restraints) Performing minimization step: 1804. Total energy = 1942.5390 kcal/mol (1942.5255 without restraints) Performing minimization step: 1805. Total energy = 1942.4245 kcal/mol (1942.4110 without restraints) Performing minimization step: 1806. Total energy = 1942.3101 kcal/mol (1942.2966 without restraints) Performing minimization step: 1807. Total energy = 1942.1959 kcal/mol (1942.1824 without restraints) Performing minimization step: 1808. Total energy = 1942.0814 kcal/mol (1942.0677 without restraints) Performing minimization step: 1809. Total energy = 1941.9668 kcal/mol (1941.9533 without restraints) Performing minimization step: 1810. Total energy = 1941.8520 kcal/mol (1941.8382 without restraints) Performing minimization step: 1811. Total energy = 1941.7372 kcal/mol (1941.7237 without restraints) Performing minimization step: 1812. Total energy = 1941.6230 kcal/mol (1941.6095 without restraints) Performing minimization step: 1813. Total energy = 1941.5089 kcal/mol (1941.4954 without restraints) Performing minimization step: 1814. Total energy = 1941.3949 kcal/mol (1941.3815 without restraints) Performing minimization step: 1815. Total energy = 1941.2808 kcal/mol (1941.2672 without restraints) Performing minimization step: 1816. Total energy = 1941.1666 kcal/mol (1941.1532 without restraints) Performing minimization step: 1817. Total energy = 1941.0526 kcal/mol (1941.0392 without restraints) Performing minimization step: 1818. Total energy = 1940.9389 kcal/mol (1940.9255 without restraints) Performing minimization step: 1819. Total energy = 1940.8250 kcal/mol (1940.8116 without restraints) Performing minimization step: 1820. Total energy = 1940.7113 kcal/mol (1940.6977 without restraints) Performing minimization step: 1821. Total energy = 1940.5973 kcal/mol (1940.5839 without restraints) Performing minimization step: 1822. Total energy = 1940.4835 kcal/mol (1940.4701 without restraints) Performing minimization step: 1823. Total energy = 1940.3703 kcal/mol (1940.3568 without restraints) Performing minimization step: 1824. Total energy = 1940.2566 kcal/mol (1940.2432 without restraints) Performing minimization step: 1825. Total energy = 1940.1429 kcal/mol (1940.1293 without restraints) Performing minimization step: 1826. Total energy = 1940.0296 kcal/mol (1940.0162 without restraints) Performing minimization step: 1827. Total energy = 1939.9159 kcal/mol (1939.9025 without restraints) Performing minimization step: 1828. Total energy = 1939.8024 kcal/mol (1939.7890 without restraints) Performing minimization step: 1829. Total energy = 1939.6887 kcal/mol (1939.6753 without restraints) Performing minimization step: 1830. Total energy = 1939.5752 kcal/mol (1939.5617 without restraints) Performing minimization step: 1831. Total energy = 1939.4619 kcal/mol (1939.4486 without restraints) Performing minimization step: 1832. Total energy = 1939.3486 kcal/mol (1939.3352 without restraints) Performing minimization step: 1833. Total energy = 1939.2353 kcal/mol (1939.2220 without restraints) Performing minimization step: 1834. Total energy = 1939.1223 kcal/mol (1939.1090 without restraints) Performing minimization step: 1835. Total energy = 1939.0089 kcal/mol (1938.9954 without restraints) Performing minimization step: 1836. Total energy = 1938.8956 kcal/mol (1938.8823 without restraints) Performing minimization step: 1837. Total energy = 1938.7825 kcal/mol (1938.7692 without restraints) Performing minimization step: 1838. Total energy = 1938.6697 kcal/mol (1938.6563 without restraints) Performing minimization step: 1839. Total energy = 1938.5567 kcal/mol (1938.5433 without restraints) Performing minimization step: 1840. Total energy = 1938.4437 kcal/mol (1938.4303 without restraints) Performing minimization step: 1841. Total energy = 1938.3307 kcal/mol (1938.3174 without restraints) Performing minimization step: 1842. Total energy = 1938.2181 kcal/mol (1938.2048 without restraints) Performing minimization step: 1843. Total energy = 1938.1053 kcal/mol (1938.0919 without restraints) Performing minimization step: 1844. Total energy = 1937.9920 kcal/mol (1937.9787 without restraints) Performing minimization step: 1845. Total energy = 1937.8793 kcal/mol (1937.8660 without restraints) Performing minimization step: 1846. Total energy = 1937.7666 kcal/mol (1937.7533 without restraints) Performing minimization step: 1847. Total energy = 1937.6538 kcal/mol (1937.6404 without restraints) Performing minimization step: 1848. Total energy = 1937.5412 kcal/mol (1937.5279 without restraints) Performing minimization step: 1849. Total energy = 1937.4283 kcal/mol (1937.4151 without restraints) Performing minimization step: 1850. Total energy = 1937.3156 kcal/mol (1937.3022 without restraints) Performing minimization step: 1851. Total energy = 1937.2030 kcal/mol (1937.1897 without restraints) Performing minimization step: 1852. Total energy = 1937.0905 kcal/mol (1937.0772 without restraints) Performing minimization step: 1853. Total energy = 1936.9781 kcal/mol (1936.9648 without restraints) Performing minimization step: 1854. Total energy = 1936.8657 kcal/mol (1936.8524 without restraints) Performing minimization step: 1855. Total energy = 1936.7534 kcal/mol (1936.7401 without restraints) Performing minimization step: 1856. Total energy = 1936.6411 kcal/mol (1936.6278 without restraints) Performing minimization step: 1857. Total energy = 1936.5288 kcal/mol (1936.5155 without restraints) Performing minimization step: 1858. Total energy = 1936.4166 kcal/mol (1936.4034 without restraints) Performing minimization step: 1859. Total energy = 1936.3048 kcal/mol (1936.2916 without restraints) Performing minimization step: 1860. Total energy = 1936.1926 kcal/mol (1936.1794 without restraints) Performing minimization step: 1861. Total energy = 1936.0805 kcal/mol (1936.0673 without restraints) Performing minimization step: 1862. Total energy = 1935.9686 kcal/mol (1935.9553 without restraints) Performing minimization step: 1863. Total energy = 1935.8565 kcal/mol (1935.8433 without restraints) Performing minimization step: 1864. Total energy = 1935.7445 kcal/mol (1935.7313 without restraints) Performing minimization step: 1865. Total energy = 1935.6325 kcal/mol (1935.6193 without restraints) Performing minimization step: 1866. Total energy = 1935.5204 kcal/mol (1935.5072 without restraints) Performing minimization step: 1867. Total energy = 1935.4084 kcal/mol (1935.3952 without restraints) Performing minimization step: 1868. Total energy = 1935.2967 kcal/mol (1935.2835 without restraints) Performing minimization step: 1869. Total energy = 1935.1848 kcal/mol (1935.1714 without restraints) Performing minimization step: 1870. Total energy = 1935.0731 kcal/mol (1935.0599 without restraints) Performing minimization step: 1871. Total energy = 1934.9614 kcal/mol (1934.9483 without restraints) Performing minimization step: 1872. Total energy = 1934.8496 kcal/mol (1934.8365 without restraints) Performing minimization step: 1873. Total energy = 1934.7381 kcal/mol (1934.7249 without restraints) Performing minimization step: 1874. Total energy = 1934.6265 kcal/mol (1934.6134 without restraints) Performing minimization step: 1875. Total energy = 1934.5150 kcal/mol (1934.5019 without restraints) Performing minimization step: 1876. Total energy = 1934.4036 kcal/mol (1934.3904 without restraints) Performing minimization step: 1877. Total energy = 1934.2920 kcal/mol (1934.2788 without restraints) Performing minimization step: 1878. Total energy = 1934.1806 kcal/mol (1934.1674 without restraints) Performing minimization step: 1879. Total energy = 1934.0694 kcal/mol (1934.0563 without restraints) Performing minimization step: 1880. Total energy = 1933.9579 kcal/mol (1933.9448 without restraints) Performing minimization step: 1881. Total energy = 1933.8467 kcal/mol (1933.8336 without restraints) Performing minimization step: 1882. Total energy = 1933.7355 kcal/mol (1933.7224 without restraints) Performing minimization step: 1883. Total energy = 1933.6244 kcal/mol (1933.6113 without restraints) Performing minimization step: 1884. Total energy = 1933.5133 kcal/mol (1933.5002 without restraints) Performing minimization step: 1885. Total energy = 1933.4022 kcal/mol (1933.3891 without restraints) Performing minimization step: 1886. Total energy = 1933.2912 kcal/mol (1933.2781 without restraints) Performing minimization step: 1887. Total energy = 1933.1804 kcal/mol (1933.1673 without restraints) Performing minimization step: 1888. Total energy = 1933.0695 kcal/mol (1933.0564 without restraints) Performing minimization step: 1889. Total energy = 1932.9586 kcal/mol (1932.9456 without restraints) Performing minimization step: 1890. Total energy = 1932.8478 kcal/mol (1932.8347 without restraints) Performing minimization step: 1891. Total energy = 1932.7371 kcal/mol (1932.7240 without restraints) Performing minimization step: 1892. Total energy = 1932.6264 kcal/mol (1932.6134 without restraints) Performing minimization step: 1893. Total energy = 1932.5158 kcal/mol (1932.5027 without restraints) Performing minimization step: 1894. Total energy = 1932.4048 kcal/mol (1932.3914 without restraints) Performing minimization step: 1895. Total energy = 1932.2934 kcal/mol (1932.2804 without restraints) Performing minimization step: 1896. Total energy = 1932.1828 kcal/mol (1932.1697 without restraints) Performing minimization step: 1897. Total energy = 1932.0724 kcal/mol (1932.0594 without restraints) Performing minimization step: 1898. Total energy = 1931.9619 kcal/mol (1931.9488 without restraints) Performing minimization step: 1899. Total energy = 1931.8514 kcal/mol (1931.8383 without restraints) Performing minimization step: 1900. Total energy = 1931.7412 kcal/mol (1931.7281 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e90c65df/tmp/ENST00000666628_refx/ENST00000666628_refx.pdb ...Done. Performing minimization step: 1901. Total energy = 1931.6308 kcal/mol (1931.6177 without restraints) Performing minimization step: 1902. Total energy = 1931.5204 kcal/mol (1931.5074 without restraints) Performing minimization step: 1903. Total energy = 1931.4101 kcal/mol (1931.3971 without restraints) Performing minimization step: 1904. Total energy = 1931.2997 kcal/mol (1931.2866 without restraints) Performing minimization step: 1905. Total energy = 1931.1892 kcal/mol (1931.1762 without restraints) Performing minimization step: 1906. Total energy = 1931.0792 kcal/mol (1931.0662 without restraints) Performing minimization step: 1907. Total energy = 1930.9691 kcal/mol (1930.9560 without restraints) Performing minimization step: 1908. Total energy = 1930.8586 kcal/mol (1930.8456 without restraints) Performing minimization step: 1909. Total energy = 1930.7486 kcal/mol (1930.7356 without restraints) Performing minimization step: 1910. Total energy = 1930.6383 kcal/mol (1930.6253 without restraints) Performing minimization step: 1911. Total energy = 1930.5282 kcal/mol (1930.5152 without restraints) Performing minimization step: 1912. Total energy = 1930.4182 kcal/mol (1930.4053 without restraints) Performing minimization step: 1913. Total energy = 1930.3083 kcal/mol (1930.2953 without restraints) Performing minimization step: 1914. Total energy = 1930.1984 kcal/mol (1930.1854 without restraints) Performing minimization step: 1915. Total energy = 1930.0886 kcal/mol (1930.0757 without restraints) Performing minimization step: 1916. Total energy = 1929.9790 kcal/mol (1929.9660 without restraints) Performing minimization step: 1917. Total energy = 1929.8690 kcal/mol (1929.8561 without restraints) Performing minimization step: 1918. Total energy = 1929.7593 kcal/mol (1929.7464 without restraints) Performing minimization step: 1919. Total energy = 1929.6496 kcal/mol (1929.6367 without restraints) Performing minimization step: 1920. Total energy = 1929.5400 kcal/mol (1929.5271 without restraints) Performing minimization step: 1921. Total energy = 1929.4304 kcal/mol (1929.4175 without restraints) Performing minimization step: 1922. Total energy = 1929.3209 kcal/mol (1929.3079 without restraints) Performing minimization step: 1923. Total energy = 1929.2113 kcal/mol (1929.1984 without restraints) Performing minimization step: 1924. Total energy = 1929.1017 kcal/mol (1929.0888 without restraints) Performing minimization step: 1925. Total energy = 1928.9926 kcal/mol (1928.9797 without restraints) Performing minimization step: 1926. Total energy = 1928.8832 kcal/mol (1928.8703 without restraints) Performing minimization step: 1927. Total energy = 1928.7737 kcal/mol (1928.7606 without restraints) Performing minimization step: 1928. Total energy = 1928.6640 kcal/mol (1928.6511 without restraints) Performing minimization step: 1929. Total energy = 1928.5545 kcal/mol (1928.5416 without restraints) Performing minimization step: 1930. Total energy = 1928.4454 kcal/mol (1928.4326 without restraints) Performing minimization step: 1931. Total energy = 1928.3360 kcal/mol (1928.3232 without restraints) Performing minimization step: 1932. Total energy = 1928.2267 kcal/mol (1928.2138 without restraints) Performing minimization step: 1933. Total energy = 1928.1175 kcal/mol (1928.1045 without restraints) Performing minimization step: 1934. Total energy = 1928.0081 kcal/mol (1927.9952 without restraints) Performing minimization step: 1935. Total energy = 1927.8991 kcal/mol (1927.8863 without restraints) Performing minimization step: 1936. Total energy = 1927.7901 kcal/mol (1927.7773 without restraints) Performing minimization step: 1937. Total energy = 1927.6811 kcal/mol (1927.6681 without restraints) Performing minimization step: 1938. Total energy = 1927.5721 kcal/mol (1927.5592 without restraints) Performing minimization step: 1939. Total energy = 1927.4630 kcal/mol (1927.4501 without restraints) Performing minimization step: 1940. Total energy = 1927.3541 kcal/mol (1927.3413 without restraints) Performing minimization step: 1941. Total energy = 1927.2451 kcal/mol (1927.2323 without restraints) Performing minimization step: 1942. Total energy = 1927.1362 kcal/mol (1927.1234 without restraints) Performing minimization step: 1943. Total energy = 1927.0277 kcal/mol (1927.0149 without restraints) Performing minimization step: 1944. Total energy = 1926.9191 kcal/mol (1926.9062 without restraints) Performing minimization step: 1945. Total energy = 1926.8104 kcal/mol (1926.7976 without restraints) Performing minimization step: 1946. Total energy = 1926.7018 kcal/mol (1926.6890 without restraints) Performing minimization step: 1947. Total energy = 1926.5931 kcal/mol (1926.5804 without restraints) Performing minimization step: 1948. Total energy = 1926.4847 kcal/mol (1926.4719 without restraints) Performing minimization step: 1949. Total energy = 1926.3762 kcal/mol (1926.3634 without restraints) Performing minimization step: 1950. Total energy = 1926.2678 kcal/mol (1926.2550 without restraints) Performing minimization step: 1951. Total energy = 1926.1594 kcal/mol (1926.1466 without restraints) Performing minimization step: 1952. Total energy = 1926.0515 kcal/mol (1926.0388 without restraints) Performing minimization step: 1953. Total energy = 1925.9430 kcal/mol (1925.9302 without restraints) Performing minimization step: 1954. Total energy = 1925.8345 kcal/mol (1925.8217 without restraints) Performing minimization step: 1955. Total energy = 1925.7263 kcal/mol (1925.7135 without restraints) Performing minimization step: 1956. Total energy = 1925.6181 kcal/mol (1925.6053 without restraints) Performing minimization step: 1957. Total energy = 1925.5100 kcal/mol (1925.4972 without restraints) Performing minimization step: 1958. Total energy = 1925.4018 kcal/mol (1925.3891 without restraints) Performing minimization step: 1959. Total energy = 1925.2938 kcal/mol (1925.2810 without restraints) Performing minimization step: 1960. Total energy = 1925.1857 kcal/mol (1925.1730 without restraints) Performing minimization step: 1961. Total energy = 1925.0777 kcal/mol (1925.0650 without restraints) Performing minimization step: 1962. Total energy = 1924.9698 kcal/mol (1924.9570 without restraints) Performing minimization step: 1963. Total energy = 1924.8618 kcal/mol (1924.8491 without restraints) Performing minimization step: 1964. Total energy = 1924.7539 kcal/mol (1924.7412 without restraints) Performing minimization step: 1965. Total energy = 1924.6461 kcal/mol (1924.6334 without restraints) Performing minimization step: 1966. Total energy = 1924.5385 kcal/mol (1924.5257 without restraints) Performing minimization step: 1967. Total energy = 1924.4304 kcal/mol (1924.4177 without restraints) Performing minimization step: 1968. Total energy = 1924.3227 kcal/mol (1924.3100 without restraints) Performing minimization step: 1969. Total energy = 1924.2150 kcal/mol (1924.2023 without restraints) Performing minimization step: 1970. Total energy = 1924.1073 kcal/mol (1924.0946 without restraints) Performing minimization step: 1971. Total energy = 1923.9997 kcal/mol (1923.9870 without restraints) Performing minimization step: 1972. Total energy = 1923.8919 kcal/mol (1923.8792 without restraints) Performing minimization step: 1973. Total energy = 1923.7844 kcal/mol (1923.7717 without restraints) Performing minimization step: 1974. Total energy = 1923.6769 kcal/mol (1923.6642 without restraints) Performing minimization step: 1975. Total energy = 1923.5695 kcal/mol (1923.5568 without restraints) Performing minimization step: 1976. Total energy = 1923.4619 kcal/mol (1923.4493 without restraints) Performing minimization step: 1977. Total energy = 1923.3545 kcal/mol (1923.3419 without restraints) Performing minimization step: 1978. Total energy = 1923.2472 kcal/mol (1923.2345 without restraints) Performing minimization step: 1979. Total energy = 1923.1399 kcal/mol (1923.1273 without restraints) Performing minimization step: 1980. Total energy = 1923.0327 kcal/mol (1923.0200 without restraints) Performing minimization step: 1981. Total energy = 1922.9253 kcal/mol (1922.9126 without restraints) Performing minimization step: 1982. Total energy = 1922.8181 kcal/mol (1922.8054 without restraints) Performing minimization step: 1983. Total energy = 1922.7110 kcal/mol (1922.6983 without restraints) Performing minimization step: 1984. Total energy = 1922.6039 kcal/mol (1922.5912 without restraints) Performing minimization step: 1985. Total energy = 1922.4968 kcal/mol (1922.4842 without restraints) Performing minimization step: 1986. Total energy = 1922.3899 kcal/mol (1922.3772 without restraints) Performing minimization step: 1987. Total energy = 1922.2828 kcal/mol (1922.2700 without restraints) Performing minimization step: 1988. Total energy = 1922.1756 kcal/mol (1922.1629 without restraints) Performing minimization step: 1989. Total energy = 1922.0686 kcal/mol (1922.0560 without restraints) Performing minimization step: 1990. Total energy = 1921.9617 kcal/mol (1921.9491 without restraints) Performing minimization step: 1991. Total energy = 1921.8549 kcal/mol (1921.8423 without restraints) Performing minimization step: 1992. Total energy = 1921.7481 kcal/mol (1921.7355 without restraints) Performing minimization step: 1993. Total energy = 1921.6416 kcal/mol (1921.6290 without restraints) Performing minimization step: 1994. Total energy = 1921.5349 kcal/mol (1921.5223 without restraints) Performing minimization step: 1995. Total energy = 1921.4283 kcal/mol (1921.4157 without restraints) Performing minimization step: 1996. Total energy = 1921.3215 kcal/mol (1921.3089 without restraints) Performing minimization step: 1997. Total energy = 1921.2147 kcal/mol (1921.2021 without restraints) Performing minimization step: 1998. Total energy = 1921.1082 kcal/mol (1921.0956 without restraints) Performing minimization step: 1999. Total energy = 1921.0017 kcal/mol (1920.9891 without restraints) Performing minimization step: 2000. Total energy = 1920.8952 kcal/mol (1920.8827 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e90c65df/tmp/ENST00000666628_refx/ENST00000666628_refx.pdb ...Done. Performing minimization step: 2001. Total energy = 1920.7888 kcal/mol (1920.7762 without restraints) Performing minimization step: 2002. Total energy = 1920.6824 kcal/mol (1920.6698 without restraints) Performing minimization step: 2003. Total energy = 1920.5760 kcal/mol (1920.5634 without restraints) Performing minimization step: 2004. Total energy = 1920.4697 kcal/mol (1920.4571 without restraints) Performing minimization step: 2005. Total energy = 1920.3634 kcal/mol (1920.3509 without restraints) Performing minimization step: 2006. Total energy = 1920.2572 kcal/mol (1920.2447 without restraints) Performing minimization step: 2007. Total energy = 1920.1511 kcal/mol (1920.1385 without restraints) Performing minimization step: 2008. Total energy = 1920.0448 kcal/mol (1920.0323 without restraints) Performing minimization step: 2009. Total energy = 1919.9385 kcal/mol (1919.9259 without restraints) Performing minimization step: 2010. Total energy = 1919.8327 kcal/mol (1919.8202 without restraints) Performing minimization step: 2011. Total energy = 1919.7266 kcal/mol (1919.7141 without restraints) Performing minimization step: 2012. Total energy = 1919.6206 kcal/mol (1919.6081 without restraints) Performing minimization step: 2013. Total energy = 1919.5146 kcal/mol (1919.5021 without restraints) Performing minimization step: 2014. Total energy = 1919.4087 kcal/mol (1919.3962 without restraints) Performing minimization step: 2015. Total energy = 1919.3028 kcal/mol (1919.2903 without restraints) Performing minimization step: 2016. Total energy = 1919.1971 kcal/mol (1919.1845 without restraints) Performing minimization step: 2017. Total energy = 1919.0911 kcal/mol (1919.0787 without restraints) Performing minimization step: 2018. Total energy = 1918.9854 kcal/mol (1918.9729 without restraints) Performing minimization step: 2019. Total energy = 1918.8795 kcal/mol (1918.8669 without restraints) Performing minimization step: 2020. Total energy = 1918.7736 kcal/mol (1918.7610 without restraints) Performing minimization step: 2021. Total energy = 1918.6679 kcal/mol (1918.6554 without restraints) Performing minimization step: 2022. Total energy = 1918.5624 kcal/mol (1918.5500 without restraints) Performing minimization step: 2023. Total energy = 1918.4571 kcal/mol (1918.4447 without restraints) Performing minimization step: 2024. Total energy = 1918.3516 kcal/mol (1918.3391 without restraints) Performing minimization step: 2025. Total energy = 1918.2462 kcal/mol (1918.2338 without restraints) Performing minimization step: 2026. Total energy = 1918.1408 kcal/mol (1918.1284 without restraints) Performing minimization step: 2027. Total energy = 1918.0353 kcal/mol (1918.0228 without restraints) Performing minimization step: 2028. Total energy = 1917.9298 kcal/mol (1917.9174 without restraints) Performing minimization step: 2029. Total energy = 1917.8245 kcal/mol (1917.8120 without restraints) Performing minimization step: 2030. Total energy = 1917.7191 kcal/mol (1917.7067 without restraints) Performing minimization step: 2031. Total energy = 1917.6137 kcal/mol (1917.6012 without restraints) Performing minimization step: 2032. Total energy = 1917.5082 kcal/mol (1917.4958 without restraints) Performing minimization step: 2033. Total energy = 1917.4031 kcal/mol (1917.3908 without restraints) Performing minimization step: 2034. Total energy = 1917.2981 kcal/mol (1917.2856 without restraints) Performing minimization step: 2035. Total energy = 1917.1929 kcal/mol (1917.1805 without restraints) Performing minimization step: 2036. Total energy = 1917.0879 kcal/mol (1917.0755 without restraints) Performing minimization step: 2037. Total energy = 1916.9827 kcal/mol (1916.9702 without restraints) Performing minimization step: 2038. Total energy = 1916.8778 kcal/mol (1916.8654 without restraints) Performing minimization step: 2039. Total energy = 1916.7726 kcal/mol (1916.7602 without restraints) Performing minimization step: 2040. Total energy = 1916.6677 kcal/mol (1916.6553 without restraints) Performing minimization step: 2041. Total energy = 1916.5624 kcal/mol (1916.5501 without restraints) Performing minimization step: 2042. Total energy = 1916.4574 kcal/mol (1916.4450 without restraints) Performing minimization step: 2043. Total energy = 1916.3526 kcal/mol (1916.3402 without restraints) Performing minimization step: 2044. Total energy = 1916.2478 kcal/mol (1916.2354 without restraints) Performing minimization step: 2045. Total energy = 1916.1431 kcal/mol (1916.1308 without restraints) Performing minimization step: 2046. Total energy = 1916.0384 kcal/mol (1916.0261 without restraints) Performing minimization step: 2047. Total energy = 1915.9335 kcal/mol (1915.9210 without restraints) Performing minimization step: 2048. Total energy = 1915.8288 kcal/mol (1915.8164 without restraints) Performing minimization step: 2049. Total energy = 1915.7242 kcal/mol (1915.7118 without restraints) Performing minimization step: 2050. Total energy = 1915.6196 kcal/mol (1915.6073 without restraints) Performing minimization step: 2051. Total energy = 1915.5151 kcal/mol (1915.5028 without restraints) Performing minimization step: 2052. Total energy = 1915.4106 kcal/mol (1915.3983 without restraints) Performing minimization step: 2053. Total energy = 1915.3061 kcal/mol (1915.2937 without restraints) Performing minimization step: 2054. Total energy = 1915.2016 kcal/mol (1915.1893 without restraints) Performing minimization step: 2055. Total energy = 1915.0972 kcal/mol (1915.0848 without restraints) Performing minimization step: 2056. Total energy = 1914.9928 kcal/mol (1914.9805 without restraints) Performing minimization step: 2057. Total energy = 1914.8883 kcal/mol (1914.8760 without restraints) Performing minimization step: 2058. Total energy = 1914.7839 kcal/mol (1914.7716 without restraints) Performing minimization step: 2059. Total energy = 1914.6797 kcal/mol (1914.6674 without restraints) Performing minimization step: 2060. Total energy = 1914.5755 kcal/mol (1914.5632 without restraints) Performing minimization step: 2061. Total energy = 1914.4710 kcal/mol (1914.4587 without restraints) Performing minimization step: 2062. Total energy = 1914.3668 kcal/mol (1914.3545 without restraints) Performing minimization step: 2063. Total energy = 1914.2625 kcal/mol (1914.2501 without restraints) Performing minimization step: 2064. Total energy = 1914.1581 kcal/mol (1914.1458 without restraints) Performing minimization step: 2065. Total energy = 1914.0540 kcal/mol (1914.0416 without restraints) Performing minimization step: 2066. Total energy = 1913.9500 kcal/mol (1913.9377 without restraints) Performing minimization step: 2067. Total energy = 1913.8464 kcal/mol (1913.8341 without restraints) Performing minimization step: 2068. Total energy = 1913.7422 kcal/mol (1913.7299 without restraints) Performing minimization step: 2069. Total energy = 1913.6383 kcal/mol (1913.6261 without restraints) Performing minimization step: 2070. Total energy = 1913.5343 kcal/mol (1913.5219 without restraints) Performing minimization step: 2071. Total energy = 1913.4303 kcal/mol (1913.4181 without restraints) Performing minimization step: 2072. Total energy = 1913.3266 kcal/mol (1913.3144 without restraints) Performing minimization step: 2073. Total energy = 1913.2230 kcal/mol (1913.2109 without restraints) Performing minimization step: 2074. Total energy = 1913.1194 kcal/mol (1913.1072 without restraints) Performing minimization step: 2075. Total energy = 1913.0160 kcal/mol (1913.0038 without restraints) Performing minimization step: 2076. Total energy = 1912.9121 kcal/mol (1912.8999 without restraints) Performing minimization step: 2077. Total energy = 1912.8086 kcal/mol (1912.7963 without restraints) Performing minimization step: 2078. Total energy = 1912.7046 kcal/mol (1912.6924 without restraints) Performing minimization step: 2079. Total energy = 1912.6014 kcal/mol (1912.5890 without restraints) Performing minimization step: 2080. Total energy = 1912.4976 kcal/mol (1912.4854 without restraints) Performing minimization step: 2081. Total energy = 1912.3943 kcal/mol (1912.3821 without restraints) Performing minimization step: 2082. Total energy = 1912.2909 kcal/mol (1912.2787 without restraints) Performing minimization step: 2083. Total energy = 1912.1876 kcal/mol (1912.1754 without restraints) Performing minimization step: 2084. Total energy = 1912.0843 kcal/mol (1912.0720 without restraints) Performing minimization step: 2085. Total energy = 1911.9810 kcal/mol (1911.9688 without restraints) Performing minimization step: 2086. Total energy = 1911.8778 kcal/mol (1911.8656 without restraints) Performing minimization step: 2087. Total energy = 1911.7747 kcal/mol (1911.7625 without restraints) Performing minimization step: 2088. Total energy = 1911.6716 kcal/mol (1911.6594 without restraints) Performing minimization step: 2089. Total energy = 1911.5685 kcal/mol (1911.5564 without restraints) Performing minimization step: 2090. Total energy = 1911.4655 kcal/mol (1911.4534 without restraints) Performing minimization step: 2091. Total energy = 1911.3626 kcal/mol (1911.3504 without restraints) Performing minimization step: 2092. Total energy = 1911.2598 kcal/mol (1911.2476 without restraints) Performing minimization step: 2093. Total energy = 1911.1568 kcal/mol (1911.1445 without restraints) Performing minimization step: 2094. Total energy = 1911.0536 kcal/mol (1911.0414 without restraints) Performing minimization step: 2095. Total energy = 1910.9507 kcal/mol (1910.9386 without restraints) Performing minimization step: 2096. Total energy = 1910.8478 kcal/mol (1910.8356 without restraints) Performing minimization step: 2097. Total energy = 1910.7452 kcal/mol (1910.7331 without restraints) Performing minimization step: 2098. Total energy = 1910.6425 kcal/mol (1910.6304 without restraints) Performing minimization step: 2099. Total energy = 1910.5398 kcal/mol (1910.5277 without restraints) Performing minimization step: 2100. Total energy = 1910.4372 kcal/mol (1910.4251 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e90c65df/tmp/ENST00000666628_refx/ENST00000666628_refx.pdb ...Done. Performing minimization step: 2101. Total energy = 1910.3344 kcal/mol (1910.3223 without restraints) Performing minimization step: 2102. Total energy = 1910.2318 kcal/mol (1910.2197 without restraints) Performing minimization step: 2103. Total energy = 1910.1294 kcal/mol (1910.1173 without restraints) Performing minimization step: 2104. Total energy = 1910.0271 kcal/mol (1910.0150 without restraints) Performing minimization step: 2105. Total energy = 1909.9246 kcal/mol (1909.9125 without restraints) Performing minimization step: 2106. Total energy = 1909.8222 kcal/mol (1909.8101 without restraints) Performing minimization step: 2107. Total energy = 1909.7196 kcal/mol (1909.7075 without restraints) Performing minimization step: 2108. Total energy = 1909.6169 kcal/mol (1909.6047 without restraints) Performing minimization step: 2109. Total energy = 1909.5144 kcal/mol (1909.5024 without restraints) Performing minimization step: 2110. Total energy = 1909.4122 kcal/mol (1909.4001 without restraints) Performing minimization step: 2111. Total energy = 1909.3099 kcal/mol (1909.2979 without restraints) Performing minimization step: 2112. Total energy = 1909.2078 kcal/mol (1909.1957 without restraints) Performing minimization step: 2113. Total energy = 1909.1056 kcal/mol (1909.0936 without restraints) Performing minimization step: 2114. Total energy = 1909.0033 kcal/mol (1908.9912 without restraints) Performing minimization step: 2115. Total energy = 1908.9010 kcal/mol (1908.8890 without restraints) Performing minimization step: 2116. Total energy = 1908.7990 kcal/mol (1908.7869 without restraints) Performing minimization step: 2117. Total energy = 1908.6970 kcal/mol (1908.6849 without restraints) Performing minimization step: 2118. Total energy = 1908.5950 kcal/mol (1908.5830 without restraints) Performing minimization step: 2119. Total energy = 1908.4931 kcal/mol (1908.4811 without restraints) Performing minimization step: 2120. Total energy = 1908.3912 kcal/mol (1908.3792 without restraints) Performing minimization step: 2121. Total energy = 1908.2896 kcal/mol (1908.2776 without restraints) Performing minimization step: 2122. Total energy = 1908.1874 kcal/mol (1908.1754 without restraints) Performing minimization step: 2123. Total energy = 1908.0856 kcal/mol (1908.0736 without restraints) Performing minimization step: 2124. Total energy = 1907.9838 kcal/mol (1907.9718 without restraints) Performing minimization step: 2125. Total energy = 1907.8823 kcal/mol (1907.8703 without restraints) Performing minimization step: 2126. Total energy = 1907.7807 kcal/mol (1907.7687 without restraints) Performing minimization step: 2127. Total energy = 1907.6790 kcal/mol (1907.6670 without restraints) Performing minimization step: 2128. Total energy = 1907.5774 kcal/mol (1907.5654 without restraints) Performing minimization step: 2129. Total energy = 1907.4758 kcal/mol (1907.4638 without restraints) Performing minimization step: 2130. Total energy = 1907.3743 kcal/mol (1907.3623 without restraints) Performing minimization step: 2131. Total energy = 1907.2728 kcal/mol (1907.2608 without restraints) Performing minimization step: 2132. Total energy = 1907.1714 kcal/mol (1907.1594 without restraints) Performing minimization step: 2133. Total energy = 1907.0699 kcal/mol (1907.0580 without restraints) Performing minimization step: 2134. Total energy = 1906.9686 kcal/mol (1906.9566 without restraints) Performing minimization step: 2135. Total energy = 1906.8674 kcal/mol (1906.8554 without restraints) Performing minimization step: 2136. Total energy = 1906.7659 kcal/mol (1906.7540 without restraints) Performing minimization step: 2137. Total energy = 1906.6644 kcal/mol (1906.6525 without restraints) Performing minimization step: 2138. Total energy = 1906.5630 kcal/mol (1906.5510 without restraints) Performing minimization step: 2139. Total energy = 1906.4618 kcal/mol (1906.4498 without restraints) Performing minimization step: 2140. Total energy = 1906.3606 kcal/mol (1906.3487 without restraints) Performing minimization step: 2141. Total energy = 1906.2595 kcal/mol (1906.2476 without restraints) Performing minimization step: 2142. Total energy = 1906.1581 kcal/mol (1906.1461 without restraints) Performing minimization step: 2143. Total energy = 1906.0569 kcal/mol (1906.0449 without restraints) Performing minimization step: 2144. Total energy = 1905.9559 kcal/mol (1905.9439 without restraints) Performing minimization step: 2145. Total energy = 1905.8546 kcal/mol (1905.8427 without restraints) Performing minimization step: 2146. Total energy = 1905.7537 kcal/mol (1905.7418 without restraints) Performing minimization step: 2147. Total energy = 1905.6528 kcal/mol (1905.6409 without restraints) Performing minimization step: 2148. Total energy = 1905.5522 kcal/mol (1905.5403 without restraints) Performing minimization step: 2149. Total energy = 1905.4511 kcal/mol (1905.4393 without restraints) Performing minimization step: 2150. Total energy = 1905.3504 kcal/mol (1905.3385 without restraints) Performing minimization step: 2151. Total energy = 1905.2499 kcal/mol (1905.2380 without restraints) Performing minimization step: 2152. Total energy = 1905.1488 kcal/mol (1905.1369 without restraints) Performing minimization step: 2153. Total energy = 1905.0480 kcal/mol (1905.0361 without restraints) Performing minimization step: 2154. Total energy = 1904.9472 kcal/mol (1904.9353 without restraints) Performing minimization step: 2155. Total energy = 1904.8463 kcal/mol (1904.8343 without restraints) Performing minimization step: 2156. Total energy = 1904.7454 kcal/mol (1904.7336 without restraints) Performing minimization step: 2157. Total energy = 1904.6450 kcal/mol (1904.6331 without restraints) Performing minimization step: 2158. Total energy = 1904.5445 kcal/mol (1904.5327 without restraints) Performing minimization step: 2159. Total energy = 1904.4441 kcal/mol (1904.4322 without restraints) Performing minimization step: 2160. Total energy = 1904.3435 kcal/mol (1904.3316 without restraints) Performing minimization step: 2161. Total energy = 1904.2431 kcal/mol (1904.2313 without restraints) Performing minimization step: 2162. Total energy = 1904.1428 kcal/mol (1904.1309 without restraints) Performing minimization step: 2163. Total energy = 1904.0425 kcal/mol (1904.0307 without restraints) Performing minimization step: 2164. Total energy = 1903.9423 kcal/mol (1903.9304 without restraints) Performing minimization step: 2165. Total energy = 1903.8420 kcal/mol (1903.8302 without restraints) Performing minimization step: 2166. Total energy = 1903.7420 kcal/mol (1903.7302 without restraints) Performing minimization step: 2167. Total energy = 1903.6419 kcal/mol (1903.6301 without restraints) Performing minimization step: 2168. Total energy = 1903.5416 kcal/mol (1903.5298 without restraints) Performing minimization step: 2169. Total energy = 1903.4415 kcal/mol (1903.4297 without restraints) Performing minimization step: 2170. Total energy = 1903.3413 kcal/mol (1903.3295 without restraints) Performing minimization step: 2171. Total energy = 1903.2415 kcal/mol (1903.2297 without restraints) Performing minimization step: 2172. Total energy = 1903.1414 kcal/mol (1903.1296 without restraints) Performing minimization step: 2173. Total energy = 1903.0412 kcal/mol (1903.0294 without restraints) Performing minimization step: 2174. Total energy = 1902.9411 kcal/mol (1902.9294 without restraints) Performing minimization step: 2175. Total energy = 1902.8413 kcal/mol (1902.8295 without restraints) Performing minimization step: 2176. Total energy = 1902.7415 kcal/mol (1902.7297 without restraints) Performing minimization step: 2177. Total energy = 1902.6413 kcal/mol (1902.6294 without restraints) Performing minimization step: 2178. Total energy = 1902.5415 kcal/mol (1902.5297 without restraints) Performing minimization step: 2179. Total energy = 1902.4418 kcal/mol (1902.4300 without restraints) Performing minimization step: 2180. Total energy = 1902.3422 kcal/mol (1902.3304 without restraints) Performing minimization step: 2181. Total energy = 1902.2425 kcal/mol (1902.2308 without restraints) Performing minimization step: 2182. Total energy = 1902.1428 kcal/mol (1902.1310 without restraints) Performing minimization step: 2183. Total energy = 1902.0433 kcal/mol (1902.0317 without restraints) Performing minimization step: 2184. Total energy = 1901.9439 kcal/mol (1901.9322 without restraints) Performing minimization step: 2185. Total energy = 1901.8443 kcal/mol (1901.8325 without restraints) Performing minimization step: 2186. Total energy = 1901.7448 kcal/mol (1901.7330 without restraints) Performing minimization step: 2187. Total energy = 1901.6450 kcal/mol (1901.6333 without restraints) Performing minimization step: 2188. Total energy = 1901.5456 kcal/mol (1901.5339 without restraints) Performing minimization step: 2189. Total energy = 1901.4465 kcal/mol (1901.4348 without restraints) Performing minimization step: 2190. Total energy = 1901.3473 kcal/mol (1901.3355 without restraints) Performing minimization step: 2191. Total energy = 1901.2478 kcal/mol (1901.2361 without restraints) Performing minimization step: 2192. Total energy = 1901.1486 kcal/mol (1901.1369 without restraints) Performing minimization step: 2193. Total energy = 1901.0494 kcal/mol (1901.0377 without restraints) Performing minimization step: 2194. Total energy = 1900.9503 kcal/mol (1900.9386 without restraints) Performing minimization step: 2195. Total energy = 1900.8512 kcal/mol (1900.8395 without restraints) Performing minimization step: 2196. Total energy = 1900.7518 kcal/mol (1900.7401 without restraints) Performing minimization step: 2197. Total energy = 1900.6525 kcal/mol (1900.6409 without restraints) Performing minimization step: 2198. Total energy = 1900.5533 kcal/mol (1900.5416 without restraints) Performing minimization step: 2199. Total energy = 1900.4543 kcal/mol (1900.4427 without restraints) Performing minimization step: 2200. Total energy = 1900.3555 kcal/mol (1900.3440 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e90c65df/tmp/ENST00000666628_refx/ENST00000666628_refx.pdb ...Done. Performing minimization step: 2201. Total energy = 1900.2567 kcal/mol (1900.2451 without restraints) Performing minimization step: 2202. Total energy = 1900.1577 kcal/mol (1900.1460 without restraints) Performing minimization step: 2203. Total energy = 1900.0591 