============================================================================= Reading config file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/f42e8b68/tmp/ENST00000618027_refx/configfile.txt ============================================================================= ----------------------------------------------------------------------------- Warning: Non-parallel version of QRNA cannot spawn threads. Warning: More threads than cores available. Parameters to be used: Number of minimization steps (NSTEPS): 5000 Golden section step sizes: maximal (MAXSTEP): 0.0001 minimal (MINSTEP): 1e-08 Verbosity (VERBOSE): 1 Write output every: 100 steps (WRITEFREQ) Record trajectory (TRAJECTORY): disabled Pedantic treatment of molecules (PEDANTICMOL): disabled Van der Waals cutoff radius (CUTOFF): 12 Born generalized solvent (USEBORN): disabled Constraints on secondary struct. (SSCONSTR): enabled Auto-detection of secondary struct. (SSDETECT): enabled Secondary structure (SECSTRUCT): none specified Hydrogen bonds (HBONDS): enabled Electrostatics (ELECTR): enabled van der Waals interactions (VANDERWAALS): enabled Anti-blow-up protection (BLOWGUARD): enabled Occupancy as positional restraint (POSRESTRAINTS): disabled Restraints description (RESTRFILE): none Number of parallel threads: 1 ----------------------------------------------------------------------------- Internal Warning: unknown atom type(s) in bond: C2 H5 Internal Warning: unknown atom type(s) in bond: C2 N* Internal Warning: unknown atom type(s) in bond: C2 NB Internal Warning: unknown atom type(s) in bond: C C1 Internal Warning: unknown atom type(s) in bond: CA C1 Internal Warning: unknown atom type(s) in bond: C1 C1 Internal Warning: unknown atom type(s) in bond: C1 CT Internal Warning: unknown atom type(s) in bond: C1 HA Internal Warning: unknown atom type(s) in bond: C1 H4 Internal Warning: unknown atom type(s) in bond: C1 N* Internal Warning: unknown atoms in angle: H5 C2 N* Internal Warning: unknown atoms in angle: H5 C2 NB Internal Warning: unknown atoms in angle: N* C2 NB Internal Warning: unknown atoms in angle: CB N* C2 Internal Warning: unknown atoms in angle: C2 N* CT Internal Warning: unknown atoms in angle: CB NB C2 Internal Warning: unknown atoms in angle: C1 C NA Internal Warning: unknown atoms in angle: C1 C O Internal Warning: unknown atoms in angle: C1 CA N2 Internal Warning: unknown atoms in angle: C1 CA NC Internal Warning: unknown atoms in angle: C C1 C1 Internal Warning: unknown atoms in angle: C C1 CT Internal Warning: unknown atoms in angle: C C1 HA Internal Warning: unknown atoms in angle: C C1 H4 Internal Warning: unknown atoms in angle: CA C1 C1 Internal Warning: unknown atoms in angle: CA C1 HA Internal Warning: unknown atoms in angle: CA C1 H4 Internal Warning: unknown atoms in angle: C1 C1 CT Internal Warning: unknown atoms in angle: C1 C1 HA Internal Warning: unknown atoms in angle: C1 C1 H4 Internal Warning: unknown atoms in angle: C1 C1 N* Internal Warning: unknown atoms in angle: H4 C1 N* Internal Warning: unknown atoms in angle: H1 CT C1 Internal Warning: unknown atoms in angle: HC CT C1 Internal Warning: unknown atoms in angle: C N* C1 Internal Warning: unknown atoms in angle: C1 N* CT Internal Warning: unknown atom(s) in dihedral: X C2 N* X Internal Warning: unknown atom(s) in dihedral: X C2 NB X Internal Warning: unknown atom(s) in dihedral: X C C1 X Internal Warning: unknown atom(s) in dihedral: X CA C1 X Internal Warning: unknown atom(s) in dihedral: X C1 C1 X Internal Warning: unknown atom(s) in dihedral: X C1 CT X Internal Warning: unknown atom(s) in dihedral: X C1 N* X Internal Warning: unknown atom(s) in dihedral: HC CT C1 C1 Internal Warning: unknown atom(s) in dihedral: HC CT C1 C1 Internal Warning: unknown atom(s) in dihedral: C1 C1 C O Internal Warning: unknown atom(s) in dihedral: C1 C1 C O Internal Warning: unknown atom(s) in dihedral: OS CT N* C2 Internal Warning: unknown atom(s) in dihedral: OS CT N* C2 Internal Warning: unknown atom(s) in dihedral: OS CT N* C2 Internal Warning: unknown atom(s) in dihedral: OS CT N* C1 Internal Warning: unknown atom(s) in dihedral: OS CT N* C1 Internal Warning: unknown atom(s) in dihedral: OS CT N* C1 Internal Warning: unknown atom(s) in dihedral: OS CT N* C1 Internal Warning: unknown atom(s) in improper: C C1 N* CT Internal Warning: unknown atom(s) in improper: C C1 C1 CT Internal Warning: unknown atom(s) in improper: C1 N2 CA NC Initializing... Generic atom descriptions read: 47 Generic bond descriptions read: 199 Generic angle descriptions read: 567 Generic dihedral descriptions read: 812 Generic improper descriptions read: 116 Generic vdW descriptions read: 47 ----------------------------------------------------------------------------- ============================================================================= Reading PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/f42e8b68/tmp/ENST00000618027_refx/ENST00000618027.pdb ============================================================================= Atom's 1656 H6 residue renamed to RU3 Atom's 1655 H5 residue renamed to RU3 Atom's 1654 H3 residue renamed to RU3 Atom's 1653 HO'2 residue renamed to RU3 Atom's 1652 H2' residue renamed to RU3 Atom's 1651 H1' residue renamed to RU3 Atom's 1650 H3' residue renamed to RU3 Atom's 1649 H4' residue renamed to RU3 Atom's 1648 H5'2 residue renamed to RU3 Atom's 1647 H5'1 residue renamed to RU3 Atom's 1646 C6 residue renamed to RU3 Atom's 1645 C5 residue renamed to RU3 Atom's 1644 O4 residue renamed to RU3 Atom's 1643 C4 residue renamed to RU3 Atom's 1642 N3 residue renamed to RU3 Atom's 1641 O2 residue renamed to RU3 Atom's 1640 C2 residue renamed to RU3 Atom's 1639 N1 residue renamed to RU3 Atom's 1638 O2' residue renamed to RU3 Atom's 1637 C2' residue renamed to RU3 Atom's 1636 C1' residue renamed to RU3 Atom's 1635 O3' residue renamed to RU3 Atom's 1634 C3' residue renamed to RU3 Atom's 1633 O4' residue renamed to RU3 Atom's 1632 C4' residue renamed to RU3 Atom's 1631 C5' residue renamed to RU3 Atom's 1630 O5' residue renamed to RU3 Atom's 1629 OP1 residue renamed to RU3 Atom's 1628 OP2 residue renamed to RU3 Atom's 1627 P residue renamed to RU3 Missing atom added: ATOM 31 H3T RU3 A 52 -2.380 -12.360 -9.393 1.00 0.00 H Missing atom added: ATOM 2 OP3 U A 1 78.541 -6.844 -29.849 1.00 42.09 O Number of atoms: 1658 Number of residues: 52 Building intraresidual bonds... Building intraresidual angles... Building intraresidual dihedrals... Building intraresidual impropers... Building interresidual bonds... Building interresidual angles... Internal Warning: unknown atoms in angle: H5 C2 N* Internal Warning: unknown atoms in angle: H5 C2 NB Internal Warning: unknown atoms in angle: N* C2 NB Internal Warning: unknown atoms in angle: CB N* C2 Internal Warning: unknown atoms in angle: C2 N* CT Internal Warning: unknown atoms in angle: CB NB C2 Internal Warning: unknown atoms in angle: C1 C NA Internal Warning: unknown atoms in angle: C1 C O Internal Warning: unknown atoms in angle: C1 CA N2 Internal Warning: unknown atoms in angle: C1 CA NC Internal Warning: unknown atoms in angle: C C1 C1 Internal Warning: unknown atoms in angle: C C1 CT Internal Warning: unknown atoms in angle: C C1 HA Internal Warning: unknown atoms in angle: C C1 H4 Internal Warning: unknown atoms in angle: CA C1 C1 Internal Warning: unknown atoms in angle: CA C1 HA Internal Warning: unknown atoms in angle: CA C1 H4 Internal Warning: unknown atoms in angle: C1 C1 CT Internal Warning: unknown atoms in angle: C1 C1 HA Internal Warning: unknown atoms in angle: C1 C1 H4 Internal Warning: unknown atoms in angle: C1 C1 N* Internal Warning: unknown atoms in angle: H4 C1 N* Internal Warning: unknown atoms in angle: H1 CT C1 Internal Warning: unknown atoms in angle: HC CT C1 Internal Warning: unknown atoms in angle: C N* C1 Internal Warning: unknown atoms in angle: C1 N* CT Building interresidual dihedrals... Internal Warning: unknown atom(s) in dihedral: X C2 N* X Internal Warning: unknown atom(s) in dihedral: X C2 NB X Internal Warning: unknown atom(s) in dihedral: X C C1 X Internal Warning: unknown atom(s) in dihedral: X CA C1 X Internal Warning: unknown atom(s) in dihedral: X C1 C1 X Internal Warning: unknown atom(s) in dihedral: X C1 CT X Internal Warning: unknown atom(s) in dihedral: X C1 N* X Internal Warning: unknown atom(s) in dihedral: HC CT C1 C1 Internal Warning: unknown atom(s) in dihedral: HC CT C1 C1 Internal Warning: unknown atom(s) in dihedral: C1 C1 C O Internal Warning: unknown atom(s) in dihedral: C1 C1 C O Internal Warning: unknown atom(s) in dihedral: OS CT N* C2 Internal Warning: unknown atom(s) in dihedral: OS CT N* C2 Internal Warning: unknown atom(s) in dihedral: OS CT N* C2 Internal Warning: unknown atom(s) in dihedral: OS CT N* C1 Internal Warning: unknown atom(s) in dihedral: OS CT N* C1 Internal Warning: unknown atom(s) in dihedral: OS CT N* C1 Internal Warning: unknown atom(s) in dihedral: OS CT N* C1 Number of bonds built: 1785 Number of angles built: 3196 Number of dihedrals built: 4865 Number of impropers built: 348 ----------------------------------------------------------------------------- End of molecule (chain) ----------------------------------------------------------------------------- ----------------------------------------------------------------------------- Building interresidual nonbonded pairs & H-bonds (it may take a while)... Number of electrostatic pairs: 1368672 Number of van der Waals pairs: 147076 Number of H-bonds built: 24 Number of spring restraints: 0 Number of positional restraints: 0 Number of base pairs built: 9 Number of molecules (chains) read: 1 ----------------------------------------------------------------------------- Performing minimization step: 1. Total energy = 3336.7243 kcal/mol (3329.2583 without restraints) Performing minimization step: 2. Total energy = 3329.0009 kcal/mol (3321.5388 without restraints) Performing minimization step: 3. Total energy = 3321.3058 kcal/mol (3313.8476 without restraints) Performing minimization step: 4. Total energy = 3313.6393 kcal/mol (3306.1849 without restraints) Performing minimization step: 5. Total energy = 3306.0011 kcal/mol (3298.5505 without restraints) Performing minimization step: 6. Total energy = 3298.3912 kcal/mol (3290.9444 without restraints) Performing minimization step: 7. Total energy = 3290.8095 kcal/mol (3283.3665 without restraints) Performing minimization step: 8. Total energy = 3283.2560 kcal/mol (3275.8169 without restraints) Performing minimization step: 9. Total energy = 3275.7308 kcal/mol (3268.2955 without restraints) Performing minimization step: 10. Total energy = 3268.2339 kcal/mol (3260.8023 without restraints) Performing minimization step: 11. Total energy = 3260.7646 kcal/mol (3253.3368 without restraints) Performing minimization step: 12. Total energy = 3253.3235 kcal/mol (3245.8995 without restraints) Performing minimization step: 13. Total energy = 3245.9103 kcal/mol (3238.4901 without restraints) Performing minimization step: 14. Total energy = 3238.5248 kcal/mol (3231.1084 without restraints) Performing minimization step: 15. Total energy = 3231.1677 kcal/mol (3223.7550 without restraints) Performing minimization step: 16. Total energy = 3223.8382 kcal/mol (3216.4293 without restraints) Performing minimization step: 17. Total energy = 3216.5362 kcal/mol (3209.1311 without restraints) Performing minimization step: 18. Total energy = 3209.2622 kcal/mol (3201.8609 without restraints) Performing minimization step: 19. Total energy = 3202.0158 kcal/mol (3194.6183 without restraints) Performing minimization step: 20. Total energy = 3194.7975 kcal/mol (3187.4037 without restraints) Performing minimization step: 21. Total energy = 3187.6065 kcal/mol (3180.2163 without restraints) Performing minimization step: 22. Total energy = 3180.4432 kcal/mol (3173.0569 without restraints) Performing minimization step: 23. Total energy = 3173.3075 kcal/mol (3165.9249 without restraints) Performing minimization step: 24. Total energy = 3166.1991 kcal/mol (3158.8201 without restraints) Performing minimization step: 25. Total energy = 3159.1184 kcal/mol (3151.7433 without restraints) Performing minimization step: 26. Total energy = 3152.0651 kcal/mol (3144.6940 without restraints) Performing minimization step: 27. Total energy = 3145.0393 kcal/mol (3137.6717 without restraints) Performing minimization step: 28. Total energy = 3138.0406 kcal/mol (3130.6767 without restraints) Performing minimization step: 29. Total energy = 3131.0692 kcal/mol (3123.7092 without restraints) Performing minimization step: 30. Total energy = 3124.1252 kcal/mol (3116.7688 without restraints) Performing minimization step: 31. Total energy = 3117.2085 kcal/mol (3109.8557 without restraints) Performing minimization step: 32. Total energy = 3110.3184 kcal/mol (3102.9694 without restraints) Performing minimization step: 33. Total energy = 3103.4557 kcal/mol (3096.1104 without restraints) Performing minimization step: 34. Total energy = 3096.6198 kcal/mol (3089.2782 without restraints) Performing minimization step: 35. Total energy = 3089.8111 kcal/mol (3082.4732 without restraints) Performing minimization step: 36. Total energy = 3083.0295 kcal/mol (3075.6953 without restraints) Performing minimization step: 37. Total energy = 3076.2748 kcal/mol (3068.9445 without restraints) Performing minimization step: 38. Total energy = 3069.5473 kcal/mol (3062.2205 without restraints) Performing minimization step: 39. Total energy = 3062.8462 kcal/mol (3055.5231 without restraints) Performing minimization step: 40. Total energy = 3056.1723 kcal/mol (3048.8529 without restraints) Performing minimization step: 41. Total energy = 3049.5247 kcal/mol (3042.2089 without restraints) Performing minimization step: 42. Total energy = 3042.9037 kcal/mol (3035.5917 without restraints) Performing minimization step: 43. Total energy = 3036.3099 kcal/mol (3029.0015 without restraints) Performing minimization step: 44. Total energy = 3029.7422 kcal/mol (3022.4375 without restraints) Performing minimization step: 45. Total energy = 3023.2008 kcal/mol (3015.8997 without restraints) Performing minimization step: 46. Total energy = 3016.6861 kcal/mol (3009.3887 without restraints) Performing minimization step: 47. Total energy = 3010.1978 kcal/mol (3002.9041 without restraints) Performing minimization step: 48. Total energy = 3003.7360 kcal/mol (2996.4459 without restraints) Performing minimization step: 49. Total energy = 2997.3002 kcal/mol (2990.0138 without restraints) Performing minimization step: 50. Total energy = 2990.8909 kcal/mol (2983.6081 without restraints) Performing minimization step: 51. Total energy = 2984.5077 kcal/mol (2977.2285 without restraints) Performing minimization step: 52. Total energy = 2978.1510 kcal/mol (2970.8755 without restraints) Performing minimization step: 53. Total energy = 2971.8204 kcal/mol (2964.5485 without restraints) Performing minimization step: 54. Total energy = 2965.5156 kcal/mol (2958.2473 without restraints) Performing minimization step: 55. Total energy = 2959.2371 kcal/mol (2951.9724 without restraints) Performing minimization step: 56. Total energy = 2952.9845 kcal/mol (2945.7233 without restraints) Performing minimization step: 57. Total energy = 2946.7578 kcal/mol (2939.5003 without restraints) Performing minimization step: 58. Total energy = 2940.5569 kcal/mol (2933.3030 without restraints) Performing minimization step: 59. Total energy = 2934.3818 kcal/mol (2927.1316 without restraints) Performing minimization step: 60. Total energy = 2928.2326 kcal/mol (2920.9858 without restraints) Performing minimization step: 61. Total energy = 2922.1093 kcal/mol (2914.8663 without restraints) Performing minimization step: 62. Total energy = 2916.0116 kcal/mol (2908.7721 without restraints) Performing minimization step: 63. Total energy = 2909.9396 kcal/mol (2902.7037 without restraints) Performing minimization step: 64. Total energy = 2903.8931 kcal/mol (2896.6608 without restraints) Performing minimization step: 65. Total energy = 2897.8719 kcal/mol (2890.6432 without restraints) Performing minimization step: 66. Total energy = 2891.8765 kcal/mol (2884.6514 without restraints) Performing minimization step: 67. Total energy = 2885.9065 kcal/mol (2878.6849 without restraints) Performing minimization step: 68. Total energy = 2879.9615 kcal/mol (2872.7435 without restraints) Performing minimization step: 69. Total energy = 2874.0421 kcal/mol (2866.8277 without restraints) Performing minimization step: 70. Total energy = 2868.1479 kcal/mol (2860.9370 without restraints) Performing minimization step: 71. Total energy = 2862.2792 kcal/mol (2855.0720 without restraints) Performing minimization step: 72. Total energy = 2856.4355 kcal/mol (2849.2317 without restraints) Performing minimization step: 73. Total energy = 2850.6167 kcal/mol (2843.4164 without restraints) Performing minimization step: 74. Total energy = 2844.8228 kcal/mol (2837.6261 without restraints) Performing minimization step: 75. Total energy = 2839.0544 kcal/mol (2831.8613 without restraints) Performing minimization step: 76. Total energy = 2833.3107 kcal/mol (2826.1210 without restraints) Performing minimization step: 77. Total energy = 2827.5917 kcal/mol (2820.4056 without restraints) Performing minimization step: 78. Total energy = 2821.8974 kcal/mol (2814.7148 without restraints) Performing minimization step: 79. Total energy = 2816.2280 kcal/mol (2809.0489 without restraints) Performing minimization step: 80. Total energy = 2810.5835 kcal/mol (2803.4080 without restraints) Performing minimization step: 81. Total energy = 2804.9635 kcal/mol (2797.7914 without restraints) Performing minimization step: 82. Total energy = 2799.3679 kcal/mol (2792.1992 without restraints) Performing minimization step: 83. Total energy = 2793.7968 kcal/mol (2786.6316 without restraints) Performing minimization step: 84. Total energy = 2788.2503 kcal/mol (2781.0887 without restraints) Performing minimization step: 85. Total energy = 2782.7284 kcal/mol (2775.5702 without restraints) Performing minimization step: 86. Total energy = 2777.2307 kcal/mol (2770.0760 without restraints) Performing minimization step: 87. Total energy = 2771.7566 kcal/mol (2764.6054 without restraints) Performing minimization step: 88. Total energy = 2766.3074 kcal/mol (2759.1597 without restraints) Performing minimization step: 89. Total energy = 2760.8821 kcal/mol (2753.7378 without restraints) Performing minimization step: 90. Total energy = 2755.4811 kcal/mol (2748.3403 without restraints) Performing minimization step: 91. Total energy = 2750.1042 kcal/mol (2742.9669 without restraints) Performing minimization step: 92. Total energy = 2744.7514 kcal/mol (2737.6175 without restraints) Performing minimization step: 93. Total energy = 2739.4225 kcal/mol (2732.2920 without restraints) Performing minimization step: 94. Total energy = 2734.1173 kcal/mol (2726.9903 without restraints) Performing minimization step: 95. Total energy = 2728.8360 kcal/mol (2721.7124 without restraints) Performing minimization step: 96. Total energy = 2723.5778 kcal/mol (2716.4576 without restraints) Performing minimization step: 97. Total energy = 2718.3437 kcal/mol (2711.2270 without restraints) Performing minimization step: 98. Total energy = 