==> seq2_top_1_rpr.pdb <== REMARK 250 Model edited with rna-tools REMARK 250 ver 3.8.13.1+39.gca2dada6.dirty REMARK 250 https://github.com/mmagnus/rna-tools REMARK 250 Tue Jan 27 22:18:13 2026 ATOM 1 P C A 1 -7.990 -19.702 24.949 1.00 21.71 P ATOM 2 OP1 C A 1 -9.441 -19.387 24.765 1.00 21.71 O ATOM 3 OP2 C A 1 -7.072 -19.377 23.813 1.00 21.71 O ATOM 4 O5' C A 1 -7.484 -18.849 26.207 1.00 21.71 O ATOM 5 C5' C A 1 -8.194 -18.903 27.431 1.00 21.71 C ATOM 6 C4' C A 1 -7.465 -18.132 28.512 1.00 21.71 C ==> seq2_top_1_rpr_rpr.pdb <== REMARK 250 Model edited with rna-tools REMARK 250 ver 3.8.13.1+39.gca2dada6.dirty REMARK 250 https://github.com/mmagnus/rna-tools REMARK 250 Tue Jan 27 22:18:14 2026 ATOM 1 P C A 1 -7.990 -19.702 24.949 1.00 21.71 P ATOM 2 OP1 C A 1 -9.441 -19.387 24.765 1.00 21.71 O ATOM 3 OP2 C A 1 -7.072 -19.377 23.813 1.00 21.71 O ATOM 4 O5' C A 1 -7.484 -18.849 26.207 1.00 21.71 O ATOM 5 C5' C A 1 -8.194 -18.903 27.431 1.00 21.71 C ATOM 6 C4' C A 1 -7.465 -18.132 28.512 1.00 21.71 C ==> seq2_top_2_rpr.pdb <== REMARK 250 Model edited with rna-tools REMARK 250 ver 3.8.13.1+39.gca2dada6.dirty REMARK 250 https://github.com/mmagnus/rna-tools REMARK 250 Tue Jan 27 22:18:14 2026 ATOM 1 P C A 1 -13.374 10.531 24.747 1.00 21.96 A P ATOM 2 OP1 C A 1 -14.473 10.776 25.687 1.00 20.42 A O ATOM 3 OP2 C A 1 -13.660 10.760 23.333 1.00 21.71 A O ATOM 4 O5' C A 1 -12.177 11.538 25.155 1.00 21.94 A O ATOM 5 C5' C A 1 -11.714 11.612 26.479 1.00 22.74 A C ATOM 6 C4' C A 1 -10.602 12.604 26.615 1.00 24.22 A C ==> seq2_top_2_rpr_rpr.pdb <== REMARK 250 Model edited with rna-tools REMARK 250 ver 3.8.13.1+39.gca2dada6.dirty REMARK 250 https://github.com/mmagnus/rna-tools REMARK 250 Tue Jan 27 22:18:15 2026 ATOM 1 P C A 1 -13.374 10.531 24.747 1.00 21.96 A P ATOM 2 OP1 C A 1 -14.473 10.776 25.687 1.00 20.42 A O ATOM 3 OP2 C A 1 -13.660 10.760 23.333 1.00 21.71 A O ATOM 4 O5' C A 1 -12.177 11.538 25.155 1.00 21.94 A O ATOM 5 C5' C A 1 -11.714 11.612 26.479 1.00 22.74 A C ATOM 6 C4' C A 1 -10.602 12.604 26.615 1.00 24.22 A C ==> seq2_top_3_rpr.pdb <== REMARK 250 Model edited with rna-tools REMARK 250 ver 3.8.13.1+39.gca2dada6.dirty REMARK 250 https://github.com/mmagnus/rna-tools REMARK 250 Tue Jan 27 22:18:15 2026 ATOM 1 P C A 1 8.228 -6.842 -35.686 1.00 20.07 P ATOM 2 OP1 C A 1 9.300 -6.832 -36.725 1.00 20.07 O ATOM 3 OP2 C A 1 8.636 -6.541 -34.275 1.00 20.07 O ATOM 4 O5' C A 1 7.162 -5.714 -36.101 1.00 20.07 O ATOM 5 C5' C A 1 6.593 -5.742 -37.403 1.00 20.07 C ATOM 6 C4' C A 1 5.497 -4.702 -37.539 1.00 20.07 C ==> seq2_top_3_rpr_rpr.pdb <== REMARK 250 Model edited with rna-tools REMARK 250 ver 3.8.13.1+39.gca2dada6.dirty REMARK 250 https://github.com/mmagnus/rna-tools REMARK 250 Tue Jan 27 22:18:16 2026 ATOM 1 P C A 1 8.228 -6.842 -35.686 1.00 20.07 P ATOM 2 OP1 C A 1 9.300 -6.832 -36.725 1.00 20.07 O ATOM 3 OP2 C A 1 8.636 -6.541 -34.275 1.00 20.07 O ATOM 4 O5' C A 1 7.162 -5.714 -36.101 1.00 20.07 O ATOM 5 C5' C A 1 6.593 -5.742 -37.403 1.00 20.07 C ATOM 6 C4' C A 1 5.497 -4.702 -37.539 1.00 20.07 C ==> seq2_top_4_rpr.pdb <== REMARK 250 Model edited with rna-tools REMARK 250 ver 3.8.13.1+39.gca2dada6.dirty REMARK 250 https://github.com/mmagnus/rna-tools REMARK 250 Tue Jan 27 22:18:16 2026 ATOM 1 P C A 1 -21.559 -27.699 -16.490 1.00 22.27 P ATOM 2 OP1 C A 1 -22.573 -28.238 -15.527 1.00 22.27 O ATOM 3 OP2 C A 1 -21.969 -26.533 -17.337 1.00 22.27 O ATOM 4 O5' C A 1 -20.302 -27.211 -15.624 1.00 22.27 O ATOM 5 C5' C A 1 -19.696 -28.120 -14.711 1.00 22.27 C ATOM 6 C4' C A 1 -18.406 -27.551 -14.150 1.00 22.27 C ==> seq2_top_4_rpr_rpr.pdb <== REMARK 250 Model edited with rna-tools REMARK 250 ver 3.8.13.1+39.gca2dada6.dirty REMARK 250 https://github.com/mmagnus/rna-tools REMARK 250 Tue Jan 27 22:18:17 2026 ATOM 1 P C A 1 -21.559 -27.699 -16.490 1.00 22.27 P ATOM 2 OP1 C A 1 -22.573 -28.238 -15.527 1.00 22.27 O ATOM 3 OP2 C A 1 -21.969 -26.533 -17.337 1.00 22.27 O ATOM 4 O5' C A 1 -20.302 -27.211 -15.624 1.00 22.27 O ATOM 5 C5' C A 1 -19.696 -28.120 -14.711 1.00 22.27 C ATOM 6 C4' C A 1 -18.406 -27.551 -14.150 1.00 22.27 C ==> seq2_top_5_rpr.pdb <== REMARK 250 Model edited with rna-tools REMARK 250 ver 3.8.13.1+39.gca2dada6.dirty REMARK 250 https://github.com/mmagnus/rna-tools REMARK 250 Tue Jan 27 22:18:18 2026 ATOM 1 P C A 1 14.754 10.627 14.152 1.00 20.62 A P ATOM 2 OP1 C A 1 16.064 11.179 14.428 1.00 19.09 A O ATOM 3 OP2 C A 1 13.559 11.415 14.418 1.00 20.17 A O ATOM 4 O5' C A 1 14.703 10.189 12.609 1.00 20.51 A O ATOM 5 C5' C A 1 15.793 9.562 11.984 1.00 21.35 A C ATOM 6 C4' C A 1 15.459 9.194 10.568 1.00 22.72 A C ==> seq2_top_5_rpr_rpr.pdb <== REMARK 250 Model edited with rna-tools REMARK 250 ver 3.8.13.1+39.gca2dada6.dirty REMARK 250 https://github.com/mmagnus/rna-tools REMARK 250 Tue Jan 27 22:18:18 2026 ATOM 1 P C A 1 14.754 10.627 14.152 1.00 20.62 A P ATOM 2 OP1 C A 1 16.064 11.179 14.428 1.00 19.09 A O ATOM 3 OP2 C A 1 13.559 11.415 14.418 1.00 20.17 A O ATOM 4 O5' C A 1 14.703 10.189 12.609 1.00 20.51 A O ATOM 5 C5' C A 1 15.793 9.562 11.984 1.00 21.35 A C ATOM 6 C4' C A 1 15.459 9.194 10.568 1.00 22.72 A C DONE!