kcal/mol (1900.0474 without restraints) Performing minimization step: 2204. Total energy = 1899.9603 kcal/mol (1899.9486 without restraints) Performing minimization step: 2205. Total energy = 1899.8616 kcal/mol (1899.8499 without restraints) Performing minimization step: 2206. Total energy = 1899.7627 kcal/mol (1899.7511 without restraints) Performing minimization step: 2207. Total energy = 1899.6641 kcal/mol (1899.6524 without restraints) Performing minimization step: 2208. Total energy = 1899.5655 kcal/mol (1899.5538 without restraints) Performing minimization step: 2209. Total energy = 1899.4671 kcal/mol (1899.4555 without restraints) Performing minimization step: 2210. Total energy = 1899.3686 kcal/mol (1899.3569 without restraints) Performing minimization step: 2211. Total energy = 1899.2699 kcal/mol (1899.2582 without restraints) Performing minimization step: 2212. Total energy = 1899.1713 kcal/mol (1899.1597 without restraints) Performing minimization step: 2213. Total energy = 1899.0725 kcal/mol (1899.0609 without restraints) Performing minimization step: 2214. Total energy = 1898.9742 kcal/mol (1898.9626 without restraints) Performing minimization step: 2215. Total energy = 1898.8757 kcal/mol (1898.8640 without restraints) Performing minimization step: 2216. Total energy = 1898.7773 kcal/mol (1898.7657 without restraints) Performing minimization step: 2217. Total energy = 1898.6788 kcal/mol (1898.6672 without restraints) Performing minimization step: 2218. Total energy = 1898.5806 kcal/mol (1898.5690 without restraints) Performing minimization step: 2219. Total energy = 1898.4824 kcal/mol (1898.4708 without restraints) Performing minimization step: 2220. Total energy = 1898.3842 kcal/mol (1898.3726 without restraints) Performing minimization step: 2221. Total energy = 1898.2861 kcal/mol (1898.2745 without restraints) Performing minimization step: 2222. Total energy = 1898.1881 kcal/mol (1898.1766 without restraints) Performing minimization step: 2223. Total energy = 1898.0897 kcal/mol (1898.0778 without restraints) Performing minimization step: 2224. Total energy = 1897.9914 kcal/mol (1897.9798 without restraints) Performing minimization step: 2225. Total energy = 1897.8934 kcal/mol (1897.8818 without restraints) Performing minimization step: 2226. Total energy = 1897.7953 kcal/mol (1897.7838 without restraints) Performing minimization step: 2227. Total energy = 1897.6974 kcal/mol (1897.6859 without restraints) Performing minimization step: 2228. Total energy = 1897.5995 kcal/mol (1897.5880 without restraints) Performing minimization step: 2229. Total energy = 1897.5017 kcal/mol (1897.4901 without restraints) Performing minimization step: 2230. Total energy = 1897.4035 kcal/mol (1897.3917 without restraints) Performing minimization step: 2231. Total energy = 1897.3053 kcal/mol (1897.2937 without restraints) Performing minimization step: 2232. Total energy = 1897.2075 kcal/mol (1897.1959 without restraints) Performing minimization step: 2233. Total energy = 1897.1098 kcal/mol (1897.0982 without restraints) Performing minimization step: 2234. Total energy = 1897.0121 kcal/mol (1897.0006 without restraints) Performing minimization step: 2235. Total energy = 1896.9145 kcal/mol (1896.9030 without restraints) Performing minimization step: 2236. Total energy = 1896.8169 kcal/mol (1896.8054 without restraints) Performing minimization step: 2237. Total energy = 1896.7194 kcal/mol (1896.7079 without restraints) Performing minimization step: 2238. Total energy = 1896.6219 kcal/mol (1896.6104 without restraints) Performing minimization step: 2239. Total energy = 1896.5244 kcal/mol (1896.5129 without restraints) Performing minimization step: 2240. Total energy = 1896.4273 kcal/mol (1896.4157 without restraints) Performing minimization step: 2241. Total energy = 1896.3296 kcal/mol (1896.3181 without restraints) Performing minimization step: 2242. Total energy = 1896.2321 kcal/mol (1896.2206 without restraints) Performing minimization step: 2243. Total energy = 1896.1347 kcal/mol (1896.1232 without restraints) Performing minimization step: 2244. Total energy = 1896.0374 kcal/mol (1896.0259 without restraints) Performing minimization step: 2245. Total energy = 1895.9399 kcal/mol (1895.9285 without restraints) Performing minimization step: 2246. Total energy = 1895.8427 kcal/mol (1895.8312 without restraints) Performing minimization step: 2247. Total energy = 1895.7454 kcal/mol (1895.7339 without restraints) Performing minimization step: 2248. Total energy = 1895.6482 kcal/mol (1895.6367 without restraints) Performing minimization step: 2249. Total energy = 1895.5508 kcal/mol (1895.5394 without restraints) Performing minimization step: 2250. Total energy = 1895.4535 kcal/mol (1895.4421 without restraints) Performing minimization step: 2251. Total energy = 1895.3563 kcal/mol (1895.3448 without restraints) Performing minimization step: 2252. Total energy = 1895.2593 kcal/mol (1895.2478 without restraints) Performing minimization step: 2253. Total energy = 1895.1623 kcal/mol (1895.1509 without restraints) Performing minimization step: 2254. Total energy = 1895.0654 kcal/mol (1895.0539 without restraints) Performing minimization step: 2255. Total energy = 1894.9684 kcal/mol (1894.9570 without restraints) Performing minimization step: 2256. Total energy = 1894.8717 kcal/mol (1894.8602 without restraints) Performing minimization step: 2257. Total energy = 1894.7748 kcal/mol (1894.7633 without restraints) Performing minimization step: 2258. Total energy = 1894.6780 kcal/mol (1894.6666 without restraints) Performing minimization step: 2259. Total energy = 1894.5814 kcal/mol (1894.5700 without restraints) Performing minimization step: 2260. Total energy = 1894.4840 kcal/mol (1894.4726 without restraints) Performing minimization step: 2261. Total energy = 1894.3873 kcal/mol (1894.3759 without restraints) Performing minimization step: 2262. Total energy = 1894.2909 kcal/mol (1894.2795 without restraints) Performing minimization step: 2263. Total energy = 1894.1943 kcal/mol (1894.1829 without restraints) Performing minimization step: 2264. Total energy = 1894.0977 kcal/mol (1894.0863 without restraints) Performing minimization step: 2265. Total energy = 1894.0015 kcal/mol (1893.9901 without restraints) Performing minimization step: 2266. Total energy = 1893.9050 kcal/mol (1893.8936 without restraints) Performing minimization step: 2267. Total energy = 1893.8085 kcal/mol (1893.7972 without restraints) Performing minimization step: 2268. Total energy = 1893.7121 kcal/mol (1893.7007 without restraints) Performing minimization step: 2269. Total energy = 1893.6157 kcal/mol (1893.6043 without restraints) Performing minimization step: 2270. Total energy = 1893.5194 kcal/mol (1893.5080 without restraints) Performing minimization step: 2271. Total energy = 1893.4231 kcal/mol (1893.4117 without restraints) Performing minimization step: 2272. Total energy = 1893.3271 kcal/mol (1893.3157 without restraints) Performing minimization step: 2273. Total energy = 1893.2308 kcal/mol (1893.2195 without restraints) Performing minimization step: 2274. Total energy = 1893.1348 kcal/mol (1893.1235 without restraints) Performing minimization step: 2275. Total energy = 1893.0386 kcal/mol (1893.0273 without restraints) Performing minimization step: 2276. Total energy = 1892.9425 kcal/mol (1892.9312 without restraints) Performing minimization step: 2277. Total energy = 1892.8464 kcal/mol (1892.8351 without restraints) Performing minimization step: 2278. Total energy = 1892.7504 kcal/mol (1892.7391 without restraints) Performing minimization step: 2279. Total energy = 1892.6541 kcal/mol (1892.6426 without restraints) Performing minimization step: 2280. Total energy = 1892.5580 kcal/mol (1892.5467 without restraints) Performing minimization step: 2281. Total energy = 1892.4621 kcal/mol (1892.4508 without restraints) Performing minimization step: 2282. Total energy = 1892.3662 kcal/mol (1892.3549 without restraints) Performing minimization step: 2283. Total energy = 1892.2702 kcal/mol (1892.2588 without restraints) Performing minimization step: 2284. Total energy = 1892.1742 kcal/mol (1892.1629 without restraints) Performing minimization step: 2285. Total energy = 1892.0785 kcal/mol (1892.0673 without restraints) Performing minimization step: 2286. Total energy = 1891.9829 kcal/mol (1891.9716 without restraints) Performing minimization step: 2287. Total energy = 1891.8876 kcal/mol (1891.8763 without restraints) Performing minimization step: 2288. Total energy = 1891.7919 kcal/mol (1891.7806 without restraints) Performing minimization step: 2289. Total energy = 1891.6964 kcal/mol (1891.6851 without restraints) Performing minimization step: 2290. Total energy = 1891.6011 kcal/mol (1891.5898 without restraints) Performing minimization step: 2291. Total energy = 1891.5055 kcal/mol (1891.4942 without restraints) Performing minimization step: 2292. Total energy = 1891.4100 kcal/mol (1891.3987 without restraints) Performing minimization step: 2293. Total energy = 1891.3143 kcal/mol (1891.3030 without restraints) Performing minimization step: 2294. Total energy = 1891.2186 kcal/mol (1891.2074 without restraints) Performing minimization step: 2295. Total energy = 1891.1233 kcal/mol (1891.1120 without restraints) Performing minimization step: 2296. Total energy = 1891.0279 kcal/mol (1891.0166 without restraints) Performing minimization step: 2297. Total energy = 1890.9324 kcal/mol (1890.9212 without restraints) Performing minimization step: 2298. Total energy = 1890.8371 kcal/mol (1890.8259 without restraints) Performing minimization step: 2299. Total energy = 1890.7418 kcal/mol (1890.7306 without restraints) Performing minimization step: 2300. Total energy = 1890.6464 kcal/mol (1890.6351 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e90c65df/tmp/ENST00000666628_refx/ENST00000666628_refx.pdb ...Done. Performing minimization step: 2301. Total energy = 1890.5512 kcal/mol (1890.5399 without restraints) Performing minimization step: 2302. Total energy = 1890.4562 kcal/mol (1890.4449 without restraints) Performing minimization step: 2303. Total energy = 1890.3610 kcal/mol (1890.3497 without restraints) Performing minimization step: 2304. Total energy = 1890.2659 kcal/mol (1890.2546 without restraints) Performing minimization step: 2305. Total energy = 1890.1708 kcal/mol (1890.1596 without restraints) Performing minimization step: 2306. Total energy = 1890.0757 kcal/mol (1890.0645 without restraints) Performing minimization step: 2307. Total energy = 1889.9808 kcal/mol (1889.9697 without restraints) Performing minimization step: 2308. Total energy = 1889.8861 kcal/mol (1889.8749 without restraints) Performing minimization step: 2309. Total energy = 1889.7912 kcal/mol (1889.7800 without restraints) Performing minimization step: 2310. Total energy = 1889.6963 kcal/mol (1889.6851 without restraints) Performing minimization step: 2311. Total energy = 1889.6015 kcal/mol (1889.5903 without restraints) Performing minimization step: 2312. Total energy = 1889.5066 kcal/mol (1889.4955 without restraints) Performing minimization step: 2313. Total energy = 1889.4119 kcal/mol (1889.4007 without restraints) Performing minimization step: 2314. Total energy = 1889.3175 kcal/mol (1889.3064 without restraints) Performing minimization step: 2315. Total energy = 1889.2228 kcal/mol (1889.2117 without restraints) Performing minimization step: 2316. Total energy = 1889.1281 kcal/mol (1889.1170 without restraints) Performing minimization step: 2317. Total energy = 1889.0335 kcal/mol (1889.0223 without restraints) Performing minimization step: 2318. Total energy = 1888.9389 kcal/mol (1888.9278 without restraints) Performing minimization step: 2319. Total energy = 1888.8441 kcal/mol (1888.8330 without restraints) Performing minimization step: 2320. Total energy = 1888.7496 kcal/mol (1888.7384 without restraints) Performing minimization step: 2321. Total energy = 1888.6550 kcal/mol (1888.6438 without restraints) Performing minimization step: 2322. Total energy = 1888.5605 kcal/mol (1888.5494 without restraints) Performing minimization step: 2323. Total energy = 1888.4662 kcal/mol (1888.4551 without restraints) Performing minimization step: 2324. Total energy = 1888.3719 kcal/mol (1888.3607 without restraints) Performing minimization step: 2325. Total energy = 1888.2775 kcal/mol (1888.2664 without restraints) Performing minimization step: 2326. Total energy = 1888.1832 kcal/mol (1888.1721 without restraints) Performing minimization step: 2327. Total energy = 1888.0890 kcal/mol (1888.0778 without restraints) Performing minimization step: 2328. Total energy = 1887.9944 kcal/mol (1887.9832 without restraints) Performing minimization step: 2329. Total energy = 1887.9001 kcal/mol (1887.8889 without restraints) Performing minimization step: 2330. Total energy = 1887.8061 kcal/mol (1887.7950 without restraints) Performing minimization step: 2331. Total energy = 1887.7119 kcal/mol (1887.7008 without restraints) Performing minimization step: 2332. Total energy = 1887.6179 kcal/mol (1887.6067 without restraints) Performing minimization step: 2333. Total energy = 1887.5238 kcal/mol (1887.5127 without restraints) Performing minimization step: 2334. Total energy = 1887.4298 kcal/mol (1887.4187 without restraints) Performing minimization step: 2335. Total energy = 1887.3358 kcal/mol (1887.3247 without restraints) Performing minimization step: 2336. Total energy = 1887.2420 kcal/mol (1887.2310 without restraints) Performing minimization step: 2337. Total energy = 1887.1482 kcal/mol (1887.1371 without restraints) Performing minimization step: 2338. Total energy = 1887.0543 kcal/mol (1887.0432 without restraints) Performing minimization step: 2339. Total energy = 1886.9605 kcal/mol (1886.9494 without restraints) Performing minimization step: 2340. Total energy = 1886.8667 kcal/mol (1886.8556 without restraints) Performing minimization step: 2341. Total energy = 1886.7729 kcal/mol (1886.7618 without restraints) Performing minimization step: 2342. Total energy = 1886.6790 kcal/mol (1886.6679 without restraints) Performing minimization step: 2343. Total energy = 1886.5853 kcal/mol (1886.5742 without restraints) Performing minimization step: 2344. Total energy = 1886.4917 kcal/mol (1886.4806 without restraints) Performing minimization step: 2345. Total energy = 1886.3980 kcal/mol (1886.3869 without restraints) Performing minimization step: 2346. Total energy = 1886.3042 kcal/mol (1886.2932 without restraints) Performing minimization step: 2347. Total energy = 1886.2107 kcal/mol (1886.1996 without restraints) Performing minimization step: 2348. Total energy = 1886.1170 kcal/mol (1886.1059 without restraints) Performing minimization step: 2349. Total energy = 1886.0235 kcal/mol (1886.0124 without restraints) Performing minimization step: 2350. Total energy = 1885.9301 kcal/mol (1885.9192 without restraints) Performing minimization step: 2351. Total energy = 1885.8368 kcal/mol (1885.8258 without restraints) Performing minimization step: 2352. Total energy = 1885.7434 kcal/mol (1885.7324 without restraints) Performing minimization step: 2353. Total energy = 1885.6503 kcal/mol (1885.6392 without restraints) Performing minimization step: 2354. Total energy = 1885.5572 kcal/mol (1885.5462 without restraints) Performing minimization step: 2355. Total energy = 1885.4639 kcal/mol (1885.4529 without restraints) Performing minimization step: 2356. Total energy = 1885.3707 kcal/mol (1885.3597 without restraints) Performing minimization step: 2357. Total energy = 1885.2775 kcal/mol (1885.2665 without restraints) Performing minimization step: 2358. Total energy = 1885.1844 kcal/mol (1885.1734 without restraints) Performing minimization step: 2359. Total energy = 1885.0912 kcal/mol (1885.0803 without restraints) Performing minimization step: 2360. Total energy = 1884.9981 kcal/mol (1884.9872 without restraints) Performing minimization step: 2361. Total energy = 1884.9052 kcal/mol (1884.8942 without restraints) Performing minimization step: 2362. Total energy = 1884.8124 kcal/mol (1884.8014 without restraints) Performing minimization step: 2363. Total energy = 1884.7195 kcal/mol (1884.7086 without restraints) Performing minimization step: 2364. Total energy = 1884.6266 kcal/mol (1884.6156 without restraints) Performing minimization step: 2365. Total energy = 1884.5337 kcal/mol (1884.5227 without restraints) Performing minimization step: 2366. Total energy = 1884.4408 kcal/mol (1884.4298 without restraints) Performing minimization step: 2367. Total energy = 1884.3477 kcal/mol (1884.3368 without restraints) Performing minimization step: 2368. Total energy = 1884.2549 kcal/mol (1884.2440 without restraints) Performing minimization step: 2369. Total energy = 1884.1622 kcal/mol (1884.1512 without restraints) Performing minimization step: 2370. Total energy = 1884.0694 kcal/mol (1884.0585 without restraints) Performing minimization step: 2371. Total energy = 1883.9765 kcal/mol (1883.9656 without restraints) Performing minimization step: 2372. Total energy = 1883.8838 kcal/mol (1883.8729 without restraints) Performing minimization step: 2373. Total energy = 1883.7910 kcal/mol (1883.7801 without restraints) Performing minimization step: 2374. Total energy = 1883.6984 kcal/mol (1883.6875 without restraints) Performing minimization step: 2375. Total energy = 1883.6059 kcal/mol (1883.5949 without restraints) Performing minimization step: 2376. Total energy = 1883.5133 kcal/mol (1883.5024 without restraints) Performing minimization step: 2377. Total energy = 1883.4208 kcal/mol (1883.4099 without restraints) Performing minimization step: 2378. Total energy = 1883.3284 kcal/mol (1883.3176 without restraints) Performing minimization step: 2379. Total energy = 1883.2361 kcal/mol (1883.2252 without restraints) Performing minimization step: 2380. Total energy = 1883.1437 kcal/mol (1883.1328 without restraints) Performing minimization step: 2381. Total energy = 1883.0513 kcal/mol (1883.0404 without restraints) Performing minimization step: 2382. Total energy = 1882.9588 kcal/mol (1882.9479 without restraints) Performing minimization step: 2383. Total energy = 1882.8665 kcal/mol (1882.8556 without restraints) Performing minimization step: 2384. Total energy = 1882.7747 kcal/mol (1882.7638 without restraints) Performing minimization step: 2385. Total energy = 1882.6826 kcal/mol (1882.6718 without restraints) Performing minimization step: 2386. Total energy = 1882.5905 kcal/mol (1882.5796 without restraints) Performing minimization step: 2387. Total energy = 1882.4984 kcal/mol (1882.4877 without restraints) Performing minimization step: 2388. Total energy = 1882.4065 kcal/mol (1882.3956 without restraints) Performing minimization step: 2389. Total energy = 1882.3145 kcal/mol (1882.3036 without restraints) Performing minimization step: 2390. Total energy = 1882.2224 kcal/mol (1882.2116 without restraints) Performing minimization step: 2391. Total energy = 1882.1300 kcal/mol (1882.1192 without restraints) Performing minimization step: 2392. Total energy = 1882.0381 kcal/mol (1882.0272 without restraints) Performing minimization step: 2393. Total energy = 1881.9461 kcal/mol (1881.9351 without restraints) Performing minimization step: 2394. Total energy = 1881.8541 kcal/mol (1881.8432 without restraints) Performing minimization step: 2395. Total energy = 1881.7622 kcal/mol (1881.7514 without restraints) Performing minimization step: 2396. Total energy = 1881.6704 kcal/mol (1881.6596 without restraints) Performing minimization step: 2397. Total energy = 1881.5786 kcal/mol (1881.5678 without restraints) Performing minimization step: 2398. Total energy = 1881.4869 kcal/mol (1881.4761 without restraints) Performing minimization step: 2399. Total energy = 1881.3952 kcal/mol (1881.3844 without restraints) Performing minimization step: 2400. Total energy = 1881.3033 kcal/mol (1881.2925 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e90c65df/tmp/ENST00000666628_refx/ENST00000666628_refx.pdb ...Done. Performing minimization step: 2401. Total energy = 1881.2116 kcal/mol (1881.2008 without restraints) Performing minimization step: 2402. Total energy = 1881.1201 kcal/mol (1881.1093 without restraints) Performing minimization step: 2403. Total energy = 1881.0285 kcal/mol (1881.0177 without restraints) Performing minimization step: 2404. Total energy = 1880.9370 kcal/mol (1880.9262 without restraints) Performing minimization step: 2405. Total energy = 1880.8456 kcal/mol (1880.8351 without restraints) Performing minimization step: 2406. Total energy = 1880.7539 kcal/mol (1880.7431 without restraints) Performing minimization step: 2407. Total energy = 1880.6626 kcal/mol (1880.6518 without restraints) Performing minimization step: 2408. Total energy = 1880.5709 kcal/mol (1880.5601 without restraints) Performing minimization step: 2409. Total energy = 1880.4796 kcal/mol (1880.4688 without restraints) Performing minimization step: 2410. Total energy = 1880.3883 kcal/mol (1880.3775 without restraints) Performing minimization step: 2411. Total energy = 1880.2970 kcal/mol (1880.2862 without restraints) Performing minimization step: 2412. Total energy = 1880.2057 kcal/mol (1880.1949 without restraints) Performing minimization step: 2413. Total energy = 1880.1145 kcal/mol (1880.1037 without restraints) Performing minimization step: 2414. Total energy = 1880.0233 kcal/mol (1880.0125 without restraints) Performing minimization step: 2415. Total energy = 1879.9321 kcal/mol (1879.9213 without restraints) Performing minimization step: 2416. Total energy = 1879.8410 kcal/mol (1879.8302 without restraints) Performing minimization step: 2417. Total energy = 1879.7499 kcal/mol (1879.7391 without restraints) Performing minimization step: 2418. Total energy = 1879.6585 kcal/mol (1879.6477 without restraints) Performing minimization step: 2419. Total energy = 1879.5676 kcal/mol (1879.5569 without restraints) Performing minimization step: 2420. Total energy = 1879.4767 kcal/mol (1879.4659 without restraints) Performing minimization step: 2421. Total energy = 1879.3855 kcal/mol (1879.3748 without restraints) Performing minimization step: 2422. Total energy = 1879.2946 kcal/mol (1879.2839 without restraints) Performing minimization step: 2423. Total energy = 1879.2037 kcal/mol (1879.1930 without restraints) Performing minimization step: 2424. Total energy = 1879.1127 kcal/mol (1879.1019 without restraints) Performing minimization step: 2425. Total energy = 1879.0219 kcal/mol (1879.0111 without restraints) Performing minimization step: 2426. Total energy = 1878.9309 kcal/mol (1878.9202 without restraints) Performing minimization step: 2427. Total energy = 1878.8402 kcal/mol (1878.8295 without restraints) Performing minimization step: 2428. Total energy = 1878.7493 kcal/mol (1878.7386 without restraints) Performing minimization step: 2429. Total energy = 1878.6587 kcal/mol (1878.6480 without restraints) Performing minimization step: 2430. Total energy = 1878.5680 kcal/mol (1878.5573 without restraints) Performing minimization step: 2431. Total energy = 1878.4774 kcal/mol (1878.4667 without restraints) Performing minimization step: 2432. Total energy = 1878.3869 kcal/mol (1878.3762 without restraints) Performing minimization step: 2433. Total energy = 1878.2966 kcal/mol (1878.2859 without restraints) Performing minimization step: 2434. Total energy = 1878.2060 kcal/mol (1878.1954 without restraints) Performing minimization step: 2435. Total energy = 1878.1156 kcal/mol (1878.1049 without restraints) Performing minimization step: 2436. Total energy = 1878.0250 kcal/mol (1878.0144 without restraints) Performing minimization step: 2437. Total energy = 1877.9347 kcal/mol (1877.9241 without restraints) Performing minimization step: 2438. Total energy = 1877.8444 kcal/mol (1877.8337 without restraints) Performing minimization step: 2439. Total energy = 1877.7541 kcal/mol (1877.7434 without restraints) Performing minimization step: 2440. Total energy = 1877.6638 kcal/mol (1877.6531 without restraints) Performing minimization step: 2441. Total energy = 1877.5736 kcal/mol (1877.5629 without restraints) Performing minimization step: 2442. Total energy = 1877.4833 kcal/mol (1877.4727 without restraints) Performing minimization step: 2443. Total energy = 1877.3933 kcal/mol (1877.3827 without restraints) Performing minimization step: 2444. Total energy = 1877.3032 kcal/mol (1877.2925 without restraints) Performing minimization step: 2445. Total energy = 1877.2130 kcal/mol (1877.2024 without restraints) Performing minimization step: 2446. Total energy = 1877.1228 kcal/mol (1877.1121 without restraints) Performing minimization step: 2447. Total energy = 1877.0328 kcal/mol (1877.0223 without restraints) Performing minimization step: 2448. Total energy = 1876.9428 kcal/mol (1876.9322 without restraints) Performing minimization step: 2449. Total energy = 1876.8528 kcal/mol (1876.8422 without restraints) Performing minimization step: 2450. Total energy = 1876.7629 kcal/mol (1876.7523 without restraints) Performing minimization step: 2451. Total energy = 1876.6727 kcal/mol (1876.6621 without restraints) Performing minimization step: 2452. Total energy = 1876.5829 kcal/mol (1876.5723 without restraints) Performing minimization step: 2453. Total energy = 1876.4930 kcal/mol (1876.4824 without restraints) Performing minimization step: 2454. Total energy = 1876.4032 kcal/mol (1876.3926 without restraints) Performing minimization step: 2455. Total energy = 1876.3134 kcal/mol (1876.3029 without restraints) Performing minimization step: 2456. Total energy = 1876.2239 kcal/mol (1876.2133 without restraints) Performing minimization step: 2457. Total energy = 1876.1341 kcal/mol (1876.1234 without restraints) Performing minimization step: 2458. Total energy = 1876.0443 kcal/mol (1876.0337 without restraints) Performing minimization step: 2459. Total energy = 1875.9547 kcal/mol (1875.9441 without restraints) Performing minimization step: 2460. Total energy = 1875.8655 kcal/mol (1875.8549 without restraints) Performing minimization step: 2461. Total energy = 1875.7761 kcal/mol (1875.7656 without restraints) Performing minimization step: 2462. Total energy = 1875.6866 kcal/mol (1875.6761 without restraints) Performing minimization step: 2463. Total energy = 1875.5970 kcal/mol (1875.5864 without restraints) Performing minimization step: 2464. Total energy = 1875.5075 kcal/mol (1875.4970 without restraints) Performing minimization step: 2465. Total energy = 1875.4181 kcal/mol (1875.4076 without restraints) Performing minimization step: 2466. Total energy = 1875.3287 kcal/mol (1875.3181 without restraints) Performing minimization step: 2467. Total energy = 1875.2391 kcal/mol (1875.2285 without restraints) Performing minimization step: 2468. Total energy = 1875.1500 kcal/mol (1875.1395 without restraints) Performing minimization step: 2469. Total energy = 1875.0603 kcal/mol (1875.0498 without restraints) Performing minimization step: 2470. Total energy = 1874.9712 kcal/mol (1874.9607 without restraints) Performing minimization step: 2471. Total energy = 1874.8818 kcal/mol (1874.8713 without restraints) Performing minimization step: 2472. Total energy = 1874.7926 kcal/mol (1874.7821 without restraints) Performing minimization step: 2473. Total energy = 1874.7032 kcal/mol (1874.6927 without restraints) Performing minimization step: 2474. Total energy = 1874.6139 kcal/mol (1874.6034 without restraints) Performing minimization step: 2475. Total energy = 1874.5249 kcal/mol (1874.5144 without restraints) Performing minimization step: 2476. Total energy = 1874.4354 kcal/mol (1874.4249 without restraints) Performing minimization step: 2477. Total energy = 1874.3464 kcal/mol (1874.3359 without restraints) Performing minimization step: 2478. Total energy = 1874.2574 kcal/mol (1874.2469 without restraints) Performing minimization step: 2479. Total energy = 1874.1684 kcal/mol (1874.1579 without restraints) Performing minimization step: 2480. Total energy = 1874.0795 kcal/mol (1874.0690 without restraints) Performing minimization step: 2481. Total energy = 1873.9906 kcal/mol (1873.9802 without restraints) Performing minimization step: 2482. Total energy = 1873.9020 kcal/mol (1873.8915 without restraints) Performing minimization step: 2483. Total energy = 1873.8131 kcal/mol (1873.8027 without restraints) Performing minimization step: 2484. Total energy = 1873.7244 kcal/mol (1873.7139 without restraints) Performing minimization step: 2485. Total energy = 1873.6356 kcal/mol (1873.6251 without restraints) Performing minimization step: 2486. Total energy = 1873.5469 kcal/mol (1873.5364 without restraints) Performing minimization step: 2487. Total energy = 1873.4582 kcal/mol (1873.4478 without restraints) Performing minimization step: 2488. Total energy = 1873.3696 kcal/mol (1873.3591 without restraints) Performing minimization step: 2489. Total energy = 1873.2810 kcal/mol (1873.2705 without restraints) Performing minimization step: 2490. Total energy = 1873.1924 kcal/mol (1873.1819 without restraints) Performing minimization step: 2491. Total energy = 1873.1038 kcal/mol (1873.0933 without restraints) Performing minimization step: 2492. Total energy = 1873.0153 kcal/mol (1873.0048 without restraints) Performing minimization step: 2493. Total energy = 1872.9268 kcal/mol (1872.9163 without restraints) Performing minimization step: 2494. Total energy = 1872.8381 kcal/mol (1872.8277 without restraints) Performing minimization step: 2495. Total energy = 1872.7497 kcal/mol (1872.7392 without restraints) Performing minimization step: 2496. Total energy = 1872.6613 kcal/mol (1872.6509 without restraints) Performing minimization step: 2497. Total energy = 1872.5730 kcal/mol (1872.5625 without restraints) Performing minimization step: 2498. Total energy = 1872.4841 kcal/mol (1872.4736 without restraints) Performing minimization step: 2499. Total energy = 1872.3957 kcal/mol (1872.3853 without restraints) Performing minimization step: 2500. Total energy = 1872.3075 kcal/mol (1872.2970 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e90c65df/tmp/ENST00000666628_refx/ENST00000666628_refx.pdb ...Done. Performing minimization step: 2501. Total energy = 1872.2192 kcal/mol (1872.2088 without restraints) Performing minimization step: 2502. Total energy = 1872.1308 kcal/mol (1872.1204 without restraints) Performing minimization step: 2503. Total energy = 1872.0427 kcal/mol (1872.0323 without restraints) Performing minimization step: 2504. Total energy = 1871.9546 kcal/mol (1871.9442 without restraints) Performing minimization step: 2505. Total energy = 1871.8665 kcal/mol (1871.8561 without restraints) Performing minimization step: 2506. Total energy = 1871.7779 kcal/mol (1871.7675 without restraints) Performing minimization step: 2507. Total energy = 1871.6899 kcal/mol (1871.6795 without restraints) Performing minimization step: 2508. Total energy = 1871.6017 kcal/mol (1871.5913 without restraints) Performing minimization step: 2509. Total energy = 1871.5137 kcal/mol (1871.5034 without restraints) Performing minimization step: 2510. Total energy = 1871.4258 kcal/mol (1871.4155 without restraints) Performing minimization step: 2511. Total energy = 1871.3378 kcal/mol (1871.3274 without restraints) Performing minimization step: 2512. Total energy = 1871.2497 kcal/mol (1871.2393 without restraints) Performing minimization step: 2513. Total energy = 1871.1619 kcal/mol (1871.1515 without restraints) Performing minimization step: 2514. Total energy = 1871.0741 kcal/mol (1871.0638 without restraints) Performing minimization step: 2515. Total energy = 1870.9860 kcal/mol (1870.9755 without restraints) Performing minimization step: 2516. Total energy = 1870.8985 kcal/mol (1870.8882 without restraints) Performing minimization step: 2517. Total energy = 1870.8107 kcal/mol (1870.8003 without restraints) Performing minimization step: 2518. Total energy = 1870.7233 kcal/mol (1870.7130 without restraints) Performing minimization step: 2519. Total energy = 1870.6358 kcal/mol (1870.6255 without restraints) Performing minimization step: 2520. Total energy = 1870.5484 kcal/mol (1870.5380 without restraints) Performing minimization step: 2521. Total energy = 1870.4608 kcal/mol (1870.4505 without restraints) Performing minimization step: 2522. Total energy = 1870.3733 kcal/mol (1870.3630 without restraints) Performing minimization step: 2523. Total energy = 1870.2858 kcal/mol (1870.2754 without restraints) Performing minimization step: 2524. Total energy = 1870.1983 kcal/mol (1870.1880 without restraints) Performing minimization step: 2525. Total energy = 1870.1109 kcal/mol (1870.1005 without restraints) Performing minimization step: 2526. Total energy = 1870.0234 kcal/mol (1870.0131 without restraints) Performing minimization step: 2527. Total energy = 1869.9357 kcal/mol (1869.9254 without restraints) Performing minimization step: 2528. Total energy = 1869.8483 kcal/mol (1869.8380 without restraints) Performing minimization step: 2529. Total energy = 1869.7610 kcal/mol (1869.7507 without restraints) Performing minimization step: 2530. Total energy = 1869.6740 kcal/mol (1869.6637 without restraints) Performing minimization step: 2531. Total energy = 1869.5867 kcal/mol (1869.5763 without restraints) Performing minimization step: 2532. Total energy = 1869.4994 kcal/mol (1869.4891 without restraints) Performing minimization step: 2533. Total energy = 1869.4118 kcal/mol (1869.4016 without restraints) Performing minimization step: 2534. Total energy = 1869.3253 kcal/mol (1869.3151 without restraints) Performing minimization step: 2535. Total energy = 1869.2381 kcal/mol (1869.2279 without restraints) Performing minimization step: 2536. Total energy = 1869.1513 kcal/mol (1869.1410 without restraints) Performing minimization step: 2537. Total energy = 1869.0642 kcal/mol (1869.0540 without restraints) Performing minimization step: 2538. Total energy = 1868.9772 kcal/mol (1868.9670 without restraints) Performing minimization step: 2539. Total energy = 1868.8903 kcal/mol (1868.8800 without restraints) Performing minimization step: 2540. Total energy = 1868.8033 kcal/mol (1868.7931 without restraints) Performing minimization step: 2541. Total energy = 1868.7164 kcal/mol (1868.7062 without restraints) Performing minimization step: 2542. Total energy = 1868.6296 kcal/mol (1868.6193 without restraints) Performing minimization step: 2543. Total energy = 1868.5425 kcal/mol (1868.5321 without restraints) Performing minimization step: 2544. Total energy = 1868.4554 kcal/mol (1868.4451 without restraints) Performing minimization step: 2545. Total energy = 1868.3686 kcal/mol (1868.3584 without restraints) Performing minimization step: 2546. Total energy = 1868.2819 kcal/mol (1868.2717 without restraints) Performing minimization step: 2547. Total energy = 1868.1950 kcal/mol (1868.1848 without restraints) Performing minimization step: 2548. Total energy = 1868.1083 kcal/mol (1868.0980 without restraints) Performing minimization step: 2549. Total energy = 1868.0216 kcal/mol (1868.0114 without restraints) Performing minimization step: 2550. Total energy = 1867.9351 kcal/mol (1867.9249 without restraints) Performing minimization step: 2551. Total energy = 1867.8483 kcal/mol (1867.8381 without restraints) Performing minimization step: 2552. Total energy = 1867.7617 kcal/mol (1867.7515 without restraints) Performing minimization step: 2553. Total energy = 1867.6752 kcal/mol (1867.6650 without restraints) Performing minimization step: 2554. Total energy = 1867.5884 kcal/mol (1867.5782 without restraints) Performing minimization step: 2555. Total energy = 1867.5020 kcal/mol (1867.4918 without restraints) Performing minimization step: 2556. Total energy = 1867.4159 kcal/mol (1867.4057 without restraints) Performing minimization step: 2557. Total energy = 1867.3295 kcal/mol (1867.3193 without restraints) Performing minimization step: 2558. Total energy = 1867.2434 kcal/mol (1867.2332 without restraints) Performing minimization step: 2559. Total energy = 1867.1570 kcal/mol (1867.1467 without restraints) Performing minimization step: 2560. Total energy = 1867.0708 kcal/mol (1867.0606 without restraints) Performing minimization step: 2561. Total energy = 1866.9845 kcal/mol (1866.9744 without restraints) Performing minimization step: 2562. Total energy = 1866.8983 kcal/mol (1866.8881 without restraints) Performing minimization step: 2563. Total energy = 1866.8121 kcal/mol (1866.8019 without restraints) Performing minimization step: 2564. Total energy = 1866.7261 kcal/mol (1866.7160 without restraints) Performing minimization step: 2565. Total energy = 1866.6402 kcal/mol (1866.6299 without restraints) Performing minimization step: 2566. Total energy = 1866.5539 kcal/mol (1866.5438 without restraints) Performing minimization step: 2567. Total energy = 1866.4678 kcal/mol (1866.4577 without restraints) Performing minimization step: 2568. Total energy = 1866.3818 kcal/mol (1866.3717 without restraints) Performing minimization step: 2569. Total energy = 1866.2957 kcal/mol (1866.2854 without restraints) Performing minimization step: 2570. Total energy = 1866.2096 kcal/mol (1866.1994 without restraints) Performing minimization step: 2571. Total energy = 1866.1236 kcal/mol (1866.1135 without restraints) Performing minimization step: 2572. Total energy = 1866.0375 kcal/mol (1866.0274 without restraints) Performing minimization step: 2573. Total energy = 1865.9516 kcal/mol (1865.9415 without restraints) Performing minimization step: 2574. Total energy = 1865.8660 kcal/mol (1865.8559 without restraints) Performing minimization step: 2575. Total energy = 1865.7802 kcal/mol (1865.7700 without restraints) Performing minimization step: 2576. Total energy = 1865.6945 kcal/mol (1865.6846 without restraints) Performing minimization step: 2577. Total energy = 1865.6090 kcal/mol (1865.5988 without restraints) Performing minimization step: 2578. Total energy = 1865.5232 kcal/mol (1865.5131 without restraints) Performing minimization step: 2579. Total energy = 1865.4376 kcal/mol (1865.4275 without restraints) Performing minimization step: 2580. Total energy = 1865.3519 kcal/mol (1865.3417 without restraints) Performing minimization step: 2581. Total energy = 1865.2659 kcal/mol (1865.2554 without restraints) Performing minimization step: 2582. Total energy = 1865.1799 kcal/mol (1865.1698 without restraints) Performing minimization step: 2583. Total energy = 1865.0945 kcal/mol (1865.0846 without restraints) Performing minimization step: 2584. Total energy = 1865.0093 kcal/mol (1864.9993 without restraints) Performing minimization step: 2585. Total energy = 1864.9239 kcal/mol (1864.9138 without restraints) Performing minimization step: 2586. Total energy = 1864.8380 kcal/mol (1864.8278 without restraints) Performing minimization step: 2587. Total energy = 1864.7522 kcal/mol (1864.7421 without restraints) Performing minimization step: 2588. Total energy = 1864.6668 kcal/mol (1864.6567 without restraints) Performing minimization step: 2589. Total energy = 1864.5814 kcal/mol (1864.5714 without restraints) Performing minimization step: 2590. Total energy = 1864.4961 kcal/mol (1864.4860 without restraints) Performing minimization step: 2591. Total energy = 1864.4110 kcal/mol (1864.4009 without restraints) Performing minimization step: 2592. Total energy = 1864.3256 kcal/mol (1864.3155 without restraints) Performing minimization step: 2593. Total energy = 1864.2404 kcal/mol (1864.2303 without restraints) Performing minimization step: 2594. Total energy = 1864.1552 kcal/mol (1864.1451 without restraints) Performing minimization step: 2595. Total energy = 1864.0700 kcal/mol (1864.0599 without restraints) Performing minimization step: 2596. Total energy = 1863.9849 kcal/mol (1863.9750 without restraints) Performing minimization step: 2597. Total energy = 1863.9000 kcal/mol (1863.8900 without restraints) Performing minimization step: 2598. Total energy = 1863.8150 kcal/mol (1863.8049 without restraints) Performing minimization step: 2599. Total energy = 1863.7300 kcal/mol (1863.7200 without restraints) Performing minimization step: 2600. Total energy = 1863.6450 kcal/mol (1863.6350 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e90c65df/tmp/ENST00000666628_refx/ENST00000666628_refx.pdb ...Done. Performing minimization step: 2601. Total energy = 1863.5600 kcal/mol (1863.5499 without restraints) Performing minimization step: 2602. Total energy = 1863.4751 kcal/mol (1863.4651 without restraints) Performing minimization step: 