2713.1331 kcal/mol (2706.0198 without restraints) Performing minimization step: 99. Total energy = 2707.9464 kcal/mol (2700.8363 without restraints) Performing minimization step: 100. Total energy = 2702.7830 kcal/mol (2695.6765 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/f42e8b68/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 101. Total energy = 2697.6433 kcal/mol (2690.5402 without restraints) Performing minimization step: 102. Total energy = 2692.5269 kcal/mol (2685.4272 without restraints) Performing minimization step: 103. Total energy = 2687.4339 kcal/mol (2680.3376 without restraints) Performing minimization step: 104. Total energy = 2682.3639 kcal/mol (2675.2710 without restraints) Performing minimization step: 105. Total energy = 2677.3173 kcal/mol (2670.2278 without restraints) Performing minimization step: 106. Total energy = 2672.2938 kcal/mol (2665.2077 without restraints) Performing minimization step: 107. Total energy = 2667.2932 kcal/mol (2660.2104 without restraints) Performing minimization step: 108. Total energy = 2662.3158 kcal/mol (2655.2363 without restraints) Performing minimization step: 109. Total energy = 2657.3610 kcal/mol (2650.2850 without restraints) Performing minimization step: 110. Total energy = 2652.4294 kcal/mol (2645.3567 without restraints) Performing minimization step: 111. Total energy = 2647.5207 kcal/mol (2640.4514 without restraints) Performing minimization step: 112. Total energy = 2642.6344 kcal/mol (2635.5681 without restraints) Performing minimization step: 113. Total energy = 2637.7707 kcal/mol (2630.7080 without restraints) Performing minimization step: 114. Total energy = 2632.9300 kcal/mol (2625.8707 without restraints) Performing minimization step: 115. Total energy = 2628.1117 kcal/mol (2621.0557 without restraints) Performing minimization step: 116. Total energy = 2623.3165 kcal/mol (2616.2638 without restraints) Performing minimization step: 117. Total energy = 2618.5430 kcal/mol (2611.4936 without restraints) Performing minimization step: 118. Total energy = 2613.7916 kcal/mol (2606.7456 without restraints) Performing minimization step: 119. Total energy = 2609.0627 kcal/mol (2602.0199 without restraints) Performing minimization step: 120. Total energy = 2604.3560 kcal/mol (2597.3165 without restraints) Performing minimization step: 121. Total energy = 2599.6714 kcal/mol (2592.6353 without restraints) Performing minimization step: 122. Total energy = 2595.0089 kcal/mol (2587.9760 without restraints) Performing minimization step: 123. Total energy = 2590.3682 kcal/mol (2583.3385 without restraints) Performing minimization step: 124. Total energy = 2585.7496 kcal/mol (2578.7232 without restraints) Performing minimization step: 125. Total energy = 2581.1526 kcal/mol (2574.1296 without restraints) Performing minimization step: 126. Total energy = 2576.5776 kcal/mol (2569.5578 without restraints) Performing minimization step: 127. Total energy = 2572.0245 kcal/mol (2565.0080 without restraints) Performing minimization step: 128. Total energy = 2567.4929 kcal/mol (2560.4796 without restraints) Performing minimization step: 129. Total energy = 2562.9828 kcal/mol (2555.9728 without restraints) Performing minimization step: 130. Total energy = 2558.4940 kcal/mol (2551.4872 without restraints) Performing minimization step: 131. Total energy = 2554.0265 kcal/mol (2547.0230 without restraints) Performing minimization step: 132. Total energy = 2549.5807 kcal/mol (2542.5804 without restraints) Performing minimization step: 133. Total energy = 2545.1561 kcal/mol (2538.1590 without restraints) Performing minimization step: 134. Total energy = 2540.7528 kcal/mol (2533.7589 without restraints) Performing minimization step: 135. Total energy = 2536.3705 kcal/mol (2529.3799 without restraints) Performing minimization step: 136. Total energy = 2532.0092 kcal/mol (2525.0216 without restraints) Performing minimization step: 137. Total energy = 2527.6689 kcal/mol (2520.6846 without restraints) Performing minimization step: 138. Total energy = 2523.3494 kcal/mol (2516.3684 without restraints) Performing minimization step: 139. Total energy = 2519.0510 kcal/mol (2512.0731 without restraints) Performing minimization step: 140. Total energy = 2514.7733 kcal/mol (2507.7986 without restraints) Performing minimization step: 141. Total energy = 2510.5163 kcal/mol (2503.5448 without restraints) Performing minimization step: 142. Total energy = 2506.2802 kcal/mol (2499.3118 without restraints) Performing minimization step: 143. Total energy = 2502.0643 kcal/mol (2495.0991 without restraints) Performing minimization step: 144. Total energy = 2497.8690 kcal/mol (2490.9069 without restraints) Performing minimization step: 145. Total energy = 2493.6940 kcal/mol (2486.7352 without restraints) Performing minimization step: 146. Total energy = 2489.5394 kcal/mol (2482.5837 without restraints) Performing minimization step: 147. Total energy = 2485.4049 kcal/mol (2478.4523 without restraints) Performing minimization step: 148. Total energy = 2481.2906 kcal/mol (2474.3411 without restraints) Performing minimization step: 149. Total energy = 2477.1964 kcal/mol (2470.2500 without restraints) Performing minimization step: 150. Total energy = 2473.1222 kcal/mol (2466.1791 without restraints) Performing minimization step: 151. Total energy = 2469.0681 kcal/mol (2462.1280 without restraints) Performing minimization step: 152. Total energy = 2465.0337 kcal/mol (2458.0967 without restraints) Performing minimization step: 153. Total energy = 2461.0190 kcal/mol (2454.0851 without restraints) Performing minimization step: 154. Total energy = 2457.0241 kcal/mol (2450.0933 without restraints) Performing minimization step: 155. Total energy = 2453.0487 kcal/mol (2446.1210 without restraints) Performing minimization step: 156. Total energy = 2449.0929 kcal/mol (2442.1682 without restraints) Performing minimization step: 157. Total energy = 2445.1564 kcal/mol (2438.2348 without restraints) Performing minimization step: 158. Total energy = 2441.2394 kcal/mol (2434.3209 without restraints) Performing minimization step: 159. Total energy = 2437.3415 kcal/mol (2430.4260 without restraints) Performing minimization step: 160. Total energy = 2433.4630 kcal/mol (2426.5507 without restraints) Performing minimization step: 161. Total energy = 2429.6038 kcal/mol (2422.6944 without restraints) Performing minimization step: 162. Total energy = 2425.7635 kcal/mol (2418.8572 without restraints) Performing minimization step: 163. Total energy = 2421.9422 kcal/mol (2415.0391 without restraints) Performing minimization step: 164. Total energy = 2418.1399 kcal/mol (2411.2396 without restraints) Performing minimization step: 165. Total energy = 2414.3561 kcal/mol (2407.4589 without restraints) Performing minimization step: 166. Total energy = 2410.5911 kcal/mol (2403.6969 without restraints) Performing minimization step: 167. Total energy = 2406.8446 kcal/mol (2399.9534 without restraints) Performing minimization step: 168. Total energy = 2403.1169 kcal/mol (2396.2287 without restraints) Performing minimization step: 169. Total energy = 2399.4078 kcal/mol (2392.5226 without restraints) Performing minimization step: 170. Total energy = 2395.7170 kcal/mol (2388.8348 without restraints) Performing minimization step: 171. Total energy = 2392.0445 kcal/mol (2385.1653 without restraints) Performing minimization step: 172. Total energy = 2388.3904 kcal/mol (2381.5141 without restraints) Performing minimization step: 173. Total energy = 2384.7547 kcal/mol (2377.8814 without restraints) Performing minimization step: 174. Total energy = 2381.1367 kcal/mol (2374.2664 without restraints) Performing minimization step: 175. Total energy = 2377.5367 kcal/mol (2370.6693 without restraints) Performing minimization step: 176. Total energy = 2373.9546 kcal/mol (2367.0902 without restraints) Performing minimization step: 177. Total energy = 2370.3903 kcal/mol (2363.5289 without restraints) Performing minimization step: 178. Total energy = 2366.8438 kcal/mol (2359.9853 without restraints) Performing minimization step: 179. Total energy = 2363.3149 kcal/mol (2356.4593 without restraints) Performing minimization step: 180. Total energy = 2359.8037 kcal/mol (2352.9510 without restraints) Performing minimization step: 181. Total energy = 2356.3099 kcal/mol (2349.4601 without restraints) Performing minimization step: 182. Total energy = 2352.8334 kcal/mol (2345.9866 without restraints) Performing minimization step: 183. Total energy = 2349.3741 kcal/mol (2342.5302 without restraints) Performing minimization step: 184. Total energy = 2345.9323 kcal/mol (2339.0912 without restraints) Performing minimization step: 185. Total energy = 2342.5075 kcal/mol (2335.6693 without restraints) Performing minimization step: 186. Total energy = 2339.0999 kcal/mol (2332.2646 without restraints) Performing minimization step: 187. Total energy = 2335.7092 kcal/mol (2328.8767 without restraints) Performing minimization step: 188. Total energy = 2332.3354 kcal/mol (2325.5058 without restraints) Performing minimization step: 189. Total energy = 2328.9786 kcal/mol (2322.1520 without restraints) Performing minimization step: 190. Total energy = 2325.6386 kcal/mol (2318.8148 without restraints) Performing minimization step: 191. Total energy = 2322.3150 kcal/mol (2315.4940 without restraints) Performing minimization step: 192. Total energy = 2319.0077 kcal/mol (2312.1895 without restraints) Performing minimization step: 193. Total energy = 2315.7171 kcal/mol (2308.9017 without restraints) Performing minimization step: 194. Total energy = 2312.4427 kcal/mol (2305.6303 without