2603. Total energy = 1863.3902 kcal/mol (1863.3801 without restraints) Performing minimization step: 2604. Total energy = 1863.3050 kcal/mol (1863.2950 without restraints) Performing minimization step: 2605. Total energy = 1863.2201 kcal/mol (1863.2101 without restraints) Performing minimization step: 2606. Total energy = 1863.1350 kcal/mol (1863.1250 without restraints) Performing minimization step: 2607. Total energy = 1863.0502 kcal/mol (1863.0401 without restraints) Performing minimization step: 2608. Total energy = 1862.9651 kcal/mol (1862.9551 without restraints) Performing minimization step: 2609. Total energy = 1862.8803 kcal/mol (1862.8704 without restraints) Performing minimization step: 2610. Total energy = 1862.7956 kcal/mol (1862.7856 without restraints) Performing minimization step: 2611. Total energy = 1862.7108 kcal/mol (1862.7008 without restraints) Performing minimization step: 2612. Total energy = 1862.6261 kcal/mol (1862.6161 without restraints) Performing minimization step: 2613. Total energy = 1862.5414 kcal/mol (1862.5314 without restraints) Performing minimization step: 2614. Total energy = 1862.4566 kcal/mol (1862.4465 without restraints) Performing minimization step: 2615. Total energy = 1862.3719 kcal/mol (1862.3619 without restraints) Performing minimization step: 2616. Total energy = 1862.2874 kcal/mol (1862.2774 without restraints) Performing minimization step: 2617. Total energy = 1862.2028 kcal/mol (1862.1928 without restraints) Performing minimization step: 2618. Total energy = 1862.1183 kcal/mol (1862.1083 without restraints) Performing minimization step: 2619. Total energy = 1862.0338 kcal/mol (1862.0238 without restraints) Performing minimization step: 2620. Total energy = 1861.9495 kcal/mol (1861.9395 without restraints) Performing minimization step: 2621. Total energy = 1861.8651 kcal/mol (1861.8551 without restraints) Performing minimization step: 2622. Total energy = 1861.7807 kcal/mol (1861.7707 without restraints) Performing minimization step: 2623. Total energy = 1861.6965 kcal/mol (1861.6865 without restraints) Performing minimization step: 2624. Total energy = 1861.6124 kcal/mol (1861.6025 without restraints) Performing minimization step: 2625. Total energy = 1861.5284 kcal/mol (1861.5184 without restraints) Performing minimization step: 2626. Total energy = 1861.4441 kcal/mol (1861.4341 without restraints) Performing minimization step: 2627. Total energy = 1861.3598 kcal/mol (1861.3499 without restraints) Performing minimization step: 2628. Total energy = 1861.2756 kcal/mol (1861.2657 without restraints) Performing minimization step: 2629. Total energy = 1861.1915 kcal/mol (1861.1815 without restraints) Performing minimization step: 2630. Total energy = 1861.1073 kcal/mol (1861.0974 without restraints) Performing minimization step: 2631. Total energy = 1861.0229 kcal/mol (1861.0130 without restraints) Performing minimization step: 2632. Total energy = 1860.9388 kcal/mol (1860.9289 without restraints) Performing minimization step: 2633. Total energy = 1860.8550 kcal/mol (1860.8451 without restraints) Performing minimization step: 2634. Total energy = 1860.7709 kcal/mol (1860.7610 without restraints) Performing minimization step: 2635. Total energy = 1860.6871 kcal/mol (1860.6772 without restraints) Performing minimization step: 2636. Total energy = 1860.6033 kcal/mol (1860.5934 without restraints) Performing minimization step: 2637. Total energy = 1860.5193 kcal/mol (1860.5094 without restraints) Performing minimization step: 2638. Total energy = 1860.4354 kcal/mol (1860.4255 without restraints) Performing minimization step: 2639. Total energy = 1860.3515 kcal/mol (1860.3416 without restraints) Performing minimization step: 2640. Total energy = 1860.2677 kcal/mol (1860.2578 without restraints) Performing minimization step: 2641. Total energy = 1860.1836 kcal/mol (1860.1737 without restraints) Performing minimization step: 2642. Total energy = 1860.0998 kcal/mol (1860.0899 without restraints) Performing minimization step: 2643. Total energy = 1860.0160 kcal/mol (1860.0061 without restraints) Performing minimization step: 2644. Total energy = 1859.9320 kcal/mol (1859.9220 without restraints) Performing minimization step: 2645. Total energy = 1859.8481 kcal/mol (1859.8382 without restraints) Performing minimization step: 2646. Total energy = 1859.7644 kcal/mol (1859.7545 without restraints) Performing minimization step: 2647. Total energy = 1859.6812 kcal/mol (1859.6713 without restraints) Performing minimization step: 2648. Total energy = 1859.5975 kcal/mol (1859.5876 without restraints) Performing minimization step: 2649. Total energy = 1859.5137 kcal/mol (1859.5038 without restraints) Performing minimization step: 2650. Total energy = 1859.4301 kcal/mol (1859.4202 without restraints) Performing minimization step: 2651. Total energy = 1859.3465 kcal/mol (1859.3366 without restraints) Performing minimization step: 2652. Total energy = 1859.2628 kcal/mol (1859.2529 without restraints) Performing minimization step: 2653. Total energy = 1859.1794 kcal/mol (1859.1696 without restraints) Performing minimization step: 2654. Total energy = 1859.0958 kcal/mol (1859.0860 without restraints) Performing minimization step: 2655. Total energy = 1859.0124 kcal/mol (1859.0026 without restraints) Performing minimization step: 2656. Total energy = 1858.9290 kcal/mol (1858.9191 without restraints) Performing minimization step: 2657. Total energy = 1858.8453 kcal/mol (1858.8354 without restraints) Performing minimization step: 2658. Total energy = 1858.7618 kcal/mol (1858.7520 without restraints) Performing minimization step: 2659. Total energy = 1858.6785 kcal/mol (1858.6687 without restraints) Performing minimization step: 2660. Total energy = 1858.5952 kcal/mol (1858.5854 without restraints) Performing minimization step: 2661. Total energy = 1858.5120 kcal/mol (1858.5021 without restraints) Performing minimization step: 2662. Total energy = 1858.4287 kcal/mol (1858.4188 without restraints) Performing minimization step: 2663. Total energy = 1858.3457 kcal/mol (1858.3359 without restraints) Performing minimization step: 2664. Total energy = 1858.2625 kcal/mol (1858.2527 without restraints) Performing minimization step: 2665. Total energy = 1858.1793 kcal/mol (1858.1695 without restraints) Performing minimization step: 2666. Total energy = 1858.0962 kcal/mol (1858.0864 without restraints) Performing minimization step: 2667. Total energy = 1858.0130 kcal/mol (1858.0032 without restraints) Performing minimization step: 2668. Total energy = 1857.9301 kcal/mol (1857.9205 without restraints) Performing minimization step: 2669. Total energy = 1857.8471 kcal/mol (1857.8373 without restraints) Performing minimization step: 2670. Total energy = 1857.7640 kcal/mol (1857.7541 without restraints) Performing minimization step: 2671. Total energy = 1857.6809 kcal/mol (1857.6711 without restraints) Performing minimization step: 2672. Total energy = 1857.5979 kcal/mol (1857.5881 without restraints) Performing minimization step: 2673. Total energy = 1857.5149 kcal/mol (1857.5052 without restraints) Performing minimization step: 2674. Total energy = 1857.4320 kcal/mol (1857.4222 without restraints) Performing minimization step: 2675. Total energy = 1857.3492 kcal/mol (1857.3394 without restraints) Performing minimization step: 2676. Total energy = 1857.2661 kcal/mol (1857.2563 without restraints) Performing minimization step: 2677. Total energy = 1857.1832 kcal/mol (1857.1735 without restraints) Performing minimization step: 2678. Total energy = 1857.1002 kcal/mol (1857.0905 without restraints) Performing minimization step: 2679. Total energy = 1857.0181 kcal/mol (1857.0083 without restraints) Performing minimization step: 2680. Total energy = 1856.9354 kcal/mol (1856.9256 without restraints) Performing minimization step: 2681. Total energy = 1856.8525 kcal/mol (1856.8427 without restraints) Performing minimization step: 2682. Total energy = 1856.7698 kcal/mol (1856.7600 without restraints) Performing minimization step: 2683. Total energy = 1856.6872 kcal/mol (1856.6774 without restraints) Performing minimization step: 2684. Total energy = 1856.6045 kcal/mol (1856.5948 without restraints) Performing minimization step: 2685. Total energy = 1856.5223 kcal/mol (1856.5126 without restraints) Performing minimization step: 2686. Total energy = 1856.4397 kcal/mol (1856.4299 without restraints) Performing minimization step: 2687. Total energy = 1856.3570 kcal/mol (1856.3472 without restraints) Performing minimization step: 2688. Total energy = 1856.2744 kcal/mol (1856.2647 without restraints) Performing minimization step: 2689. Total energy = 1856.1918 kcal/mol (1856.1821 without restraints) Performing minimization step: 2690. Total energy = 1856.1092 kcal/mol (1856.0995 without restraints) Performing minimization step: 2691. Total energy = 1856.0268 kcal/mol (1856.0170 without restraints) Performing minimization step: 2692. Total energy = 1855.9445 kcal/mol (1855.9349 without restraints) Performing minimization step: 2693. Total energy = 1855.8624 kcal/mol (1855.8527 without restraints) Performing minimization step: 2694. Total energy = 1855.7801 kcal/mol (1855.7703 without restraints) Performing minimization step: 2695. Total energy = 1855.6977 kcal/mol (1855.6880 without restraints) Performing minimization step: 2696. Total energy = 1855.6151 kcal/mol (1855.6054 without restraints) Performing minimization step: 2697. Total energy = 1855.5328 kcal/mol (1855.5231 without restraints) Performing minimization step: 2698. Total energy = 1855.4508 kcal/mol (1855.4410 without restraints) Performing minimization step: 2699. Total energy = 1855.3685 kcal/mol (1855.3588 without restraints) Performing minimization step: 2700. Total energy = 1855.2865 kcal/mol (1855.2768 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e90c65df/tmp/ENST00000666628_refx/ENST00000666628_refx.pdb ...Done. Performing minimization step: 2701. Total energy = 1855.2039 kcal/mol (1855.1941 without restraints) Performing minimization step: 2702. Total energy = 1855.1216 kcal/mol (1855.1119 without restraints) Performing minimization step: 2703. Total energy = 1855.0395 kcal/mol (1855.0298 without restraints) Performing minimization step: 2704. Total energy = 1854.9576 kcal/mol (1854.9479 without restraints) Performing minimization step: 2705. Total energy = 1854.8752 kcal/mol (1854.8655 without restraints) Performing minimization step: 2706. Total energy = 1854.7933 kcal/mol (1854.7836 without restraints) Performing minimization step: 2707. Total energy = 1854.7111 kcal/mol (1854.7014 without restraints) Performing minimization step: 2708. Total energy = 1854.6291 kcal/mol (1854.6194 without restraints) Performing minimization step: 2709. Total energy = 1854.5469 kcal/mol (1854.5372 without restraints) Performing minimization step: 2710. Total energy = 1854.4649 kcal/mol (1854.4553 without restraints) Performing minimization step: 2711. Total energy = 1854.3830 kcal/mol (1854.3733 without restraints) Performing minimization step: 2712. Total energy = 1854.3011 kcal/mol (1854.2915 without restraints) Performing minimization step: 2713. Total energy = 1854.2192 kcal/mol (1854.2096 without restraints) Performing minimization step: 2714. Total energy = 1854.1374 kcal/mol (1854.1277 without restraints) Performing minimization step: 2715. Total energy = 1854.0555 kcal/mol (1854.0458 without restraints) Performing minimization step: 2716. Total energy = 1853.9735 kcal/mol (1853.9638 without restraints) Performing minimization step: 2717. Total energy = 1853.8919 kcal/mol (1853.8822 without restraints) Performing minimization step: 2718. Total energy = 1853.8101 kcal/mol (1853.8004 without restraints) Performing minimization step: 2719. Total energy = 1853.7284 kcal/mol (1853.7187 without restraints) Performing minimization step: 2720. Total energy = 1853.6467 kcal/mol (1853.6370 without restraints) Performing minimization step: 2721. Total energy = 1853.5650 kcal/mol (1853.5553 without restraints) Performing minimization step: 2722. Total energy = 1853.4837 kcal/mol (1853.4743 without restraints) Performing minimization step: 2723. Total energy = 1853.4023 kcal/mol (1853.3927 without restraints) Performing minimization step: 2724. Total energy = 1853.3207 kcal/mol (1853.3111 without restraints) Performing minimization step: 2725. Total energy = 1853.2391 kcal/mol (1853.2295 without restraints) Performing minimization step: 2726. Total energy = 1853.1571 kcal/mol (1853.1475 without restraints) Performing minimization step: 2727. Total energy = 1853.0756 kcal/mol (1853.0660 without restraints) Performing minimization step: 2728. Total energy = 1852.9939 kcal/mol (1852.9842 without restraints) Performing minimization step: 2729. Total energy = 1852.9122 kcal/mol (1852.9026 without restraints) Performing minimization step: 2730. Total energy = 1852.8307 kcal/mol (1852.8212 without restraints) Performing minimization step: 2731. Total energy = 1852.7493 kcal/mol (1852.7397 without restraints) Performing minimization step: 2732. Total energy = 1852.6680 kcal/mol (1852.6585 without restraints) Performing minimization step: 2733. Total energy = 1852.5867 kcal/mol (1852.5771 without restraints) Performing minimization step: 2734. Total energy = 1852.5055 kcal/mol (1852.4959 without restraints) Performing minimization step: 2735. Total energy = 1852.4242 kcal/mol (1852.4146 without restraints) Performing minimization step: 2736. Total energy = 1852.3433 kcal/mol (1852.3337 without restraints) Performing minimization step: 2737. Total energy = 1852.2623 kcal/mol (1852.2527 without restraints) Performing minimization step: 2738. Total energy = 1852.1810 kcal/mol (1852.1714 without restraints) Performing minimization step: 2739. Total energy = 1852.0998 kcal/mol (1852.0902 without restraints) Performing minimization step: 2740. Total energy = 1852.0186 kcal/mol (1852.0090 without restraints) Performing minimization step: 2741. Total energy = 1851.9376 kcal/mol (1851.9282 without restraints) Performing minimization step: 2742. Total energy = 1851.8566 kcal/mol (1851.8471 without restraints) Performing minimization step: 2743. Total energy = 1851.7755 kcal/mol (1851.7659 without restraints) Performing minimization step: 2744. Total energy = 1851.6943 kcal/mol (1851.6848 without restraints) Performing minimization step: 2745. Total energy = 1851.6132 kcal/mol (1851.6037 without restraints) Performing minimization step: 2746. Total energy = 1851.5322 kcal/mol (1851.5226 without restraints) Performing minimization step: 2747. Total energy = 1851.4511 kcal/mol (1851.4416 without restraints) Performing minimization step: 2748. Total energy = 1851.3702 kcal/mol (1851.3606 without restraints) Performing minimization step: 2749. Total energy = 1851.2892 kcal/mol (1851.2796 without restraints) Performing minimization step: 2750. Total energy = 1851.2082 kcal/mol (1851.1987 without restraints) Performing minimization step: 2751. Total energy = 1851.1277 kcal/mol (1851.1181 without restraints) Performing minimization step: 2752. Total energy = 1851.0467 kcal/mol (1851.0372 without restraints) Performing minimization step: 2753. Total energy = 1850.9658 kcal/mol (1850.9562 without restraints) Performing minimization step: 2754. Total energy = 1850.8847 kcal/mol (1850.8752 without restraints) Performing minimization step: 2755. Total energy = 1850.8039 kcal/mol (1850.7943 without restraints) Performing minimization step: 2756. Total energy = 1850.7238 kcal/mol (1850.7142 without restraints) Performing minimization step: 2757. Total energy = 1850.6431 kcal/mol (1850.6336 without restraints) Performing minimization step: 2758. Total energy = 1850.5625 kcal/mol (1850.5530 without restraints) Performing minimization step: 2759. Total energy = 1850.4815 kcal/mol (1850.4720 without restraints) Performing minimization step: 2760. Total energy = 1850.4008 kcal/mol (1850.3913 without restraints) Performing minimization step: 2761. Total energy = 1850.3201 kcal/mol (1850.3106 without restraints) Performing minimization step: 2762. Total energy = 1850.2394 kcal/mol (1850.2299 without restraints) Performing minimization step: 2763. Total energy = 1850.1587 kcal/mol (1850.1492 without restraints) Performing minimization step: 2764. Total energy = 1850.0779 kcal/mol (1850.0683 without restraints) Performing minimization step: 2765. Total energy = 1849.9972 kcal/mol (1849.9876 without restraints) Performing minimization step: 2766. Total energy = 1849.9164 kcal/mol (1849.9068 without restraints) Performing minimization step: 2767. Total energy = 1849.8358 kcal/mol (1849.8263 without restraints) Performing minimization step: 2768. Total energy = 1849.7549 kcal/mol (1849.7453 without restraints) Performing minimization step: 2769. Total energy = 1849.6745 kcal/mol (1849.6650 without restraints) Performing minimization step: 2770. Total energy = 1849.5939 kcal/mol (1849.5844 without restraints) Performing minimization step: 2771. Total energy = 1849.5134 kcal/mol (1849.5039 without restraints) Performing minimization step: 2772. Total energy = 1849.4329 kcal/mol (1849.4235 without restraints) Performing minimization step: 2773. Total energy = 1849.3525 kcal/mol (1849.3430 without restraints) Performing minimization step: 2774. Total energy = 1849.2723 kcal/mol (1849.2628 without restraints) Performing minimization step: 2775. Total energy = 1849.1918 kcal/mol (1849.1822 without restraints) Performing minimization step: 2776. Total energy = 1849.1111 kcal/mol (1849.1016 without restraints) Performing minimization step: 2777. Total energy = 1849.0309 kcal/mol (1849.0215 without restraints) Performing minimization step: 2778. Total energy = 1848.9505 kcal/mol (1848.9410 without restraints) Performing minimization step: 2779. Total energy = 1848.8705 kcal/mol (1848.8611 without restraints) Performing minimization step: 2780. Total energy = 1848.7905 kcal/mol (1848.7810 without restraints) Performing minimization step: 2781. Total energy = 1848.7100 kcal/mol (1848.7005 without restraints) Performing minimization step: 2782. Total energy = 1848.6296 kcal/mol (1848.6201 without restraints) Performing minimization step: 2783. Total energy = 1848.5497 kcal/mol (1848.5403 without restraints) Performing minimization step: 2784. Total energy = 1848.4695 kcal/mol (1848.4600 without restraints) Performing minimization step: 2785. Total energy = 1848.3893 kcal/mol (1848.3798 without restraints) Performing minimization step: 2786. Total energy = 1848.3087 kcal/mol (1848.2993 without restraints) Performing minimization step: 2787. Total energy = 1848.2285 kcal/mol (1848.2191 without restraints) Performing minimization step: 2788. Total energy = 1848.1484 kcal/mol (1848.1390 without restraints) Performing minimization step: 2789. Total energy = 1848.0683 kcal/mol (1848.0589 without restraints) Performing minimization step: 2790. Total energy = 1847.9883 kcal/mol (1847.9788 without restraints) Performing minimization step: 2791. Total energy = 1847.9082 kcal/mol (1847.8988 without restraints) Performing minimization step: 2792. Total energy = 1847.8282 kcal/mol (1847.8188 without restraints) Performing minimization step: 2793. Total energy = 1847.7482 kcal/mol (1847.7387 without restraints) Performing minimization step: 2794. Total energy = 1847.6682 kcal/mol (1847.6588 without restraints) Performing minimization step: 2795. Total energy = 1847.5883 kcal/mol (1847.5788 without restraints) Performing minimization step: 2796. Total energy = 1847.5085 kcal/mol (1847.4991 without restraints) Performing minimization step: 2797. Total energy = 1847.4281 kcal/mol (1847.4187 without restraints) Performing minimization step: 2798. Total energy = 1847.3482 kcal/mol (1847.3388 without restraints) Performing minimization step: 2799. Total energy = 1847.2683 kcal/mol (1847.2589 without restraints) Performing minimization step: 2800. Total energy = 1847.1885 kcal/mol (1847.1791 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e90c65df/tmp/ENST00000666628_refx/ENST00000666628_refx.pdb ...Done. Performing minimization step: 2801. Total energy = 1847.1086 kcal/mol (1847.0992 without restraints) Performing minimization step: 2802. Total energy = 1847.0288 kcal/mol (1847.0194 without restraints) Performing minimization step: 2803. Total energy = 1846.9490 kcal/mol (1846.9396 without restraints) Performing minimization step: 2804. Total energy = 1846.8694 kcal/mol (1846.8600 without restraints) Performing minimization step: 2805. Total energy = 1846.7896 kcal/mol (1846.7802 without restraints) Performing minimization step: 2806. Total energy = 1846.7099 kcal/mol (1846.7005 without restraints) Performing minimization step: 2807. Total energy = 1846.6302 kcal/mol (1846.6208 without restraints) Performing minimization step: 2808. Total energy = 1846.5503 kcal/mol (1846.5409 without restraints) Performing minimization step: 2809. Total energy = 1846.4701 kcal/mol (1846.4606 without restraints) Performing minimization step: 2810. Total energy = 1846.3905 kcal/mol (1846.3811 without restraints) Performing minimization step: 2811. Total energy = 1846.3109 kcal/mol (1846.3015 without restraints) Performing minimization step: 2812. Total energy = 1846.2312 kcal/mol (1846.2219 without restraints) Performing minimization step: 2813. Total energy = 1846.1518 kcal/mol (1846.1424 without restraints) Performing minimization step: 2814. Total energy = 1846.0721 kcal/mol (1846.0627 without restraints) Performing minimization step: 2815. Total energy = 1845.9921 kcal/mol (1845.9827 without restraints) Performing minimization step: 2816. Total energy = 1845.9126 kcal/mol (1845.9032 without restraints) Performing minimization step: 2817. Total energy = 1845.8330 kcal/mol (1845.8236 without restraints) Performing minimization step: 2818. Total energy = 1845.7533 kcal/mol (1845.7440 without restraints) Performing minimization step: 2819. Total energy = 1845.6738 kcal/mol (1845.6644 without restraints) Performing minimization step: 2820. Total energy = 1845.5944 kcal/mol (1845.5850 without restraints) Performing minimization step: 2821. Total energy = 1845.5149 kcal/mol (1845.5056 without restraints) Performing minimization step: 2822. Total energy = 1845.4354 kcal/mol (1845.4261 without restraints) Performing minimization step: 2823. Total energy = 1845.3558 kcal/mol (1845.3465 without restraints) Performing minimization step: 2824. Total energy = 1845.2765 kcal/mol (1845.2671 without restraints) Performing minimization step: 2825. Total energy = 1845.1971 kcal/mol (1845.1877 without restraints) Performing minimization step: 2826. Total energy = 1845.1178 kcal/mol (1845.1084 without restraints) Performing minimization step: 2827. Total energy = 1845.0386 kcal/mol (1845.0292 without restraints) Performing minimization step: 2828. Total energy = 1844.9593 kcal/mol (1844.9499 without restraints) Performing minimization step: 2829. Total energy = 1844.8801 kcal/mol (1844.8709 without restraints) Performing minimization step: 2830. Total energy = 1844.8007 kcal/mol (1844.7914 without restraints) Performing minimization step: 2831. Total energy = 1844.7217 kcal/mol (1844.7123 without restraints) Performing minimization step: 2832. Total energy = 1844.6424 kcal/mol (1844.6330 without restraints) Performing minimization step: 2833. Total energy = 1844.5630 kcal/mol (1844.5536 without restraints) Performing minimization step: 2834. Total energy = 1844.4838 kcal/mol (1844.4745 without restraints) Performing minimization step: 2835. Total energy = 1844.4046 kcal/mol (1844.3952 without restraints) Performing minimization step: 2836. Total energy = 1844.3255 kcal/mol (1844.3161 without restraints) Performing minimization step: 2837. Total energy = 1844.2465 kcal/mol (1844.2372 without restraints) Performing minimization step: 2838. Total energy = 1844.1675 kcal/mol (1844.1581 without restraints) Performing minimization step: 2839. Total energy = 1844.0884 kcal/mol (1844.0791 without restraints) Performing minimization step: 2840. Total energy = 1844.0093 kcal/mol (1844.0000 without restraints) Performing minimization step: 2841. Total energy = 1843.9303 kcal/mol (1843.9210 without restraints) Performing minimization step: 2842. Total energy = 1843.8512 kcal/mol (1843.8419 without restraints) Performing minimization step: 2843. Total energy = 1843.7720 kcal/mol (1843.7627 without restraints) Performing minimization step: 2844. Total energy = 1843.6925 kcal/mol (1843.6832 without restraints) Performing minimization step: 2845. Total energy = 1843.6137 kcal/mol (1843.6044 without restraints) Performing minimization step: 2846. Total energy = 1843.5347 kcal/mol (1843.5254 without restraints) Performing minimization step: 2847. Total energy = 1843.4558 kcal/mol (1843.4465 without restraints) Performing minimization step: 2848. Total energy = 1843.3769 kcal/mol (1843.3675 without restraints) Performing minimization step: 2849. Total energy = 1843.2979 kcal/mol (1843.2886 without restraints) Performing minimization step: 2850. Total energy = 1843.2189 kcal/mol (1843.2095 without restraints) Performing minimization step: 2851. Total energy = 1843.1399 kcal/mol (1843.1305 without restraints) Performing minimization step: 2852. Total energy = 1843.0610 kcal/mol (1843.0517 without restraints) Performing minimization step: 2853. Total energy = 1842.9825 kcal/mol (1842.9732 without restraints) Performing minimization step: 2854. Total energy = 1842.9036 kcal/mol (1842.8942 without restraints) Performing minimization step: 2855. Total energy = 1842.8248 kcal/mol (1842.8155 without restraints) Performing minimization step: 2856. Total energy = 1842.7460 kcal/mol (1842.7367 without restraints) Performing minimization step: 2857. Total energy = 1842.6674 kcal/mol (1842.6581 without restraints) Performing minimization step: 2858. Total energy = 1842.5886 kcal/mol (1842.5794 without restraints) Performing minimization step: 2859. Total energy = 1842.5097 kcal/mol (1842.5004 without restraints) Performing minimization step: 2860. Total energy = 1842.4308 kcal/mol (1842.4215 without restraints) Performing minimization step: 2861. Total energy = 1842.3523 kcal/mol (1842.3430 without restraints) Performing minimization step: 2862. Total energy = 1842.2740 kcal/mol (1842.2648 without restraints) Performing minimization step: 2863. Total energy = 1842.1950 kcal/mol (1842.1856 without restraints) Performing minimization step: 2864. Total energy = 1842.1163 kcal/mol (1842.1070 without restraints) Performing minimization step: 2865. Total energy = 1842.0376 kcal/mol (1842.0284 without restraints) Performing minimization step: 2866. Total energy = 1841.9590 kcal/mol (1841.9498 without restraints) Performing minimization step: 2867. Total energy = 1841.8805 kcal/mol (1841.8712 without restraints) Performing minimization step: 2868. Total energy = 1841.8019 kcal/mol (1841.7926 without restraints) Performing minimization step: 2869. Total energy = 1841.7236 kcal/mol (1841.7143 without restraints) Performing minimization step: 2870. Total energy = 1841.6449 kcal/mol (1841.6356 without restraints) Performing minimization step: 2871. Total energy = 1841.5663 kcal/mol (1841.5571 without restraints) Performing minimization step: 2872. Total energy = 1841.4878 kcal/mol (1841.4786 without restraints) Performing minimization step: 2873. Total energy = 1841.4094 kcal/mol (1841.4001 without restraints) Performing minimization step: 2874. Total energy = 1841.3309 kcal/mol (1841.3217 without restraints) Performing minimization step: 2875. Total energy = 1841.2527 kcal/mol (1841.2435 without restraints) Performing minimization step: 2876. Total energy = 1841.1741 kcal/mol (1841.1649 without restraints) Performing minimization step: 2877. Total energy = 1841.0957 kcal/mol (1841.0865 without restraints) Performing minimization step: 2878. Total energy = 1841.0173 kcal/mol (1841.0081 without restraints) Performing minimization step: 2879. Total energy = 1840.9388 kcal/mol (1840.9295 without restraints) Performing minimization step: 2880. Total energy = 1840.8604 kcal/mol (1840.8511 without restraints) Performing minimization step: 2881. Total energy = 1840.7824 kcal/mol (1840.7731 without restraints) Performing minimization step: 2882. Total energy = 1840.7042 kcal/mol (1840.6950 without restraints) Performing minimization step: 2883. Total energy = 1840.6259 kcal/mol (1840.6165 without restraints) Performing minimization step: 2884. Total energy = 1840.5475 kcal/mol (1840.5383 without restraints) Performing minimization step: 2885. Total energy = 1840.4694 kcal/mol (1840.4602 without restraints) Performing minimization step: 2886. Total energy = 1840.3913 kcal/mol (1840.3821 without restraints) Performing minimization step: 2887. Total energy = 1840.3133 kcal/mol (1840.3041 without restraints) Performing minimization step: 2888. Total energy = 1840.2353 kcal/mol (1840.2260 without restraints) Performing minimization step: 2889. Total energy = 1840.1569 kcal/mol (1840.1477 without restraints) Performing minimization step: 2890. Total energy = 1840.0790 kcal/mol (1840.0698 without restraints) Performing minimization step: 2891. Total energy = 1840.0004 kcal/mol (1839.9912 without restraints) Performing minimization step: 2892. Total energy = 1839.9225 kcal/mol (1839.9132 without restraints) Performing minimization step: 2893. Total energy = 1839.8445 kcal/mol (1839.8353 without restraints) Performing minimization step: 2894. Total energy = 1839.7662 kcal/mol (1839.7570 without restraints) Performing minimization step: 2895. Total energy = 1839.6881 kcal/mol (1839.6789 without restraints) Performing minimization step: 2896. Total energy = 1839.6100 kcal/mol (1839.6008 without restraints) Performing minimization step: 2897. Total energy = 1839.5322 kcal/mol (1839.5230 without restraints) Performing minimization step: 2898. Total energy = 1839.4543 kcal/mol (1839.4452 without restraints) Performing minimization step: 2899. Total energy = 1839.3764 kcal/mol (1839.3672 without restraints) Performing minimization step: 2900. Total energy = 1839.2984 kcal/mol (1839.2892 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e90c65df/tmp/ENST00000666628_refx/ENST00000666628_refx.pdb ...Done. Performing minimization step: 2901. Total energy = 1839.2204 kcal/mol (1839.2112 without restraints) Performing minimization step: 2902. Total energy = 1839.1424 kcal/mol (1839.1332 without restraints) Performing minimization step: 2903. Total energy = 1839.0646 kcal/mol (1839.0555 without restraints) Performing minimization step: 2904. Total energy = 1838.9865 kcal/mol (1838.9773 without restraints) Performing minimization step: 2905. Total energy = 1838.9086 kcal/mol (1838.8994 without restraints) Performing minimization step: 2906. Total energy = 1838.8308 kcal/mol (1838.8216 without restraints) Performing minimization step: 2907. Total energy = 1838.7529 kcal/mol (1838.7438 without restraints) Performing minimization step: 2908. Total energy = 1838.6754 kcal/mol (1838.6662 without restraints) Performing minimization step: 2909. Total energy = 1838.5978 kcal/mol (1838.5886 without restraints) Performing minimization step: 2910. Total energy = 1838.5199 kcal/mol (1838.5107 without restraints) Performing minimization step: 2911. Total energy = 1838.4422 kcal/mol (1838.4331 without restraints) Performing minimization step: 2912. Total energy = 1838.3644 kcal/mol (1838.3552 without restraints) Performing minimization step: 2913. Total energy = 1838.2866 kcal/mol (1838.2774 without restraints) Performing minimization step: 2914. Total energy = 1838.2088 kcal/mol (1838.1996 without restraints) Performing minimization step: 2915. Total energy = 1838.1312 kcal/mol (1838.1220 without restraints) Performing minimization step: 2916. Total energy = 1838.0533 kcal/mol (1838.0440 without restraints) Performing minimization step: 2917. Total energy = 1837.9754 kcal/mol (1837.9663 without restraints) Performing minimization step: 2918. Total energy = 1837.8977 kcal/mol (1837.8886 without restraints) Performing minimization step: 2919. Total energy = 1837.8200 kcal/mol (1837.8108 without restraints) Performing minimization step: 2920. Total energy = 1837.7423 kcal/mol (1837.7332 without restraints) Performing minimization step: 2921. Total energy = 1837.6646 kcal/mol (1837.6555 without restraints) Performing minimization step: 2922. Total energy = 1837.5866 kcal/mol (1837.5774 without restraints) Performing minimization step: 2923. Total energy = 1837.5087 kcal/mol (1837.4995 without restraints) Performing minimization step: 2924. Total energy = 1837.4311 kcal/mol (1837.4219 without restraints) Performing minimization step: 2925. Total energy = 1837.3534 kcal/mol (1837.3443 without restraints) Performing minimization step: 2926. Total energy = 1837.2758 kcal/mol (1837.2667 without restraints) Performing minimization step: 2927. Total energy = 1837.1983 kcal/mol (1837.1892 without restraints) Performing minimization step: 2928. Total energy = 1837.1210 kcal/mol (1837.1119 without restraints) Performing minimization step: 2929. Total energy = 1837.0435 kcal/mol (1837.0343 without restraints) Performing minimization step: 2930. Total energy = 1836.9658 kcal/mol (1836.9567 without restraints) Performing minimization step: 2931. Total energy = 1836.8888 kcal/mol (1836.8796 without restraints) Performing minimization step: 2932. Total energy = 1836.8112 kcal/mol (1836.8020 without restraints) Performing minimization step: 2933. Total energy = 1836.7339 kcal/mol (1836.7247 without restraints) Performing minimization step: 2934. Total energy = 1836.6564 kcal/mol (1836.6472 without restraints) Performing minimization step: 2935. Total energy = 1836.5794 kcal/mol (1836.5703 without restraints) Performing minimization step: 2936. Total energy = 1836.5020 kcal/mol (1836.4928 without restraints) Performing minimization step: 2937. Total energy = 1836.4245 kcal/mol (1836.4154 without restraints) Performing minimization step: 2938. Total energy = 1836.3471 kcal/mol (1836.3380 without restraints) Performing minimization step: 2939. Total energy = 1836.2698 kcal/mol (1836.2606 without restraints) Performing minimization step: 2940. Total energy = 1836.1923 kcal/mol (1836.1832 without restraints) Performing minimization step: 2941. Total energy = 1836.1150 kcal/mol (1836.1058 without restraints) Performing minimization step: 2942. Total energy = 1836.0380 kcal/mol (1836.0289 without restraints) Performing minimization step: 2943. Total energy = 1835.9607 kcal/mol (1835.9516 without restraints) Performing minimization step: 2944. Total energy = 1835.8832 kcal/mol (1835.8741 without restraints) Performing minimization step: 2945. Total energy = 1835.8059 kcal/mol (1835.7968 without restraints) Performing minimization step: 2946. Total energy = 1835.7289 kcal/mol (1835.7197 without restraints) Performing minimization step: 2947. Total energy = 1835.6514 kcal/mol (1835.6423 without restraints) Performing minimization step: 2948. Total energy = 1835.5742 kcal/mol (1835.5650 without restraints) Performing minimization step: 2949. Total energy = 1835.4969 kcal/mol (1835.4878 without restraints) Performing minimization step: 2950. Total energy = 1835.4197 kcal/mol (1835.4106 without restraints) Performing minimization step: 2951. Total energy = 1835.3425 kcal/mol (1835.3334 without restraints) Performing minimization step: 2952. Total energy = 1835.2651 kcal/mol (1835.2560 without restraints) Performing minimization step: 2953. Total energy = 1835.1880 kcal/mol (1835.1788 without restraints) Performing minimization step: 2954. Total energy = 1835.1107 kcal/mol (1835.1016 without restraints) Performing minimization step: 2955. Total energy = 1835.0336 kcal/mol (1835.0245 without restraints) Performing minimization step: 2956. Total energy = 1834.9563 kcal/mol (1834.9471 without restraints) Performing minimization step: 2957. Total energy = 1834.8791 kcal/mol (1834.8700 without restraints) Performing minimization step: 2958. Total energy = 1834.8016 kcal/mol (1834.7925 without restraints) Performing minimization step: 2959. Total energy = 1834.7250 kcal/mol (1834.7159 without restraints) Performing minimization step: 2960. Total energy = 1834.6477 kcal/mol (1834.6386 without restraints) Performing minimization step: 2961. Total energy = 1834.5707 kcal/mol (1834.5616 without restraints) Performing minimization step: 2962. Total energy = 1834.4938 kcal/mol (1834.4846 without restraints) Performing minimization step: 2963. Total energy = 1834.4164 kcal/mol (1834.4073 without restraints) Performing minimization step: 2964. Total energy = 1834.3395 kcal/mol (1834.3305 without restraints) Performing minimization step: 2965. Total energy = 1834.2626 kcal/mol (1834.2535 without restraints) Performing minimization step: 2966. Total energy = 1834.1856 kcal/mol (1834.1765 without restraints) Performing minimization step: 2967. Total energy = 1834.1086 kcal/mol (1834.0995 without restraints) Performing minimization step: 2968. Total energy = 1834.0315 kcal/mol (1834.0224 without restraints) Performing minimization step: 2969. Total energy = 1833.9545 kcal/mol (1833.9455 without restraints) Performing minimization step: 2970. Total energy = 1833.8774 kcal/mol (1833.8683 without restraints) Performing minimization step: 2971. Total energy = 1833.8003 kcal/mol (1833.7912 without restraints) Performing minimization step: 2972. Total energy = 1833.7234 kcal/mol (1833.7144 without restraints) Performing minimization step: 2973. Total energy = 1833.6466 kcal/mol (1833.6375 without restraints) Performing minimization step: 2974. Total energy = 1833.5700 kcal/mol (1833.5609 without restraints) Performing minimization step: 2975. Total energy = 1833.4932 kcal/mol (1833.4842 without restraints) Performing minimization step: 2976. Total energy = 1833.4165 kcal/mol (1833.4074 without restraints) Performing minimization step: 2977. Total energy = 1833.3399 kcal/mol (1833.3308 without restraints) Performing minimization step: 2978. Total energy = 1833.2631 kcal/mol (1833.2540 without restraints) Performing minimization step: 2979. Total energy = 1833.1863 kcal/mol (1833.1773 without restraints) Performing minimization step: 2980. Total energy = 1833.1096 kcal/mol (1833.1005 without restraints) Performing minimization step: 2981. Total energy = 1833.0328 kcal/mol (1833.0238 without restraints) Performing minimization step: 2982. Total energy = 1832.9560 kcal/mol (1832.9469 without restraints) Performing minimization step: 2983. Total energy = 1832.8792 kcal/mol (1832.8702 without restraints) Performing minimization step: 2984. Total energy = 1832.8025 kcal/mol (1832.7935 without restraints) Performing minimization step: 2985. Total energy = 1832.7258 kcal/mol (1832.7168 without restraints) Performing minimization step: 2986. Total energy = 1832.6492 kcal/mol (1832.6402 without restraints) Performing minimization step: 2987. Total energy = 1832.5726 kcal/mol (1832.5635 without restraints) Performing minimization step: 2988. Total energy = 1832.4960 kcal/mol (1832.4870 without restraints) Performing minimization step: 2989. Total energy = 1832.4194 kcal/mol (1832.4104 without restraints) Performing minimization step: 2990. Total energy = 1832.3429 kcal/mol (1832.3338 without restraints) Performing minimization step: 2991. Total energy = 1832.2667 kcal/mol (1832.2577 without restraints) Performing minimization step: 2992. Total energy = 1832.1902 kcal/mol (1832.1811 without restraints) Performing minimization step: 2993. Total energy = 1832.1136 kcal/mol (1832.1046 without restraints) Performing minimization step: 2994. Total energy = 1832.0371 kcal/mol (1832.0281 without restraints) Performing minimization step: 2995. Total energy = 1831.9606 kcal/mol (1831.9516 without restraints) Performing minimization step: 2996. Total energy = 1831.8846 kcal/mol (1831.8756 without restraints) Performing minimization step: 2997. Total energy = 1831.8081 kcal/mol (1831.7991 without restraints) Performing minimization step: 2998. Total energy = 1831.7317 kcal/mol (1831.7226 without restraints) Performing minimization step: 2999. Total energy = 1831.6552 kcal/mol (1831.6462 without restraints) Performing minimization step: 3000. Total energy = 1831.5787 kcal/mol (1831.5696 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e90c65df/tmp/ENST00000666628_refx/ENST00000666628_refx.pdb ...Done. Performing minimization step: 3001. Total energy = 1831.5022 kcal/mol (1831.4932 without restraints) Performing minimization step: 3002. Total energy = 1831.4259 kcal/mol (1831.4168 without restraints) Performing minimization step: 3003. Total energy = 1831.3495 kcal/mol (1831.3405 without restraints) Performing minimization step: 3004. Total energy = 1831.2732 kcal/mol (1831.2642 without restraints) Performing minimization step: 3005. Total energy = 1831.1969 kcal/mol (1831.1879 without restraints) Performing minimization step: 3006. Total energy = 1831.1206 kcal/mol (1831.1115 without restraints) Performing minimization step: 3007. Total energy = 1831.0445 kcal/mol (1831.0355 without restraints) Performing minimization step: 3008. Total energy = 1830.9682 kcal/mol (1830.9592 without restraints) Performing minimization step: 3009. Total energy = 1830.8922 kcal/mol (1830.8832 without restraints) Performing minimization step: 3010. Total energy = 1830.8160 kcal/mol (1830.8070 without restraints) Performing minimization step: 3011. Total energy = 1830.7397 kcal/mol (1830.7307 without restraints) Performing minimization step: 3012. Total energy = 1830.6633 kcal/mol (1830.6543 without restraints) Performing minimization step: 3013. Total energy = 1830.5871 kcal/mol (1830.5781 without restraints) Performing minimization step: 3014. Total energy = 1830.5107 kcal/mol (1830.5017 without restraints) Performing minimization step: 3015. Total energy = 1830.4346 kcal/mol (1830.4256 without restraints) Performing minimization step: 3016. Total energy = 1830.3584 kcal/mol (1830.3493 without restraints) Performing minimization step: 3017. Total energy = 1830.2824 kcal/mol (1830.2734 without restraints) Performing minimization step: 3018. Total energy = 1830.2061 kcal/mol (1830.1971 without restraints) Performing minimization step: 3019. Total energy = 1830.1300 kcal/mol (1830.1211 without restraints) Performing minimization step: 3020. Total energy = 1830.0539 kcal/mol (1830.0450 without restraints) Performing minimization step: 3021. Total energy = 1829.9779 kcal/mol (1829.9689 without restraints) Performing minimization step: 3022. Total energy = 1829.9016 kcal/mol (1829.8927 without restraints) Performing minimization step: 3023. Total energy = 1829.8257 kcal/mol (1829.8167 without restraints) Performing minimization step: 3024. Total energy = 1829.7497 kcal/mol (1829.7407 without restraints) Performing minimization step: 3025. Total energy = 1829.6738 kcal/mol (1829.6648 without restraints) Performing minimization step: 3026. Total energy = 1829.5978 kcal/mol (1829.5888 without restraints) Performing minimization step: 3027. Total energy = 1829.5219 kcal/mol (1829.5129 without restraints) Performing minimization step: 3028. Total energy = 1829.4460 kcal/mol (1829.4371 without restraints) Performing minimization step: 3029. Total energy = 1829.3701 kcal/mol (1829.3612 without restraints) Performing minimization step: 3030. Total energy = 1829.2943 kcal/mol (1829.2853 without restraints) Performing minimization step: 3031. Total energy = 1829.2184 kcal/mol (1829.2095 without restraints) Performing minimization step: 3032. Total energy = 1829.1426 kcal/mol (1829.1336 without restraints) Performing minimization step: 3033. Total energy = 1829.0668 kcal/mol (1829.0579 without restraints) Performing minimization step: 3034. Total energy = 1828.9914 kcal/mol (1828.9825 without restraints) Performing minimization step: 3035. Total energy = 1828.9156 kcal/mol (1828.9067 without restraints) Performing minimization step: 3036. Total energy = 1828.8399 kcal/mol (1828.8309 without restraints) Performing minimization step: 3037. Total energy = 1828.7641 kcal/mol (1828.7552 without restraints) Performing minimization step: 3038. Total energy = 1828.6884 kcal/mol (1828.6795 without restraints) Performing minimization step: 3039. Total energy = 1828.6127 kcal/mol (1828.6038 without restraints) Performing minimization step: 3040. Total energy = 1828.5371 kcal/mol (1828.5281 without restraints) Performing minimization step: 3041. Total energy = 1828.4614 kcal/mol (1828.4525 without restraints) Performing minimization step: 3042. Total energy = 1828.3858 kcal/mol (1828.3769 without restraints) Performing minimization step: 3043. Total energy = 1828.3102 kcal/mol (1828.3012 without restraints) Performing minimization step: 3044. Total energy = 1828.2346 kcal/mol (1828.2256 without restraints) Performing minimization step: 3045. Total energy = 1828.1590 kcal/mol (1828.1501 without restraints) Performing minimization step: 3046. Total energy = 1828.0835 kcal/mol (1828.0746 without restraints) Performing minimization step: 3047. Total energy = 1828.0079 kcal/mol (1827.9990 without restraints) Performing minimization step: 3048. Total energy = 1827.9324 kcal/mol (1827.9235 without restraints) Performing minimization step: 3049. Total energy = 1827.8570 kcal/mol (1827.8480 without restraints) Performing minimization step: 3050. Total energy = 1827.7813 kcal/mol (1827.7724 without restraints) Performing minimization step: 3051. Total energy = 1827.7058 kcal/mol (1827.6969 without restraints) Performing minimization step: 3052. Total energy = 1827.6305 kcal/mol (1827.6217 without restraints) Performing minimization step: 3053. Total energy = 1827.5552 kcal/mol (1827.5463 without restraints) Performing minimization step: 3054. Total energy = 1827.4798 kcal/mol (1827.4709 without restraints) Performing minimization step: 3055. Total energy = 1827.4045 kcal/mol (1827.3956 without restraints) Performing minimization step: 3056. Total energy = 1827.3291 kcal/mol (1827.3202 without restraints) Performing minimization step: 3057. Total energy = 1827.2538 kcal/mol (1827.2449 without restraints) Performing minimization step: 3058. Total energy = 1827.1783 kcal/mol (1827.1694 without restraints) Performing minimization step: 3059. Total energy = 1827.1033 kcal/mol (1827.0944 without restraints) Performing minimization step: 3060. Total energy = 1827.0280 kcal/mol (1827.0191 without restraints) Performing minimization step: 3061. Total energy = 1826.9528 kcal/mol (1826.9439 without restraints) Performing minimization step: 3062. Total energy = 1826.8775 kcal/mol (1826.8685 without restraints) Performing minimization step: 3063. Total energy = 1826.8022 kcal/mol (1826.7933 without restraints) Performing minimization step: 3064. Total energy = 1826.7268 kcal/mol (1826.7179 without restraints) Performing minimization step: 3065. Total energy = 1826.6517 kcal/mol (1826.6429 without restraints) Performing minimization step: 3066. Total energy = 1826.5769 kcal/mol (1826.5680 without restraints) Performing minimization step: 3067. Total energy = 1826.5017 kcal/mol (1826.4927 without restraints) Performing minimization step: 3068. Total energy = 1826.4267 kcal/mol (1826.4178 without restraints) Performing minimization step: 3069. Total energy = 1826.3514 kcal/mol (1826.3425 without restraints) Performing minimization step: 3070. Total energy = 1826.2763 kcal/mol (1826.2675 without restraints) Performing minimization step: 3071. Total energy = 1826.2013 kcal/mol (1826.1924 without restraints) Performing minimization step: 3072. Total energy = 1826.1265 kcal/mol (1826.1177 without restraints) Performing minimization step: 3073. Total energy = 1826.0515 kcal/mol (1826.0427 without restraints) Performing minimization step: 3074. Total energy = 1825.9771 kcal/mol (1825.9682 without restraints) Performing minimization step: 3075. Total energy = 1825.9019 kcal/mol (1825.8931 without restraints) Performing minimization step: 3076. Total energy = 1825.8272 kcal/mol (1825.8184 without restraints) Performing minimization step: 3077. Total energy = 1825.7526 kcal/mol (1825.7437 without restraints) Performing minimization step: 3078. Total energy = 1825.6777 kcal/mol (1825.6689 without restraints) Performing minimization step: 3079. Total energy = 1825.6029 kcal/mol (1825.5941 without restraints) Performing minimization step: 3080. Total energy = 1825.5282 kcal/mol (1825.5194 without restraints) Performing minimization step: 3081. Total energy = 1825.4535 kcal/mol (1825.4447 without restraints) Performing minimization step: 3082. Total energy = 1825.3787 kcal/mol (1825.3698 without restraints) Performing minimization step: 3083. Total energy = 1825.3039 kcal/mol (1825.2951 without restraints) Performing minimization step: 3084. Total energy = 1825.2291 kcal/mol (1825.2202 without restraints) Performing minimization step: 3085. Total energy = 1825.1540 kcal/mol (1825.1451 without restraints) Performing minimization step: 3086. Total energy = 1825.0792 kcal/mol (1825.0704 without restraints) Performing minimization step: 3087. Total energy = 1825.0046 kcal/mol (1824.9958 without restraints) Performing minimization step: 3088. Total energy = 1824.9300 kcal/mol (1824.9212 without restraints) Performing minimization step: 3089. Total energy = 1824.8554 kcal/mol (1824.8466 without restraints) Performing minimization step: 3090. Total energy = 1824.7808 kcal/mol (1824.7720 without restraints) Performing minimization step: 3091. Total energy = 1824.7063 kcal/mol (1824.6975 without restraints) Performing minimization step: 3092. Total energy = 1824.6318 kcal/mol (1824.6230 without restraints) Performing minimization step: 3093. Total energy = 1824.5577 kcal/mol (1824.5489 without restraints) Performing minimization step: 3094. Total energy = 1824.4834 kcal/mol (1824.4746 without restraints) Performing minimization step: 3095. Total energy = 1824.4089 kcal/mol (1824.4001 without restraints) Performing minimization step: 3096. Total energy = 1824.3345 kcal/mol (1824.3257 without restraints) Performing minimization step: 3097. Total energy = 1824.2603 kcal/mol (1824.2515 without restraints) Performing minimization step: 3098. Total energy = 1824.1857 kcal/mol (1824.1769 without restraints) Performing minimization step: 3099. Total energy = 1824.1116 kcal/mol (1824.1028 without restraints) Performing minimization step: 3100. Total energy = 1824.0375 kcal/mol (1824.0287 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e90c65df/tmp/ENST00000666628_refx/ENST00000666628_refx.pdb ...Done. Performing minimization step: 3101. Total energy = 1823.9634 kcal/mol (1823.9546 without restraints) Performing minimization step: 3102. Total energy = 1823.8890 kcal/mol (1823.8802 without restraints) Performing minimization step: 3103. Total energy = 1823.8147 kcal/mol (1823.8059 without restraints) Performing minimization step: 3104. Total energy = 1823.7407 kcal/mol (1823.7319 without restraints) Performing minimization step: 3105. Total energy = 1823.6665 kcal/mol (1823.6577 without restraints) Performing minimization step: 3106. Total energy = 1823.5923 kcal/mol (1823.5836 without restraints) Performing minimization step: 3107. Total energy = 1823.5182 kcal/mol (1823.5095 without restraints) Performing minimization step: 3108. Total energy = 1823.4442 kcal/mol (1823.4354 without restraints) Performing minimization step: 3109. Total energy = 1823.3698 kcal/mol (1823.3611 without restraints) Performing minimization step: 3110. Total energy = 1823.2955 kcal/mol (1823.2866 without restraints) Performing minimization step: 3111. Total energy = 1823.2213 kcal/mol (1823.2126 without restraints) Performing minimization step: 3112. Total energy = 1823.1471 kcal/mol (1823.1384 without restraints) Performing minimization step: 3113. Total energy = 1823.0734 kcal/mol (1823.0646 without restraints) Performing minimization step: 3114. Total energy = 1822.9993 kcal/mol (1822.9905 without restraints) Performing minimization step: 3115. Total energy = 1822.9253 kcal/mol (1822.9166 without restraints) Performing minimization step: 3116. Total energy = 1822.8514 kcal/mol (1822.8427 without restraints) Performing minimization step: 3117. Total energy = 1822.7775 kcal/mol (1822.7687 without restraints) Performing minimization step: 3118. Total energy = 1822.7036 kcal/mol (1822.6948 without restraints) Performing minimization step: 3119. Total energy = 1822.6299 kcal/mol (1822.6212 without restraints) Performing minimization step: 3120. Total energy = 1822.5562 kcal/mol (1822.5474 without restraints) Performing minimization step: 3121. Total energy = 1822.4826 kcal/mol (1822.4739 without restraints) Performing minimization step: 3122. Total energy = 1822.4086 kcal/mol (1822.3997 without restraints) Performing minimization step: 3123. Total energy = 1822.3347 kcal/mol (1822.3260 without restraints) Performing minimization step: 3124. Total energy = 1822.2612 kcal/mol (1822.2525 without restraints) Performing minimization step: 3125. Total energy = 1822.1876 kcal/mol (1822.1789 without restraints) Performing minimization step: 3126. Total energy = 1822.1140 kcal/mol (1822.1053 without restraints) Performing minimization step: 3127. Total energy = 1822.0402 kcal/mol (1822.0315 without restraints) Performing minimization step: 3128. Total energy = 1821.9667 kcal/mol (1821.9580 without restraints) Performing minimization step: 3129. Total energy = 1821.8932 kcal/mol (1821.8845 without restraints) Performing minimization step: 3130. Total energy = 1821.8198 kcal/mol (1821.8112 without restraints) Performing minimization step: 3131. Total energy = 1821.7464 kcal/mol (1821.7377 without restraints) Performing minimization step: 3132. Total energy = 1821.6729 kcal/mol (1821.6643 without restraints) Performing minimization step: 3133. Total energy = 1821.5993 kcal/mol (1821.5907 without restraints) Performing minimization step: 3134. Total energy = 1821.5260 kcal/mol (1821.5173 without restraints) Performing minimization step: 3135. Total energy = 1821.4526 kcal/mol (1821.4440 without restraints) Performing minimization step: 3136. Total energy = 1821.3795 kcal/mol (1821.3709 without restraints) Performing minimization step: 3137. Total energy = 1821.3060 kcal/mol (1821.2974 without restraints) Performing minimization step: 3138. Total energy = 1821.2328 kcal/mol (1821.2241 without restraints) Performing minimization step: 3139. Total energy = 1821.1595 kcal/mol (1821.1509 without restraints) Performing minimization step: 3140. Total energy = 1821.0866 kcal/mol (1821.0779 without restraints) Performing minimization step: 3141. Total energy = 1821.0134 kcal/mol (1821.0048 without restraints) Performing minimization step: 3142. Total energy = 1820.9403 kcal/mol (1820.9316 without restraints) Performing minimization step: 3143. Total energy = 1820.8669 kcal/mol (1820.8583 without restraints) Performing minimization step: 3144. Total energy = 1820.7938 kcal/mol (1820.7852 without restraints) Performing minimization step: 3145. Total energy = 1820.7208 kcal/mol (1820.7122 without restraints) Performing minimization step: 3146. Total energy = 1820.6480 kcal/mol (1820.6394 without restraints) Performing minimization step: 3147. Total energy = 1820.5750 kcal/mol (1820.5664 without restraints) Performing minimization step: 3148. Total energy = 1820.5021 kcal/mol (1820.4935 without restraints) Performing minimization step: 3149. Total energy = 1820.4296 kcal/mol (1820.4211 without restraints) Performing minimization step: 3150. Total energy = 1820.3570 kcal/mol (1820.3484 without restraints) Performing minimization step: 3151. Total energy = 1820.2842 kcal/mol (1820.2756 without restraints) Performing minimization step: 3152. Total energy = 1820.2115 kcal/mol (1820.2029 without restraints) Performing minimization step: 3153. Total energy = 1820.1388 kcal/mol (1820.1302 without restraints) Performing minimization step: 3154. Total energy = 1820.0661 kcal/mol (1820.0575 without restraints) Performing minimization step: 3155. Total energy = 1819.9933 kcal/mol (1819.9848 without restraints) Performing minimization step: 3156. Total energy = 1819.9207 kcal/mol (1819.9121 without restraints) Performing minimization step: 3157. Total energy = 1819.8480 kcal/mol (1819.8394 without restraints) Performing minimization step: 3158. Total energy = 1819.7754 kcal/mol (1819.7669 without restraints) Performing minimization step: 3159. Total energy = 1819.7028 kcal/mol (1819.6943 without restraints) Performing minimization step: 3160. Total energy = 1819.6303 kcal/mol (1819.6217 without restraints) Performing minimization step: 3161. Total energy = 1819.5575 kcal/mol (1819.5490 without restraints) Performing minimization step: 3162. Total energy = 1819.4850 kcal/mol (1819.4763 without restraints) Performing minimization step: 3163. Total energy = 1819.4124 kcal/mol (1819.4039 without restraints) Performing minimization step: 3164. Total energy = 1819.3400 kcal/mol (1819.3315 without restraints) Performing minimization step: 3165. Total energy = 1819.2679 kcal/mol (1819.2593 without restraints) Performing minimization step: 3166. Total energy = 1819.1951 kcal/mol (1819.1867 without restraints) Performing minimization step: 3167. Total energy = 1819.1229 kcal/mol (1819.1144 without restraints) Performing minimization step: 3168. Total energy = 1819.0506 kcal/mol (1819.0421 without restraints) Performing minimization step: 3169. Total energy = 1818.9786 kcal/mol (1818.9701 without restraints) Performing minimization step: 3170. Total energy = 1818.9063 kcal/mol (1818.8978 without restraints) Performing minimization step: 3171. Total energy = 1818.8342 kcal/mol (1818.8256 without restraints) Performing minimization step: 3172. Total energy = 1818.7618 kcal/mol (1818.7533 without restraints) Performing minimization step: 3173. Total energy = 1818.6895 kcal/mol (1818.6810 without restraints) Performing minimization step: 3174. Total energy = 1818.6172 kcal/mol (1818.6087 without restraints) Performing minimization step: 3175. Total energy = 1818.5452 kcal/mol (1818.5367 without restraints) Performing minimization step: 3176. Total energy = 1818.4731 kcal/mol (1818.4645 without restraints) Performing minimization step: 3177. Total energy = 1818.4012 kcal/mol (1818.3927 without restraints) Performing minimization step: 3178. Total energy = 1818.3292 kcal/mol (1818.3208 without restraints) Performing minimization step: 3179. Total energy = 1818.2573 kcal/mol (1818.2489 without restraints) Performing minimization step: 3180. Total energy = 1818.1855 kcal/mol (1818.1770 without restraints) Performing minimization step: 3181. Total energy = 1818.1135 kcal/mol (1818.1051 without restraints) Performing minimization step: 3182. Total energy = 1818.0418 kcal/mol (1818.0334 without restraints) Performing minimization step: 3183. Total energy = 1817.9700 kcal/mol (1817.9616 without restraints) Performing minimization step: 3184. Total energy = 1817.8983 kcal/mol (1817.8899 without restraints) Performing minimization step: 3185. Total energy = 1817.8266 kcal/mol (1817.8182 without restraints) Performing minimization step: 3186. Total energy = 1817.7552 kcal/mol (1817.7468 without restraints) Performing minimization step: 3187. Total energy = 1817.6836 kcal/mol (1817.6751 without restraints) Performing minimization step: 3188. Total energy = 1817.6120 kcal/mol (1817.6035 without restraints) Performing minimization step: 3189. Total energy = 1817.5404 kcal/mol (1817.5320 without restraints) Performing minimization step: 3190. Total energy = 1817.4690 kcal/mol (1817.4605 without restraints) Performing minimization step: 3191. Total energy = 1817.3975 kcal/mol (1817.3891 without restraints) Performing minimization step: 3192. Total energy = 1817.3261 kcal/mol (1817.3177 without restraints) Performing minimization step: 3193. Total energy = 1817.2547 kcal/mol (1817.2463 without restraints) Performing minimization step: 3194. Total energy = 1817.1834 kcal/mol (1817.1750 without restraints) Performing minimization step: 3195. Total energy = 1817.1120 kcal/mol (1817.1035 without restraints) Performing minimization step: 3196. Total energy = 1817.0406 kcal/mol (1817.0322 without restraints) Performing minimization step: 3197. Total energy = 1816.9694 kcal/mol (1816.9610 without restraints) Performing minimization step: 3198. Total energy = 1816.8982 kcal/mol (1816.8898 without restraints) Performing minimization step: 3199. Total energy = 1816.8272 kcal/mol (1816.8188 without restraints) Performing minimization step: 3200. Total energy = 1816.7561 kcal/mol (1816.7477 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e90c65df/tmp/ENST00000666628_refx/ENST00000666628_refx.pdb ...Done. Performing minimization step: 3201. Total energy = 1816.6850 kcal/mol (1816.6766 without restraints) Performing minimization step: 3202. Total energy = 1816.6140 kcal/mol (1816.6056 without restraints) Performing minimization step: 3203. Total energy = 1816.5430 kcal/mol (1816.5346 without restraints) Performing minimization step: 3204. Total energy = 1816.4720 kcal/mol (1816.4636 without restraints) Performing minimization step: 3205. Total energy = 1816.4012 kcal/mol (1816.3929 without restraints) Performing minimization step: 3206. Total energy = 1816.3303 kcal/mol (1816.3220 without restraints) Performing minimization step: 3207. Total energy = 1816.2597 kcal/mol (1816.2514 without restraints) Performing minimization step: 3208. Total energy = 1816.1886 kcal/mol (1816.1803 without restraints) Performing minimization step: 3209. Total energy = 1816.1183 kcal/mol (1816.1099 without restraints) Performing minimization step: 3210. Total energy = 1816.0479 kcal/mol (1816.0395 without restraints) Performing minimization step: 3211. Total energy = 1815.9772 kcal/mol (1815.9688 without restraints) Performing minimization step: 3212. Total energy = 1815.9064 kcal/mol (1815.8980 without restraints) Performing minimization step: 3213. Total energy = 1815.8355 kcal/mol (1815.8272 without restraints) Performing minimization step: 3214. Total energy = 1815.7649 kcal/mol (1815.7566 without restraints) Performing minimization step: 3215. Total energy = 1815.6944 kcal/mol (1815.6861 without restraints) Performing minimization step: 3216. Total energy = 1815.6239 kcal/mol (1815.6156 without restraints) Performing minimization step: 3217. Total energy = 1815.5532 kcal/mol (1815.5449 without restraints) Performing minimization step: 3218. Total energy = 1815.4824 kcal/mol (1815.4741 without restraints) Performing minimization step: 3219. Total energy = 1815.4118 kcal/mol (1815.4034 without restraints) Performing minimization step: 3220. Total energy = 1815.3413 kcal/mol (1815.3330 without restraints) Performing minimization step: 3221. Total energy = 1815.2706 kcal/mol (1815.2622 without restraints) Performing minimization step: 3222. Total energy = 1815.2003 kcal/mol (1815.1920 without restraints) Performing minimization step: 3223. Total energy = 1815.1301 kcal/mol (1815.1218 without restraints) Performing minimization step: 3224. Total energy = 1815.0598 kcal/mol (1815.0515 without restraints) Performing minimization step: 3225. Total energy = 1814.9896 kcal/mol (1814.9813 without restraints) Performing minimization step: 3226. Total energy = 1814.9195 kcal/mol (1814.9113 without restraints) Performing minimization step: 3227. Total energy = 1814.8495 kcal/mol (1814.8412 without restraints) Performing minimization step: 3228. Total energy = 1814.7795 kcal/mol (1814.7712 without restraints) Performing minimization step: 3229. Total energy = 1814.7095 kcal/mol (1814.7012 without restraints) Performing minimization step: 3230. Total energy = 1814.6396 kcal/mol (1814.6313 without restraints) Performing minimization step: 3231. Total energy = 1814.5700 kcal/mol (1814.5618 without restraints) Performing minimization step: 3232. Total energy = 1814.5001 kcal/mol (1814.4917 without restraints) Performing minimization step: 3233. Total energy = 1814.4302 kcal/mol (1814.4220 without restraints) Performing minimization step: 3234. Total energy = 1814.3604 kcal/mol (1814.3522 without restraints) Performing minimization step: 3235. Total energy = 1814.2905 kcal/mol (1814.2822 without restraints) Performing minimization step: 3236. Total energy = 1814.2206 kcal/mol (1814.2124 without restraints) Performing minimization step: 3237. Total energy = 1814.1510 kcal/mol (1814.1427 without restraints) Performing minimization step: 3238. Total energy = 1814.0813 kcal/mol (1814.0731 without restraints) Performing minimization step: 3239. Total energy = 1814.0120 kcal/mol (1814.0038 without restraints) Performing minimization step: 3240. Total energy = 1813.9424 kcal/mol (1813.9342 without restraints) Performing minimization step: 3241. Total energy = 1813.8730 kcal/mol (1813.8648 without restraints) Performing minimization step: 3242. Total energy = 1813.8033 kcal/mol (1813.7951 without restraints) Performing minimization step: 3243. Total energy = 1813.7339 kcal/mol (1813.7257 without restraints) Performing minimization step: 3244. Total energy = 1813.6646 kcal/mol (1813.6564 without restraints) Performing minimization step: 3245. Total energy = 1813.5955 kcal/mol (1813.5874 without restraints) Performing minimization step: 3246. Total energy = 1813.5263 kcal/mol (1813.5181 without restraints) Performing minimization step: 3247. Total energy = 1813.4571 kcal/mol (1813.4489 without restraints) Performing minimization step: 3248. Total energy = 1813.3878 kcal/mol (1813.3797 without restraints) Performing minimization step: 3249. Total energy = 1813.3186 kcal/mol (1813.3104 without restraints) Performing minimization step: 3250. Total energy = 1813.2493 kcal/mol (1813.2412 without restraints) Performing minimization step: 3251. Total energy = 1813.1809 kcal/mol (1813.1727 without restraints) Performing minimization step: 3252. Total energy = 1813.1119 kcal/mol (1813.1037 without restraints) Performing minimization step: 3253. Total energy = 1813.0429 kcal/mol (1813.0348 without restraints) Performing minimization step: 3254. Total energy = 1812.9740 kcal/mol (1812.9659 without restraints) Performing minimization step: 3255. Total energy = 1812.9051 kcal/mol (1812.8970 without restraints) Performing minimization step: 3256. Total energy = 1812.8363 kcal/mol (1812.8282 without restraints) Performing minimization step: 3257. Total energy = 1812.7675 kcal/mol (1812.7594 without restraints) Performing minimization step: 3258. Total energy = 1812.6990 kcal/mol (1812.6909 without restraints) Performing minimization step: 3259. Total energy = 1812.6300 kcal/mol (1812.6219 without restraints) Performing minimization step: 3260. Total energy = 1812.5615 kcal/mol (1812.5536 without restraints) Performing minimization step: 3261. Total energy = 1812.4929 kcal/mol (1812.4848 without restraints) Performing minimization step: 3262. Total energy = 1812.4247 kcal/mol (1812.4166 without restraints) Performing minimization step: 3263. Total energy = 1812.3562 kcal/mol (1812.3481 without restraints) Performing minimization step: 3264. Total energy = 1812.2873 kcal/mol (1812.2792 without restraints) Performing minimization step: 3265. Total energy = 1812.2186 kcal/mol (1812.2106 without restraints) Performing minimization step: 3266. Total energy = 1812.1498 kcal/mol (1812.1418 without restraints) Performing minimization step: 3267. Total energy = 1812.0815 kcal/mol (1812.0734 without restraints) Performing minimization step: 3268. Total energy = 1812.0132 kcal/mol (1812.0051 without restraints) Performing minimization step: 3269. Total energy = 1811.9449 kcal/mol (1811.9369 without restraints) Performing minimization step: 3270. Total energy = 1811.8767 kcal/mol (1811.8686 without restraints) Performing minimization step: 3271. Total energy = 1811.8085 kcal/mol (1811.8005 without restraints) Performing minimization step: 3272. Total energy = 1811.7401 kcal/mol (1811.7321 without restraints) Performing minimization step: 3273. Total energy = 1811.6720 kcal/mol (1811.6640 without restraints) Performing minimization step: 3274. Total energy = 1811.6043 kcal/mol (1811.5962 without restraints) Performing minimization step: 3275. Total energy = 1811.5363 kcal/mol (1811.5282 without restraints) Performing minimization step: 3276. Total energy = 1811.4685 kcal/mol (1811.4605 without restraints) Performing minimization step: 3277. Total energy = 1811.4008 kcal/mol (1811.3930 without restraints) Performing minimization step: 3278. Total energy = 1811.3331 kcal/mol (1811.3251 without restraints) Performing minimization step: 3279. Total energy = 1811.2653 kcal/mol (1811.2573 without restraints) Performing minimization step: 3280. Total energy = 1811.1975 kcal/mol (1811.1895 without restraints) Performing minimization step: 3281. Total energy = 1811.1298 kcal/mol (1811.1218 without restraints) Performing minimization step: 3282. Total energy = 1811.0621 kcal/mol (1811.0541 without restraints) Performing minimization step: 3283. Total energy = 1810.9945 kcal/mol (1810.9863 without restraints) Performing minimization step: 3284. Total energy = 1810.9265 kcal/mol (1810.9185 without restraints) Performing minimization step: 3285. Total energy = 1810.8588 kcal/mol (1810.8508 without restraints) Performing minimization step: 3286. Total energy = 1810.7913 kcal/mol (1810.7833 without restraints) Performing minimization step: 3287. Total energy = 1810.7239 kcal/mol (1810.7160 without restraints) Performing minimization step: 3288. Total energy = 1810.6565 kcal/mol (1810.6486 without restraints) Performing minimization step: 3289. Total energy = 1810.5892 kcal/mol (1810.5812 without restraints) Performing minimization step: 3290. Total energy = 1810.5219 kcal/mol (1810.5139 without restraints) Performing minimization step: 3291. Total energy = 1810.4546 kcal/mol (1810.4467 without restraints) Performing minimization step: 3292. Total energy = 1810.3874 kcal/mol (1810.3794 without restraints) Performing minimization step: 3293. Total energy = 1810.3200 kcal/mol (1810.3121 without restraints) Performing minimization step: 3294. Total energy = 1810.2528 kcal/mol (1810.2449 without restraints) Performing minimization step: 3295. Total energy = 1810.1856 kcal/mol (1810.1777 without restraints) Performing minimization step: 3296. Total energy = 1810.1186 kcal/mol (1810.1106 without restraints) Performing minimization step: 3297. Total energy = 1810.0520 kcal/mol (1810.0441 without restraints) Performing minimization step: 3298. Total energy = 1809.9848 kcal/mol (1809.9769 without restraints) Performing minimization step: 3299. Total energy = 1809.9179 kcal/mol (1809.9100 without restraints) Performing minimization step: 3300. Total energy = 1809.8503 kcal/mol (1809.8424 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e90c65df/tmp/ENST00000666628_refx/ENST00000666628_refx.pdb ...Done. Performing minimization step: 3301. Total energy = 1809.7839 kcal/mol (1809.7761 without restraints) Performing minimization step: 3302. Total energy = 1809.7172 kcal/mol (1809.7093 without restraints) Performing minimization step: 3303. Total energy = 1809.6505 kcal/mol (1809.6426 without restraints) Performing minimization step: 3304. Total energy = 1809.5838 kcal/mol (1809.5760 without restraints) Performing minimization step: 3305. Total energy = 1809.5172 kcal/mol (1809.5093 without restraints) Performing minimization step: 3306. Total energy = 1809.4506 kcal/mol (1809.4427 without restraints) Performing minimization step: 3307. Total energy = 1809.3840 kcal/mol (1809.3762 without restraints) Performing minimization step: 3308. Total energy = 1809.3178 kcal/mol (1809.3099 without restraints) Performing minimization step: 3309. Total energy = 1809.2513 kcal/mol (1809.2435 without restraints) Performing minimization step: 3310. Total energy = 1809.1851 kcal/mol (1809.1773 without restraints) Performing minimization step: 3311. Total energy = 1809.1185 kcal/mol (1809.1107 without restraints) Performing minimization step: 3312. Total energy = 1809.0522 kcal/mol (1809.0444 without restraints) Performing minimization step: 3313. Total energy = 1808.9859 kcal/mol (1808.9781 without restraints) Performing minimization step: 3314. Total energy = 1808.9194 kcal/mol (1808.9116 without restraints) Performing minimization step: 3315. Total energy = 1808.8532 kcal/mol (1808.8454 without restraints) Performing minimization step: 3316. Total energy = 1808.7871 kcal/mol (1808.7792 without restraints) Performing minimization step: 3317. Total energy = 1808.7210 kcal/mol (1808.7132 without restraints) Performing minimization step: 3318. Total energy = 1808.6549 kcal/mol (1808.6471 without restraints) Performing minimization step: 3319. Total energy = 1808.5891 kcal/mol (1808.5813 without restraints) Performing minimization step: 3320. Total energy = 1808.5232 kcal/mol (1808.5154 without restraints) Performing minimization step: 3321. Total energy = 1808.4573 kcal/mol (1808.4495 without restraints) Performing minimization step: 3322. Total energy = 1808.3914 kcal/mol (1808.3837 without restraints) Performing minimization step: 3323. Total energy = 1808.3256 kcal/mol (1808.3178 without restraints) Performing minimization step: 3324. Total energy = 1808.2598 kcal/mol (1808.2520 without restraints) Performing minimization step: 3325. Total energy = 1808.1941 kcal/mol (1808.1864 without restraints) Performing minimization step: 3326. Total energy = 1808.1284 kcal/mol (1808.1207 without restraints) Performing minimization step: 3327. Total energy = 1808.0626 kcal/mol (1808.0548 without restraints) Performing minimization step: 3328. Total energy = 1807.9969 kcal/mol (1807.9892 without restraints) Performing minimization step: 3329. Total energy = 1807.9314 kcal/mol (1807.9237 without restraints) Performing minimization step: 3330. Total energy = 1807.8659 kcal/mol (1807.8582 without restraints) Performing minimization step: 3331. Total energy = 1807.8009 kcal/mol (1807.7931 without restraints) Performing minimization step: 3332. Total energy = 1807.7356 kcal/mol (1807.7279 without restraints) Performing minimization step: 3333. Total energy = 1807.6701 kcal/mol (1807.6624 without restraints) Performing minimization step: 3334. Total energy = 1807.6048 kcal/mol (1807.5971 without restraints) Performing minimization step: 3335. Total energy = 1807.5393 kcal/mol (1807.5316 without restraints) Performing minimization step: 3336. Total energy = 1807.4741 kcal/mol (1807.4664 without restraints) Performing minimization step: 3337. Total energy = 1807.4090 kcal/mol (1807.4013 without restraints) Performing minimization step: 3338. Total energy = 1807.3438 kcal/mol (1807.3361 without restraints) Performing minimization step: 3339. Total energy = 1807.2789 kcal/mol (1807.2715 without restraints) Performing minimization step: 3340. Total energy = 1807.2144 kcal/mol (1807.2067 without restraints) Performing minimization step: 3341. Total energy = 1807.1493 kcal/mol (1807.1417 without restraints) Performing minimization step: 3342. Total energy = 1807.0844 kcal/mol (1807.0767 without restraints) Performing minimization step: 3343. Total energy = 1807.0192 kcal/mol (1807.0115 without restraints) Performing minimization step: 3344. Total energy = 1806.9543 kcal/mol (1806.9467 without restraints) Performing minimization step: 3345. Total energy = 1806.8895 kcal/mol (1806.8819 without restraints) Performing minimization step: 3346. Total energy = 1806.8248 kcal/mol (1806.8171 without restraints) Performing minimization step: 3347. Total energy = 1806.7600 kcal/mol (1806.7524 without restraints) Performing minimization step: 3348. Total energy = 1806.6953 kcal/mol (1806.6877 without restraints) Performing minimization step: 3349. Total energy = 1806.6307 kcal/mol (1806.6231 without restraints) Performing minimization step: 3350. Total energy = 1806.5661 kcal/mol (1806.5585 without restraints) Performing minimization step: 3351. Total energy = 1806.5016 kcal/mol (1806.4940 without restraints) Performing minimization step: 3352. Total energy = 1806.4371 kcal/mol (1806.4295 without restraints) Performing minimization step: 3353. Total energy = 1806.3726 kcal/mol (1806.3650 without restraints) Performing minimization step: 3354. Total energy = 1806.3082 kcal/mol (1806.3006 without restraints) Performing minimization step: 3355. Total energy = 1806.2438 kcal/mol (1806.2362 without restraints) Performing minimization step: 3356. Total energy = 1806.1795 kcal/mol (1806.1719 without restraints) Performing minimization step: 3357. Total energy = 1806.1152 kcal/mol (1806.1076 without restraints) Performing minimization step: 3358. Total energy = 1806.0509 kcal/mol (1806.0434 without restraints) Performing minimization step: 3359. Total energy = 1805.9867 kcal/mol (1805.9790 without restraints) Performing minimization step: 3360. Total energy = 1805.9230 kcal/mol (1805.9154 without restraints) Performing minimization step: 3361. Total energy = 1805.8589 kcal/mol (1805.8513 without restraints) Performing minimization step: 3362. Total energy = 1805.7944 kcal/mol (1805.7869 without restraints) Performing minimization step: 3363. Total energy = 1805.7305 kcal/mol (1805.7231 without restraints) Performing minimization step: 3364. Total energy = 1805.6666 kcal/mol (1805.6591 without restraints) Performing minimization step: 3365. Total energy = 1805.6028 kcal/mol (1805.5952 without restraints) Performing minimization step: 3366. Total energy = 1805.5389 kcal/mol (1805.5314 without restraints) Performing minimization step: 3367. Total energy = 1805.4751 kcal/mol (1805.4675 without restraints) Performing minimization step: 3368. Total energy = 1805.4113 kcal/mol (1805.4037 without restraints) Performing minimization step: 3369. Total energy = 1805.3475 kcal/mol (1805.3400 without restraints) Performing minimization step: 3370. Total energy = 1805.2838 kcal/mol (1805.2763 without restraints) Performing minimization step: 3371. Total energy = 1805.2201 kcal/mol (1805.2126 without restraints) Performing minimization step: 3372. Total energy = 1805.1565 kcal/mol (1805.1490 without restraints) Performing minimization step: 3373. Total energy = 1805.0930 kcal/mol (1805.0855 without restraints) Performing minimization step: 3374. Total energy = 1805.0296 kcal/mol (1805.0221 without restraints) Performing minimization step: 3375. Total energy = 1804.9661 kcal/mol (1804.9586 without restraints) Performing minimization step: 3376. Total energy = 1804.9027 kcal/mol (1804.8952 without restraints) Performing minimization step: 3377. Total energy = 1804.8393 kcal/mol (1804.8318 without restraints) Performing minimization step: 3378. Total energy = 1804.7759 kcal/mol (1804.7685 without restraints) Performing minimization step: 3379. Total energy = 1804.7128 kcal/mol (1804.7054 without restraints) Performing minimization step: 3380. Total energy = 1804.6498 kcal/mol (1804.6424 without restraints) Performing minimization step: 3381. Total energy = 1804.5866 kcal/mol (1804.5792 without restraints) Performing minimization step: 3382. Total energy = 1804.5235 kcal/mol (1804.5161 without restraints) Performing minimization step: 3383. Total energy = 1804.4607 kcal/mol (1804.4535 without restraints) Performing minimization step: 3384. Total energy = 1804.3978 kcal/mol (1804.3904 without restraints) Performing minimization step: 3385. Total energy = 1804.3348 kcal/mol (1804.3274 without restraints) Performing minimization step: 3386. Total energy = 1804.2716 kcal/mol (1804.2642 without restraints) Performing minimization step: 3387. Total energy = 1804.2087 kcal/mol (1804.2013 without restraints) Performing minimization step: 3388. Total energy = 1804.1458 kcal/mol (1804.1384 without restraints) Performing minimization step: 3389. Total energy = 1804.0832 kcal/mol (1804.0757 without restraints) Performing minimization step: 3390. Total energy = 1804.0203 kcal/mol (1804.0129 without restraints) Performing minimization step: 3391. Total energy = 1803.9573 kcal/mol (1803.9499 without restraints) Performing minimization step: 3392. Total energy = 1803.8946 kcal/mol (1803.8872 without restraints) Performing minimization step: 3393. Total energy = 1803.8319 kcal/mol (1803.8245 without restraints) Performing minimization step: 3394. Total energy = 1803.7688 kcal/mol (1803.7614 without restraints) Performing minimization step: 3395. Total energy = 1803.7062 kcal/mol (1803.6988 without restraints) Performing minimization step: 3396. Total energy = 1803.6437 kcal/mol (1803.6363 without restraints) Performing minimization step: 3397. Total energy = 1803.5812 kcal/mol (1803.5738 without restraints) Performing minimization step: 3398. Total energy = 1803.5188 kcal/mol (1803.5114 without restraints) Performing minimization step: 3399. Total energy = 1803.4566 kcal/mol (1803.4492 without restraints) Performing minimization step: 3400. Total energy = 1803.3942 kcal/mol (1803.3869 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e90c65df/tmp/ENST00000666628_refx/ENST00000666628_refx.pdb ...Done. Performing minimization step: 3401. Total energy = 1803.3318 kcal/mol (1803.3245 without restraints) Performing minimization step: 3402. Total energy = 1803.2696 kcal/mol (1803.2622 