restraints) Performing minimization step: 195. Total energy = 2309.1849 kcal/mol (2302.3752 without restraints) Performing minimization step: 196. Total energy = 2305.9437 kcal/mol (2299.1369 without restraints) Performing minimization step: 197. Total energy = 2302.7182 kcal/mol (2295.9141 without restraints) Performing minimization step: 198. Total energy = 2299.5086 kcal/mol (2292.7074 without restraints) Performing minimization step: 199. Total energy = 2296.3150 kcal/mol (2289.5165 without restraints) Performing minimization step: 200. Total energy = 2293.1369 kcal/mol (2286.3410 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/f42e8b68/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 201. Total energy = 2289.9747 kcal/mol (2283.1818 without restraints) Performing minimization step: 202. Total energy = 2286.8284 kcal/mol (2280.0382 without restraints) Performing minimization step: 203. Total energy = 2283.6975 kcal/mol (2276.9101 without restraints) Performing minimization step: 204. Total energy = 2280.5823 kcal/mol (2273.7976 without restraints) Performing minimization step: 205. Total energy = 2277.4825 kcal/mol (2270.7006 without restraints) Performing minimization step: 206. Total energy = 2274.3981 kcal/mol (2267.6190 without restraints) Performing minimization step: 207. Total energy = 2271.3289 kcal/mol (2264.5525 without restraints) Performing minimization step: 208. Total energy = 2268.2749 kcal/mol (2261.5013 without restraints) Performing minimization step: 209. Total energy = 2265.2360 kcal/mol (2258.4651 without restraints) Performing minimization step: 210. Total energy = 2262.2121 kcal/mol (2255.4438 without restraints) Performing minimization step: 211. Total energy = 2259.2030 kcal/mol (2252.4375 without restraints) Performing minimization step: 212. Total energy = 2256.2088 kcal/mol (2249.4460 without restraints) Performing minimization step: 213. Total energy = 2253.2292 kcal/mol (2246.4690 without restraints) Performing minimization step: 214. Total energy = 2250.2643 kcal/mol (2243.5069 without restraints) Performing minimization step: 215. Total energy = 2247.3142 kcal/mol (2240.5594 without restraints) Performing minimization step: 216. Total energy = 2244.3782 kcal/mol (2237.6262 without restraints) Performing minimization step: 217. Total energy = 2241.4569 kcal/mol (2234.7075 without restraints) Performing minimization step: 218. Total energy = 2238.5500 kcal/mol (2231.8033 without restraints) Performing minimization step: 219. Total energy = 2235.6571 kcal/mol (2228.9131 without restraints) Performing minimization step: 220. Total energy = 2232.7784 kcal/mol (2226.0369 without restraints) Performing minimization step: 221. Total energy = 2229.9137 kcal/mol (2223.1749 without restraints) Performing minimization step: 222. Total energy = 2227.0630 kcal/mol (2220.3268 without restraints) Performing minimization step: 223. Total energy = 2224.2262 kcal/mol (2217.4926 without restraints) Performing minimization step: 224. Total energy = 2221.4031 kcal/mol (2214.6722 without restraints) Performing minimization step: 225. Total energy = 2218.5938 kcal/mol (2211.8655 without restraints) Performing minimization step: 226. Total energy = 2215.7981 kcal/mol (2209.0724 without restraints) Performing minimization step: 227. Total energy = 2213.0160 kcal/mol (2206.2929 without restraints) Performing minimization step: 228. Total energy = 2210.2473 kcal/mol (2203.5268 without restraints) Performing minimization step: 229. Total energy = 2207.4923 kcal/mol (2200.7744 without restraints) Performing minimization step: 230. Total energy = 2204.7502 kcal/mol (2198.0349 without restraints) Performing minimization step: 231. Total energy = 2202.0212 kcal/mol (2195.3085 without restraints) Performing minimization step: 232. Total energy = 2199.3055 kcal/mol (2192.5953 without restraints) Performing minimization step: 233. Total energy = 2196.6028 kcal/mol (2189.8951 without restraints) Performing minimization step: 234. Total energy = 2193.9130 kcal/mol (2187.2080 without restraints) Performing minimization step: 235. Total energy = 2191.2361 kcal/mol (2184.5336 without restraints) Performing minimization step: 236. Total energy = 2188.5721 kcal/mol (2181.8721 without restraints) Performing minimization step: 237. Total energy = 2185.9207 kcal/mol (2179.2233 without restraints) Performing minimization step: 238. Total energy = 2183.2820 kcal/mol (2176.5871 without restraints) Performing minimization step: 239. Total energy = 2180.6558 kcal/mol (2173.9635 without restraints) Performing minimization step: 240. Total energy = 2178.0423 kcal/mol (2171.3525 without restraints) Performing minimization step: 241. Total energy = 2175.4410 kcal/mol (2168.7537 without restraints) Performing minimization step: 242. Total energy = 2172.8520 kcal/mol (2166.1671 without restraints) Performing minimization step: 243. Total energy = 2170.2751 kcal/mol (2163.5928 without restraints) Performing minimization step: 244. Total energy = 2167.7105 kcal/mol (2161.0306 without restraints) Performing minimization step: 245. Total energy = 2165.1581 kcal/mol (2158.4807 without restraints) Performing minimization step: 246. Total energy = 2162.6172 kcal/mol (2155.9424 without restraints) Performing minimization step: 247. Total energy = 2160.0886 kcal/mol (2153.4162 without restraints) Performing minimization step: 248. Total energy = 2157.5717 kcal/mol (2150.9018 without restraints) Performing minimization step: 249. Total energy = 2155.0663 kcal/mol (2148.3990 without restraints) Performing minimization step: 250. Total energy = 2152.5733 kcal/mol (2145.9083 without restraints) Performing minimization step: 251. Total energy = 2150.0916 kcal/mol (2143.4291 without restraints) Performing minimization step: 252. Total energy = 2147.6212 kcal/mol (2140.9612 without restraints) Performing minimization step: 253. Total energy = 2145.1623 kcal/mol (2138.5047 without restraints) Performing minimization step: 254. Total energy = 2142.7149 kcal/mol (2136.0597 without restraints) Performing minimization step: 255. Total energy = 2140.2785 kcal/mol (2133.6258 without restraints) Performing minimization step: 256. Total energy = 2137.8535 kcal/mol (2131.2032 without restraints) Performing minimization step: 257. Total energy = 2135.4395 kcal/mol (2128.7916 without restraints) Performing minimization step: 258. Total energy = 2133.0365 kcal/mol (2126.3911 without restraints) Performing minimization step: 259. Total energy = 2130.6450 kcal/mol (2124.0019 without restraints) Performing minimization step: 260. Total energy = 2128.2639 kcal/mol (2121.6233 without restraints) Performing minimization step: 261. Total energy = 2125.8934 kcal/mol (2119.2552 without restraints) Performing minimization step: 262. Total energy = 2123.5340 kcal/mol (2116.8981 without restraints) Performing minimization step: 263. Total energy = 2121.1852 kcal/mol (2114.5518 without restraints) Performing minimization step: 264. Total energy = 2118.8471 kcal/mol (2112.2160 without restraints) Performing minimization step: 265. Total energy = 2116.5195 kcal/mol (2109.8908 without restraints) Performing minimization step: 266. Total energy = 2114.2023 kcal/mol (2107.5760 without restraints) Performing minimization step: 267. Total energy = 2111.8958 kcal/mol (2105.2718 without restraints) Performing minimization step: 268. Total energy = 2109.5994 kcal/mol (2102.9778 without restraints) Performing minimization step: 269. Total energy = 2107.3129 kcal/mol (2100.6937 without restraints) Performing minimization step: 270. Total energy = 2105.0368 kcal/mol (2098.4199 without restraints) Performing minimization step: 271. Total energy = 2102.7709 kcal/mol (2096.1565 without restraints) Performing minimization step: 272. Total energy = 2100.5152 kcal/mol (2093.9031 without restraints) Performing minimization step: 273. Total energy = 2098.2697 kcal/mol (2091.6599 without restraints) Performing minimization step: 274. Total energy = 2096.0338 kcal/mol (2089.4264 without restraints) Performing minimization step: 275. Total energy = 2093.8079 kcal/mol (2087.2029 without restraints) Performing minimization step: 276. Total energy = 2091.5916 kcal/mol (2084.9888 without restraints) Performing minimization step: 277. Total energy = 2089.3851 kcal/mol (2082.7847 without restraints) Performing minimization step: 278. Total energy = 2087.1885 kcal/mol (2080.5904 without restraints) Performing minimization step: 279. Total energy = 2085.0012 kcal/mol (2078.4054 without restraints) Performing minimization step: 280. Total energy = 2082.8235 kcal/mol (2076.2301 without restraints) Performing minimization step: 281. Total energy = 2080.6553 kcal/mol (2074.0642 without restraints) Performing minimization step: 282. Total energy = 2078.4963 kcal/mol (2071.9074 without restraints) Performing minimization step: 283. Total energy = 2076.3465 kcal/mol (2069.7600 without restraints) Performing minimization step: 284. Total energy = 2074.2064 kcal/mol (2067.6222 without restraints) Performing minimization step: 285. Total energy = 2072.0756 kcal/mol (2065.4935 without restraints) Performing minimization step: 286. Total energy = 2069.9537 kcal/mol (2063.3740 without restraints) Performing minimization step: 287. Total energy = 2067.8411 kcal/mol (2061.2637 without restraints) Performing minimization step: 288. Total energy = 2065.7374 kcal/mol (2059.1624 without restraints) Performing minimization step: 289. Total energy = 2063.6428 kcal/mol (2057.0700 without restraints) Performing minimization step: 290. Total energy = 2061.5570 kcal/mol (2054.9864 without restraints) Performing minimization step: 