without restraints) Performing minimization step: 3403. Total energy = 1803.2074 kcal/mol (1803.2001 without restraints) Performing minimization step: 3404. Total energy = 1803.1452 kcal/mol (1803.1379 without restraints) Performing minimization step: 3405. Total energy = 1803.0833 kcal/mol (1803.0760 without restraints) Performing minimization step: 3406. Total energy = 1803.0212 kcal/mol (1803.0139 without restraints) Performing minimization step: 3407. Total energy = 1802.9592 kcal/mol (1802.9520 without restraints) Performing minimization step: 3408. Total energy = 1802.8973 kcal/mol (1802.8900 without restraints) Performing minimization step: 3409. Total energy = 1802.8353 kcal/mol (1802.8280 without restraints) Performing minimization step: 3410. Total energy = 1802.7734 kcal/mol (1802.7661 without restraints) Performing minimization step: 3411. Total energy = 1802.7113 kcal/mol (1802.7040 without restraints) Performing minimization step: 3412. Total energy = 1802.6494 kcal/mol (1802.6421 without restraints) Performing minimization step: 3413. Total energy = 1802.5876 kcal/mol (1802.5803 without restraints) Performing minimization step: 3414. Total energy = 1802.5258 kcal/mol (1802.5185 without restraints) Performing minimization step: 3415. Total energy = 1802.4641 kcal/mol (1802.4568 without restraints) Performing minimization step: 3416. Total energy = 1802.4026 kcal/mol (1802.3955 without restraints) Performing minimization step: 3417. Total energy = 1802.3411 kcal/mol (1802.3338 without restraints) Performing minimization step: 3418. Total energy = 1802.2797 kcal/mol (1802.2724 without restraints) Performing minimization step: 3419. Total energy = 1802.2181 kcal/mol (1802.2108 without restraints) Performing minimization step: 3420. Total energy = 1802.1567 kcal/mol (1802.1495 without restraints) Performing minimization step: 3421. Total energy = 1802.0954 kcal/mol (1802.0881 without restraints) Performing minimization step: 3422. Total energy = 1802.0337 kcal/mol (1802.0265 without restraints) Performing minimization step: 3423. Total energy = 1801.9723 kcal/mol (1801.9651 without restraints) Performing minimization step: 3424. Total energy = 1801.9111 kcal/mol (1801.9039 without restraints) Performing minimization step: 3425. Total energy = 1801.8500 kcal/mol (1801.8429 without restraints) Performing minimization step: 3426. Total energy = 1801.7888 kcal/mol (1801.7816 without restraints) Performing minimization step: 3427. Total energy = 1801.7272 kcal/mol (1801.7200 without restraints) Performing minimization step: 3428. Total energy = 1801.6658 kcal/mol (1801.6586 without restraints) Performing minimization step: 3429. Total energy = 1801.6047 kcal/mol (1801.5975 without restraints) Performing minimization step: 3430. Total energy = 1801.5436 kcal/mol (1801.5364 without restraints) Performing minimization step: 3431. Total energy = 1801.4826 kcal/mol (1801.4754 without restraints) Performing minimization step: 3432. Total energy = 1801.4216 kcal/mol (1801.4144 without restraints) Performing minimization step: 3433. Total energy = 1801.3606 kcal/mol (1801.3534 without restraints) Performing minimization step: 3434. Total energy = 1801.2997 kcal/mol (1801.2925 without restraints) Performing minimization step: 3435. Total energy = 1801.2389 kcal/mol (1801.2317 without restraints) Performing minimization step: 3436. Total energy = 1801.1784 kcal/mol (1801.1712 without restraints) Performing minimization step: 3437. Total energy = 1801.1176 kcal/mol (1801.1104 without restraints) Performing minimization step: 3438. Total energy = 1801.0568 kcal/mol (1801.0496 without restraints) Performing minimization step: 3439. Total energy = 1800.9961 kcal/mol (1800.9889 without restraints) Performing minimization step: 3440. Total energy = 1800.9354 kcal/mol (1800.9282 without restraints) Performing minimization step: 3441. Total energy = 1800.8747 kcal/mol (1800.8676 without restraints) Performing minimization step: 3442. Total energy = 1800.8141 kcal/mol (1800.8070 without restraints) Performing minimization step: 3443. Total energy = 1800.7536 kcal/mol (1800.7464 without restraints) Performing minimization step: 3444. Total energy = 1800.6935 kcal/mol (1800.6864 without restraints) Performing minimization step: 3445. Total energy = 1800.6333 kcal/mol (1800.6261 without restraints) Performing minimization step: 3446. Total energy = 1800.5728 kcal/mol (1800.5657 without restraints) Performing minimization step: 3447. Total energy = 1800.5124 kcal/mol (1800.5053 without restraints) Performing minimization step: 3448. Total energy = 1800.4520 kcal/mol (1800.4449 without restraints) Performing minimization step: 3449. Total energy = 1800.3919 kcal/mol (1800.3848 without restraints) Performing minimization step: 3450. Total energy = 1800.3316 kcal/mol (1800.3245 without restraints) Performing minimization step: 3451. Total energy = 1800.2715 kcal/mol (1800.2644 without restraints) Performing minimization step: 3452. Total energy = 1800.2112 kcal/mol (1800.2040 without restraints) Performing minimization step: 3453. Total energy = 1800.1510 kcal/mol (1800.1439 without restraints) Performing minimization step: 3454. Total energy = 1800.0911 kcal/mol (1800.0840 without restraints) Performing minimization step: 3455. Total energy = 1800.0310 kcal/mol (1800.0239 without restraints) Performing minimization step: 3456. Total energy = 1799.9708 kcal/mol (1799.9638 without restraints) Performing minimization step: 3457. Total energy = 1799.9109 kcal/mol (1799.9038 without restraints) Performing minimization step: 3458. Total energy = 1799.8509 kcal/mol (1799.8437 without restraints) Performing minimization step: 3459. Total energy = 1799.7909 kcal/mol (1799.7838 without restraints) Performing minimization step: 3460. Total energy = 1799.7310 kcal/mol (1799.7239 without restraints) Performing minimization step: 3461. Total energy = 1799.6713 kcal/mol (1799.6643 without restraints) Performing minimization step: 3462. Total energy = 1799.6115 kcal/mol (1799.6044 without restraints) Performing minimization step: 3463. Total energy = 1799.5517 kcal/mol (1799.5446 without restraints) Performing minimization step: 3464. Total energy = 1799.4920 kcal/mol (1799.4849 without restraints) Performing minimization step: 3465. Total energy = 1799.4321 kcal/mol (1799.4250 without restraints) Performing minimization step: 3466. Total energy = 1799.3724 kcal/mol (1799.3653 without restraints) Performing minimization step: 3467. Total energy = 1799.3127 kcal/mol (1799.3057 without restraints) Performing minimization step: 3468. Total energy = 1799.2529 kcal/mol (1799.2459 without restraints) Performing minimization step: 3469. Total energy = 1799.1934 kcal/mol (1799.1864 without restraints) Performing minimization step: 3470. Total energy = 1799.1339 kcal/mol (1799.1269 without restraints) Performing minimization step: 3471. Total energy = 1799.0745 kcal/mol (1799.0674 without restraints) Performing minimization step: 3472. Total energy = 1799.0150 kcal/mol (1799.0080 without restraints) Performing minimization step: 3473. Total energy = 1798.9558 kcal/mol (1798.9488 without restraints) Performing minimization step: 3474. Total energy = 1798.8965 kcal/mol (1798.8895 without restraints) Performing minimization step: 3475. Total energy = 1798.8374 kcal/mol (1798.8304 without restraints) Performing minimization step: 3476. Total energy = 1798.7780 kcal/mol (1798.7710 without restraints) Performing minimization step: 3477. Total energy = 1798.7187 kcal/mol (1798.7118 without restraints) Performing minimization step: 3478. Total energy = 1798.6593 kcal/mol (1798.6524 without restraints) Performing minimization step: 3479. Total energy = 1798.6002 kcal/mol (1798.5932 without restraints) Performing minimization step: 3480. Total energy = 1798.5411 kcal/mol (1798.5341 without restraints) Performing minimization step: 3481. Total energy = 1798.4820 kcal/mol (1798.4750 without restraints) Performing minimization step: 3482. Total energy = 1798.4235 kcal/mol (1798.4165 without restraints) Performing minimization step: 3483. Total energy = 1798.3645 kcal/mol (1798.3576 without restraints) Performing minimization step: 3484. Total energy = 1798.3053 kcal/mol (1798.2984 without restraints) Performing minimization step: 3485. Total energy = 1798.2464 kcal/mol (1798.2394 without restraints) Performing minimization step: 3486. Total energy = 1798.1875 kcal/mol (1798.1805 without restraints) Performing minimization step: 3487. Total energy = 1798.1286 kcal/mol (1798.1217 without restraints) Performing minimization step: 3488. Total energy = 1798.0698 kcal/mol (1798.0629 without restraints) Performing minimization step: 3489. Total energy = 1798.0110 kcal/mol (1798.0041 without restraints) Performing minimization step: 3490. Total energy = 1797.9523 kcal/mol (1797.9453 without restraints) Performing minimization step: 3491. Total energy = 1797.8936 kcal/mol (1797.8866 without restraints) Performing minimization step: 3492. Total energy = 1797.8349 kcal/mol (1797.8280 without restraints) Performing minimization step: 3493. Total energy = 1797.7763 kcal/mol (1797.7693 without restraints) Performing minimization step: 3494. Total energy = 1797.7178 kcal/mol (1797.7109 without restraints) Performing minimization step: 3495. Total energy = 1797.6593 kcal/mol (1797.6524 without restraints) Performing minimization step: 3496. Total energy = 1797.6007 kcal/mol (1797.5938 without restraints) Performing minimization step: 3497. Total energy = 1797.5424 kcal/mol (1797.5355 without restraints) Performing minimization step: 3498. Total energy = 1797.4838 kcal/mol (1797.4769 without restraints) Performing minimization step: 3499. Total energy = 1797.4254 kcal/mol (1797.4185 without restraints) Performing minimization step: 3500. Total energy = 1797.3670 kcal/mol (1797.3601 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e90c65df/tmp/ENST00000666628_refx/ENST00000666628_refx.pdb ...Done. Performing minimization step: 3501. Total energy = 1797.3087 kcal/mol (1797.3018 without restraints) Performing minimization step: 3502. Total energy = 1797.2503 kcal/mol (1797.2435 without restraints) Performing minimization step: 3503. Total energy = 1797.1921 kcal/mol (1797.1852 without restraints) Performing minimization step: 3504. Total energy = 1797.1338 kcal/mol (1797.1270 without restraints) Performing minimization step: 3505. Total energy = 1797.0757 kcal/mol (1797.0688 without restraints) Performing minimization step: 3506. Total energy = 1797.0175 kcal/mol (1797.0106 without restraints) Performing minimization step: 3507. Total energy = 1796.9594 kcal/mol (1796.9526 without restraints) Performing minimization step: 3508. Total energy = 1796.9013 kcal/mol (1796.8945 without restraints) Performing minimization step: 3509. Total energy = 1796.8433 kcal/mol (1796.8364 without restraints) Performing minimization step: 3510. Total energy = 1796.7852 kcal/mol (1796.7784 without restraints) Performing minimization step: 3511. Total energy = 1796.7273 kcal/mol (1796.7204 without restraints) Performing minimization step: 3512. Total energy = 1796.6693 kcal/mol (1796.6625 without restraints) Performing minimization step: 3513. Total energy = 1796.6110 kcal/mol (1796.6041 without restraints) Performing minimization step: 3514. Total energy = 1796.5531 kcal/mol (1796.5463 without restraints) Performing minimization step: 3515. Total energy = 1796.4953 kcal/mol (1796.4885 without restraints) Performing minimization step: 3516. Total energy = 1796.4372 kcal/mol (1796.4304 without restraints) Performing minimization step: 3517. Total energy = 1796.3796 kcal/mol (1796.3728 without restraints) Performing minimization step: 3518. Total energy = 1796.3221 kcal/mol (1796.3152 without restraints) Performing minimization step: 3519. Total energy = 1796.2643 kcal/mol (1796.2575 without restraints) Performing minimization step: 3520. Total energy = 1796.2063 kcal/mol (1796.1995 without restraints) Performing minimization step: 3521. Total energy = 1796.1484 kcal/mol (1796.1416 without restraints) Performing minimization step: 3522. Total energy = 1796.0908 kcal/mol (1796.0840 without restraints) Performing minimization step: 3523. Total energy = 1796.0332 kcal/mol (1796.0264 without restraints) Performing minimization step: 3524. Total energy = 1795.9757 kcal/mol (1795.9689 without restraints) Performing minimization step: 3525. Total energy = 1795.9175 kcal/mol (1795.9107 without restraints) Performing minimization step: 3526. Total energy = 1795.8596 kcal/mol (1795.8528 without restraints) Performing minimization step: 3527. Total energy = 1795.8022 kcal/mol (1795.7954 without restraints) Performing minimization step: 3528. Total energy = 1795.7448 kcal/mol (1795.7380 without restraints) Performing minimization step: 3529. Total energy = 1795.6874 kcal/mol (1795.6806 without restraints) Performing minimization step: 3530. Total energy = 1795.6303 kcal/mol (1795.6236 without restraints) Performing minimization step: 3531. Total energy = 1795.5728 kcal/mol (1795.5660 without restraints) Performing minimization step: 3532. Total energy = 1795.5158 kcal/mol (1795.5090 without restraints) Performing minimization step: 3533. Total energy = 1795.4588 kcal/mol (1795.4520 without restraints) Performing minimization step: 3534. Total energy = 1795.4016 kcal/mol (1795.3949 without restraints) Performing minimization step: 3535. Total energy = 1795.3445 kcal/mol (1795.3377 without restraints) Performing minimization step: 3536. Total energy = 1795.2875 kcal/mol (1795.2807 without restraints) Performing minimization step: 3537. Total energy = 1795.2305 kcal/mol (1795.2239 without restraints) Performing minimization step: 3538. Total energy = 1795.1736 kcal/mol (1795.1668 without restraints) Performing minimization step: 3539. Total energy = 1795.1165 kcal/mol (1795.1098 without restraints) Performing minimization step: 3540. Total energy = 1795.0595 kcal/mol (1795.0528 without restraints) Performing minimization step: 3541. Total energy = 1795.0023 kcal/mol (1794.9955 without restraints) Performing minimization step: 3542. Total energy = 1794.9453 kcal/mol (1794.9386 without restraints) Performing minimization step: 3543. Total energy = 1794.8884 kcal/mol (1794.8817 without restraints) Performing minimization step: 3544. Total energy = 1794.8316 kcal/mol (1794.8248 without restraints) Performing minimization step: 3545. Total energy = 1794.7747 kcal/mol (1794.7680 without restraints) Performing minimization step: 3546. Total energy = 1794.7182 kcal/mol (1794.7115 without restraints) Performing minimization step: 3547. Total energy = 1794.6614 kcal/mol (1794.6547 without restraints) Performing minimization step: 3548. Total energy = 1794.6053 kcal/mol (1794.5987 without restraints) Performing minimization step: 3549. Total energy = 1794.5487 kcal/mol (1794.5420 without restraints) Performing minimization step: 3550. Total energy = 1794.4923 kcal/mol (1794.4856 without restraints) Performing minimization step: 3551. Total energy = 1794.4359 kcal/mol (1794.4292 without restraints) Performing minimization step: 3552. Total energy = 1794.3793 kcal/mol (1794.3726 without restraints) Performing minimization step: 3553. Total energy = 1794.3229 kcal/mol (1794.3162 without restraints) Performing minimization step: 3554. Total energy = 1794.2663 kcal/mol (1794.2597 without restraints) Performing minimization step: 3555. Total energy = 1794.2097 kcal/mol (1794.2029 without restraints) Performing minimization step: 3556. Total energy = 1794.1533 kcal/mol (1794.1467 without restraints) Performing minimization step: 3557. Total energy = 1794.0969 kcal/mol (1794.0902 without restraints) Performing minimization step: 3558. Total energy = 1794.0406 kcal/mol (1794.0339 without restraints) Performing minimization step: 3559. Total energy = 1793.9841 kcal/mol (1793.9773 without restraints) Performing minimization step: 3560. Total energy = 1793.9278 kcal/mol (1793.9212 without restraints) Performing minimization step: 3561. Total energy = 1793.8715 kcal/mol (1793.8648 without restraints) Performing minimization step: 3562. Total energy = 1793.8154 kcal/mol (1793.8088 without restraints) Performing minimization step: 3563. Total energy = 1793.7592 kcal/mol (1793.7526 without restraints) Performing minimization step: 3564. Total energy = 1793.7032 kcal/mol (1793.6966 without restraints) Performing minimization step: 3565. Total energy = 1793.6468 kcal/mol (1793.6402 without restraints) Performing minimization step: 3566. Total energy = 1793.5906 kcal/mol (1793.5840 without restraints) Performing minimization step: 3567. Total energy = 1793.5345 kcal/mol (1793.5279 without restraints) Performing minimization step: 3568. Total energy = 1793.4784 kcal/mol (1793.4718 without restraints) Performing minimization step: 3569. Total energy = 1793.4223 kcal/mol (1793.4157 without restraints) Performing minimization step: 3570. Total energy = 1793.3662 kcal/mol (1793.3596 without restraints) Performing minimization step: 3571. Total energy = 1793.3105 kcal/mol (1793.3041 without restraints) Performing minimization step: 3572. Total energy = 1793.2547 kcal/mol (1793.2481 without restraints) Performing minimization step: 3573. Total energy = 1793.1989 kcal/mol (1793.1923 without restraints) Performing minimization step: 3574. Total energy = 1793.1430 kcal/mol (1793.1364 without restraints) Performing minimization step: 3575. Total energy = 1793.0869 kcal/mol (1793.0803 without restraints) Performing minimization step: 3576. Total energy = 1793.0306 kcal/mol (1793.0240 without restraints) Performing minimization step: 3577. Total energy = 1792.9747 kcal/mol (1792.9681 without restraints) Performing minimization step: 3578. Total energy = 1792.9192 kcal/mol (1792.9126 without restraints) Performing minimization step: 3579. Total energy = 1792.8634 kcal/mol (1792.8568 without restraints) Performing minimization step: 3580. Total energy = 1792.8077 kcal/mol (1792.8011 without restraints) Performing minimization step: 3581. Total energy = 1792.7522 kcal/mol (1792.7456 without restraints) Performing minimization step: 3582. Total energy = 1792.6965 kcal/mol (1792.6899 without restraints) Performing minimization step: 3583. Total energy = 1792.6408 kcal/mol (1792.6343 without restraints) Performing minimization step: 3584. Total energy = 1792.5852 kcal/mol (1792.5787 without restraints) Performing minimization step: 3585. Total energy = 1792.5296 kcal/mol (1792.5230 without restraints) Performing minimization step: 3586. Total energy = 1792.4741 kcal/mol (1792.4675 without restraints) Performing minimization step: 3587. Total energy = 1792.4185 kcal/mol (1792.4120 without restraints) Performing minimization step: 3588. Total energy = 1792.3632 kcal/mol (1792.3567 without restraints) Performing minimization step: 3589. Total energy = 1792.3078 kcal/mol (1792.3013 without restraints) Performing minimization step: 3590. Total energy = 1792.2524 kcal/mol (1792.2459 without restraints) Performing minimization step: 3591. Total energy = 1792.1972 kcal/mol (1792.1906 without restraints) Performing minimization step: 3592. Total energy = 1792.1418 kcal/mol (1792.1353 without restraints) Performing minimization step: 3593. Total energy = 1792.0866 kcal/mol (1792.0801 without restraints) Performing minimization step: 3594. Total energy = 1792.0313 kcal/mol (1792.0248 without restraints) Performing minimization step: 3595. Total energy = 1791.9760 kcal/mol (1791.9695 without restraints) Performing minimization step: 3596. Total energy = 1791.9210 kcal/mol (1791.9145 without restraints) Performing minimization step: 3597. Total energy = 1791.8655 kcal/mol (1791.8590 without restraints) Performing minimization step: 3598. Total energy = 1791.8103 kcal/mol (1791.8038 without restraints) Performing minimization step: 3599. Total energy = 1791.7553 kcal/mol (1791.7489 without restraints) Performing minimization step: 3600. Total energy = 1791.7005 kcal/mol (1791.6940 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e90c65df/tmp/ENST00000666628_refx/ENST00000666628_refx.pdb ...Done. Performing minimization step: 3601. Total energy = 1791.6454 kcal/mol (1791.6389 without restraints) Performing minimization step: 3602. Total energy = 1791.5903 kcal/mol (1791.5838 without restraints) Performing minimization step: 3603. Total energy = 1791.5352 kcal/mol (1791.5287 without restraints) Performing minimization step: 3604. Total energy = 1791.4803 kcal/mol (1791.4738 without restraints) Performing minimization step: 3605. Total energy = 1791.4253 kcal/mol (1791.4188 without restraints) Performing minimization step: 3606. Total energy = 1791.3703 kcal/mol (1791.3638 without restraints) Performing minimization step: 3607. Total energy = 1791.3153 kcal/mol (1791.3088 without restraints) Performing minimization step: 3608. Total energy = 1791.2602 kcal/mol (1791.2537 without restraints) Performing minimization step: 3609. Total energy = 1791.2053 kcal/mol (1791.1988 without restraints) Performing minimization step: 3610. Total energy = 1791.1506 kcal/mol (1791.1443 without restraints) Performing minimization step: 3611. Total energy = 1791.0960 kcal/mol (1791.0895 without restraints) Performing minimization step: 3612. Total energy = 1791.0412 kcal/mol (1791.0347 without restraints) Performing minimization step: 3613. Total energy = 1790.9865 kcal/mol (1790.9800 without restraints) Performing minimization step: 3614. Total energy = 1790.9315 kcal/mol (1790.9251 without restraints) Performing minimization step: 3615. Total energy = 1790.8768 kcal/mol (1790.8704 without restraints) Performing minimization step: 3616. Total energy = 1790.8222 kcal/mol (1790.8157 without restraints) Performing minimization step: 3617. Total energy = 1790.7676 kcal/mol (1790.7611 without restraints) Performing minimization step: 3618. Total energy = 1790.7129 kcal/mol (1790.7065 without restraints) Performing minimization step: 3619. Total energy = 1790.6584 kcal/mol (1790.6519 without restraints) Performing minimization step: 3620. Total energy = 1790.6038 kcal/mol (1790.5974 without restraints) Performing minimization step: 3621. Total energy = 1790.5493 kcal/mol (1790.5428 without restraints) Performing minimization step: 3622. Total energy = 1790.4947 kcal/mol (1790.4883 without restraints) Performing minimization step: 3623. Total energy = 1790.4402 kcal/mol (1790.4338 without restraints) Performing minimization step: 3624. Total energy = 1790.3856 kcal/mol (1790.3792 without restraints) Performing minimization step: 3625. Total energy = 1790.3312 kcal/mol (1790.3247 without restraints) Performing minimization step: 3626. Total energy = 1790.2768 kcal/mol (1790.2704 without restraints) Performing minimization step: 3627. Total energy = 1790.2224 kcal/mol (1790.2160 without restraints) Performing minimization step: 3628. Total energy = 1790.1680 kcal/mol (1790.1616 without restraints) Performing minimization step: 3629. Total energy = 1790.1137 kcal/mol (1790.1073 without restraints) Performing minimization step: 3630. Total energy = 1790.0594 kcal/mol (1790.0530 without restraints) Performing minimization step: 3631. Total energy = 1790.0051 kcal/mol (1789.9987 without restraints) Performing minimization step: 3632. Total energy = 1789.9511 kcal/mol (1789.9447 without restraints) Performing minimization step: 3633. Total energy = 1789.8973 kcal/mol (1789.8909 without restraints) Performing minimization step: 3634. Total energy = 1789.8431 kcal/mol (1789.8367 without restraints) Performing minimization step: 3635. Total energy = 1789.7889 kcal/mol (1789.7825 without restraints) Performing minimization step: 3636. Total energy = 1789.7345 kcal/mol (1789.7281 without restraints) Performing minimization step: 3637. Total energy = 1789.6804 kcal/mol (1789.6740 without restraints) Performing minimization step: 3638. Total energy = 1789.6265 kcal/mol (1789.6201 without restraints) Performing minimization step: 3639. Total energy = 1789.5724 kcal/mol (1789.5660 without restraints) Performing minimization step: 3640. Total energy = 1789.5184 kcal/mol (1789.5120 without restraints) Performing minimization step: 3641. Total energy = 1789.4644 kcal/mol (1789.4580 without restraints) Performing minimization step: 3642. Total energy = 1789.4105 kcal/mol (1789.4043 without restraints) Performing minimization step: 3643. Total energy = 1789.3566 kcal/mol (1789.3503 without restraints) Performing minimization step: 3644. Total energy = 1789.3027 kcal/mol (1789.2963 without restraints) Performing minimization step: 3645. Total energy = 1789.2488 kcal/mol (1789.2424 without restraints) Performing minimization step: 3646. Total energy = 1789.1949 kcal/mol (1789.1885 without restraints) Performing minimization step: 3647. Total energy = 1789.1410 kcal/mol (1789.1346 without restraints) Performing minimization step: 3648. Total energy = 1789.0872 kcal/mol (1789.0808 without restraints) Performing minimization step: 3649. Total energy = 1789.0335 kcal/mol (1789.0272 without restraints) Performing minimization step: 3650. Total energy = 1788.9796 kcal/mol (1788.9732 without restraints) Performing minimization step: 3651. Total energy = 1788.9258 kcal/mol (1788.9195 without restraints) Performing minimization step: 3652. Total energy = 1788.8720 kcal/mol (1788.8657 without restraints) Performing minimization step: 3653. Total energy = 1788.8186 kcal/mol (1788.8122 without restraints) Performing minimization step: 3654. Total energy = 1788.7645 kcal/mol (1788.7581 without restraints) Performing minimization step: 3655. Total energy = 1788.7109 kcal/mol (1788.7047 without restraints) Performing minimization step: 3656. Total energy = 1788.6573 kcal/mol (1788.6509 without restraints) Performing minimization step: 3657. Total energy = 1788.6036 kcal/mol (1788.5973 without restraints) Performing minimization step: 3658. Total energy = 1788.5500 kcal/mol (1788.5437 without restraints) Performing minimization step: 3659. Total energy = 1788.4965 kcal/mol (1788.4901 without restraints) Performing minimization step: 3660. Total energy = 1788.4429 kcal/mol (1788.4366 without restraints) Performing minimization step: 3661. Total energy = 1788.3896 kcal/mol (1788.3833 without restraints) Performing minimization step: 3662. Total energy = 1788.3362 kcal/mol (1788.3299 without restraints) Performing minimization step: 3663. Total energy = 1788.2828 kcal/mol (1788.2767 without restraints) Performing minimization step: 3664. Total energy = 1788.2293 kcal/mol (1788.2228 without restraints) Performing minimization step: 3665. Total energy = 1788.1757 kcal/mol (1788.1693 without restraints) Performing minimization step: 3666. Total energy = 1788.1223 kcal/mol (1788.1160 without restraints) Performing minimization step: 3667. Total energy = 1788.0689 kcal/mol (1788.0626 without restraints) Performing minimization step: 3668. Total energy = 1788.0159 kcal/mol (1788.0098 without restraints) Performing minimization step: 3669. Total energy = 1787.9628 kcal/mol (1787.9566 without restraints) Performing minimization step: 3670. Total energy = 1787.9095 kcal/mol (1787.9033 without restraints) Performing minimization step: 3671. Total energy = 1787.8565 kcal/mol (1787.8502 without restraints) Performing minimization step: 3672. Total energy = 1787.8030 kcal/mol (1787.7967 without restraints) Performing minimization step: 3673. Total energy = 1787.7498 kcal/mol (1787.7435 without restraints) Performing minimization step: 3674. Total energy = 1787.6965 kcal/mol (1787.6903 without restraints) Performing minimization step: 3675. Total energy = 1787.6434 kcal/mol (1787.6371 without restraints) Performing minimization step: 3676. Total energy = 1787.5902 kcal/mol (1787.5840 without restraints) Performing minimization step: 3677. Total energy = 1787.5367 kcal/mol (1787.5304 without restraints) Performing minimization step: 3678. Total energy = 1787.4836 kcal/mol (1787.4774 without restraints) Performing minimization step: 3679. Total energy = 1787.4305 kcal/mol (1787.4242 without restraints) Performing minimization step: 3680. Total energy = 1787.3775 kcal/mol (1787.3712 without restraints) Performing minimization step: 3681. Total energy = 1787.3246 kcal/mol (1787.3184 without restraints) Performing minimization step: 3682. Total energy = 1787.2717 kcal/mol (1787.2654 without restraints) Performing minimization step: 3683. Total energy = 1787.2187 kcal/mol (1787.2124 without restraints) Performing minimization step: 3684. Total energy = 1787.1657 kcal/mol (1787.1595 without restraints) Performing minimization step: 3685. Total energy = 1787.1126 kcal/mol (1787.1063 without restraints) Performing minimization step: 3686. Total energy = 1787.0596 kcal/mol (1787.0534 without restraints) Performing minimization step: 3687. Total energy = 1787.0068 kcal/mol (1787.0005 without restraints) Performing minimization step: 3688. Total energy = 1786.9539 kcal/mol (1786.9477 without restraints) Performing minimization step: 3689. Total energy = 1786.9013 kcal/mol (1786.8951 without restraints) Performing minimization step: 3690. Total energy = 1786.8485 kcal/mol (1786.8422 without restraints) Performing minimization step: 3691. Total energy = 1786.7957 kcal/mol (1786.7895 without restraints) Performing minimization step: 3692. Total energy = 1786.7429 kcal/mol (1786.7367 without restraints) Performing minimization step: 3693. Total energy = 1786.6905 kcal/mol (1786.6842 without restraints) Performing minimization step: 3694. Total energy = 1786.6377 kcal/mol (1786.6314 without restraints) Performing minimization step: 3695. Total energy = 1786.5850 kcal/mol (1786.5787 without restraints) Performing minimization step: 3696. Total energy = 1786.5323 kcal/mol (1786.5261 without restraints) Performing minimization step: 3697. Total energy = 1786.4795 kcal/mol (1786.4733 without restraints) Performing minimization step: 3698. Total energy = 1786.4270 kcal/mol (1786.4208 without restraints) Performing minimization step: 3699. Total energy = 1786.3748 kcal/mol (1786.3686 without restraints) Performing minimization step: 3700. Total energy = 1786.3224 kcal/mol (1786.3162 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e90c65df/tmp/ENST00000666628_refx/ENST00000666628_refx.pdb ...Done. Performing minimization step: 3701. Total energy = 1786.2699 kcal/mol (1786.2637 without restraints) Performing minimization step: 3702. Total energy = 1786.2174 kcal/mol (1786.2112 without restraints) Performing minimization step: 3703. Total energy = 1786.1649 kcal/mol (1786.1587 without restraints) Performing minimization step: 3704. Total energy = 1786.1124 kcal/mol (1786.1062 without restraints) Performing minimization step: 3705. Total energy = 1786.0599 kcal/mol (1786.0537 without restraints) Performing minimization step: 3706. Total energy = 1786.0075 kcal/mol (1786.0013 without restraints) Performing minimization step: 3707. Total energy = 1785.9550 kcal/mol (1785.9488 without restraints) Performing minimization step: 3708. Total energy = 1785.9026 kcal/mol (1785.8964 without restraints) Performing minimization step: 3709. Total energy = 1785.8502 kcal/mol (1785.8440 without restraints) Performing minimization step: 3710. Total energy = 1785.7980 kcal/mol (1785.7918 without restraints) Performing minimization step: 3711. Total energy = 1785.7457 kcal/mol (1785.7395 without restraints) Performing minimization step: 3712. Total energy = 1785.6934 kcal/mol (1785.6872 without restraints) Performing minimization step: 3713. Total energy = 1785.6411 kcal/mol (1785.6349 without restraints) Performing minimization step: 3714. Total energy = 1785.5886 kcal/mol (1785.5825 without restraints) Performing minimization step: 3715. Total energy = 1785.5362 kcal/mol (1785.5300 without restraints) Performing minimization step: 3716. Total energy = 1785.4839 kcal/mol (1785.4778 without restraints) Performing minimization step: 3717. Total energy = 1785.4318 kcal/mol (1785.4256 without restraints) Performing minimization step: 3718. Total energy = 1785.3798 kcal/mol (1785.3736 without restraints) Performing minimization step: 3719. Total energy = 1785.3273 kcal/mol (1785.3211 without restraints) Performing minimization step: 3720. Total energy = 1785.2751 kcal/mol (1785.2690 without restraints) Performing minimization step: 3721. Total energy = 1785.2230 kcal/mol (1785.2169 without restraints) Performing minimization step: 3722. Total energy = 1785.1710 kcal/mol (1785.1648 without restraints) Performing minimization step: 3723. Total energy = 1785.1186 kcal/mol (1785.1125 without restraints) Performing minimization step: 3724. Total energy = 1785.0669 kcal/mol (1785.0609 without restraints) Performing minimization step: 3725. Total energy = 1785.0150 kcal/mol (1785.0089 without restraints) Performing minimization step: 3726. Total energy = 1784.9626 kcal/mol (1784.9565 without restraints) Performing minimization step: 3727. Total energy = 1784.9107 kcal/mol (1784.9045 without restraints) Performing minimization step: 3728. Total energy = 1784.8587 kcal/mol (1784.8526 without restraints) Performing minimization step: 3729. Total energy = 1784.8068 kcal/mol (1784.8006 without restraints) Performing minimization step: 3730. Total energy = 1784.7550 kcal/mol (1784.7489 without restraints) Performing minimization step: 3731. Total energy = 1784.7034 kcal/mol (1784.6972 without restraints) Performing minimization step: 3732. Total energy = 1784.6513 kcal/mol (1784.6452 without restraints) Performing minimization step: 3733. Total energy = 1784.5996 kcal/mol (1784.5935 without restraints) Performing minimization step: 3734. Total energy = 1784.5477 kcal/mol (1784.5416 without restraints) Performing minimization step: 3735. Total energy = 1784.4959 kcal/mol (1784.4898 without restraints) Performing minimization step: 3736. Total energy = 1784.4439 kcal/mol (1784.4378 without restraints) Performing minimization step: 3737. Total energy = 1784.3921 kcal/mol (1784.3860 without restraints) Performing minimization step: 3738. Total energy = 1784.3403 kcal/mol (1784.3342 without restraints) Performing minimization step: 3739. Total energy = 1784.2885 kcal/mol (1784.2824 without restraints) Performing minimization step: 3740. Total energy = 1784.2371 kcal/mol (1784.2310 without restraints) Performing minimization step: 3741. Total energy = 1784.1854 kcal/mol (1784.1793 without restraints) Performing minimization step: 3742. Total energy = 1784.1331 kcal/mol (1784.1270 without restraints) Performing minimization step: 3743. Total energy = 1784.0816 kcal/mol (1784.0755 without restraints) Performing minimization step: 3744. Total energy = 1784.0301 kcal/mol (1784.0241 without restraints) Performing minimization step: 3745. Total energy = 1783.9786 kcal/mol (1783.9725 without restraints) Performing minimization step: 3746. Total energy = 1783.9270 kcal/mol (1783.9209 without restraints) Performing minimization step: 3747. Total energy = 1783.8755 kcal/mol (1783.8694 without restraints) Performing minimization step: 3748. Total energy = 1783.8239 kcal/mol (1783.8178 without restraints) Performing minimization step: 3749. Total energy = 1783.7724 kcal/mol (1783.7663 without restraints) Performing minimization step: 3750. Total energy = 1783.7208 kcal/mol (1783.7146 without restraints) Performing minimization step: 3751. Total energy = 1783.6690 kcal/mol (1783.6629 without restraints) Performing minimization step: 3752. Total energy = 1783.6175 kcal/mol (1783.6115 without restraints) Performing minimization step: 3753. Total energy = 1783.5661 kcal/mol (1783.5600 without restraints) Performing minimization step: 3754. Total energy = 1783.5147 kcal/mol (1783.5086 without restraints) Performing minimization step: 3755. Total energy = 1783.4633 kcal/mol (1783.4572 without restraints) Performing minimization step: 3756. Total energy = 1783.4119 kcal/mol (1783.4058 without restraints) Performing minimization step: 3757. Total energy = 1783.3606 kcal/mol (1783.3545 without restraints) Performing minimization step: 3758. Total energy = 1783.3092 kcal/mol (1783.3032 without restraints) Performing minimization step: 3759. Total energy = 1783.2579 kcal/mol (1783.2519 without restraints) Performing minimization step: 3760. Total energy = 1783.2065 kcal/mol (1783.2004 without restraints) Performing minimization step: 3761. Total energy = 1783.1551 kcal/mol (1783.1490 without restraints) Performing minimization step: 3762. Total energy = 1783.1038 kcal/mol (1783.0978 without restraints) Performing minimization step: 3763. Total energy = 1783.0528 kcal/mol (1783.0468 without restraints) Performing minimization step: 3764. Total energy = 1783.0016 kcal/mol (1782.9955 without restraints) Performing minimization step: 3765. Total energy = 1782.9504 kcal/mol (1782.9444 without restraints) Performing minimization step: 3766. Total energy = 1782.8995 kcal/mol (1782.8934 without restraints) Performing minimization step: 3767. Total energy = 1782.8485 kcal/mol (1782.8425 without restraints) Performing minimization step: 3768. Total energy = 1782.7971 kcal/mol (1782.7911 without restraints) Performing minimization step: 3769. Total energy = 1782.7461 kcal/mol (1782.7400 without restraints) Performing minimization step: 3770. Total energy = 1782.6950 kcal/mol (1782.6889 without restraints) Performing minimization step: 3771. Total energy = 1782.6439 kcal/mol (1782.6379 without restraints) Performing minimization step: 3772. Total energy = 1782.5929 kcal/mol (1782.5869 without restraints) Performing minimization step: 3773. Total energy = 1782.5419 kcal/mol (1782.5359 without restraints) Performing minimization step: 3774. Total energy = 1782.4912 kcal/mol (1782.4852 without restraints) Performing minimization step: 3775. Total energy = 1782.4405 kcal/mol (1782.4345 without restraints) Performing minimization step: 3776. Total energy = 1782.3895 kcal/mol (1782.3835 without restraints) Performing minimization step: 3777. Total energy = 1782.3390 kcal/mol (1782.3330 without restraints) Performing minimization step: 3778. Total energy = 1782.2880 kcal/mol (1782.2820 without restraints) Performing minimization step: 3779. Total energy = 1782.2371 kcal/mol (1782.2311 without restraints) Performing minimization step: 3780. Total energy = 1782.1862 kcal/mol (1782.1802 without restraints) Performing minimization step: 3781. Total energy = 1782.1351 kcal/mol (1782.1291 without restraints) Performing minimization step: 3782. Total energy = 1782.0842 kcal/mol (1782.0782 without restraints) Performing minimization step: 3783. Total energy = 1782.0334 kcal/mol (1782.0274 without restraints) Performing minimization step: 3784. Total energy = 1781.9826 kcal/mol (1781.9766 without restraints) Performing minimization step: 3785. Total energy = 1781.9317 kcal/mol (1781.9258 without restraints) Performing minimization step: 3786. Total energy = 1781.8810 kcal/mol (1781.8750 without restraints) Performing minimization step: 3787. Total energy = 1781.8296 kcal/mol (1781.8236 without restraints) Performing minimization step: 3788. Total energy = 1781.7789 kcal/mol (1781.7729 without restraints) Performing minimization step: 3789. Total energy = 1781.7281 kcal/mol (1781.7221 without restraints) Performing minimization step: 3790. Total energy = 1781.6774 kcal/mol (1781.6714 without restraints) Performing minimization step: 3791. Total energy = 1781.6265 kcal/mol (1781.6205 without restraints) Performing minimization step: 3792. Total energy = 1781.5757 kcal/mol (1781.5697 without restraints) Performing minimization step: 3793. Total energy = 1781.5248 kcal/mol (1781.5188 without restraints) Performing minimization step: 3794. Total energy = 1781.4740 kcal/mol (1781.4679 without restraints) Performing minimization step: 3795. Total energy = 1781.4232 kcal/mol (1781.4172 without restraints) Performing minimization step: 3796. Total energy = 1781.3726 kcal/mol (1781.3666 without restraints) Performing minimization step: 3797. Total energy = 1781.3219 kcal/mol (1781.3159 without restraints) Performing minimization step: 3798. Total energy = 1781.2712 kcal/mol (1781.2651 without restraints) Performing minimization step: 3799. Total energy = 1781.2205 kcal/mol (1781.2145 without restraints) Performing minimization step: 3800. Total energy = 1781.1700 kcal/mol (1781.1640 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e90c65df/tmp/ENST00000666628_refx/ENST00000666628_refx.pdb ...Done. Performing minimization step: 3801. Total energy = 1781.1196 kcal/mol (1781.1137 without restraints) Performing minimization step: 3802. Total energy = 