291. Total energy = 2059.4801 kcal/mol (2052.9118 without restraints) Performing minimization step: 292. Total energy = 2057.4120 kcal/mol (2050.8460 without restraints) Performing minimization step: 293. Total energy = 2055.3526 kcal/mol (2048.7889 without restraints) Performing minimization step: 294. Total energy = 2053.3020 kcal/mol (2046.7405 without restraints) Performing minimization step: 295. Total energy = 2051.2598 kcal/mol (2044.7006 without restraints) Performing minimization step: 296. Total energy = 2049.2261 kcal/mol (2042.6692 without restraints) Performing minimization step: 297. Total energy = 2047.2014 kcal/mol (2040.6467 without restraints) Performing minimization step: 298. Total energy = 2045.1849 kcal/mol (2038.6325 without restraints) Performing minimization step: 299. Total energy = 2043.1767 kcal/mol (2036.6263 without restraints) Performing minimization step: 300. Total energy = 2041.1768 kcal/mol (2034.6289 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/f42e8b68/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 301. Total energy = 2039.1856 kcal/mol (2032.6400 without restraints) Performing minimization step: 302. Total energy = 2037.2025 kcal/mol (2030.6591 without restraints) Performing minimization step: 303. Total energy = 2035.2280 kcal/mol (2028.6868 without restraints) Performing minimization step: 304. Total energy = 2033.2614 kcal/mol (2026.7225 without restraints) Performing minimization step: 305. Total energy = 2031.3027 kcal/mol (2024.7660 without restraints) Performing minimization step: 306. Total energy = 2029.3521 kcal/mol (2022.8176 without restraints) Performing minimization step: 307. Total energy = 2027.4095 kcal/mol (2020.8773 without restraints) Performing minimization step: 308. Total energy = 2025.4749 kcal/mol (2018.9449 without restraints) Performing minimization step: 309. Total energy = 2023.5482 kcal/mol (2017.0204 without restraints) Performing minimization step: 310. Total energy = 2021.6292 kcal/mol (2015.1036 without restraints) Performing minimization step: 311. Total energy = 2019.7181 kcal/mol (2013.1948 without restraints) Performing minimization step: 312. Total energy = 2017.8149 kcal/mol (2011.2938 without restraints) Performing minimization step: 313. Total energy = 2015.9193 kcal/mol (2009.4004 without restraints) Performing minimization step: 314. Total energy = 2014.0314 kcal/mol (2007.5148 without restraints) Performing minimization step: 315. Total energy = 2012.1512 kcal/mol (2005.6367 without restraints) Performing minimization step: 316. Total energy = 2010.2785 kcal/mol (2003.7662 without restraints) Performing minimization step: 317. Total energy = 2008.4133 kcal/mol (2001.9033 without restraints) Performing minimization step: 318. Total energy = 2006.5558 kcal/mol (2000.0481 without restraints) Performing minimization step: 319. Total energy = 2004.7057 kcal/mol (1998.2000 without restraints) Performing minimization step: 320. Total energy = 2002.8628 kcal/mol (1996.3594 without restraints) Performing minimization step: 321. Total energy = 2001.0273 kcal/mol (1994.5261 without restraints) Performing minimization step: 322. Total energy = 1999.1992 kcal/mol (1992.7002 without restraints) Performing minimization step: 323. Total energy = 1997.3786 kcal/mol (1990.8818 without restraints) Performing minimization step: 324. Total energy = 1995.5648 kcal/mol (1989.0700 without restraints) Performing minimization step: 325. Total energy = 1993.7582 kcal/mol (1987.2655 without restraints) Performing minimization step: 326. Total energy = 1991.9587 kcal/mol (1985.4685 without restraints) Performing minimization step: 327. Total energy = 1990.1668 kcal/mol (1983.6788 without restraints) Performing minimization step: 328. Total energy = 1988.3824 kcal/mol (1981.8965 without restraints) Performing minimization step: 329. Total energy = 1986.6043 kcal/mol (1980.1207 without restraints) Performing minimization step: 330. Total energy = 1984.8333 kcal/mol (1978.3518 without restraints) Performing minimization step: 331. Total energy = 1983.0692 kcal/mol (1976.5900 without restraints) Performing minimization step: 332. Total energy = 1981.3121 kcal/mol (1974.8350 without restraints) Performing minimization step: 333. Total energy = 1979.5618 kcal/mol (1973.0870 without restraints) Performing minimization step: 334. Total energy = 1977.8184 kcal/mol (1971.3457 without restraints) Performing minimization step: 335. Total energy = 1976.0818 kcal/mol (1969.6113 without restraints) Performing minimization step: 336. Total energy = 1974.3520 kcal/mol (1967.8837 without restraints) Performing minimization step: 337. Total energy = 1972.6286 kcal/mol (1966.1625 without restraints) Performing minimization step: 338. Total energy = 1970.9123 kcal/mol (1964.4483 without restraints) Performing minimization step: 339. Total energy = 1969.2024 kcal/mol (1962.7406 without restraints) Performing minimization step: 340. Total energy = 1967.4995 kcal/mol (1961.0399 without restraints) Performing minimization step: 341. Total energy = 1965.8032 kcal/mol (1959.3459 without restraints) Performing minimization step: 342. Total energy = 1964.1136 kcal/mol (1957.6584 without restraints) Performing minimization step: 343. Total energy = 1962.4300 kcal/mol (1955.9770 without restraints) Performing minimization step: 344. Total energy = 1960.7530 kcal/mol (1954.3021 without restraints) Performing minimization step: 345. Total energy = 1959.0825 kcal/mol (1952.6339 without restraints) Performing minimization step: 346. Total energy = 1957.4186 kcal/mol (1950.9721 without restraints) Performing minimization step: 347. Total energy = 1955.7609 kcal/mol (1949.3165 without restraints) Performing minimization step: 348. Total energy = 1954.1092 kcal/mol (1947.6671 without restraints) Performing minimization step: 349. Total energy = 1952.4644 kcal/mol (1946.0245 without restraints) Performing minimization step: 350. Total energy = 1950.8260 kcal/mol (1944.3882 without restraints) Performing minimization step: 351. Total energy = 1949.1938 kcal/mol (1942.7582 without restraints) Performing minimization step: 352. Total energy = 1947.5680 kcal/mol (1941.1347 without restraints) Performing minimization step: 353. Total energy = 1945.9484 kcal/mol (1939.5172 without restraints) Performing minimization step: 354. Total energy = 1944.3351 kcal/mol (1937.9061 without restraints) Performing minimization step: 355. Total energy = 1942.7278 kcal/mol (1936.3010 without restraints) Performing minimization step: 356. Total energy = 1941.1265 kcal/mol (1934.7019 without restraints) Performing minimization step: 357. Total energy = 1939.5316 kcal/mol (1933.1091 without restraints) Performing minimization step: 358. Total energy = 1937.9428 kcal/mol (1931.5225 without restraints) Performing minimization step: 359. Total energy = 1936.3598 kcal/mol (1929.9417 without restraints) Performing minimization step: 360. Total energy = 1934.7830 kcal/mol (1928.3671 without restraints) Performing minimization step: 361. Total energy = 1933.2121 kcal/mol (1926.7983 without restraints) Performing minimization step: 362. Total energy = 1931.6470 kcal/mol (1925.2355 without restraints) Performing minimization step: 363. Total energy = 1930.0880 kcal/mol (1923.6786 without restraints) Performing minimization step: 364. Total energy = 1928.5348 kcal/mol (1922.1277 without restraints) Performing minimization step: 365. Total energy = 1926.9874 kcal/mol (1920.5825 without restraints) Performing minimization step: 366. Total energy = 1925.4460 kcal/mol (1919.0432 without restraints) Performing minimization step: 367. Total energy = 1923.9107 kcal/mol (1917.5101 without restraints) Performing minimization step: 368. Total energy = 1922.3810 kcal/mol (1915.9826 without restraints) Performing minimization step: 369. Total energy = 1920.8571 kcal/mol (1914.4608 without restraints) Performing minimization step: 370. Total energy = 1919.3389 kcal/mol (1912.9449 without restraints) Performing minimization step: 371. Total energy = 1917.8265 kcal/mol (1911.4346 without restraints) Performing minimization step: 372. Total energy = 1916.3198 kcal/mol (1909.9301 without restraints) Performing minimization step: 373. Total energy = 1914.8190 kcal/mol (1908.4315 without restraints) Performing minimization step: 374. Total energy = 1913.3236 kcal/mol (1906.9384 without restraints) Performing minimization step: 375. Total energy = 1911.8342 kcal/mol (1905.4511 without restraints) Performing minimization step: 376. Total energy = 1910.3503 kcal/mol (1903.9695 without restraints) Performing minimization step: 377. Total energy = 1908.8719 kcal/mol (1902.4933 without restraints) Performing minimization step: 378. Total energy = 1907.3990 kcal/mol (1901.0225 without restraints) Performing minimization step: 379. Total energy = 1905.9316 kcal/mol (1899.5573 without restraints) Performing minimization step: 380. Total energy = 1904.4700 kcal/mol (1898.0979 without restraints) Performing minimization step: 381. Total energy = 1903.0137 kcal/mol (1896.6438 without restraints) Performing minimization step: 382. Total energy = 1901.5628 kcal/mol (1895.1951 without restraints) Performing minimization step: 383. Total energy = 1900.1174 kcal/mol (1893.7520 without restraints) Performing minimization step: 384. Total energy = 1898.6773 kcal/mol (1892.3140 without restraints) Performing minimization step: 385. Total energy = 1897.2426 kcal/mol (1890.8815 without restraints) Performing minimization step: 386. Total energy = 1895.8134 kcal/mol (1889.4546 without restraints) Performing minimization step: 387. Total energy = 1894.3895 kcal/mol (1888.0330 without restraints) Performing minimization step: 388. Total energy = 1892.9712 kcal/mol (1886.6167 without restraints) Performing minimization step: 389. Total energy = 1891.5579 kcal/mol (1885.2057 without restraints) Performing minimization step: 390. Total energy = 1890.1501 kcal/mol (1883.8001 without restraints) Performing minimization step: 391. Total energy = 1888.7475 kcal/mol (1882.3997 without restraints) Performing minimization step: 392. Total energy = 1887.3506 kcal/mol (1881.0050 without restraints) Performing minimization step: 393. Total energy = 1885.9587 kcal/mol (1879.6153 without restraints) Performing minimization step: 394. Total energy = 1884.5724 kcal/mol (1878.2313 without restraints) Performing minimization step: 395. Total energy = 1883.1909 kcal/mol (1876.8520 without restraints) Performing minimization step: 396. Total energy = 1881.8146 kcal/mol (1875.4779 without restraints) Performing minimization step: 397. Total energy = 1880.4435 kcal/mol (1874.1090 without restraints) Performing minimization step: 398. Total energy = 1879.0777 kcal/mol (1872.7455 without restraints) Performing minimization step: 399. Total energy = 1877.7169 kcal/mol (1871.3869 without restraints) Performing minimization step: 400. Total energy = 1876.3611 kcal/mol (1870.0333 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/f42e8b68/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 401. Total energy = 1875.0105 kcal/mol (1868.6850 without restraints) Performing minimization step: 402. Total energy = 1873.6650 kcal/mol (1867.3416 without restraints) Performing minimization step: 403. Total energy = 1872.3245 kcal/mol (1866.0034 without restraints) Performing minimization step: 404. Total energy = 1870.9888 kcal/mol (1864.6698 without restraints) Performing minimization step: 405. Total energy = 1869.6582 kcal/mol (1863.3416 without restraints) Performing minimization step: 406. Total energy = 1868.3328 kcal/mol (1862.0184 without restraints) Performing minimization step: 407. Total energy = 1867.0123 kcal/mol (1860.7002 without restraints) Performing minimization step: 408. Total energy = 1865.6969 kcal/mol (1859.3870 without restraints) Performing minimization step: 409. Total energy = 1864.3865 kcal/mol (1858.0789 without restraints) Performing minimization step: 410. Total energy = 1863.0818 kcal/mol (1856.7766 without restraints) Performing minimization step: 411. Total energy = 1861.7813 kcal/mol (1855.4782 without restraints) Performing minimization step: 412. Total energy = 1860.4858 kcal/mol (1854.1849 without restraints) Performing minimization step: 413. Total energy = 1859.1951 kcal/mol (1852.8965 without restraints) Performing minimization step: 414. Total energy = 1857.9095 kcal/mol (1851.6135 without restraints) Performing minimization step: 415. Total energy = 1856.6289 kcal/mol (1850.3348 without restraints) Performing minimization step: 416. Total energy = 1855.3527 kcal/mol (1849.0609 without restraints) Performing minimization step: 417. Total energy = 1854.0811 kcal/mol (1847.7914 without restraints) Performing minimization step: 418. Total energy = 1852.8147 kcal/mol (1846.5274 without restraints) Performing minimization step: 419. Total energy = 1851.5527 kcal/mol (1845.2677 without restraints) Performing minimization step: 420. Total energy = 1850.2953 kcal/mol (1844.0125 without restraints) Performing minimization step: 421. Total energy = 1849.0430 kcal/mol (1842.7625 without restraints) Performing minimization step: 422. Total energy = 1847.7952 kcal/mol (1841.5170 without restraints) Performing minimization step: 423. Total energy = 1846.5522 kcal/mol (1840.2762 without restraints) Performing minimization step: 424. Total energy = 1845.3134 kcal/mol (1839.0396 without restraints) Performing minimization step: 425. Total energy = 1844.0799 kcal/mol (1837.8085 without restraints) Performing minimization step: 426. Total energy = 1842.8509 kcal/mol (1836.5818 without restraints) Performing minimization step: 427. Total energy = 1841.6266 kcal/mol (1835.3597 without restraints) Performing minimization step: 428. Total energy = 1840.4068 kcal/mol (1834.1422 without restraints) Performing minimization step: 429. Total energy = 1839.1914 kcal/mol (1832.9291 without restraints) Performing minimization step: 430. Total energy = 1837.9809 kcal/mol (1831.7209 without restraints) Performing minimization step: 431. Total energy = 1836.7749 kcal/mol (1830.5172 without restraints) Performing minimization step: 432. Total energy = 1835.5735 kcal/mol (1829.3180 without restraints) Performing minimization step: 433. Total energy = 1834.3766 kcal/mol (1828.1235 without restraints) Performing minimization step: 434. Total energy = 1833.1845 kcal/mol (1826.9337 without restraints) Performing minimization step: 435. Total energy = 1831.9965 kcal/mol (1825.7479 without restraints) Performing minimization step: 436. Total energy = 1830.8131 kcal/mol (1824.5670 without restraints) Performing minimization step: 437. Total energy = 1829.6344 kcal/mol (1823.3905 without restraints) Performing minimization step: 438. Total energy = 1828.4602 kcal/mol (1822.2187 without restraints) Performing minimization step: 439. Total energy = 1827.2905 kcal/mol (1821.0513 without restraints) Performing minimization step: 440. Total energy = 1826.1250 kcal/mol (1819.8881 without restraints) Performing minimization step: 441. Total energy = 1824.9640 kcal/mol (1818.7295 without restraints) Performing minimization step: 442. Total energy = 1823.8075 kcal/mol (1817.5752 without restraints) Performing minimization step: 443. Total energy = 1822.6553 kcal/mol (1816.4254 without restraints) Performing minimization step: 444. Total energy = 1821.5075 kcal/mol (1815.2800 without restraints) Performing minimization step: 445. Total energy = 1820.3644 kcal/mol (1814.1391 without restraints) Performing minimization step: 446. Total energy = 1819.2253 kcal/mol (1813.0024 without restraints) Performing minimization step: 447. Total energy = 1818.0907 kcal/mol (1811.8701 without restraints) Performing minimization step: 448. Total energy = 1816.9603 kcal/mol (1810.7421 without restraints) Performing minimization step: 449. Total energy = 1815.8345 kcal/mol (1809.6186 without restraints) Performing minimization step: 450. Total energy = 1814.7127 kcal/mol (1808.4991 without restraints) Performing minimization step: 451. Total energy = 1813.5952 kcal/mol (1807.3840 without restraints) Performing minimization step: 452. Total energy = 1812.4822 kcal/mol (1806.2733 without restraints) Performing minimization step: 453. Total energy = 1811.3732 kcal/mol (1805.1667 without restraints) Performing minimization step: 454. Total energy = 1810.2685 kcal/mol (1804.0643 without restraints) Performing minimization step: 455. Total energy = 1809.1679 kcal/mol (1802.9662 without restraints) Performing minimization step: 456. Total energy = 1808.0717 kcal/mol (1801.8722 without restraints) Performing minimization step: 457. Total energy = 1806.9796 kcal/mol (1800.7825 without restraints) Performing minimization step: 458. Total energy = 1805.8915 kcal/mol (1799.6968 without restraints) Performing minimization step: 459. Total energy = 1804.8077 kcal/mol (1798.6154 without restraints) Performing minimization step: 460. Total energy = 1803.7283 kcal/mol (1797.5383 without restraints) Performing minimization step: 461. Total energy = 1802.6527 kcal/mol (1796.4652 without restraints) Performing minimization step: 462. Total energy = 1801.5816 kcal/mol (1795.3964 without restraints) Performing minimization step: 463. Total energy = 1800.5145 kcal/mol (1794.3317 without restraints) Performing minimization step: 464. Total energy = 1799.4513 kcal/mol (1793.2709 without restraints) Performing minimization step: 465. Total energy = 1798.3922 kcal/mol (1792.2142 without restraints) Performing minimization step: 466. Total energy = 1797.3372 kcal/mol (1791.1616 without restraints) Performing minimization step: 467. Total energy = 1796.2862 kcal/mol (1790.1129 without restraints) Performing minimization step: 468. Total energy = 1795.2392 kcal/mol (1789.0684 without restraints) Performing minimization step: 469. Total energy = 1794.1965 kcal/mol (1788.0280 without restraints) Performing minimization step: 470. Total energy = 1793.1576 kcal/mol (1786.9916 without restraints) Performing minimization step: 471. Total energy = 1792.1225 kcal/mol (1785.9589 without restraints) Performing minimization step: 472. Total energy = 1791.0916 kcal/mol (1784.9304 without restraints) Performing minimization step: 473. Total energy = 1790.0646 kcal/mol (1783.9058 without restraints) Performing minimization step: 474. Total energy = 1789.0416 kcal/mol (1782.8853 without restraints) Performing minimization step: 475. Total energy = 1788.0226 kcal/mol (1781.8687 without restraints) Performing minimization step: 476. Total energy = 1787.0076 kcal/mol (1780.8561 without restraints) Performing minimization step: 477. Total energy = 1785.9962 kcal/mol (1779.8471 without restraints) Performing minimization step: 478. Total energy = 1784.9889 kcal/mol (1778.8423 without restraints) Performing minimization step: 479. Total energy = 1783.9855 kcal/mol (1777.8413 without restraints) Performing minimization step: 480. Total energy = 1782.9859 kcal/mol (1776.8441 without restraints) Performing minimization step: 481. Total energy = 1781.9900 kcal/mol (1775.8506 without restraints) Performing minimization step: 482. Total energy = 1780.9980 kcal/mol (1774.8611 without restraints) Performing minimization step: 483. Total energy = 1780.0099 kcal/mol (1773.8753 without restraints) Performing