1781.0696 kcal/mol (1781.0636 without restraints) Performing minimization step: 3803. Total energy = 1781.0194 kcal/mol (1781.0133 without restraints) Performing minimization step: 3804. Total energy = 1780.9687 kcal/mol (1780.9627 without restraints) Performing minimization step: 3805. Total energy = 1780.9182 kcal/mol (1780.9122 without restraints) Performing minimization step: 3806. Total energy = 1780.8678 kcal/mol (1780.8618 without restraints) Performing minimization step: 3807. Total energy = 1780.8176 kcal/mol (1780.8116 without restraints) Performing minimization step: 3808. Total energy = 1780.7672 kcal/mol (1780.7612 without restraints) Performing minimization step: 3809. Total energy = 1780.7168 kcal/mol (1780.7109 without restraints) Performing minimization step: 3810. Total energy = 1780.6665 kcal/mol (1780.6605 without restraints) Performing minimization step: 3811. Total energy = 1780.6162 kcal/mol (1780.6102 without restraints) Performing minimization step: 3812. Total energy = 1780.5660 kcal/mol (1780.5599 without restraints) Performing minimization step: 3813. Total energy = 1780.5156 kcal/mol (1780.5097 without restraints) Performing minimization step: 3814. Total energy = 1780.4653 kcal/mol (1780.4594 without restraints) Performing minimization step: 3815. Total energy = 1780.4153 kcal/mol (1780.4093 without restraints) Performing minimization step: 3816. Total energy = 1780.3648 kcal/mol (1780.3588 without restraints) Performing minimization step: 3817. Total energy = 1780.3143 kcal/mol (1780.3083 without restraints) Performing minimization step: 3818. Total energy = 1780.2641 kcal/mol (1780.2581 without restraints) Performing minimization step: 3819. Total energy = 1780.2139 kcal/mol (1780.2080 without restraints) Performing minimization step: 3820. Total energy = 1780.1639 kcal/mol (1780.1580 without restraints) Performing minimization step: 3821. Total energy = 1780.1138 kcal/mol (1780.1079 without restraints) Performing minimization step: 3822. Total energy = 1780.0636 kcal/mol (1780.0577 without restraints) Performing minimization step: 3823. Total energy = 1780.0138 kcal/mol (1780.0080 without restraints) Performing minimization step: 3824. Total energy = 1779.9640 kcal/mol (1779.9581 without restraints) Performing minimization step: 3825. Total energy = 1779.9140 kcal/mol (1779.9081 without restraints) Performing minimization step: 3826. Total energy = 1779.8639 kcal/mol (1779.8580 without restraints) Performing minimization step: 3827. Total energy = 1779.8139 kcal/mol (1779.8080 without restraints) Performing minimization step: 3828. Total energy = 1779.7638 kcal/mol (1779.7579 without restraints) Performing minimization step: 3829. Total energy = 1779.7138 kcal/mol (1779.7079 without restraints) Performing minimization step: 3830. Total energy = 1779.6634 kcal/mol (1779.6575 without restraints) Performing minimization step: 3831. Total energy = 1779.6135 kcal/mol (1779.6076 without restraints) Performing minimization step: 3832. Total energy = 1779.5635 kcal/mol (1779.5576 without restraints) Performing minimization step: 3833. Total energy = 1779.5133 kcal/mol (1779.5074 without restraints) Performing minimization step: 3834. Total energy = 1779.4634 kcal/mol (1779.4575 without restraints) Performing minimization step: 3835. Total energy = 1779.4137 kcal/mol (1779.4079 without restraints) Performing minimization step: 3836. Total energy = 1779.3639 kcal/mol (1779.3580 without restraints) Performing minimization step: 3837. Total energy = 1779.3140 kcal/mol (1779.3081 without restraints) Performing minimization step: 3838. Total energy = 1779.2641 kcal/mol (1779.2583 without restraints) Performing minimization step: 3839. Total energy = 1779.2143 kcal/mol (1779.2085 without restraints) Performing minimization step: 3840. Total energy = 1779.1643 kcal/mol (1779.1584 without restraints) Performing minimization step: 3841. Total energy = 1779.1147 kcal/mol (1779.1088 without restraints) Performing minimization step: 3842. Total energy = 1779.0649 kcal/mol (1779.0590 without restraints) Performing minimization step: 3843. Total energy = 1779.0152 kcal/mol (1779.0093 without restraints) Performing minimization step: 3844. Total energy = 1778.9654 kcal/mol (1778.9595 without restraints) Performing minimization step: 3845. Total energy = 1778.9156 kcal/mol (1778.9098 without restraints) Performing minimization step: 3846. Total energy = 1778.8657 kcal/mol (1778.8598 without restraints) Performing minimization step: 3847. Total energy = 1778.8160 kcal/mol (1778.8101 without restraints) Performing minimization step: 3848. Total energy = 1778.7663 kcal/mol (1778.7604 without restraints) Performing minimization step: 3849. Total energy = 1778.7164 kcal/mol (1778.7105 without restraints) Performing minimization step: 3850. Total energy = 1778.6669 kcal/mol (1778.6611 without restraints) Performing minimization step: 3851. Total energy = 1778.6171 kcal/mol (1778.6112 without restraints) Performing minimization step: 3852. Total energy = 1778.5675 kcal/mol (1778.5616 without restraints) Performing minimization step: 3853. Total energy = 1778.5180 kcal/mol (1778.5121 without restraints) Performing minimization step: 3854. Total energy = 1778.4684 kcal/mol (1778.4625 without restraints) Performing minimization step: 3855. Total energy = 1778.4188 kcal/mol (1778.4129 without restraints) Performing minimization step: 3856. Total energy = 1778.3692 kcal/mol (1778.3634 without restraints) Performing minimization step: 3857. Total energy = 1778.3199 kcal/mol (1778.3141 without restraints) Performing minimization step: 3858. Total energy = 1778.2711 kcal/mol (1778.2654 without restraints) Performing minimization step: 3859. Total energy = 1778.2218 kcal/mol (1778.2160 without restraints) Performing minimization step: 3860. Total energy = 1778.1723 kcal/mol (1778.1665 without restraints) Performing minimization step: 3861. Total energy = 1778.1229 kcal/mol (1778.1170 without restraints) Performing minimization step: 3862. Total energy = 1778.0736 kcal/mol (1778.0678 without restraints) Performing minimization step: 3863. Total energy = 1778.0242 kcal/mol (1778.0184 without restraints) Performing minimization step: 3864. Total energy = 1777.9748 kcal/mol (1777.9689 without restraints) Performing minimization step: 3865. Total energy = 1777.9254 kcal/mol (1777.9195 without restraints) Performing minimization step: 3866. Total energy = 1777.8760 kcal/mol (1777.8702 without restraints) Performing minimization step: 3867. Total energy = 1777.8266 kcal/mol (1777.8208 without restraints) Performing minimization step: 3868. Total energy = 1777.7774 kcal/mol (1777.7716 without restraints) Performing minimization step: 3869. Total energy = 1777.7281 kcal/mol (1777.7222 without restraints) Performing minimization step: 3870. Total energy = 1777.6787 kcal/mol (1777.6729 without restraints) Performing minimization step: 3871. Total energy = 1777.6294 kcal/mol (1777.6236 without restraints) Performing minimization step: 3872. Total energy = 1777.5798 kcal/mol (1777.5739 without restraints) Performing minimization step: 3873. Total energy = 1777.5306 kcal/mol (1777.5249 without restraints) Performing minimization step: 3874. Total energy = 1777.4814 kcal/mol (1777.4756 without restraints) Performing minimization step: 3875. Total energy = 1777.4322 kcal/mol (1777.4264 without restraints) Performing minimization step: 3876. Total energy = 1777.3829 kcal/mol (1777.3771 without restraints) Performing minimization step: 3877. Total energy = 1777.3338 kcal/mol (1777.3280 without restraints) Performing minimization step: 3878. Total energy = 1777.2847 kcal/mol (1777.2790 without restraints) Performing minimization step: 3879. Total energy = 1777.2357 kcal/mol (1777.2299 without restraints) Performing minimization step: 3880. Total energy = 1777.1866 kcal/mol (1777.1808 without restraints) Performing minimization step: 3881. Total energy = 1777.1377 kcal/mol (1777.1319 without restraints) Performing minimization step: 3882. Total energy = 1777.0885 kcal/mol (1777.0827 without restraints) Performing minimization step: 3883. Total energy = 1777.0396 kcal/mol (1777.0338 without restraints) Performing minimization step: 3884. Total energy = 1776.9904 kcal/mol (1776.9846 without restraints) Performing minimization step: 3885. Total energy = 1776.9413 kcal/mol (1776.9355 without restraints) Performing minimization step: 3886. Total energy = 1776.8923 kcal/mol (1776.8865 without restraints) Performing minimization step: 3887. Total energy = 1776.8430 kcal/mol (1776.8372 without restraints) Performing minimization step: 3888. Total energy = 1776.7940 kcal/mol (1776.7882 without restraints) Performing minimization step: 3889. Total energy = 1776.7452 kcal/mol (1776.7396 without restraints) Performing minimization step: 3890. Total energy = 1776.6965 kcal/mol (1776.6907 without restraints) Performing minimization step: 3891. Total energy = 1776.6475 kcal/mol (1776.6417 without restraints) Performing minimization step: 3892. Total energy = 1776.5985 kcal/mol (1776.5927 without restraints) Performing minimization step: 3893. Total energy = 1776.5495 kcal/mol (1776.5437 without restraints) Performing minimization step: 3894. Total energy = 1776.5008 kcal/mol (1776.4950 without restraints) Performing minimization step: 3895. Total energy = 1776.4521 kcal/mol (1776.4464 without restraints) Performing minimization step: 3896. Total energy = 1776.4033 kcal/mol (1776.3976 without restraints) Performing minimization step: 3897. Total energy = 1776.3543 kcal/mol (1776.3485 without restraints) Performing minimization step: 3898. Total energy = 1776.3051 kcal/mol (1776.2994 without restraints) Performing minimization step: 3899. Total energy = 1776.2561 kcal/mol (1776.2503 without restraints) Performing minimization step: 3900. Total energy = 1776.2074 kcal/mol (1776.2017 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e90c65df/tmp/ENST00000666628_refx/ENST00000666628_refx.pdb ...Done. Performing minimization step: 3901. Total energy = 1776.1586 kcal/mol (1776.1528 without restraints) Performing minimization step: 3902. Total energy = 1776.1097 kcal/mol (1776.1038 without restraints) Performing minimization step: 3903. Total energy = 1776.0607 kcal/mol (1776.0549 without restraints) Performing minimization step: 3904. Total energy = 1776.0117 kcal/mol (1776.0060 without restraints) Performing minimization step: 3905. Total energy = 1775.9630 kcal/mol (1775.9572 without restraints) Performing minimization step: 3906. Total energy = 1775.9142 kcal/mol (1775.9084 without restraints) Performing minimization step: 3907. Total energy = 1775.8657 kcal/mol (1775.8599 without restraints) Performing minimization step: 3908. Total energy = 1775.8167 kcal/mol (1775.8109 without restraints) Performing minimization step: 3909. Total energy = 1775.7679 kcal/mol (1775.7620 without restraints) Performing minimization step: 3910. Total energy = 1775.7192 kcal/mol (1775.7135 without restraints) Performing minimization step: 3911. Total energy = 1775.6708 kcal/mol (1775.6650 without restraints) Performing minimization step: 3912. Total energy = 1775.6220 kcal/mol (1775.6162 without restraints) Performing minimization step: 3913. Total energy = 1775.5734 kcal/mol (1775.5676 without restraints) Performing minimization step: 3914. Total energy = 1775.5254 kcal/mol (1775.5196 without restraints) Performing minimization step: 3915. Total energy = 1775.4764 kcal/mol (1775.4706 without restraints) Performing minimization step: 3916. Total energy = 1775.4277 kcal/mol (1775.4220 without restraints) Performing minimization step: 3917. Total energy = 1775.3794 kcal/mol (1775.3736 without restraints) Performing minimization step: 3918. Total energy = 1775.3305 kcal/mol (1775.3248 without restraints) Performing minimization step: 3919. Total energy = 1775.2819 kcal/mol (1775.2762 without restraints) Performing minimization step: 3920. Total energy = 1775.2336 kcal/mol (1775.2279 without restraints) Performing minimization step: 3921. Total energy = 1775.1854 kcal/mol (1775.1797 without restraints) Performing minimization step: 3922. Total energy = 1775.1369 kcal/mol (1775.1311 without restraints) Performing minimization step: 3923. Total energy = 1775.0882 kcal/mol (1775.0825 without restraints) Performing minimization step: 3924. Total energy = 1775.0397 kcal/mol (1775.0340 without restraints) Performing minimization step: 3925. Total energy = 1774.9915 kcal/mol (1774.9858 without restraints) Performing minimization step: 3926. Total energy = 1774.9430 kcal/mol (1774.9373 without restraints) Performing minimization step: 3927. Total energy = 1774.8946 kcal/mol (1774.8889 without restraints) Performing minimization step: 3928. Total energy = 1774.8462 kcal/mol (1774.8406 without restraints) Performing minimization step: 3929. Total energy = 1774.7979 kcal/mol (1774.7921 without restraints) Performing minimization step: 3930. Total energy = 1774.7494 kcal/mol (1774.7437 without restraints) Performing minimization step: 3931. Total energy = 1774.7012 kcal/mol (1774.6955 without restraints) Performing minimization step: 3932. Total energy = 1774.6531 kcal/mol (1774.6473 without restraints) Performing minimization step: 3933. Total energy = 1774.6047 kcal/mol (1774.5990 without restraints) Performing minimization step: 3934. Total energy = 1774.5561 kcal/mol (1774.5504 without restraints) Performing minimization step: 3935. Total energy = 1774.5078 kcal/mol (1774.5021 without restraints) Performing minimization step: 3936. Total energy = 1774.4594 kcal/mol (1774.4537 without restraints) Performing minimization step: 3937. Total energy = 1774.4111 kcal/mol (1774.4054 without restraints) Performing minimization step: 3938. Total energy = 1774.3629 kcal/mol (1774.3572 without restraints) Performing minimization step: 3939. Total energy = 1774.3148 kcal/mol (1774.3091 without restraints) Performing minimization step: 3940. Total energy = 1774.2665 kcal/mol (1774.2608 without restraints) Performing minimization step: 3941. Total energy = 1774.2183 kcal/mol (1774.2126 without restraints) Performing minimization step: 3942. Total energy = 1774.1700 kcal/mol (1774.1643 without restraints) Performing minimization step: 3943. Total energy = 1774.1218 kcal/mol (1774.1161 without restraints) Performing minimization step: 3944. Total energy = 1774.0736 kcal/mol (1774.0679 without restraints) Performing minimization step: 3945. Total energy = 1774.0252 kcal/mol (1774.0195 without restraints) Performing minimization step: 3946. Total energy = 1773.9770 kcal/mol (1773.9713 without restraints) Performing minimization step: 3947. Total energy = 1773.9287 kcal/mol (1773.9230 without restraints) Performing minimization step: 3948. Total energy = 1773.8808 kcal/mol (1773.8752 without restraints) Performing minimization step: 3949. Total energy = 1773.8328 kcal/mol (1773.8271 without restraints) Performing minimization step: 3950. Total energy = 1773.7848 kcal/mol (1773.7791 without restraints) Performing minimization step: 3951. Total energy = 1773.7367 kcal/mol (1773.7310 without restraints) Performing minimization step: 3952. Total energy = 1773.6883 kcal/mol (1773.6827 without restraints) Performing minimization step: 3953. Total energy = 1773.6403 kcal/mol (1773.6346 without restraints) Performing minimization step: 3954. Total energy = 1773.5922 kcal/mol (1773.5865 without restraints) Performing minimization step: 3955. Total energy = 1773.5441 kcal/mol (1773.5385 without restraints) Performing minimization step: 3956. Total energy = 1773.4961 kcal/mol (1773.4904 without restraints) Performing minimization step: 3957. Total energy = 1773.4483 kcal/mol (1773.4426 without restraints) Performing minimization step: 3958. Total energy = 1773.4007 kcal/mol (1773.3951 without restraints) Performing minimization step: 3959. Total energy = 1773.3527 kcal/mol (1773.3471 without restraints) Performing minimization step: 3960. Total energy = 1773.3047 kcal/mol (1773.2991 without restraints) Performing minimization step: 3961. Total energy = 1773.2566 kcal/mol (1773.2508 without restraints) Performing minimization step: 3962. Total energy = 1773.2085 kcal/mol (1773.2028 without restraints) Performing minimization step: 3963. Total energy = 1773.1605 kcal/mol (1773.1549 without restraints) Performing minimization step: 3964. Total energy = 1773.1126 kcal/mol (1773.1069 without restraints) Performing minimization step: 3965. Total energy = 1773.0644 kcal/mol (1773.0587 without restraints) Performing minimization step: 3966. Total energy = 1773.0165 kcal/mol (1773.0108 without restraints) Performing minimization step: 3967. Total energy = 1772.9685 kcal/mol (1772.9629 without restraints) Performing minimization step: 3968. Total energy = 1772.9206 kcal/mol (1772.9150 without restraints) Performing minimization step: 3969. Total energy = 1772.8727 kcal/mol (1772.8671 without restraints) Performing minimization step: 3970. Total energy = 1772.8248 kcal/mol (1772.8192 without restraints) Performing minimization step: 3971. Total energy = 1772.7772 kcal/mol (1772.7717 without restraints) Performing minimization step: 3972. Total energy = 1772.7295 kcal/mol (1772.7238 without restraints) Performing minimization step: 3973. Total energy = 1772.6817 kcal/mol (1772.6761 without restraints) Performing minimization step: 3974. Total energy = 1772.6338 kcal/mol (1772.6282 without restraints) Performing minimization step: 3975. Total energy = 1772.5859 kcal/mol (1772.5801 without restraints) Performing minimization step: 3976. Total energy = 1772.5378 kcal/mol (1772.5321 without restraints) Performing minimization step: 3977. Total energy = 1772.4900 kcal/mol (1772.4844 without restraints) Performing minimization step: 3978. Total energy = 1772.4422 kcal/mol (1772.4366 without restraints) Performing minimization step: 3979. Total energy = 1772.3945 kcal/mol (1772.3889 without restraints) Performing minimization step: 3980. Total energy = 1772.3468 kcal/mol (1772.3411 without restraints) Performing minimization step: 3981. Total energy = 1772.2990 kcal/mol (1772.2934 without restraints) Performing minimization step: 3982. Total energy = 1772.2513 kcal/mol (1772.2457 without restraints) Performing minimization step: 3983. Total energy = 1772.2038 kcal/mol (1772.1982 without restraints) Performing minimization step: 3984. Total energy = 1772.1559 kcal/mol (1772.1503 without restraints) Performing minimization step: 3985. Total energy = 1772.1083 kcal/mol (1772.1027 without restraints) Performing minimization step: 3986. Total energy = 1772.0606 kcal/mol (1772.0550 without restraints) Performing minimization step: 3987. Total energy = 1772.0129 kcal/mol (1772.0072 without restraints) Performing minimization step: 3988. Total energy = 1771.9650 kcal/mol (1771.9591 without restraints) Performing minimization step: 3989. Total energy = 1771.9171 kcal/mol (1771.9115 without restraints) Performing minimization step: 3990. Total energy = 1771.8693 kcal/mol (1771.8636 without restraints) Performing minimization step: 3991. Total energy = 1771.8217 kcal/mol (1771.8160 without restraints) Performing minimization step: 3992. Total energy = 1771.7741 kcal/mol (1771.7685 without restraints) Performing minimization step: 3993. Total energy = 1771.7264 kcal/mol (1771.7207 without restraints) Performing minimization step: 3994. Total energy = 1771.6788 kcal/mol (1771.6732 without restraints) Performing minimization step: 3995. Total energy = 1771.6312 kcal/mol (1771.6256 without restraints) Performing minimization step: 3996. Total energy = 1771.5836 kcal/mol (1771.5779 without restraints) Performing minimization step: 3997. Total energy = 1771.5360 kcal/mol (1771.5304 without restraints) Performing minimization step: 3998. Total energy = 1771.4885 kcal/mol (1771.4829 without restraints) Performing minimization step: 3999. Total energy = 1771.4410 kcal/mol (1771.4354 without restraints) Performing minimization step: 4000. Total energy = 1771.3935 kcal/mol (1771.3879 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e90c65df/tmp/ENST00000666628_refx/ENST00000666628_refx.pdb ...Done. Performing minimization step: 4001. Total energy = 1771.3461 kcal/mol (1771.3405 without restraints) Performing minimization step: 4002. Total energy = 1771.2985 kcal/mol (1771.2929 without restraints) Performing minimization step: 4003. Total energy = 1771.2511 kcal/mol (1771.2455 without restraints) Performing minimization step: 4004. Total energy = 1771.2036 kcal/mol (1771.1980 without restraints) Performing minimization step: 4005. Total energy = 1771.1562 kcal/mol (1771.1506 without restraints) Performing minimization step: 4006. Total energy = 1771.1088 kcal/mol (1771.1032 without restraints) Performing minimization step: 4007. Total energy = 1771.0612 kcal/mol (1771.0558 without restraints) Performing minimization step: 4008. Total energy = 1771.0140 kcal/mol (1771.0084 without restraints) Performing minimization step: 4009. Total energy = 1770.9666 kcal/mol (1770.9610 without restraints) Performing minimization step: 4010. Total energy = 1770.9192 kcal/mol (1770.9137 without restraints) Performing minimization step: 4011. Total energy = 1770.8717 kcal/mol (1770.8661 without restraints) Performing minimization step: 4012. Total energy = 1770.8246 kcal/mol (1770.8190 without restraints) Performing minimization step: 4013. Total energy = 1770.7772 kcal/mol (1770.7717 without restraints) Performing minimization step: 4014. Total energy = 1770.7301 kcal/mol (1770.7245 without restraints) Performing minimization step: 4015. Total energy = 1770.6828 kcal/mol (1770.6772 without restraints) Performing minimization step: 4016. Total energy = 1770.6353 kcal/mol (1770.6297 without restraints) Performing minimization step: 4017. Total energy = 1770.5881 kcal/mol (1770.5825 without restraints) Performing minimization step: 4018. Total energy = 1770.5408 kcal/mol (1770.5353 without restraints) Performing minimization step: 4019. Total energy = 1770.4936 kcal/mol (1770.4880 without restraints) Performing minimization step: 4020. Total energy = 1770.4464 kcal/mol (1770.4408 without restraints) Performing minimization step: 4021. Total energy = 1770.3994 kcal/mol (1770.3938 without restraints) Performing minimization step: 4022. Total energy = 1770.3522 kcal/mol (1770.3466 without restraints) Performing minimization step: 4023. Total energy = 1770.3051 kcal/mol (1770.2996 without restraints) Performing minimization step: 4024. Total energy = 1770.2580 kcal/mol (1770.2524 without restraints) Performing minimization step: 4025. Total energy = 1770.2106 kcal/mol (1770.2051 without restraints) Performing minimization step: 4026. Total energy = 1770.1633 kcal/mol (1770.1577 without restraints) Performing minimization step: 4027. Total energy = 1770.1159 kcal/mol (1770.1103 without restraints) Performing minimization step: 4028. Total energy = 1770.0687 kcal/mol (1770.0632 without restraints) Performing minimization step: 4029. Total energy = 1770.0216 kcal/mol (1770.0160 without restraints) Performing minimization step: 4030. Total energy = 1769.9745 kcal/mol (1769.9689 without restraints) Performing minimization step: 4031. Total energy = 1769.9276 kcal/mol (1769.9221 without restraints) Performing minimization step: 4032. Total energy = 1769.8807 kcal/mol (1769.8754 without restraints) Performing minimization step: 4033. Total energy = 1769.8338 kcal/mol (1769.8283 without restraints) Performing minimization step: 4034. Total energy = 1769.7870 kcal/mol (1769.7814 without restraints) Performing minimization step: 4035. Total energy = 1769.7401 kcal/mol (1769.7346 without restraints) Performing minimization step: 4036. Total energy = 1769.6930 kcal/mol (1769.6875 without restraints) Performing minimization step: 4037. Total energy = 1769.6457 kcal/mol (1769.6402 without restraints) Performing minimization step: 4038. Total energy = 1769.5989 kcal/mol (1769.5934 without restraints) Performing minimization step: 4039. Total energy = 1769.5517 kcal/mol (1769.5462 without restraints) Performing minimization step: 4040. Total energy = 1769.5045 kcal/mol (1769.4990 without restraints) Performing minimization step: 4041. Total energy = 1769.4576 kcal/mol (1769.4521 without restraints) Performing minimization step: 4042. Total energy = 1769.4106 kcal/mol (1769.4050 without restraints) Performing minimization step: 4043. Total energy = 1769.3634 kcal/mol (1769.3579 without restraints) Performing minimization step: 4044. Total energy = 1769.3165 kcal/mol (1769.3109 without restraints) Performing minimization step: 4045. Total energy = 1769.2695 kcal/mol (1769.2640 without restraints) Performing minimization step: 4046. Total energy = 1769.2226 kcal/mol (1769.2170 without restraints) Performing minimization step: 4047. Total energy = 1769.1757 kcal/mol (1769.1702 without restraints) Performing minimization step: 4048. Total energy = 1769.1288 kcal/mol (1769.1233 without restraints) Performing minimization step: 4049. Total energy = 1769.0819 kcal/mol (1769.0764 without restraints) Performing minimization step: 4050. Total energy = 1769.0352 kcal/mol (1769.0297 without restraints) Performing minimization step: 4051. Total energy = 1768.9882 kcal/mol (1768.9826 without restraints) Performing minimization step: 4052. Total energy = 1768.9413 kcal/mol (1768.9358 without restraints) Performing minimization step: 4053. Total energy = 1768.8952 kcal/mol (1768.8897 without restraints) Performing minimization step: 4054. Total energy = 1768.8484 kcal/mol (1768.8428 without restraints) Performing minimization step: 4055. Total energy = 1768.8015 kcal/mol (1768.7960 without restraints) Performing minimization step: 4056. Total energy = 1768.7547 kcal/mol (1768.7492 without restraints) Performing minimization step: 4057. Total energy = 1768.7078 kcal/mol (1768.7022 without restraints) Performing minimization step: 4058. Total energy = 1768.6609 kcal/mol (1768.6554 without restraints) Performing minimization step: 4059. Total energy = 1768.6142 kcal/mol (1768.6087 without restraints) Performing minimization step: 4060. Total energy = 1768.5676 kcal/mol (1768.5621 without restraints) Performing minimization step: 4061. Total energy = 1768.5207 kcal/mol (1768.5152 without restraints) Performing minimization step: 4062. Total energy = 1768.4739 kcal/mol (1768.4684 without restraints) Performing minimization step: 4063. Total energy = 1768.4272 kcal/mol (1768.4217 without restraints) Performing minimization step: 4064. Total energy = 1768.3803 kcal/mol (1768.3748 without restraints) Performing minimization step: 4065. Total energy = 1768.3336 kcal/mol (1768.3281 without restraints) Performing minimization step: 4066. Total energy = 1768.2869 kcal/mol (1768.2814 without restraints) Performing minimization step: 4067. Total energy = 1768.2402 kcal/mol (1768.2347 without restraints) Performing minimization step: 4068. Total energy = 1768.1938 kcal/mol (1768.1883 without restraints) Performing minimization step: 4069. Total energy = 1768.1475 kcal/mol (1768.1420 without restraints) Performing minimization step: 4070. Total energy = 1768.1007 kcal/mol (1768.0953 without restraints) Performing minimization step: 4071. Total energy = 1768.0542 kcal/mol (1768.0487 without restraints) Performing minimization step: 4072. Total energy = 1768.0075 kcal/mol (1768.0020 without restraints) Performing minimization step: 4073. Total energy = 1767.9606 kcal/mol (1767.9551 without restraints) Performing minimization step: 4074. Total energy = 1767.9140 kcal/mol (1767.9085 without restraints) Performing minimization step: 4075. Total energy = 1767.8674 kcal/mol (1767.8619 without restraints) Performing minimization step: 4076. Total energy = 1767.8207 kcal/mol (1767.8152 without restraints) Performing minimization step: 4077. Total energy = 1767.7743 kcal/mol (1767.7688 without restraints) Performing minimization step: 4078. Total energy = 1767.7276 kcal/mol (1767.7221 without restraints) Performing minimization step: 4079. Total energy = 1767.6810 kcal/mol (1767.6755 without restraints) Performing minimization step: 4080. Total energy = 1767.6345 kcal/mol (1767.6290 without restraints) Performing minimization step: 4081. Total energy = 1767.5879 kcal/mol (1767.5824 without restraints) Performing minimization step: 4082. Total energy = 1767.5414 kcal/mol (1767.5359 without restraints) Performing minimization step: 4083. Total energy = 1767.4949 kcal/mol (1767.4894 without restraints) Performing minimization step: 4084. Total energy = 1767.4486 kcal/mol (1767.4431 without restraints) Performing minimization step: 4085. Total energy = 1767.4021 kcal/mol (1767.3966 without restraints) Performing minimization step: 4086. Total energy = 1767.3556 kcal/mol (1767.3501 without restraints) Performing minimization step: 4087. Total energy = 1767.3091 kcal/mol (1767.3037 without restraints) Performing minimization step: 4088. Total energy = 1767.2627 kcal/mol (1767.2572 without restraints) Performing minimization step: 4089. Total energy = 1767.2162 kcal/mol (1767.2107 without restraints) Performing minimization step: 4090. Total energy = 1767.1698 kcal/mol (1767.1643 without restraints) Performing minimization step: 4091. Total energy = 1767.1233 kcal/mol (1767.1179 without restraints) Performing minimization step: 4092. Total energy = 1767.0773 kcal/mol (1767.0718 without restraints) Performing minimization step: 4093. Total energy = 1767.0309 kcal/mol (1767.0254 without restraints) Performing minimization step: 4094. Total energy = 1766.9844 kcal/mol (1766.9790 without restraints) Performing minimization step: 4095. Total energy = 1766.9380 kcal/mol (1766.9325 without restraints) Performing minimization step: 4096. Total energy = 1766.8915 kcal/mol (1766.8859 without restraints) Performing minimization step: 4097. Total energy = 1766.8450 kcal/mol (1766.8395 without restraints) Performing minimization step: 4098. Total energy = 1766.7984 kcal/mol (1766.7930 without restraints) Performing minimization step: 4099. Total energy = 1766.7521 kcal/mol (1766.7466 without restraints) Performing minimization step: 4100. Total energy = 1766.7057 kcal/mol (1766.7003 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e90c65df/tmp/ENST00000666628_refx/ENST00000666628_refx.pdb ...Done. Performing minimization step: 4101. Total energy = 1766.6596 kcal/mol (1766.6542 without restraints) Performing minimization step: 4102. Total energy = 1766.6133 kcal/mol (1766.6078 without restraints) Performing minimization step: 4103. Total energy = 1766.5669 kcal/mol (1766.5614 without restraints) Performing minimization step: 4104. Total energy = 1766.5206 kcal/mol (1766.5151 without restraints) Performing minimization step: 4105. Total energy = 1766.4743 kcal/mol (1766.4688 without restraints) Performing minimization step: 4106. Total energy = 1766.4282 kcal/mol (1766.4228 without restraints) Performing minimization step: 4107. Total energy = 1766.3820 kcal/mol (1766.3765 without restraints) Performing minimization step: 4108. Total energy = 1766.3358 kcal/mol (1766.3303 without restraints) Performing minimization step: 4109. Total energy = 1766.2895 kcal/mol (1766.2841 without restraints) Performing minimization step: 4110. Total energy = 1766.2433 kcal/mol (1766.2379 without restraints) Performing minimization step: 4111. Total energy = 1766.1970 kcal/mol (1766.1915 without restraints) Performing minimization step: 4112. Total energy = 1766.1508 kcal/mol (1766.1453 without restraints) Performing minimization step: 4113. Total energy = 1766.1045 kcal/mol (1766.0989 without restraints) Performing minimization step: 4114. Total energy = 1766.0580 kcal/mol (1766.0525 without restraints) Performing minimization step: 4115. Total energy = 1766.0118 kcal/mol (1766.0063 without restraints) Performing minimization step: 4116. Total energy = 1765.9659 kcal/mol (1765.9605 without restraints) Performing minimization step: 4117. Total energy = 1765.9198 kcal/mol (1765.9143 without restraints) Performing minimization step: 4118. Total energy = 1765.8736 kcal/mol (1765.8681 without restraints) Performing minimization step: 4119. Total energy = 1765.8278 kcal/mol (1765.8223 without restraints) Performing minimization step: 4120. Total energy = 1765.7816 kcal/mol (1765.7762 without restraints) Performing minimization step: 4121. Total energy = 1765.7355 kcal/mol (1765.7301 without restraints) Performing minimization step: 4122. Total energy = 1765.6894 kcal/mol (1765.6840 without restraints) Performing minimization step: 4123. Total energy = 1765.6437 kcal/mol (1765.6382 without restraints) Performing minimization step: 4124. Total energy = 1765.5976 kcal/mol (1765.5921 without restraints) Performing minimization step: 4125. Total energy = 1765.5515 kcal/mol (1765.5461 without restraints) Performing minimization step: 4126. Total energy = 1765.5051 kcal/mol (1765.4995 without restraints) Performing minimization step: 4127. Total energy = 1765.4589 kcal/mol (1765.4535 without restraints) Performing minimization step: 4128. Total energy = 1765.4131 kcal/mol (1765.4076 without restraints) Performing minimization step: 4129. Total energy = 1765.3671 kcal/mol (1765.3616 without restraints) Performing minimization step: 4130. Total energy = 1765.3210 kcal/mol (1765.3156 without restraints) Performing minimization step: 4131. Total energy = 1765.2750 kcal/mol (1765.2696 without restraints) Performing minimization step: 4132. Total energy = 1765.2291 kcal/mol (1765.2237 without restraints) Performing minimization step: 4133. Total energy = 1765.1831 kcal/mol (1765.1776 without restraints) Performing minimization step: 4134. Total energy = 1765.1371 kcal/mol (1765.1316 without restraints) Performing minimization step: 4135. Total energy = 1765.0911 kcal/mol (1765.0856 without restraints) Performing minimization step: 4136. Total energy = 1765.0451 kcal/mol (1765.0397 without restraints) Performing minimization step: 4137. Total energy = 1764.9993 kcal/mol (1764.9939 without restraints) Performing minimization step: 4138. Total energy = 1764.9531 kcal/mol (1764.9476 without restraints) Performing minimization step: 4139. Total energy = 1764.9071 kcal/mol (1764.9016 without restraints) Performing minimization step: 4140. Total energy = 1764.8612 kcal/mol (1764.8559 without restraints) Performing minimization step: 4141. Total energy = 1764.8149 kcal/mol (1764.8095 without restraints) Performing minimization step: 4142. Total energy = 1764.7692 kcal/mol (1764.7638 without restraints) Performing minimization step: 4143. Total energy = 1764.7233 kcal/mol (1764.7179 without restraints) Performing minimization step: 4144. Total energy = 1764.6774 kcal/mol (1764.6719 without restraints) Performing minimization step: 4145. Total energy = 1764.6315 kcal/mol (1764.6260 without restraints) Performing minimization step: 4146. Total energy = 1764.5856 kcal/mol (1764.5802 without restraints) Performing minimization step: 4147. Total energy = 1764.5397 kcal/mol (1764.5343 without restraints) Performing minimization step: 4148. Total energy = 1764.4936 kcal/mol (1764.4882 without restraints) Performing minimization step: 4149. Total energy = 1764.4477 kcal/mol (1764.4423 without restraints) Performing minimization step: 4150. Total energy = 1764.4018 kcal/mol (1764.3964 without restraints) Performing minimization step: 4151. Total energy = 1764.3562 kcal/mol (1764.3508 without restraints) Performing minimization step: 4152. Total energy = 1764.3106 kcal/mol (1764.3052 without restraints) Performing minimization step: 4153. Total energy = 1764.2648 kcal/mol (1764.2594 without restraints) Performing minimization step: 4154. Total energy = 1764.2190 kcal/mol (1764.2136 without restraints) Performing minimization step: 4155. Total energy = 1764.1732 kcal/mol (1764.1678 without restraints) Performing minimization step: 4156. Total energy = 1764.1274 kcal/mol (1764.1220 without restraints) Performing minimization step: 4157. Total energy = 1764.0818 kcal/mol (1764.0764 without restraints) Performing minimization step: 4158. Total energy = 1764.0360 kcal/mol (1764.0306 without restraints) Performing minimization step: 4159. Total energy = 1763.9902 kcal/mol (1763.9848 without restraints) Performing minimization step: 4160. Total energy = 1763.9444 kcal/mol (1763.9388 without restraints) Performing minimization step: 4161. Total energy = 1763.8985 kcal/mol (1763.8931 without restraints) Performing minimization step: 4162. Total energy = 1763.8528 kcal/mol (1763.8474 without restraints) Performing minimization step: 4163. Total energy = 1763.8070 kcal/mol (1763.8016 without restraints) Performing minimization step: 4164. Total energy = 1763.7613 kcal/mol (1763.7559 without restraints) Performing minimization step: 4165. Total energy = 1763.7151 kcal/mol (1763.7096 without restraints) Performing minimization step: 4166. Total energy = 1763.6697 kcal/mol (1763.6644 without restraints) Performing minimization step: 4167. Total energy = 1763.6240 kcal/mol (1763.6186 without restraints) Performing minimization step: 4168. Total energy = 1763.5783 kcal/mol (1763.5729 without restraints) Performing minimization step: 4169. Total energy = 1763.5326 kcal/mol (1763.5272 without restraints) Performing minimization step: 4170. Total energy = 1763.4870 kcal/mol (1763.4816 without restraints) Performing minimization step: 4171. Total energy = 1763.4417 kcal/mol (1763.4363 without restraints) Performing minimization step: 4172. Total energy = 1763.3961 kcal/mol (1763.3907 without restraints) Performing minimization step: 4173. Total energy = 1763.3502 kcal/mol (1763.3448 without restraints) Performing minimization step: 4174. Total energy = 1763.3046 kcal/mol (1763.2992 without restraints) Performing minimization step: 4175. Total energy = 1763.2590 kcal/mol (1763.2536 without restraints) Performing minimization step: 4176. Total energy = 1763.2131 kcal/mol (1763.2078 without restraints) Performing minimization step: 4177. Total energy = 1763.1675 kcal/mol (1763.1622 without restraints) Performing minimization step: 4178. Total energy = 1763.1219 kcal/mol (1763.1166 without restraints) Performing minimization step: 4179. Total energy = 1763.0766 kcal/mol (1763.0712 without restraints) Performing minimization step: 4180. Total energy = 1763.0308 kcal/mol (1763.0254 without restraints) Performing minimization step: 4181. Total energy = 1762.9850 kcal/mol (1762.9794 without restraints) Performing minimization step: 4182. Total energy = 1762.9392 kcal/mol (1762.9338 without restraints) Performing minimization step: 4183. Total energy = 1762.8937 kcal/mol (1762.8883 without restraints) Performing minimization step: 4184. Total energy = 1762.8484 kcal/mol (1762.8430 without restraints) Performing minimization step: 4185. Total energy = 1762.8027 kcal/mol (1762.7973 without restraints) Performing minimization step: 4186. Total energy = 1762.7572 kcal/mol (1762.7519 without restraints) Performing minimization step: 4187. Total energy = 1762.7118 kcal/mol (1762.7064 without restraints) Performing minimization step: 4188. Total energy = 1762.6663 kcal/mol (1762.6609 without restraints) Performing minimization step: 4189. Total energy = 1762.6206 kcal/mol (1762.6152 without restraints) Performing minimization step: 4190. Total energy = 1762.5751 kcal/mol (1762.5697 without restraints) Performing minimization step: 4191. Total energy = 1762.5296 kcal/mol (1762.5243 without restraints) Performing minimization step: 4192. Total energy = 1762.4842 kcal/mol (1762.4788 without restraints) Performing minimization step: 4193. Total energy = 1762.4389 kcal/mol (1762.4335 without restraints) Performing minimization step: 4194. Total energy = 1762.3934 kcal/mol (1762.3880 without restraints) Performing minimization step: 4195. Total energy = 1762.3481 kcal/mol (1762.3428 without restraints) Performing minimization step: 4196. Total energy = 1762.3027 kcal/mol (1762.2973 without restraints) Performing minimization step: 4197. Total energy = 1762.2573 kcal/mol (1762.2519 without restraints) Performing minimization step: 4198. Total energy = 1762.2120 kcal/mol (1762.2067 without restraints) Performing minimization step: 4199. Total energy = 1762.1673 kcal/mol (1762.1619 without restraints) Performing minimization step: 4200. Total energy = 1762.1220 kcal/mol (1762.1167 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e90c65df/tmp/ENST00000666628_refx/ENST00000666628_refx.pdb ...Done. Performing minimization step: 4201. Total energy = 1762.0767 kcal/mol (1762.0714 without restraints) Performing minimization step: 