minimization step: 484. Total energy = 1779.0256 kcal/mol (1772.8936 without restraints) Performing minimization step: 485. Total energy = 1778.0452 kcal/mol (1771.9156 without restraints) Performing minimization step: 486. Total energy = 1777.0685 kcal/mol (1770.9414 without restraints) Performing minimization step: 487. Total energy = 1776.0957 kcal/mol (1769.9711 without restraints) Performing minimization step: 488. Total energy = 1775.1267 kcal/mol (1769.0046 without restraints) Performing minimization step: 489. Total energy = 1774.1613 kcal/mol (1768.0416 without restraints) Performing minimization step: 490. Total energy = 1773.1996 kcal/mol (1767.0825 without restraints) Performing minimization step: 491. Total energy = 1772.2419 kcal/mol (1766.1271 without restraints) Performing minimization step: 492. Total energy = 1771.2878 kcal/mol (1765.1755 without restraints) Performing minimization step: 493. Total energy = 1770.3377 kcal/mol (1764.2279 without restraints) Performing minimization step: 494. Total energy = 1769.3911 kcal/mol (1763.2837 without restraints) Performing minimization step: 495. Total energy = 1768.4480 kcal/mol (1762.3432 without restraints) Performing minimization step: 496. Total energy = 1767.5087 kcal/mol (1761.4064 without restraints) Performing minimization step: 497. Total energy = 1766.5731 kcal/mol (1760.4732 without restraints) Performing minimization step: 498. Total energy = 1765.6410 kcal/mol (1759.5437 without restraints) Performing minimization step: 499. Total energy = 1764.7124 kcal/mol (1758.6176 without restraints) Performing minimization step: 500. Total energy = 1763.7874 kcal/mol (1757.6951 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/f42e8b68/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 501. Total energy = 1762.8662 kcal/mol (1756.7763 without restraints) Performing minimization step: 502. Total energy = 1761.9486 kcal/mol (1755.8612 without restraints) Performing minimization step: 503. Total energy = 1761.0343 kcal/mol (1754.9495 without restraints) Performing minimization step: 504. Total energy = 1760.1239 kcal/mol (1754.0416 without restraints) Performing minimization step: 505. Total energy = 1759.2171 kcal/mol (1753.1374 without restraints) Performing minimization step: 506. Total energy = 1758.3139 kcal/mol (1752.2366 without restraints) Performing minimization step: 507. Total energy = 1757.4140 kcal/mol (1751.3393 without restraints) Performing minimization step: 508. Total energy = 1756.5177 kcal/mol (1750.4455 without restraints) Performing minimization step: 509. Total energy = 1755.6247 kcal/mol (1749.5551 without restraints) Performing minimization step: 510. Total energy = 1754.7355 kcal/mol (1748.6684 without restraints) Performing minimization step: 511. Total energy = 1753.8497 kcal/mol (1747.7852 without restraints) Performing minimization step: 512. Total energy = 1752.9675 kcal/mol (1746.9055 without restraints) Performing minimization step: 513. Total energy = 1752.0888 kcal/mol (1746.0294 without restraints) Performing minimization step: 514. Total energy = 1751.2131 kcal/mol (1745.1562 without restraints) Performing minimization step: 515. Total energy = 1750.3412 kcal/mol (1744.2868 without restraints) Performing minimization step: 516. Total energy = 1749.4724 kcal/mol (1743.4206 without restraints) Performing minimization step: 517. Total energy = 1748.6071 kcal/mol (1742.5579 without restraints) Performing minimization step: 518. Total energy = 1747.7452 kcal/mol (1741.6986 without restraints) Performing minimization step: 519. Total energy = 1746.8870 kcal/mol (1740.8429 without restraints) Performing minimization step: 520. Total energy = 1746.0319 kcal/mol (1739.9904 without restraints) Performing minimization step: 521. Total energy = 1745.1801 kcal/mol (1739.1412 without restraints) Performing minimization step: 522. Total energy = 1744.3317 kcal/mol (1738.2953 without restraints) Performing minimization step: 523. Total energy = 1743.4866 kcal/mol (1737.4529 without restraints) Performing minimization step: 524. Total energy = 1742.6448 kcal/mol (1736.6137 without restraints) Performing minimization step: 525. Total energy = 1741.8063 kcal/mol (1735.7777 without restraints) Performing minimization step: 526. Total energy = 1740.9711 kcal/mol (1734.9452 without restraints) Performing minimization step: 527. Total energy = 1740.1390 kcal/mol (1734.1157 without restraints) Performing minimization step: 528. Total energy = 1739.3104 kcal/mol (1733.2897 without restraints) Performing minimization step: 529. Total energy = 1738.4848 kcal/mol (1732.4667 without restraints) Performing minimization step: 530. Total energy = 1737.6629 kcal/mol (1731.6474 without restraints) Performing minimization step: 531. Total energy = 1736.8440 kcal/mol (1730.8312 without restraints) Performing minimization step: 532. Total energy = 1736.0284 kcal/mol (1730.0181 without restraints) Performing minimization step: 533. Total energy = 1735.2160 kcal/mol (1729.2083 without restraints) Performing minimization step: 534. Total energy = 1734.4067 kcal/mol (1728.4017 without restraints) Performing minimization step: 535. Total energy = 1733.6005 kcal/mol (1727.5981 without restraints) Performing minimization step: 536. Total energy = 1732.7976 kcal/mol (1726.7979 without restraints) Performing minimization step: 537. Total energy = 1731.9979 kcal/mol (1726.0008 without restraints) Performing minimization step: 538. Total energy = 1731.2016 kcal/mol (1725.2072 without restraints) Performing minimization step: 539. Total energy = 1730.4082 kcal/mol (1724.4164 without restraints) Performing minimization step: 540. Total energy = 1729.6178 kcal/mol (1723.6287 without restraints) Performing minimization step: 541. Total energy = 1728.8306 kcal/mol (1722.8441 without restraints) Performing minimization step: 542. Total energy = 1728.0462 kcal/mol (1722.0624 without restraints) Performing minimization step: 543. Total energy = 1727.2654 kcal/mol (1721.2843 without restraints) Performing minimization step: 544. Total energy = 1726.4875 kcal/mol (1720.5090 without restraints) Performing minimization step: 545. Total energy = 1725.7128 kcal/mol (1719.7370 without restraints) Performing minimization step: 546. Total energy = 1724.9410 kcal/mol (1718.9678 without restraints) Performing minimization step: 547. Total energy = 1724.1722 kcal/mol (1718.2018 without restraints) Performing minimization step: 548. Total energy = 1723.4066 kcal/mol (1717.4389 without restraints) Performing minimization step: 549. Total energy = 1722.6438 kcal/mol (1716.6787 without restraints) Performing minimization step: 550. Total energy = 1721.8841 kcal/mol (1715.9217 without restraints) Performing minimization step: 551. Total energy = 1721.1274 kcal/mol (1715.1677 without restraints) Performing minimization step: 552. Total energy = 1720.3737 kcal/mol (1714.4167 without restraints) Performing minimization step: 553. Total energy = 1719.6230 kcal/mol (1713.6687 without restraints) Performing minimization step: 554. Total energy = 1718.8752 kcal/mol (1712.9236 without restraints) Performing minimization step: 555. Total energy = 1718.1302 kcal/mol (1712.1813 without restraints) Performing minimization step: 556. Total energy = 1717.3885 kcal/mol (1711.4423 without restraints) Performing minimization step: 557. Total energy = 1716.6493 kcal/mol (1710.7057 without restraints) Performing minimization step: 558. Total energy = 1715.9132 kcal/mol (1709.9724 without restraints) Performing minimization step: 559. Total energy = 1715.1802 kcal/mol (1709.2423 without restraints) Performing minimization step: 560. Total energy = 1714.4502 kcal/mol (1708.5149 without restraints) Performing minimization step: 561. Total energy = 1713.7228 kcal/mol (1707.7901 without restraints) Performing minimization step: 562. Total energy = 1712.9983 kcal/mol (1707.0684 without restraints) Performing minimization step: 563. Total energy = 1712.2767 kcal/mol (1706.3496 without restraints) Performing minimization step: 564. Total energy = 1711.5576 kcal/mol (1705.6332 without restraints) Performing minimization step: 565. Total energy = 1710.8419 kcal/mol (1704.9203 without restraints) Performing minimization step: 566. Total energy = 1710.1289 kcal/mol (1704.2101 without restraints) Performing minimization step: 567. Total energy = 1709.4187 kcal/mol (1703.5026 without restraints) Performing minimization step: 568. Total energy = 1708.7112 kcal/mol (1702.7978 without restraints) Performing minimization step: 569. Total energy = 1708.0063 kcal/mol (1702.0957 without restraints) Performing minimization step: 570. Total energy = 1707.3043 kcal/mol (1701.3965 without restraints) Performing minimization step: 571. Total energy = 1706.6051 kcal/mol (1700.6999 without restraints) Performing minimization step: 572. Total energy = 1705.9086 kcal/mol (1700.0064 without restraints) Performing minimization step: 573. Total energy = 1705.2152 kcal/mol (1699.3157 without restraints) Performing minimization step: 574. Total energy = 1704.5242 kcal/mol (1698.6275 without restraints) Performing minimization step: 575. Total energy = 1703.8359 kcal/mol (1697.9420 without restraints) Performing minimization step: 576. Total energy = 1703.1501 kcal/mol (1697.2590 without restraints) Performing minimization step: 577. Total energy = 1702.4675 kcal/mol (1696.5793 without restraints) Performing minimization step: 578. Total energy = 1701.7877 kcal/mol (1695.9022 without restraints) Performing minimization step: 579. Total energy = 1701.1105 kcal/mol (1695.2278 without restraints) Performing minimization step: 580. Total