4202. Total energy = 1762.0313 kcal/mol (1762.0260 without restraints) Performing minimization step: 4203. Total energy = 1761.9860 kcal/mol (1761.9806 without restraints) Performing minimization step: 4204. Total energy = 1761.9405 kcal/mol (1761.9351 without restraints) Performing minimization step: 4205. Total energy = 1761.8950 kcal/mol (1761.8898 without restraints) Performing minimization step: 4206. Total energy = 1761.8498 kcal/mol (1761.8444 without restraints) Performing minimization step: 4207. Total energy = 1761.8048 kcal/mol (1761.7995 without restraints) Performing minimization step: 4208. Total energy = 1761.7595 kcal/mol (1761.7542 without restraints) Performing minimization step: 4209. Total energy = 1761.7141 kcal/mol (1761.7086 without restraints) Performing minimization step: 4210. Total energy = 1761.6689 kcal/mol (1761.6635 without restraints) Performing minimization step: 4211. Total energy = 1761.6233 kcal/mol (1761.6178 without restraints) Performing minimization step: 4212. Total energy = 1761.5780 kcal/mol (1761.5728 without restraints) Performing minimization step: 4213. Total energy = 1761.5331 kcal/mol (1761.5277 without restraints) Performing minimization step: 4214. Total energy = 1761.4878 kcal/mol (1761.4825 without restraints) Performing minimization step: 4215. Total energy = 1761.4425 kcal/mol (1761.4371 without restraints) Performing minimization step: 4216. Total energy = 1761.3972 kcal/mol (1761.3919 without restraints) Performing minimization step: 4217. Total energy = 1761.3522 kcal/mol (1761.3468 without restraints) Performing minimization step: 4218. Total energy = 1761.3071 kcal/mol (1761.3018 without restraints) Performing minimization step: 4219. Total energy = 1761.2619 kcal/mol (1761.2565 without restraints) Performing minimization step: 4220. Total energy = 1761.2164 kcal/mol (1761.2110 without restraints) Performing minimization step: 4221. Total energy = 1761.1712 kcal/mol (1761.1659 without restraints) Performing minimization step: 4222. Total energy = 1761.1258 kcal/mol (1761.1205 without restraints) Performing minimization step: 4223. Total energy = 1761.0806 kcal/mol (1761.0752 without restraints) Performing minimization step: 4224. Total energy = 1761.0354 kcal/mol (1761.0301 without restraints) Performing minimization step: 4225. Total energy = 1760.9901 kcal/mol (1760.9847 without restraints) Performing minimization step: 4226. Total energy = 1760.9449 kcal/mol (1760.9395 without restraints) Performing minimization step: 4227. Total energy = 1760.8998 kcal/mol (1760.8945 without restraints) Performing minimization step: 4228. Total energy = 1760.8551 kcal/mol (1760.8498 without restraints) Performing minimization step: 4229. Total energy = 1760.8101 kcal/mol (1760.8048 without restraints) Performing minimization step: 4230. Total energy = 1760.7650 kcal/mol (1760.7597 without restraints) Performing minimization step: 4231. Total energy = 1760.7194 kcal/mol (1760.7141 without restraints) Performing minimization step: 4232. Total energy = 1760.6743 kcal/mol (1760.6690 without restraints) Performing minimization step: 4233. Total energy = 1760.6292 kcal/mol (1760.6239 without restraints) Performing minimization step: 4234. Total energy = 1760.5841 kcal/mol (1760.5787 without restraints) Performing minimization step: 4235. Total energy = 1760.5389 kcal/mol (1760.5336 without restraints) Performing minimization step: 4236. Total energy = 1760.4938 kcal/mol (1760.4885 without restraints) Performing minimization step: 4237. Total energy = 1760.4487 kcal/mol (1760.4434 without restraints) Performing minimization step: 4238. Total energy = 1760.4038 kcal/mol (1760.3985 without restraints) Performing minimization step: 4239. Total energy = 1760.3587 kcal/mol (1760.3534 without restraints) Performing minimization step: 4240. Total energy = 1760.3137 kcal/mol (1760.3083 without restraints) Performing minimization step: 4241. Total energy = 1760.2685 kcal/mol (1760.2632 without restraints) Performing minimization step: 4242. Total energy = 1760.2231 kcal/mol (1760.2178 without restraints) Performing minimization step: 4243. Total energy = 1760.1781 kcal/mol (1760.1727 without restraints) Performing minimization step: 4244. Total energy = 1760.1330 kcal/mol (1760.1277 without restraints) Performing minimization step: 4245. Total energy = 1760.0881 kcal/mol (1760.0829 without restraints) Performing minimization step: 4246. Total energy = 1760.0430 kcal/mol (1760.0376 without restraints) Performing minimization step: 4247. Total energy = 1759.9979 kcal/mol (1759.9926 without restraints) Performing minimization step: 4248. Total energy = 1759.9531 kcal/mol (1759.9479 without restraints) Performing minimization step: 4249. Total energy = 1759.9082 kcal/mol (1759.9029 without restraints) Performing minimization step: 4250. Total energy = 1759.8632 kcal/mol (1759.8579 without restraints) Performing minimization step: 4251. Total energy = 1759.8181 kcal/mol (1759.8128 without restraints) Performing minimization step: 4252. Total energy = 1759.7731 kcal/mol (1759.7678 without restraints) Performing minimization step: 4253. Total energy = 1759.7283 kcal/mol (1759.7230 without restraints) Performing minimization step: 4254. Total energy = 1759.6834 kcal/mol (1759.6781 without restraints) Performing minimization step: 4255. Total energy = 1759.6384 kcal/mol (1759.6331 without restraints) Performing minimization step: 4256. Total energy = 1759.5937 kcal/mol (1759.5884 without restraints) Performing minimization step: 4257. Total energy = 1759.5489 kcal/mol (1759.5437 without restraints) Performing minimization step: 4258. Total energy = 1759.5040 kcal/mol (1759.4987 without restraints) Performing minimization step: 4259. Total energy = 1759.4592 kcal/mol (1759.4539 without restraints) Performing minimization step: 4260. Total energy = 1759.4143 kcal/mol (1759.4091 without restraints) Performing minimization step: 4261. Total energy = 1759.3695 kcal/mol (1759.3642 without restraints) Performing minimization step: 4262. Total energy = 1759.3246 kcal/mol (1759.3193 without restraints) Performing minimization step: 4263. Total energy = 1759.2796 kcal/mol (1759.2741 without restraints) Performing minimization step: 4264. Total energy = 1759.2345 kcal/mol (1759.2293 without restraints) Performing minimization step: 4265. Total energy = 1759.1899 kcal/mol (1759.1846 without restraints) Performing minimization step: 4266. Total energy = 1759.1454 kcal/mol (1759.1400 without restraints) Performing minimization step: 4267. Total energy = 1759.1008 kcal/mol (1759.0955 without restraints) Performing minimization step: 4268. Total energy = 1759.0559 kcal/mol (1759.0506 without restraints) Performing minimization step: 4269. Total energy = 1759.0110 kcal/mol (1759.0058 without restraints) Performing minimization step: 4270. Total energy = 1758.9662 kcal/mol (1758.9609 without restraints) Performing minimization step: 4271. Total energy = 1758.9216 kcal/mol (1758.9163 without restraints) Performing minimization step: 4272. Total energy = 1758.8766 kcal/mol (1758.8712 without restraints) Performing minimization step: 4273. Total energy = 1758.8313 kcal/mol (1758.8260 without restraints) Performing minimization step: 4274. Total energy = 1758.7865 kcal/mol (1758.7812 without restraints) Performing minimization step: 4275. Total energy = 1758.7417 kcal/mol (1758.7364 without restraints) Performing minimization step: 4276. Total energy = 1758.6971 kcal/mol (1758.6918 without restraints) Performing minimization step: 4277. Total energy = 1758.6523 kcal/mol (1758.6470 without restraints) Performing minimization step: 4278. Total energy = 1758.6077 kcal/mol (1758.6024 without restraints) Performing minimization step: 4279. Total energy = 1758.5629 kcal/mol (1758.5576 without restraints) Performing minimization step: 4280. Total energy = 1758.5182 kcal/mol (1758.5129 without restraints) Performing minimization step: 4281. Total energy = 1758.4734 kcal/mol (1758.4682 without restraints) Performing minimization step: 4282. Total energy = 1758.4285 kcal/mol (1758.4232 without restraints) Performing minimization step: 4283. Total energy = 1758.3837 kcal/mol (1758.3785 without restraints) Performing minimization step: 4284. Total energy = 1758.3392 kcal/mol (1758.3339 without restraints) Performing minimization step: 4285. Total energy = 1758.2945 kcal/mol (1758.2892 without restraints) Performing minimization step: 4286. Total energy = 1758.2498 kcal/mol (1758.2445 without restraints) Performing minimization step: 4287. Total energy = 1758.2050 kcal/mol (1758.1998 without restraints) Performing minimization step: 4288. Total energy = 1758.1603 kcal/mol (1758.1551 without restraints) Performing minimization step: 4289. Total energy = 1758.1156 kcal/mol (1758.1103 without restraints) Performing minimization step: 4290. Total energy = 1758.0709 kcal/mol (1758.0656 without restraints) Performing minimization step: 4291. Total energy = 1758.0262 kcal/mol (1758.0209 without restraints) Performing minimization step: 4292. Total energy = 1757.9815 kcal/mol (1757.9763 without restraints) Performing minimization step: 4293. Total energy = 1757.9371 kcal/mol (1757.9318 without restraints) Performing minimization step: 4294. Total energy = 1757.8924 kcal/mol (1757.8872 without restraints) Performing minimization step: 4295. Total energy = 1757.8479 kcal/mol (1757.8428 without restraints) Performing minimization step: 4296. Total energy = 1757.8034 kcal/mol (1757.7981 without restraints) Performing minimization step: 4297. Total energy = 1757.7588 kcal/mol (1757.7535 without restraints) Performing minimization step: 4298. Total energy = 1757.7139 kcal/mol (1757.7087 without restraints) Performing minimization step: 4299. Total energy = 1757.6696 kcal/mol (1757.6643 without restraints) Performing minimization step: 4300. Total energy = 1757.6249 kcal/mol (1757.6197 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e90c65df/tmp/ENST00000666628_refx/ENST00000666628_refx.pdb ...Done. Performing minimization step: 4301. Total energy = 1757.5801 kcal/mol (1757.5748 without restraints) Performing minimization step: 4302. Total energy = 1757.5357 kcal/mol (1757.5306 without restraints) Performing minimization step: 4303. Total energy = 1757.4912 kcal/mol (1757.4860 without restraints) Performing minimization step: 4304. Total energy = 1757.4462 kcal/mol (1757.4409 without restraints) Performing minimization step: 4305. Total energy = 1757.4016 kcal/mol (1757.3963 without restraints) Performing minimization step: 4306. Total energy = 1757.3570 kcal/mol (1757.3517 without restraints) Performing minimization step: 4307. Total energy = 1757.3125 kcal/mol (1757.3073 without restraints) Performing minimization step: 4308. Total energy = 1757.2680 kcal/mol (1757.2627 without restraints) Performing minimization step: 4309. Total energy = 1757.2234 kcal/mol (1757.2181 without restraints) Performing minimization step: 4310. Total energy = 1757.1788 kcal/mol (1757.1736 without restraints) Performing minimization step: 4311. Total energy = 1757.1345 kcal/mol (1757.1292 without restraints) Performing minimization step: 4312. Total energy = 1757.0899 kcal/mol (1757.0847 without restraints) Performing minimization step: 4313. Total energy = 1757.0453 kcal/mol (1757.0401 without restraints) Performing minimization step: 4314. Total energy = 1757.0009 kcal/mol (1756.9956 without restraints) Performing minimization step: 4315. Total energy = 1756.9561 kcal/mol (1756.9508 without restraints) Performing minimization step: 4316. Total energy = 1756.9115 kcal/mol (1756.9063 without restraints) Performing minimization step: 4317. Total energy = 1756.8671 kcal/mol (1756.8618 without restraints) Performing minimization step: 4318. Total energy = 1756.8225 kcal/mol (1756.8173 without restraints) Performing minimization step: 4319. Total energy = 1756.7780 kcal/mol (1756.7726 without restraints) Performing minimization step: 4320. Total energy = 1756.7334 kcal/mol (1756.7281 without restraints) Performing minimization step: 4321. Total energy = 1756.6889 kcal/mol (1756.6836 without restraints) Performing minimization step: 4322. Total energy = 1756.6444 kcal/mol (1756.6391 without restraints) Performing minimization step: 4323. Total energy = 1756.5999 kcal/mol (1756.5947 without restraints) Performing minimization step: 4324. Total energy = 1756.5553 kcal/mol (1756.5499 without restraints) Performing minimization step: 4325. Total energy = 1756.5107 kcal/mol (1756.5055 without restraints) Performing minimization step: 4326. Total energy = 1756.4663 kcal/mol (1756.4610 without restraints) Performing minimization step: 4327. Total energy = 1756.4220 kcal/mol (1756.4167 without restraints) Performing minimization step: 4328. Total energy = 1756.3779 kcal/mol (1756.3728 without restraints) Performing minimization step: 4329. Total energy = 1756.3336 kcal/mol (1756.3283 without restraints) Performing minimization step: 4330. Total energy = 1756.2891 kcal/mol (1756.2839 without restraints) Performing minimization step: 4331. Total energy = 1756.2445 kcal/mol (1756.2393 without restraints) Performing minimization step: 4332. Total energy = 1756.2002 kcal/mol (1756.1951 without restraints) Performing minimization step: 4333. Total energy = 1756.1559 kcal/mol (1756.1506 without restraints) Performing minimization step: 4334. Total energy = 1756.1116 kcal/mol (1756.1064 without restraints) Performing minimization step: 4335. Total energy = 1756.0673 kcal/mol (1756.0620 without restraints) Performing minimization step: 4336. Total energy = 1756.0230 kcal/mol (1756.0178 without restraints) Performing minimization step: 4337. Total energy = 1755.9789 kcal/mol (1755.9736 without restraints) Performing minimization step: 4338. Total energy = 1755.9345 kcal/mol (1755.9292 without restraints) Performing minimization step: 4339. Total energy = 1755.8901 kcal/mol (1755.8849 without restraints) Performing minimization step: 4340. Total energy = 1755.8457 kcal/mol (1755.8405 without restraints) Performing minimization step: 4341. Total energy = 1755.8015 kcal/mol (1755.7963 without restraints) Performing minimization step: 4342. Total energy = 1755.7570 kcal/mol (1755.7518 without restraints) Performing minimization step: 4343. Total energy = 1755.7129 kcal/mol (1755.7076 without restraints) Performing minimization step: 4344. Total energy = 1755.6688 kcal/mol (1755.6636 without restraints) Performing minimization step: 4345. Total energy = 1755.6245 kcal/mol (1755.6193 without restraints) Performing minimization step: 4346. Total energy = 1755.5802 kcal/mol (1755.5750 without restraints) Performing minimization step: 4347. Total energy = 1755.5362 kcal/mol (1755.5309 without restraints) Performing minimization step: 4348. Total energy = 1755.4918 kcal/mol (1755.4866 without restraints) Performing minimization step: 4349. Total energy = 1755.4475 kcal/mol (1755.4423 without restraints) Performing minimization step: 4350. Total energy = 1755.4033 kcal/mol (1755.3980 without restraints) Performing minimization step: 4351. Total energy = 1755.3587 kcal/mol (1755.3535 without restraints) Performing minimization step: 4352. Total energy = 1755.3142 kcal/mol (1755.3090 without restraints) Performing minimization step: 4353. Total energy = 1755.2699 kcal/mol (1755.2647 without restraints) Performing minimization step: 4354. Total energy = 1755.2254 kcal/mol (1755.2202 without restraints) Performing minimization step: 4355. Total energy = 1755.1811 kcal/mol (1755.1759 without restraints) Performing minimization step: 4356. Total energy = 1755.1369 kcal/mol (1755.1317 without restraints) Performing minimization step: 4357. Total energy = 1755.0926 kcal/mol (1755.0874 without restraints) Performing minimization step: 4358. Total energy = 1755.0484 kcal/mol (1755.0431 without restraints) Performing minimization step: 4359. Total energy = 1755.0041 kcal/mol (1754.9989 without restraints) Performing minimization step: 4360. Total energy = 1754.9596 kcal/mol (1754.9544 without restraints) Performing minimization step: 4361. Total energy = 1754.9154 kcal/mol (1754.9102 without restraints) Performing minimization step: 4362. Total energy = 1754.8709 kcal/mol (1754.8655 without restraints) Performing minimization step: 4363. Total energy = 1754.8263 kcal/mol (1754.8211 without restraints) Performing minimization step: 4364. Total energy = 1754.7821 kcal/mol (1754.7769 without restraints) Performing minimization step: 4365. Total energy = 1754.7382 kcal/mol (1754.7331 without restraints) Performing minimization step: 4366. Total energy = 1754.6941 kcal/mol (1754.6889 without restraints) Performing minimization step: 4367. Total energy = 1754.6499 kcal/mol (1754.6447 without restraints) Performing minimization step: 4368. Total energy = 1754.6057 kcal/mol (1754.6005 without restraints) Performing minimization step: 4369. Total energy = 1754.5618 kcal/mol (1754.5565 without restraints) Performing minimization step: 4370. Total energy = 1754.5176 kcal/mol (1754.5124 without restraints) Performing minimization step: 4371. Total energy = 1754.4738 kcal/mol (1754.4686 without restraints) Performing minimization step: 4372. Total energy = 1754.4295 kcal/mol (1754.4242 without restraints) Performing minimization step: 4373. Total energy = 1754.3854 kcal/mol (1754.3803 without restraints) Performing minimization step: 4374. Total energy = 1754.3416 kcal/mol (1754.3364 without restraints) Performing minimization step: 4375. Total energy = 1754.2974 kcal/mol (1754.2922 without restraints) Performing minimization step: 4376. Total energy = 1754.2534 kcal/mol (1754.2482 without restraints) Performing minimization step: 4377. Total energy = 1754.2096 kcal/mol (1754.2043 without restraints) Performing minimization step: 4378. Total energy = 1754.1657 kcal/mol (1754.1605 without restraints) Performing minimization step: 4379. Total energy = 1754.1216 kcal/mol (1754.1164 without restraints) Performing minimization step: 4380. Total energy = 1754.0774 kcal/mol (1754.0722 without restraints) Performing minimization step: 4381. Total energy = 1754.0332 kcal/mol (1754.0280 without restraints) Performing minimization step: 4382. Total energy = 1753.9891 kcal/mol (1753.9839 without restraints) Performing minimization step: 4383. Total energy = 1753.9450 kcal/mol (1753.9398 without restraints) Performing minimization step: 4384. Total energy = 1753.9009 kcal/mol (1753.8956 without restraints) Performing minimization step: 4385. Total energy = 1753.8566 kcal/mol (1753.8513 without restraints) Performing minimization step: 4386. Total energy = 1753.8125 kcal/mol (1753.8073 without restraints) Performing minimization step: 4387. Total energy = 1753.7688 kcal/mol (1753.7636 without restraints) Performing minimization step: 4388. Total energy = 1753.7249 kcal/mol (1753.7197 without restraints) Performing minimization step: 4389. Total energy = 1753.6808 kcal/mol (1753.6756 without restraints) Performing minimization step: 4390. Total energy = 1753.6368 kcal/mol (1753.6315 without restraints) Performing minimization step: 4391. Total energy = 1753.5926 kcal/mol (1753.5874 without restraints) Performing minimization step: 4392. Total energy = 1753.5489 kcal/mol (1753.5437 without restraints) Performing minimization step: 4393. Total energy = 1753.5051 kcal/mol (1753.4999 without restraints) Performing minimization step: 4394. Total energy = 1753.4610 kcal/mol (1753.4558 without restraints) Performing minimization step: 4395. Total energy = 1753.4170 kcal/mol (1753.4118 without restraints) Performing minimization step: 4396. Total energy = 1753.3732 kcal/mol (1753.3680 without restraints) Performing minimization step: 4397. Total energy = 1753.3294 kcal/mol (1753.3242 without restraints) Performing minimization step: 4398. Total energy = 1753.2853 kcal/mol (1753.2801 without restraints) Performing minimization step: 4399. Total energy = 1753.2413 kcal/mol (1753.2361 without restraints) Performing minimization step: 4400. Total energy = 1753.1973 kcal/mol (1753.1921 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e90c65df/tmp/ENST00000666628_refx/ENST00000666628_refx.pdb ...Done. Performing minimization step: 4401. Total energy = 1753.1533 kcal/mol (1753.1481 without restraints) Performing minimization step: 4402. Total energy = 1753.1093 kcal/mol (1753.1041 without restraints) Performing minimization step: 4403. Total energy = 1753.0653 kcal/mol (1753.0601 without restraints) Performing minimization step: 4404. Total energy = 1753.0213 kcal/mol (1753.0161 without restraints) Performing minimization step: 4405. Total energy = 1752.9773 kcal/mol (1752.9721 without restraints) Performing minimization step: 4406. Total energy = 1752.9334 kcal/mol (1752.9282 without restraints) Performing minimization step: 4407. Total energy = 1752.8893 kcal/mol (1752.8841 without restraints) Performing minimization step: 4408. Total energy = 1752.8454 kcal/mol (1752.8402 without restraints) Performing minimization step: 4409. Total energy = 1752.8014 kcal/mol (1752.7962 without restraints) Performing minimization step: 4410. Total energy = 1752.7574 kcal/mol (1752.7522 without restraints) Performing minimization step: 4411. Total energy = 1752.7134 kcal/mol (1752.7081 without restraints) Performing minimization step: 4412. Total energy = 1752.6695 kcal/mol (1752.6643 without restraints) Performing minimization step: 4413. Total energy = 1752.6256 kcal/mol (1752.6204 without restraints) Performing minimization step: 4414. Total energy = 1752.5814 kcal/mol (1752.5762 without restraints) Performing minimization step: 4415. Total energy = 1752.5374 kcal/mol (1752.5323 without restraints) Performing minimization step: 4416. Total energy = 1752.4936 kcal/mol (1752.4884 without restraints) Performing minimization step: 4417. Total energy = 1752.4499 kcal/mol (1752.4447 without restraints) Performing minimization step: 4418. Total energy = 1752.4060 kcal/mol (1752.4008 without restraints) Performing minimization step: 4419. Total energy = 1752.3621 kcal/mol (1752.3569 without restraints) Performing minimization step: 4420. Total energy = 1752.3182 kcal/mol (1752.3131 without restraints) Performing minimization step: 4421. Total energy = 1752.2743 kcal/mol (1752.2692 without restraints) Performing minimization step: 4422. Total energy = 1752.2305 kcal/mol (1752.2253 without restraints) Performing minimization step: 4423. Total energy = 1752.1866 kcal/mol (1752.1815 without restraints) Performing minimization step: 4424. Total energy = 1752.1427 kcal/mol (1752.1376 without restraints) Performing minimization step: 4425. Total energy = 1752.0989 kcal/mol (1752.0937 without restraints) Performing minimization step: 4426. Total energy = 1752.0550 kcal/mol (1752.0498 without restraints) Performing minimization step: 4427. Total energy = 1752.0112 kcal/mol (1752.0060 without restraints) Performing minimization step: 4428. Total energy = 1751.9675 kcal/mol (1751.9623 without restraints) Performing minimization step: 4429. Total energy = 1751.9236 kcal/mol (1751.9184 without restraints) Performing minimization step: 4430. Total energy = 1751.8795 kcal/mol (1751.8743 without restraints) Performing minimization step: 4431. Total energy = 1751.8356 kcal/mol (1751.8304 without restraints) Performing minimization step: 4432. Total energy = 1751.7918 kcal/mol (1751.7866 without restraints) Performing minimization step: 4433. Total energy = 1751.7479 kcal/mol (1751.7427 without restraints) Performing minimization step: 4434. Total energy = 1751.7041 kcal/mol (1751.6989 without restraints) Performing minimization step: 4435. Total energy = 1751.6600 kcal/mol (1751.6548 without restraints) Performing minimization step: 4436. Total energy = 1751.6162 kcal/mol (1751.6110 without restraints) Performing minimization step: 4437. Total energy = 1751.5723 kcal/mol (1751.5672 without restraints) Performing minimization step: 4438. Total energy = 1751.5280 kcal/mol (1751.5228 without restraints) Performing minimization step: 4439. Total energy = 1751.4842 kcal/mol (1751.4790 without restraints) Performing minimization step: 4440. Total energy = 1751.4405 kcal/mol (1751.4353 without restraints) Performing minimization step: 4441. Total energy = 1751.3969 kcal/mol (1751.3917 without restraints) Performing minimization step: 4442. Total energy = 1751.3531 kcal/mol (1751.3480 without restraints) Performing minimization step: 4443. Total energy = 1751.3093 kcal/mol (1751.3042 without restraints) Performing minimization step: 4444. Total energy = 1751.2655 kcal/mol (1751.2604 without restraints) Performing minimization step: 4445. Total energy = 1751.2217 kcal/mol (1751.2166 without restraints) Performing minimization step: 4446. Total energy = 1751.1782 kcal/mol (1751.1730 without restraints) Performing minimization step: 4447. Total energy = 1751.1345 kcal/mol (1751.1293 without restraints) Performing minimization step: 4448. Total energy = 1751.0907 kcal/mol (1751.0856 without restraints) Performing minimization step: 4449. Total energy = 1751.0471 kcal/mol (1751.0420 without restraints) Performing minimization step: 4450. Total energy = 1751.0034 kcal/mol (1750.9983 without restraints) Performing minimization step: 4451. Total energy = 1750.9597 kcal/mol (1750.9545 without restraints) Performing minimization step: 4452. Total energy = 1750.9157 kcal/mol (1750.9106 without restraints) Performing minimization step: 4453. Total energy = 1750.8722 kcal/mol (1750.8673 without restraints) Performing minimization step: 4454. Total energy = 1750.8289 kcal/mol (1750.8238 without restraints) Performing minimization step: 4455. Total energy = 1750.7852 kcal/mol (1750.7801 without restraints) Performing minimization step: 4456. Total energy = 1750.7413 kcal/mol (1750.7362 without restraints) Performing minimization step: 4457. Total energy = 1750.6973 kcal/mol (1750.6923 without restraints) Performing minimization step: 4458. Total energy = 1750.6534 kcal/mol (1750.6483 without restraints) Performing minimization step: 4459. Total energy = 1750.6093 kcal/mol (1750.6042 without restraints) Performing minimization step: 4460. Total energy = 1750.5657 kcal/mol (1750.5605 without restraints) Performing minimization step: 4461. Total energy = 1750.5219 kcal/mol (1750.5168 without restraints) Performing minimization step: 4462. Total energy = 1750.4781 kcal/mol (1750.4730 without restraints) Performing minimization step: 4463. Total energy = 1750.4344 kcal/mol (1750.4292 without restraints) Performing minimization step: 4464. Total energy = 1750.3907 kcal/mol (1750.3855 without restraints) Performing minimization step: 4465. Total energy = 1750.3470 kcal/mol (1750.3418 without restraints) Performing minimization step: 4466. Total energy = 1750.3035 kcal/mol (1750.2983 without restraints) Performing minimization step: 4467. Total energy = 1750.2598 kcal/mol (1750.2546 without restraints) Performing minimization step: 4468. Total energy = 1750.2162 kcal/mol (1750.2112 without restraints) Performing minimization step: 4469. Total energy = 1750.1730 kcal/mol (1750.1678 without restraints) Performing minimization step: 4470. Total energy = 1750.1293 kcal/mol (1750.1241 without restraints) Performing minimization step: 4471. Total energy = 1750.0858 kcal/mol (1750.0806 without restraints) Performing minimization step: 4472. Total energy = 1750.0421 kcal/mol (1750.0370 without restraints) Performing minimization step: 4473. Total energy = 1749.9984 kcal/mol (1749.9933 without restraints) Performing minimization step: 4474. Total energy = 1749.9548 kcal/mol (1749.9496 without restraints) Performing minimization step: 4475. Total energy = 1749.9111 kcal/mol (1749.9060 without restraints) Performing minimization step: 4476. Total energy = 1749.8675 kcal/mol (1749.8623 without restraints) Performing minimization step: 4477. Total energy = 1749.8240 kcal/mol (1749.8189 without restraints) Performing minimization step: 4478. Total energy = 1749.7804 kcal/mol (1749.7752 without restraints) Performing minimization step: 4479. Total energy = 1749.7367 kcal/mol (1749.7316 without restraints) Performing minimization step: 4480. Total energy = 1749.6931 kcal/mol (1749.6880 without restraints) Performing minimization step: 4481. Total energy = 1749.6495 kcal/mol (1749.6444 without restraints) Performing minimization step: 4482. Total energy = 1749.6059 kcal/mol (1749.6008 without restraints) Performing minimization step: 4483. Total energy = 1749.5625 kcal/mol (1749.5574 without restraints) Performing minimization step: 4484. Total energy = 1749.5189 kcal/mol (1749.5138 without restraints) Performing minimization step: 4485. Total energy = 1749.4750 kcal/mol (1749.4699 without restraints) Performing minimization step: 4486. Total energy = 1749.4315 kcal/mol (1749.4265 without restraints) Performing minimization step: 4487. Total energy = 1749.3880 kcal/mol (1749.3829 without restraints) Performing minimization step: 4488. Total energy = 1749.3445 kcal/mol (1749.3395 without restraints) Performing minimization step: 4489. Total energy = 1749.3010 kcal/mol (1749.2959 without restraints) Performing minimization step: 4490. Total energy = 1749.2575 kcal/mol (1749.2523 without restraints) Performing minimization step: 4491. Total energy = 1749.2139 kcal/mol (1749.2087 without restraints) Performing minimization step: 4492. Total energy = 1749.1703 kcal/mol (1749.1652 without restraints) Performing minimization step: 4493. Total energy = 1749.1268 kcal/mol (1749.1216 without restraints) Performing minimization step: 4494. Total energy = 1749.0832 kcal/mol (1749.0780 without restraints) Performing minimization step: 4495. Total energy = 1749.0396 kcal/mol (1749.0345 without restraints) Performing minimization step: 4496. Total energy = 1748.9960 kcal/mol (1748.9909 without restraints) Performing minimization step: 4497. Total energy = 1748.9524 kcal/mol (1748.9473 without restraints) Performing minimization step: 4498. Total energy = 1748.9088 kcal/mol (1748.9037 without restraints) Performing minimization step: 4499. Total energy = 1748.8653 kcal/mol (1748.8601 without restraints) Performing minimization step: 4500. Total energy = 1748.8217 kcal/mol (1748.8166 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e90c65df/tmp/ENST00000666628_refx/ENST00000666628_refx.pdb ...Done. Performing minimization step: 4501. Total energy = 1748.7781 kcal/mol (1748.7729 without restraints) Performing minimization step: 4502. Total energy = 1748.7344 kcal/mol (1748.7293 without restraints) Performing minimization step: 4503. Total energy = 1748.6906 kcal/mol (1748.6854 without restraints) Performing minimization step: 4504. Total energy = 1748.6470 kcal/mol (1748.6419 without restraints) Performing minimization step: 4505. Total energy = 1748.6035 kcal/mol (1748.5983 without restraints) Performing minimization step: 4506. Total energy = 1748.5597 kcal/mol (1748.5546 without restraints) Performing minimization step: 4507. Total energy = 1748.5164 kcal/mol (1748.5113 without restraints) Performing minimization step: 4508. Total energy = 1748.4729 kcal/mol (1748.4677 without restraints) Performing minimization step: 4509. Total energy = 1748.4294 kcal/mol (1748.4242 without restraints) Performing minimization step: 4510. Total energy = 1748.3859 kcal/mol (1748.3807 without restraints) Performing minimization step: 4511. Total energy = 1748.3425 kcal/mol (1748.3375 without restraints) Performing minimization step: 4512. Total energy = 1748.2991 kcal/mol (1748.2940 without restraints) Performing minimization step: 4513. Total energy = 1748.2556 kcal/mol (1748.2505 without restraints) Performing minimization step: 4514. Total energy = 1748.2122 kcal/mol (1748.2070 without restraints) Performing minimization step: 4515. Total energy = 1748.1685 kcal/mol (1748.1633 without restraints) Performing minimization step: 4516. Total energy = 1748.1252 kcal/mol (1748.1200 without restraints) Performing minimization step: 4517. Total energy = 1748.0817 kcal/mol (1748.0765 without restraints) Performing minimization step: 4518. Total energy = 1748.0384 kcal/mol (1748.0333 without restraints) Performing minimization step: 4519. Total energy = 1747.9949 kcal/mol (1747.9898 without restraints) Performing minimization step: 4520. Total energy = 1747.9514 kcal/mol (1747.9463 without restraints) Performing minimization step: 4521. Total energy = 1747.9080 kcal/mol (1747.9028 without restraints) Performing minimization step: 4522. Total energy = 1747.8645 kcal/mol (1747.8593 without restraints) Performing minimization step: 4523. Total energy = 1747.8210 kcal/mol (1747.8159 without restraints) Performing minimization step: 4524. Total energy = 1747.7777 kcal/mol (1747.7725 without restraints) Performing minimization step: 4525. Total energy = 1747.7341 kcal/mol (1747.7289 without restraints) Performing minimization step: 4526. Total energy = 1747.6906 kcal/mol (1747.6855 without restraints) Performing minimization step: 4527. Total energy = 1747.6471 kcal/mol (1747.6419 without restraints) Performing minimization step: 4528. Total energy = 1747.6037 kcal/mol (1747.5986 without restraints) Performing minimization step: 4529. Total energy = 1747.5602 kcal/mol (1747.5551 without restraints) Performing minimization step: 4530. Total energy = 1747.5167 kcal/mol (1747.5114 without restraints) Performing minimization step: 4531. Total energy = 1747.4734 kcal/mol (1747.4685 without restraints) Performing minimization step: 4532. Total energy = 1747.4302 kcal/mol (1747.4250 without restraints) Performing minimization step: 4533. Total energy = 1747.3865 kcal/mol (1747.3813 without restraints) Performing minimization step: 4534. Total energy = 1747.3430 kcal/mol (1747.3379 without restraints) Performing minimization step: 4535. Total energy = 1747.2996 kcal/mol (1747.2944 without restraints) Performing minimization step: 4536. Total energy = 1747.2562 kcal/mol (1747.2510 without restraints) Performing minimization step: 4537. Total energy = 1747.2125 kcal/mol (1747.2074 without restraints) Performing minimization step: 4538. Total energy = 1747.1691 kcal/mol (1747.1640 without restraints) Performing minimization step: 4539. Total energy = 1747.1257 kcal/mol (1747.1206 without restraints) Performing minimization step: 4540. Total energy = 1747.0823 kcal/mol (1747.0771 without restraints) Performing minimization step: 4541. Total energy = 1747.0387 kcal/mol (1747.0336 without restraints) Performing minimization step: 4542. Total energy = 1746.9953 kcal/mol (1746.9902 without restraints) Performing minimization step: 4543. Total energy = 1746.9518 kcal/mol (1746.9467 without restraints) Performing minimization step: 4544. Total energy = 1746.9084 kcal/mol (1746.9033 without restraints) Performing minimization step: 4545. Total energy = 1746.8650 kcal/mol (1746.8599 without restraints) Performing minimization step: 4546. Total energy = 1746.8218 kcal/mol (1746.8166 without restraints) Performing minimization step: 4547. Total energy = 1746.7782 kcal/mol (1746.7730 without restraints) Performing minimization step: 4548. Total energy = 1746.7347 kcal/mol (1746.7296 without restraints) Performing minimization step: 4549. Total energy = 1746.6914 kcal/mol (1746.6862 without restraints) Performing minimization step: 4550. Total energy = 1746.6480 kcal/mol (1746.6428 without restraints) Performing minimization step: 4551. Total energy = 1746.6046 kcal/mol (1746.5995 without restraints) Performing minimization step: 4552. Total energy = 1746.5614 kcal/mol (1746.5563 without restraints) Performing minimization step: 4553. Total energy = 1746.5179 kcal/mol (1746.5127 without restraints) Performing minimization step: 4554. Total energy = 1746.4744 kcal/mol (1746.4693 without restraints) Performing minimization step: 4555. Total energy = 1746.4312 kcal/mol (1746.4262 without restraints) Performing minimization step: 4556. Total energy = 1746.3877 kcal/mol (1746.3826 without restraints) Performing minimization step: 4557. Total energy = 1746.3443 kcal/mol (1746.3392 without restraints) Performing minimization step: 4558. Total energy = 1746.3010 kcal/mol (1746.2959 without restraints) Performing minimization step: 4559. Total energy = 1746.2576 kcal/mol (1746.2525 without restraints) Performing minimization step: 4560. Total energy = 1746.2143 kcal/mol (1746.2092 without restraints) Performing minimization step: 4561. Total energy = 1746.1712 kcal/mol (1746.1660 without restraints) Performing minimization step: 4562. Total energy = 1746.1282 kcal/mol (1746.1231 without restraints) Performing minimization step: 4563. Total energy = 1746.0849 kcal/mol (1746.0798 without restraints) Performing minimization step: 4564. Total energy = 1746.0415 kcal/mol (1746.0364 without restraints) Performing minimization step: 4565. Total energy = 1745.9977 kcal/mol (1745.9926 without restraints) Performing minimization step: 4566. Total energy = 1745.9547 kcal/mol (1745.9496 without restraints) Performing minimization step: 4567. Total energy = 1745.9114 kcal/mol (1745.9063 without restraints) Performing minimization step: 4568. Total energy = 1745.8683 kcal/mol (1745.8632 without restraints) Performing minimization step: 4569. Total energy = 1745.8249 kcal/mol (1745.8197 without restraints) Performing minimization step: 4570. Total energy = 1745.7814 kcal/mol (1745.7763 without restraints) Performing minimization step: 4571. Total energy = 1745.7381 kcal/mol (1745.7330 without restraints) Performing minimization step: 4572. Total energy = 1745.6949 kcal/mol (1745.6897 without restraints) Performing minimization step: 4573. Total energy = 1745.6515 kcal/mol (1745.6464 without restraints) Performing minimization step: 4574. Total energy = 1745.6085 kcal/mol (1745.6035 without restraints) Performing minimization step: 4575. Total energy = 1745.5652 kcal/mol (1745.5601 without restraints) Performing minimization step: 4576. Total energy = 1745.5221 kcal/mol (1745.5170 without restraints) Performing minimization step: 4577. Total energy = 1745.4788 kcal/mol (1745.4737 without restraints) Performing minimization step: 4578. Total energy = 1745.4353 kcal/mol (1745.4302 without restraints) Performing minimization step: 4579. Total energy = 1745.3920 kcal/mol (1745.3869 without restraints) Performing minimization step: 4580. Total energy = 1745.3487 kcal/mol (1745.3436 without restraints) Performing minimization step: 4581. Total energy = 1745.3052 kcal/mol (1745.3001 without restraints) Performing minimization step: 4582. Total energy = 1745.2619 kcal/mol (1745.2568 without restraints) Performing minimization step: 4583. Total energy = 1745.2188 kcal/mol (1745.2137 without restraints) Performing minimization step: 4584. Total energy = 1745.1758 kcal/mol (1745.1707 without restraints) Performing minimization step: 4585. Total energy = 1745.1325 kcal/mol (1745.1274 without restraints) Performing minimization step: 4586. Total energy = 1745.0892 kcal/mol (1745.0841 without restraints) Performing minimization step: 4587. Total energy = 1745.0459 kcal/mol (1745.0408 without restraints) Performing minimization step: 4588. Total energy = 1745.0025 kcal/mol (1744.9973 without restraints) Performing minimization step: 4589. Total energy = 1744.9589 kcal/mol (1744.9538 without restraints) Performing minimization step: 4590. Total energy = 1744.9156 kcal/mol (1744.9105 without restraints) Performing minimization step: 4591. Total energy = 1744.8723 kcal/mol (1744.8672 without restraints) Performing minimization step: 4592. Total energy = 1744.8291 kcal/mol (1744.8240 without restraints) Performing minimization step: 4593. Total energy = 1744.7858 kcal/mol (1744.7807 without restraints) Performing minimization step: 4594. Total energy = 1744.7427 kcal/mol (1744.7376 without restraints) Performing minimization step: 4595. Total energy = 1744.6995 kcal/mol (1744.6944 without restraints) Performing minimization step: 4596. Total energy = 1744.6562 kcal/mol (1744.6511 without restraints) Performing minimization step: 4597. Total energy = 1744.6130 kcal/mol (1744.6078 without restraints) Performing minimization step: 4598. Total energy = 1744.5697 kcal/mol (1744.5646 without restraints) Performing minimization step: 4599. Total energy = 1744.5264 kcal/mol (1744.5213 without restraints) Performing minimization step: 4600. Total energy = 1744.4832 kcal/mol (1744.4781 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e90c65df/tmp/ENST00000666628_refx/ENST00000666628_refx.pdb ...Done. Performing minimization step: 4601. Total energy = 1744.4399 kcal/mol (1744.4348 without restraints) Performing minimization step: 4602. Total energy = 1744.3966 kcal/mol (1744.3915 without restraints) Performing minimization step: 4603. Total energy = 1744.3534 kcal/mol (1744.3483 without restraints) Performing minimization step: 4604. Total energy = 1744.3102 kcal/mol (1744.3051 without restraints) Performing minimization step: 4605. Total energy = 1744.2669 kcal/mol (1744.2618 without restraints) Performing minimization step: 4606. Total energy = 1744.2237 kcal/mol (1744.2186 without restraints) Performing minimization step: 4607. Total energy = 1744.1804 kcal/mol (1744.1753 without restraints) Performing minimization step: 4608. Total energy = 1744.1371 kcal/mol (1744.1319 without restraints) Performing minimization step: 4609. Total energy = 1744.0938 kcal/mol (1744.0888 without restraints) Performing minimization step: 4610. Total energy = 1744.0507 kcal/mol (1744.0456 without restraints) Performing minimization step: 4611. Total energy = 1744.0069 kcal/mol (1744.0018 without restraints) Performing minimization step: 4612. Total energy = 1743.9637 kcal/mol (1743.9586 without restraints) Performing minimization step: 4613. Total energy = 1743.9206 kcal/mol (1743.9155 without restraints) Performing minimization step: 4614. Total energy = 1743.8774 kcal/mol (1743.8723 without restraints) Performing minimization step: 4615. Total energy = 1743.8342 kcal/mol (1743.8291 without restraints) Performing minimization step: 4616. Total energy = 1743.7909 kcal/mol (1743.7858 without restraints) Performing minimization step: 4617. Total energy = 1743.7477 kcal/mol (1743.7426 without restraints) Performing minimization step: 4618. Total energy = 1743.7045 kcal/mol (1743.6994 without restraints) Performing minimization step: 4619. Total energy = 1743.6612 kcal/mol (1743.6561 without restraints) Performing minimization step: 4620. Total energy = 1743.6180 kcal/mol (1743.6129 without restraints) Performing minimization step: 4621. Total energy = 1743.5748 kcal/mol (1743.5697 without restraints) Performing minimization step: 4622. Total energy = 1743.5316 kcal/mol (1743.5265 without restraints) Performing minimization step: 4623. Total energy = 1743.4883 kcal/mol (1743.4832 without restraints) Performing minimization step: 4624. Total energy = 1743.4452 kcal/mol (1743.4401 without restraints) Performing minimization step: 4625. Total energy = 1743.4021 kcal/mol (1743.3970 without restraints) Performing minimization step: 4626. Total energy = 1743.3589 kcal/mol (1743.3538 without restraints) Performing minimization step: 4627. Total energy = 1743.3158 kcal/mol (1743.3107 without restraints) Performing minimization step: 4628. Total energy = 1743.2726 kcal/mol (1743.2675 without restraints) Performing minimization step: 4629. Total energy = 1743.2296 kcal/mol (1743.2245 without restraints) Performing minimization step: 4630. Total energy = 1743.1864 kcal/mol (1743.1813 without restraints) Performing minimization step: 4631. Total energy = 1743.1432 kcal/mol (1743.1381 without restraints) Performing minimization step: 4632. Total energy = 1743.1001 kcal/mol (1743.0948 without restraints) Performing minimization step: 4633. Total energy = 1743.0567 kcal/mol (1743.0516 without restraints) Performing minimization step: 4634. Total energy = 1743.0135 kcal/mol (1743.0084 without restraints) Performing minimization step: 4635. Total energy = 1742.9703 kcal/mol (1742.9652 without restraints) Performing minimization step: 4636. Total energy = 1742.9275 kcal/mol (1742.9225 without restraints) Performing minimization step: 4637. Total energy = 1742.8844 kcal/mol (1742.8793 without restraints) Performing minimization step: 4638. Total energy = 1742.8413 kcal/mol (1742.8363 without restraints) Performing minimization step: 4639. Total energy = 1742.7982 kcal/mol (1742.7931 without restraints) Performing minimization step: 4640. Total energy = 1742.7550 kcal/mol (1742.7499 without restraints) Performing minimization step: 4641. Total energy = 1742.7119 kcal/mol (1742.7069 without restraints) Performing minimization step: 4642. Total energy = 1742.6688 kcal/mol (1742.6637 without restraints) Performing minimization step: 4643. Total energy = 1742.6256 kcal/mol (1742.6205 without restraints) Performing minimization step: 4644. Total energy = 1742.5824 kcal/mol (1742.5773 without restraints) Performing minimization step: 4645. Total energy = 1742.5393 kcal/mol (1742.5342 without restraints) Performing minimization step: 4646. Total energy = 1742.4961 kcal/mol (1742.4910 without restraints) Performing minimization step: 4647. Total energy = 1742.4529 kcal/mol (1742.4478 without restraints) Performing minimization step: 4648. Total energy = 1742.4098 kcal/mol (1742.4047 without restraints) Performing minimization step: 4649. Total energy = 1742.3670 kcal/mol (1742.3623 without restraints) Performing minimization step: 4650. Total energy = 1742.3242 kcal/mol (1742.3191 without restraints) Performing minimization step: 4651. Total energy = 1742.2809 kcal/mol (1742.2758 without restraints) Performing minimization step: 4652. Total energy = 1742.2375 kcal/mol (1742.2324 without restraints) Performing minimization step: 4653. Total energy = 1742.1943 kcal/mol (1742.1892 without restraints) Performing minimization step: 4654. Total energy = 1742.1511 kcal/mol (1742.1460 without restraints) Performing minimization step: 4655. Total energy = 1742.1080 kcal/mol (1742.1029 without restraints) Performing minimization step: 4656. Total energy = 1742.0648 kcal/mol (1742.0597 without restraints) Performing minimization step: 4657. Total energy = 1742.0212 kcal/mol (1742.0161 without restraints) Performing minimization step: 4658. Total energy = 1741.9781 kcal/mol (1741.9730 without restraints) Performing minimization step: 4659. Total energy = 1741.9349 kcal/mol (1741.9298 without restraints) Performing minimization step: 4660. Total energy = 1741.8917 kcal/mol (1741.8866 without restraints) Performing minimization step: 4661. Total energy = 1741.8486 kcal/mol (1741.8435 without restraints) Performing minimization step: 4662. Total energy = 1741.8053 kcal/mol (1741.8001 without restraints) Performing minimization step: 4663. Total energy = 1741.7617 kcal/mol (1741.7566 without restraints) Performing minimization step: 4664. Total energy = 1741.7185 kcal/mol (1741.7135 without restraints) Performing minimization step: 4665. Total energy = 1741.6759 kcal/mol (1741.6708 without restraints) Performing minimization step: 4666. Total energy = 1741.6329 kcal/mol (1741.6279 without restraints) Performing minimization step: 4667. Total energy = 1741.5898 kcal/mol (1741.5847 without restraints) Performing minimization step: 4668. Total energy = 1741.5467 kcal/mol (1741.5416 without restraints) Performing minimization step: 4669. Total energy = 1741.5035 kcal/mol (1741.4984 without restraints) Performing minimization step: 4670. Total energy = 1741.4603 kcal/mol (1741.4552 without restraints) Performing minimization step: 4671. Total energy = 1741.4172 kcal/mol (1741.4121 without restraints) Performing minimization step: 4672. Total energy = 1741.3738 kcal/mol (1741.3687 without restraints) Performing minimization step: 4673. Total energy = 1741.3307 kcal/mol (1741.3256 without restraints) Performing minimization step: 4674. Total energy = 1741.2879 kcal/mol (1741.2829 without restraints) Performing minimization step: 4675. Total energy = 1741.2449 kcal/mol (1741.2398 without restraints) Performing minimization step: 4676. Total energy = 1741.2017 kcal/mol (1741.1967 without restraints) Performing minimization step: 4677. Total energy = 1741.1584 kcal/mol (1741.1533 without restraints) Performing minimization step: 4678. Total energy = 1741.1153 kcal/mol (1741.1102 without restraints) Performing minimization step: 4679. Total energy = 1741.0721 kcal/mol (1741.0670 without restraints) Performing minimization step: 4680. Total energy = 1741.0292 kcal/mol (1741.0241 without restraints) Performing minimization step: 4681. Total energy = 1740.9860 kcal/mol (1740.9809 without restraints) Performing minimization step: 4682. Total energy = 1740.9429 kcal/mol (1740.9378 without restraints) Performing minimization step: 4683. Total energy = 1740.8996 kcal/mol (1740.8945 without restraints) Performing minimization step: 4684. Total energy = 1740.8564 kcal/mol (1740.8513 without restraints) Performing minimization step: 4685. Total energy = 1740.8131 kcal/mol (1740.8080 without restraints) Performing minimization step: 4686. Total energy = 1740.7702 kcal/mol (1740.7651 without restraints) Performing minimization step: 4687. Total energy = 1740.7272 kcal/mol (1740.7221 without restraints) Performing minimization step: 4688. Total energy = 1740.6841 kcal/mol (1740.6790 without restraints) Performing minimization step: 4689. Total energy = 1740.6409 kcal/mol (1740.6358 without restraints) Performing minimization step: 4690. Total energy = 1740.5976 kcal/mol (1740.5925 without restraints) Performing minimization step: 4691. Total energy = 1740.5547 kcal/mol (1740.5496 without restraints) Performing minimization step: 4692. Total energy = 1740.5116 kcal/mol (1740.5065 without restraints) Performing minimization step: 4693. Total energy = 1740.4685 kcal/mol (1740.4634 without restraints) Performing minimization step: 4694. Total energy = 1740.4251 kcal/mol (1740.4200 without restraints) Performing minimization step: 4695. Total energy = 1740.3822 kcal/mol (1740.3771 without restraints) Performing minimization step: 4696. Total energy = 1740.3389 kcal/mol (1740.3338 without restraints) Performing minimization step: 4697. Total energy = 1740.2960 kcal/mol (1740.2911 without restraints) Performing minimization step: 4698. Total energy = 1740.2530 kcal/mol (1740.2479 without restraints) Performing minimization step: 4699. Total energy = 1740.2099 kcal/mol (1740.2048 without restraints) Performing minimization step: 4700. Total energy = 1740.1666 kcal/mol (1740.1615 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e90c65df/tmp/ENST00000666628_refx/ENST00000666628_refx.pdb ...Done. Performing minimization step: 4701. Total energy = 1740.1234 kcal/mol (1740.1183 without restraints) Performing minimization step: 4702. Total energy = 1740.0803 kcal/mol (1740.0752 without restraints) Performing minimization step: 4703. Total energy = 1740.0369 kcal/mol (1740.0318 without restraints) Performing minimization step: 4704. Total energy = 1739.9936 kcal/mol (1739.9885 without restraints) Performing minimization step: 4705. Total energy = 1739.9505 kcal/mol (1739.9454 without restraints) Performing minimization step: 4706. Total energy = 1739.9073 kcal/mol (1739.9023 without restraints) Performing minimization step: 4707. Total energy = 1739.8640 kcal/mol (1739.8590 without restraints) Performing minimization step: 4708. Total energy = 1739.8211 kcal/mol (1739.8160 without restraints) Performing minimization step: 4709. Total energy = 1739.7778 kcal/mol (1739.7727 without restraints) Performing minimization step: 4710. Total energy = 1739.7346 kcal/mol (1739.7295 without restraints) Performing minimization step: 4711. Total energy = 1739.6915 kcal/mol (1739.6864 without restraints) Performing minimization step: 4712. Total energy = 1739.6484 kcal/mol (1739.6434 without restraints) Performing minimization step: 4713. Total energy = 1739.6052 kcal/mol (1739.6001 without restraints) Performing minimization step: 4714. Total energy = 1739.5620 kcal/mol (1739.5569 without restraints) Performing minimization step: 4715. Total energy = 1739.5189 kcal/mol (1739.5138 without restraints) Performing minimization step: 4716. Total energy = 1739.4758 kcal/mol (1739.4707 without restraints) Performing minimization step: 4717. Total energy = 1739.4327 kcal/mol (1739.4276 without restraints) Performing minimization step: 4718. Total energy = 1739.3895 kcal/mol (1739.3844 without restraints) Performing minimization step: 4719. Total energy = 1739.3464 kcal/mol (1739.3413 without restraints) Performing minimization step: 4720. Total energy = 1739.3033 kcal/mol (1739.2982 without restraints) Performing minimization step: 4721. Total energy = 1739.2602 kcal/mol (1739.2551 without restraints) Performing minimization step: 4722. Total energy = 1739.2170 kcal/mol (1739.2119 without restraints) Performing minimization step: 4723. Total energy = 1739.1739 kcal/mol (1739.1688 without restraints) Performing minimization step: 4724. Total energy = 1739.1312 kcal/mol (1739.1261 without restraints) Performing minimization step: 4725. Total energy = 1739.0884 kcal/mol (1739.0833 without restraints) Performing minimization step: 4726. Total energy = 1739.0451 kcal/mol (1739.0400 without restraints) Performing minimization step: 4727. Total energy = 1739.0020 kcal/mol (1738.9969 without restraints) Performing minimization step: 4728. Total energy = 1738.9588 kcal/mol (1738.9538 without restraints) Performing minimization step: 4729. Total energy = 1738.9157 kcal/mol (1738.9106 without restraints) Performing minimization step: 4730. Total energy = 1738.8726 kcal/mol (1738.8675 without restraints) Performing minimization step: 4731. Total energy = 1738.8297 kcal/mol (1738.8246 without restraints) Performing minimization step: 4732. Total energy = 1738.7863 kcal/mol (1738.7813 without restraints) Performing minimization step: 4733. Total energy = 1738.7434 kcal/mol (1738.7383 without restraints) Performing minimization step: 4734. Total energy = 1738.7002 kcal/mol (1738.6951 without restraints) Performing minimization step: 4735. Total energy = 1738.6571 kcal/mol (1738.6520 without restraints) Performing minimization step: 4736. Total energy = 1738.6140 kcal/mol (1738.6089 without restraints) Performing minimization step: 4737. Total energy = 1738.5709 kcal/mol (1738.5659 without restraints) Performing minimization step: 4738. Total energy = 1738.5279 kcal/mol (1738.5228 without restraints) Performing minimization step: 4739. Total energy = 1738.4848 kcal/mol (1738.4797 without restraints) Performing minimization step: 4740. Total energy = 1738.4415 kcal/mol (1738.4364 without restraints) Performing minimization step: 4741. Total energy = 1738.3983 kcal/mol (1738.3932 without restraints) Performing minimization step: 4742. Total energy = 1738.3552 kcal/mol (1738.3501 without restraints) Performing minimization step: 4743. Total energy = 1738.3123 kcal/mol (1738.3072 without restraints) Performing minimization step: 4744. Total energy = 1738.2692 kcal/mol (1738.2641 without restraints) Performing minimization step: 4745. Total energy = 1738.2262 kcal/mol (1738.2212 without restraints) Performing minimization step: 4746. Total energy = 1738.1832 kcal/mol (1738.1781 without restraints) Performing minimization step: 4747. Total energy = 1738.1401 kcal/mol (1738.1350 without restraints) Performing minimization step: 4748. Total energy = 1738.0965 kcal/mol (1738.0914 without restraints) Performing minimization step: 4749. Total energy = 1738.0534 kcal/mol (1738.0483 without restraints) Performing minimization step: 4750. Total energy = 1738.0103 kcal/mol (1738.0052 without restraints) Performing minimization step: 4751. Total energy = 1737.9674 kcal/mol (1737.9623 without restraints) Performing minimization step: 4752. Total energy = 1737.9243 kcal/mol (1737.9192 without restraints) Performing minimization step: 4753. Total energy = 1737.8811 kcal/mol (1737.8760 without restraints) Performing minimization step: 4754. Total energy = 1737.8380 kcal/mol (1737.8329 without restraints) Performing minimization step: 4755. Total energy = 1737.7949 kcal/mol (1737.7898 without restraints) Performing minimization step: 4756. Total energy = 1737.7519 kcal/mol (1737.7469 without restraints) Performing minimization step: 4757. Total energy = 1737.7091 kcal/mol (1737.7040 without restraints) Performing minimization step: 4758. Total energy = 1737.6660 kcal/mol (1737.6609 without restraints) Performing minimization step: 4759. Total energy = 1737.6227 kcal/mol (1737.6177 without restraints) Performing minimization step: 4760. Total energy = 1737.5795 kcal/mol (1737.5743 without restraints) Performing minimization step: 4761. Total energy = 1737.5363 kcal/mol (1737.5312 without restraints) Performing minimization step: 4762. Total energy = 1737.4930 kcal/mol (1737.4879 without restraints) Performing minimization step: 4763. Total energy = 1737.4501 kcal/mol (1737.4450 without restraints) Performing minimization step: 4764. Total energy = 1737.4070 kcal/mol (1737.4019 without restraints) Performing minimization step: 4765. Total energy = 1737.3639 kcal/mol (1737.3588 without restraints) Performing minimization step: 4766. Total energy = 1737.3207 kcal/mol (1737.3156 without restraints) Performing minimization step: 4767. Total energy = 1737.2776 kcal/mol (1737.2725 without restraints) Performing minimization step: 4768. Total energy = 1737.2345 kcal/mol (1737.2294 without restraints) Performing minimization step: 4769. Total energy = 1737.1914 kcal/mol (1737.1863 without restraints) Performing minimization step: 4770. Total energy = 1737.1482 kcal/mol (1737.1432 without restraints) Performing minimization step: 4771. Total energy = 1737.1053 kcal/mol (1737.1002 without restraints) Performing minimization step: 4772. Total energy = 1737.0621 kcal/mol (1737.0571 without restraints) Performing minimization step: 4773. Total energy = 1737.0190 kcal/mol (1737.0139 without restraints) Performing minimization step: 4774. Total energy = 1736.9759 kcal/mol (1736.9708 without restraints) Performing minimization step: 4775. Total energy = 1736.9330 kcal/mol (1736.9279 without restraints) Performing minimization step: 4776. Total energy = 1736.8900 kcal/mol (1736.8849 without restraints) Performing minimization step: 4777. Total energy = 1736.8469 kcal/mol (1736.8418 without restraints) Performing minimization step: 4778. Total energy = 1736.8038 kcal/mol (1736.7987 without restraints) Performing minimization step: 4779. Total energy = 1736.7606 kcal/mol (1736.7555 without restraints) Performing minimization step: 4780. Total energy = 1736.7173 kcal/mol (1736.7122 without restraints) Performing minimization step: 4781. Total energy = 1736.6742 kcal/mol (1736.6691 without restraints) Performing minimization step: 4782. Total energy = 1736.6310 kcal/mol (1736.6259 without restraints) Performing minimization step: 4783. Total energy = 1736.5877 kcal/mol (1736.5826 without restraints) Performing minimization step: 4784. Total energy = 1736.5445 kcal/mol (1736.5395 without restraints) Performing minimization step: 4785. Total energy = 1736.5013 kcal/mol (1736.4963 without restraints) Performing minimization step: 4786. Total energy = 1736.4583 kcal/mol (1736.4532 without restraints) Performing minimization step: 4787. Total energy = 1736.4152 kcal/mol (1736.4101 without restraints) Performing minimization step: 4788. Total energy = 1736.3721 kcal/mol (1736.3670 without restraints) Performing minimization step: 4789. Total energy = 1736.3290 kcal/mol (1736.3239 without restraints) Performing minimization step: 4790. Total energy = 1736.2858 kcal/mol (1736.2807 without restraints) Performing minimization step: 4791. Total energy = 1736.2427 kcal/mol (1736.2376 without restraints) Performing minimization step: 4792. Total energy = 1736.1997 kcal/mol (1736.1946 without restraints) Performing minimization step: 4793. Total energy = 1736.1566 kcal/mol (1736.1515 without restraints) Performing minimization step: 4794. Total energy = 1736.1137 kcal/mol (1736.1086 without restraints) Performing minimization step: 4795. Total energy = 1736.0706 kcal/mol (1736.0655 without restraints) Performing minimization step: 4796. Total energy = 1736.0274 kcal/mol (1736.0223 without restraints) Performing minimization step: 4797. Total energy = 1735.9843 kcal/mol (1735.9792 without restraints) Performing minimization step: 4798. Total energy = 1735.9411 kcal/mol (1735.9360 without restraints) Performing minimization step: 4799. Total energy = 1735.8980 kcal/mol (1735.8929 without restraints) Performing minimization step: 4800. Total energy = 1735.8549 kcal/mol (1735.8498 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e90c65df/tmp/ENST00000666628_refx/ENST00000666628_refx.pdb ...Done. Performing minimization step: 4801. Total energy = 1735.8117 kcal/mol (1735.8066 without restraints) Performing minimization step: 4802. Total energy = 1735.7686 kcal/mol (1735.7635 without restraints) Performing minimization step: 4803. Total energy = 1735.7254 kcal/mol (1735.7203 without restraints) Performing minimization step: 4804. Total energy = 1735.6821 kcal/mol (1735.6770 without restraints) Performing minimization step: 4805. Total energy = 1735.6391 kcal/mol (1735.6341 without restraints) Performing minimization step: 4806. Total energy = 1735.5960 kcal/mol (1735.5909 without restraints) Performing minimization step: 4807. Total energy = 1735.5529 kcal/mol (1735.5478 without restraints) Performing minimization step: 4808. Total energy = 1735.5098 kcal/mol (1735.5047 without restraints) Performing minimization step: 4809. Total energy = 1735.4667 kcal/mol (1735.4616 without restraints) Performing minimization step: 4810. Total energy = 1735.4235 kcal/mol (1735.4184 without restraints) Performing minimization step: 4811. Total energy = 1735.3804 kcal/mol (1735.3753 without restraints) Performing minimization step: 4812. Total energy = 1735.3372 kcal/mol (1735.3321 without restraints) Performing minimization step: 4813. Total energy = 1735.2941 kcal/mol (1735.2890 without restraints) Performing minimization step: 4814. Total energy = 1735.2513 kcal/mol (1735.2463 without restraints) Performing minimization step: 4815. Total energy = 1735.2084 kcal/mol (1735.2033 without restraints) Performing minimization step: 4816. Total energy = 1735.1650 kcal/mol (1735.1599 without restraints) Performing minimization step: 4817. Total energy = 1735.1219 kcal/mol (1735.1168 without restraints) Performing minimization step: 4818. Total energy = 1735.0789 kcal/mol (1735.0739 without restraints) Performing minimization step: 4819. Total energy = 1735.0358 kcal/mol (1735.0307 without restraints) Performing minimization step: 4820. Total energy = 1734.9927 kcal/mol (1734.9876 without restraints) Performing minimization step: 4821. Total energy = 1734.9496 kcal/mol (1734.9446 without restraints) Performing minimization step: 4822. Total energy = 1734.9067 kcal/mol (1734.9015 without restraints) Performing minimization step: 4823. Total energy = 1734.8636 kcal/mol (1734.8586 without restraints) Performing minimization step: 4824. Total energy = 1734.8205 kcal/mol (1734.8154 without restraints) Performing minimization step: 4825. Total energy = 1734.7773 kcal/mol (1734.7722 without restraints) Performing minimization step: 4826. Total energy = 1734.7342 kcal/mol (1734.7291 without restraints) Performing minimization step: 4827. Total energy = 1734.6912 kcal/mol (1734.6861 without restraints) Performing minimization step: 4828. Total energy = 1734.6481 kcal/mol (1734.6430 without restraints) Performing minimization step: 4829. Total energy = 1734.6049 kcal/mol (1734.5998 without restraints) Performing minimization step: 4830. Total energy = 1734.5617 kcal/mol (1734.5566 without restraints) Performing minimization step: 4831. Total energy = 1734.5184 kcal/mol (1734.5133 without restraints) Performing minimization step: 4832. Total energy = 1734.4752 kcal/mol (1734.4702 without restraints) Performing minimization step: 4833. Total energy = 1734.4321 kcal/mol (1734.4270 without restraints) Performing minimization step: 4834. Total energy = 1734.3886 kcal/mol (1734.3835 without restraints) Performing minimization step: 4835. Total energy = 1734.3454 kcal/mol (1734.3403 without restraints) Performing minimization step: 4836. Total energy = 1734.3023 kcal/mol (1734.2972 without restraints) Performing minimization step: 4837. Total energy = 1734.2589 kcal/mol (1734.2538 without restraints) Performing minimization step: 4838. Total energy = 1734.2158 kcal/mol (1734.2107 without restraints) Performing minimization step: 4839. Total energy = 1734.1726 kcal/mol (1734.1675 without restraints) Performing minimization step: 4840. Total energy = 1734.1294 kcal/mol (1734.1243 without restraints) Performing minimization step: 4841. Total energy = 1734.0863 kcal/mol (1734.0812 without restraints) Performing minimization step: 4842. Total energy = 1734.0430 kcal/mol (1734.0380 without restraints) Performing minimization step: 4843. Total energy = 1733.9999 kcal/mol (1733.9948 without restraints) Performing minimization step: 4844. Total energy = 1733.9569 kcal/mol (1733.9518 without restraints) Performing minimization step: 4845. Total energy = 1733.9137 kcal/mol (1733.9086 without restraints) Performing minimization step: 4846. Total energy = 1733.8705 kcal/mol (1733.8655 without restraints) Performing minimization step: 4847. Total energy = 1733.8276 kcal/mol (1733.8225 without restraints) Performing minimization step: 4848. Total energy = 1733.7845 kcal/mol (1733.7794 without restraints) Performing minimization step: 4849. Total energy = 1733.7413 kcal/mol (1733.7362 without restraints) Performing minimization step: 4850. Total energy = 1733.6981 kcal/mol (1733.6930 without restraints) Performing minimization step: 4851. Total energy = 1733.6547 kcal/mol (1733.6496 without restraints) Performing minimization step: 4852. Total energy = 1733.6115 kcal/mol (1733.6064 without restraints) Performing minimization step: 4853. Total energy = 1733.5684 kcal/mol (1733.5633 without restraints) Performing minimization step: 4854. Total energy = 1733.5252 kcal/mol (1733.5201 without restraints) Performing minimization step: 4855. Total energy = 1733.4821 kcal/mol (1733.4770 without restraints) Performing minimization step: 4856. Total energy = 1733.4389 kcal/mol (1733.4338 without restraints) Performing minimization step: 4857. Total energy = 1733.3958 kcal/mol (1733.3907 without restraints) Performing minimization step: 4858. Total energy = 1733.3525 kcal/mol (1733.3473 without restraints) Performing minimization step: 4859. Total energy = 1733.3091 kcal/mol (1733.3040 without restraints) Performing minimization step: 4860. Total energy = 1733.2659 kcal/mol (1733.2608 without restraints) Performing minimization step: 4861. Total energy = 1733.2227 kcal/mol (1733.2176 without restraints) Performing minimization step: 4862. Total energy = 1733.1798 kcal/mol (1733.1747 without restraints) Performing minimization step: 4863. Total energy = 1733.1367 kcal/mol (1733.1316 without restraints) Performing minimization step: 4864. Total energy = 1733.0933 kcal/mol (1733.0882 without restraints) Performing minimization step: 4865. Total energy = 1733.0502 kcal/mol (1733.0452 without restraints) Performing minimization step: 4866. Total energy = 1733.0071 kcal/mol (1733.0020 without restraints) Performing minimization step: 4867. Total energy = 1732.9640 kcal/mol (1732.9589 without restraints) Performing minimization step: 4868. Total energy = 1732.9210 kcal/mol (1732.9159 without restraints) Performing minimization step: 4869. Total energy = 1732.8776 kcal/mol (1732.8726 without restraints) Performing minimization step: 4870. Total energy = 1732.8345 kcal/mol (1732.8294 without restraints) Performing minimization step: 4871. Total energy = 1732.7913 kcal/mol (1732.7862 without restraints) Performing minimization step: 4872. Total energy = 1732.7479 kcal/mol (1732.7428 without restraints) Performing minimization step: 4873. Total energy = 1732.7047 kcal/mol (1732.6996 without restraints) Performing minimization step: 4874. Total energy = 1732.6615 kcal/mol (1732.6564 without restraints) Performing minimization step: 4875. Total energy = 1732.6183 kcal/mol (1732.6132 without restraints) Performing minimization step: 4876. Total energy = 1732.5751 kcal/mol (1732.5700 without restraints) Performing minimization step: 4877. Total energy = 1732.5320 kcal/mol (1732.5269 without restraints) Performing minimization step: 4878. Total energy = 1732.4889 kcal/mol (1732.4839 without restraints) Performing minimization step: 4879. Total energy = 1732.4460 kcal/mol (1732.4410 without restraints) Performing minimization step: 4880. Total energy = 1732.4029 kcal/mol (1732.3978 without restraints) Performing minimization step: 4881. Total energy = 1732.3599 kcal/mol (1732.3548 without restraints) Performing minimization step: 4882. Total energy = 1732.3167 kcal/mol (1732.3115 without restraints) Performing minimization step: 4883. Total energy = 1732.2734 kcal/mol (1732.2684 without restraints) Performing minimization step: 4884. Total energy = 1732.2303 kcal/mol (1732.2252 without restraints) Performing minimization step: 4885. Total energy = 1732.1871 kcal/mol (1732.1820 without restraints) Performing minimization step: 4886. Total energy = 1732.1438 kcal/mol (1732.1387 without restraints) Performing minimization step: 4887. Total energy = 1732.1005 kcal/mol (1732.0953 without restraints) Performing minimization step: 4888. Total energy = 1732.0572 kcal/mol (1732.0521 without restraints) Performing minimization step: 4889. Total energy = 1732.0140 kcal/mol (1732.0089 without restraints) Performing minimization step: 4890. Total energy = 1731.9706 kcal/mol (1731.9655 without restraints) Performing minimization step: 4891. Total energy = 1731.9275 kcal/mol (1731.9225 without restraints) Performing minimization step: 4892. Total energy = 1731.8844 kcal/mol (1731.8793 without restraints) Performing minimization step: 4893. Total energy = 1731.8412 kcal/mol (1731.8361 without restraints) Performing minimization step: 4894. Total energy = 1731.7980 kcal/mol (1731.7929 without restraints) Performing minimization step: 4895. Total energy = 1731.7548 kcal/mol (1731.7497 without restraints) Performing minimization step: 4896. Total energy = 1731.7116 kcal/mol (1731.7065 without restraints) Performing minimization step: 4897. Total energy = 1731.6684 kcal/mol (1731.6633 without restraints) Performing minimization step: 4898. Total energy = 1731.6252 kcal/mol (1731.6201 without restraints) Performing minimization step: 4899. Total energy = 1731.5818 kcal/mol (1731.5767 without restraints) Performing minimization step: 4900. Total energy = 1731.5386 kcal/mol (1731.5335 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e90c65df/tmp/ENST00000666628_refx/ENST00000666628_refx.pdb ...Done. Performing minimization step: 4901. Total energy = 1731.4954 kcal/mol (1731.4903 without restraints) Performing minimization step: 4902. Total energy = 1731.4522 kcal/mol (1731.4471 without restraints) Performing minimization step: 4903. Total energy = 1731.4092 kcal/mol (1731.4041 without restraints) Performing minimization step: 4904. Total energy = 1731.3658 kcal/mol (1731.3607 without restraints) Performing minimization step: 4905. Total energy = 1731.3227 kcal/mol (1731.3175 without restraints) Performing minimization step: 4906. Total energy = 1731.2795 kcal/mol (1731.2745 without restraints) Performing minimization step: 4907. Total energy = 1731.2364 kcal/mol (1731.2313 without restraints) Performing minimization step: 4908. Total energy = 1731.1932 kcal/mol (1731.1881 without restraints) Performing minimization step: 4909. Total energy = 1731.1500 kcal/mol (1731.1449 without restraints) Performing minimization step: 4910. Total energy = 1731.1068 kcal/mol (1731.1017 without restraints) Performing minimization step: 4911. Total energy = 1731.0638 kcal/mol (1731.0587 without restraints) Performing minimization step: 4912. Total energy = 1731.0206 kcal/mol (1731.0155 without restraints) Performing minimization step: 4913. Total energy = 1730.9773 kcal/mol (1730.9722 without restraints) Performing minimization step: 4914. Total energy = 1730.9337 kcal/mol (1730.9286 without restraints) Performing minimization step: 4915. Total energy = 1730.8905 kcal/mol (1730.8854 without restraints) Performing minimization step: 4916. Total energy = 1730.8473 kcal/mol (1730.8422 without restraints) Performing minimization step: 4917. Total energy = 1730.8040 kcal/mol (1730.7989 without restraints) Performing minimization step: 4918. Total energy = 1730.7608 kcal/mol (1730.7557 without restraints) Performing minimization step: 4919. Total energy = 1730.7176 kcal/mol (1730.7124 without restraints) Performing minimization step: 4920. Total energy = 1730.6743 kcal/mol (1730.6692 without restraints) Performing minimization step: 4921. Total energy = 1730.6311 kcal/mol (1730.6260 without restraints) Performing minimization step: 4922. Total energy = 1730.5879 kcal/mol (1730.5828 without restraints) Performing minimization step: 4923. Total energy = 1730.5446 kcal/mol (1730.5395 without restraints) Performing minimization step: 4924. Total energy = 1730.5014 kcal/mol (1730.4963 without restraints) Performing minimization step: 4925. Total energy = 1730.4581 kcal/mol (1730.4530 without restraints) Performing minimization step: 4926. Total energy = 1730.4149 kcal/mol (1730.4098 without restraints) Performing minimization step: 4927. Total energy = 1730.3716 kcal/mol (1730.3664 without restraints) Performing minimization step: 4928. Total energy = 1730.3283 kcal/mol (1730.3231 without restraints) Performing minimization step: 4929. Total energy = 1730.2850 kcal/mol (1730.2800 without restraints) Performing minimization step: 4930. Total energy = 1730.2418 kcal/mol (1730.2367 without restraints) Performing minimization step: 4931. Total energy = 1730.1985 kcal/mol (1730.1934 without restraints) Performing minimization step: 4932. Total energy = 1730.1553 kcal/mol (1730.1502 without restraints) Performing minimization step: 4933. Total energy = 1730.1124 kcal/mol (1730.1073 without restraints) Performing minimization step: 4934. Total energy = 1730.0692 kcal/mol (1730.0640 without restraints) Performing minimization step: 4935. Total energy = 1730.0257 kcal/mol (1730.0206 without restraints) Performing minimization step: 4936. Total energy = 1729.9827 kcal/mol (1729.9776 without restraints) Performing minimization step: 4937. Total energy = 1729.9397 kcal/mol (1729.9346 without restraints) Performing minimization step: 4938. Total energy = 1729.8963 kcal/mol (1729.8911 without restraints) Performing minimization step: 4939. Total energy = 1729.8532 kcal/mol (1729.8481 without restraints) Performing minimization step: 4940. Total energy = 1729.8098 kcal/mol (1729.8047 without restraints) Performing minimization step: 4941. Total energy = 1729.7669 kcal/mol (1729.7618 without restraints) Performing minimization step: 4942. Total energy = 1729.7237 kcal/mol (1729.7186 without restraints) Performing minimization step: 4943. Total energy = 1729.6804 kcal/mol (1729.6753 without restraints) Performing minimization step: 4944. Total energy = 1729.6372 kcal/mol (1729.6321 without restraints) Performing minimization step: 4945. Total energy = 1729.5941 kcal/mol (1729.5890 without restraints) Performing minimization step: 4946. Total energy = 1729.5509 kcal/mol (1729.5458 without restraints) Performing minimization step: 4947. Total energy = 1729.5074 kcal/mol (1729.5023 without restraints) Performing minimization step: 4948. Total energy = 1729.4644 kcal/mol (1729.4592 without restraints) Performing minimization step: 4949. Total energy = 1729.4211 kcal/mol (1729.4160 without restraints) Performing minimization step: 4950. Total energy = 1729.3779 kcal/mol (1729.3728 without restraints) Performing minimization step: 4951. Total energy = 1729.3346 kcal/mol (1729.3295 without restraints) Performing minimization step: 4952. Total energy = 1729.2914 kcal/mol (1729.2862 without restraints) Performing minimization step: 4953. Total energy = 1729.2481 kcal/mol (1729.2430 without restraints) Performing minimization step: 4954. Total energy = 1729.2048 kcal/mol (1729.1997 without restraints) Performing minimization step: 4955. Total energy = 1729.1616 kcal/mol (1729.1565 without restraints) Performing minimization step: 4956. Total energy = 1729.1186 kcal/mol (1729.1135 without restraints) Performing minimization step: 4957. Total energy = 1729.0753 kcal/mol (1729.0702 without restraints) Performing minimization step: 4958. Total energy = 1729.0322 kcal/mol (1729.0271 without restraints) Performing minimization step: 4959. Total energy = 1728.9890 kcal/mol (1728.9839 without restraints) Performing minimization step: 4960. Total energy = 1728.9458 kcal/mol (1728.9407 without restraints) Performing minimization step: 4961. Total energy = 1728.9025 kcal/mol (1728.8974 without restraints) Performing minimization step: 4962. Total energy = 1728.8594 kcal/mol (1728.8543 without restraints) Performing minimization step: 4963. Total energy = 1728.8162 kcal/mol (1728.8111 without restraints) Performing minimization step: 4964. Total energy = 1728.7731 kcal/mol (1728.7680 without restraints) Performing minimization step: 4965. Total energy = 1728.7298 kcal/mol (1728.7247 without restraints) Performing minimization step: 4966. Total energy = 1728.6865 kcal/mol (1728.6814 without restraints) Performing minimization step: 4967. Total energy = 1728.6433 kcal/mol (1728.6382 without restraints) Performing minimization step: 4968. Total energy = 1728.6000 kcal/mol (1728.5949 without restraints) Performing minimization step: 4969. Total energy = 1728.5567 kcal/mol (1728.5516 without restraints) Performing minimization step: 4970. Total energy = 1728.5134 kcal/mol (1728.5083 without restraints) Performing minimization step: 4971. Total energy = 1728.4698 kcal/mol (1728.4647 without restraints) Performing minimization step: 4972. Total energy = 1728.4265 kcal/mol (1728.4214 without restraints) Performing minimization step: 4973. Total energy = 1728.3833 kcal/mol (1728.3782 without restraints) Performing minimization step: 4974. Total energy = 1728.3400 kcal/mol (1728.3349 without restraints) Performing minimization step: 4975. Total energy = 1728.2967 kcal/mol (1728.2916 without restraints) Performing minimization step: 4976. Total energy = 1728.2537 kcal/mol (1728.2486 without restraints) Performing minimization step: 4977. Total energy = 1728.2104 kcal/mol (1728.2053 without restraints) Performing minimization step: 4978. Total energy = 1728.1672 kcal/mol (1728.1621 without restraints) Performing minimization step: 4979. Total energy = 1728.1239 kcal/mol (1728.1188 without restraints) Performing minimization step: 4980. Total energy = 1728.0806 kcal/mol (1728.0755 without restraints) Performing minimization step: 4981. Total energy = 1728.0374 kcal/mol (1728.0323 without restraints) Performing minimization step: 4982. Total energy = 1727.9942 kcal/mol (1727.9891 without restraints) Performing minimization step: 4983. Total energy = 1727.9510 kcal/mol (1727.9459 without restraints) Performing minimization step: 4984. Total energy = 1727.9077 kcal/mol (1727.9026 without restraints) Performing minimization step: 4985. Total energy = 1727.8646 kcal/mol (1727.8596 without restraints) Performing minimization step: 4986. Total energy = 1727.8214 kcal/mol (1727.8163 without restraints) Performing minimization step: 4987. Total energy = 1727.7781 kcal/mol (1727.7730 without restraints) Performing minimization step: 4988. Total energy = 1727.7348 kcal/mol (1727.7297 without restraints) Performing minimization step: 4989. Total energy = 1727.6914 kcal/mol (1727.6863 without restraints) Performing minimization step: 4990. Total energy = 1727.6481 kcal/mol (1727.6430 without restraints) Performing minimization step: 4991. Total energy = 1727.6048 kcal/mol (1727.5995 without restraints) Performing minimization step: 4992. Total energy = 1727.5613 kcal/mol (1727.5562 without restraints) Performing minimization step: 4993. Total energy = 1727.5179 kcal/mol (1727.5128 without restraints) Performing minimization step: 4994. Total energy = 1727.4746 kcal/mol (1727.4694 without restraints) Performing minimization step: 4995. Total energy = 1727.4313 kcal/mol (1727.4262 without restraints) Performing minimization step: 4996. Total energy = 1727.3880 kcal/mol (1727.3829 without restraints) Performing minimization step: 4997. Total energy = 1727.3447 kcal/mol (1727.3396 without restraints) Performing minimization step: 4998. Total energy = 1727.3014 kcal/mol (1727.2963 without restraints) Performing minimization step: 4999. Total energy = 1727.2580 kcal/mol (1727.2529 without restraints) Performing minimization step: 5000. Total energy = 1727.2148 kcal/mol (1727.2096 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/e90c65df/tmp/ENST00000666628_refx/ENST00000666628_refx.pdb ...Done. /home/ubuntu/rna-tools//opt/qrnas/ Save to ENST00000666628_refx.pdb DONE!