energy = 1700.4360 kcal/mol (1694.5561 without restraints) Performing minimization step: 581. Total energy = 1699.7642 kcal/mol (1693.8871 without restraints) Performing minimization step: 582. Total energy = 1699.0950 kcal/mol (1693.2208 without restraints) Performing minimization step: 583. Total energy = 1698.4285 kcal/mol (1692.5571 without restraints) Performing minimization step: 584. Total energy = 1697.7648 kcal/mol (1691.8962 without restraints) Performing minimization step: 585. Total energy = 1697.1037 kcal/mol (1691.2380 without restraints) Performing minimization step: 586. Total energy = 1696.4451 kcal/mol (1690.5821 without restraints) Performing minimization step: 587. Total energy = 1695.7890 kcal/mol (1689.9289 without restraints) Performing minimization step: 588. Total energy = 1695.1355 kcal/mol (1689.2783 without restraints) Performing minimization step: 589. Total energy = 1694.4847 kcal/mol (1688.6303 without restraints) Performing minimization step: 590. Total energy = 1693.8365 kcal/mol (1687.9851 without restraints) Performing minimization step: 591. Total energy = 1693.1909 kcal/mol (1687.3422 without restraints) Performing minimization step: 592. Total energy = 1692.5475 kcal/mol (1686.7017 without restraints) Performing minimization step: 593. Total energy = 1691.9069 kcal/mol (1686.0639 without restraints) Performing minimization step: 594. Total energy = 1691.2688 kcal/mol (1685.4287 without restraints) Performing minimization step: 595. Total energy = 1690.6336 kcal/mol (1684.7964 without restraints) Performing minimization step: 596. Total energy = 1690.0018 kcal/mol (1684.1674 without restraints) Performing minimization step: 597. Total energy = 1689.3712 kcal/mol (1683.5397 without restraints) Performing minimization step: 598. Total energy = 1688.7431 kcal/mol (1682.9145 without restraints) Performing minimization step: 599. Total energy = 1688.1175 kcal/mol (1682.2918 without restraints) Performing minimization step: 600. Total energy = 1687.4939 kcal/mol (1681.6711 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/f42e8b68/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 601. Total energy = 1686.8733 kcal/mol (1681.0533 without restraints) Performing minimization step: 602. Total energy = 1686.2550 kcal/mol (1680.4379 without restraints) Performing minimization step: 603. Total energy = 1685.6391 kcal/mol (1679.8250 without restraints) Performing minimization step: 604. Total energy = 1685.0260 kcal/mol (1679.2147 without restraints) Performing minimization step: 605. Total energy = 1684.4150 kcal/mol (1678.6067 without restraints) Performing minimization step: 606. Total energy = 1683.8065 kcal/mol (1678.0011 without restraints) Performing minimization step: 607. Total energy = 1683.2004 kcal/mol (1677.3978 without restraints) Performing minimization step: 608. Total energy = 1682.5966 kcal/mol (1676.7970 without restraints) Performing minimization step: 609. Total energy = 1681.9952 kcal/mol (1676.1985 without restraints) Performing minimization step: 610. Total energy = 1681.3961 kcal/mol (1675.6024 without restraints) Performing minimization step: 611. Total energy = 1680.7995 kcal/mol (1675.0087 without restraints) Performing minimization step: 612. Total energy = 1680.2052 kcal/mol (1674.4173 without restraints) Performing minimization step: 613. Total energy = 1679.6132 kcal/mol (1673.8282 without restraints) Performing minimization step: 614. Total energy = 1679.0239 kcal/mol (1673.2419 without restraints) Performing minimization step: 615. Total energy = 1678.4366 kcal/mol (1672.6576 without restraints) Performing minimization step: 616. Total energy = 1677.8516 kcal/mol (1672.0755 without restraints) Performing minimization step: 617. Total energy = 1677.2685 kcal/mol (1671.4954 without restraints) Performing minimization step: 618. Total energy = 1676.6881 kcal/mol (1670.9179 without restraints) Performing minimization step: 619. Total energy = 1676.1099 kcal/mol (1670.3426 without restraints) Performing minimization step: 620. Total energy = 1675.5341 kcal/mol (1669.7698 without restraints) Performing minimization step: 621. Total energy = 1674.9606 kcal/mol (1669.1993 without restraints) Performing minimization step: 622. Total energy = 1674.3892 kcal/mol (1668.6309 without restraints) Performing minimization step: 623. Total energy = 1673.8199 kcal/mol (1668.0645 without restraints) Performing minimization step: 624. Total energy = 1673.2529 kcal/mol (1667.5005 without restraints) Performing minimization step: 625. Total energy = 1672.6882 kcal/mol (1666.9389 without restraints) Performing minimization step: 626. Total energy = 1672.1257 kcal/mol (1666.3793 without restraints) Performing minimization step: 627. Total energy = 1671.5654 kcal/mol (1665.8220 without restraints) Performing minimization step: 628. Total energy = 1671.0075 kcal/mol (1665.2670 without restraints) Performing minimization step: 629. Total energy = 1670.4513 kcal/mol (1664.7139 without restraints) Performing minimization step: 630. Total energy = 1669.8975 kcal/mol (1664.1631 without restraints) Performing minimization step: 631. Total energy = 1669.3458 kcal/mol (1663.6144 without restraints) Performing minimization step: 632. Total energy = 1668.7963 kcal/mol (1663.0679 without restraints) Performing minimization step: 633. Total energy = 1668.2490 kcal/mol (1662.5236 without restraints) Performing minimization step: 634. Total energy = 1667.7037 kcal/mol (1661.9813 without restraints) Performing minimization step: 635. Total energy = 1667.1604 kcal/mol (1661.4410 without restraints) Performing minimization step: 636. Total energy = 1666.6194 kcal/mol (1660.9029 without restraints) Performing minimization step: 637. Total energy = 1666.0801 kcal/mol (1660.3668 without restraints) Performing minimization step: 638. Total energy = 1665.5437 kcal/mol (1659.8335 without restraints) Performing minimization step: 639. Total energy = 1665.0090 kcal/mol (1659.3018 without restraints) Performing minimization step: 640. Total energy = 1664.4764 kcal/mol (1658.7722 without restraints) Performing minimization step: 641. Total energy = 1663.9456 kcal/mol (1658.2444 without restraints) Performing minimization step: 642. Total energy = 1663.4169 kcal/mol (1657.7187 without restraints) Performing minimization step: 643. Total energy = 1662.8903 kcal/mol (1657.1953 without restraints) Performing minimization step: 644. Total energy = 1662.3657 kcal/mol (1656.6739 without restraints) Performing minimization step: 645. Total energy = 1661.8428 kcal/mol (1656.1537 without restraints) Performing minimization step: 646. Total energy = 1661.3223 kcal/mol (1655.6364 without restraints) Performing minimization step: 647. Total energy = 1660.8038 kcal/mol (1655.1209 without restraints) Performing minimization step: 648. Total energy = 1660.2872 kcal/mol (1654.6075 without restraints) Performing minimization step: 649. Total energy = 1659.7729 kcal/mol (1654.0963 without restraints) Performing minimization step: 650. Total energy = 1659.2605 kcal/mol (1653.5869 without restraints) Performing minimization step: 651. Total energy = 1658.7497 kcal/mol (1653.0791 without restraints) Performing minimization step: 652. Total energy = 1658.2411 kcal/mol (1652.5737 without restraints) Performing minimization step: 653. Total energy = 1657.7345 kcal/mol (1652.0701 without restraints) Performing minimization step: 654. Total energy = 1657.2296 kcal/mol (1651.5683 without restraints) Performing minimization step: 655. Total energy = 1656.7268 kcal/mol (1651.0687 without restraints) Performing minimization step: 656. Total energy = 1656.2260 kcal/mol (1650.5709 without restraints) Performing minimization step: 657. Total energy = 1655.7269 kcal/mol (1650.0750 without restraints) Performing minimization step: 658. Total energy = 1655.2299 kcal/mol (1649.5810 without restraints) Performing minimization step: 659. Total energy = 1654.7348 kcal/mol (1649.0890 without restraints) Performing minimization step: 660. Total energy = 1654.2415 kcal/mol (1648.5989 without restraints) Performing minimization step: 661. Total energy = 1653.7500 kcal/mol (1648.1104 without restraints) Performing minimization step: 662. Total energy = 1653.2602 kcal/mol (1647.6237 without restraints) Performing minimization step: 663. Total energy = 1652.7727 kcal/mol (1647.1394 without restraints) Performing minimization step: 664. Total energy = 1652.2869 kcal/mol (1646.6567 without restraints) Performing minimization step: 665. Total energy = 1651.8030 kcal/mol (1646.1759 without restraints) Performing minimization step: 666. Total energy = 1651.3206 kcal/mol (1645.6967 without restraints) Performing minimization step: 667. Total energy = 1650.8403 kcal/mol (1645.2195 without restraints) Performing minimization step: 668. Total energy = 1650.3615 kcal/mol (1644.7438 without restraints) Performing minimization step: 669. Total energy = 1649.8848 kcal/mol (1644.2702 without restraints) Performing minimization step: 670. Total energy = 1649.4095 kcal/mol (1643.7981 without restraints) Performing minimization step: 671. Total energy = 1648.9363 kcal/mol (1643.3281 without restraints) Performing minimization step: 672. Total energy = 1648.4650 kcal/mol (1642.8599 without restraints) Performing minimization step: 673. Total energy = 1647.9952 kcal/mol (1642.3932 without restraints) Performing minimization step: 674. Total energy = 1647.5273 kcal/mol (1641.9285 without restraints) Performing minimization step: 675. Total energy = 1647.0612 kcal/mol (1641.4655 without restraints) Performing minimization step: 676. Total energy = 1646.5968 kcal/mol (1641.0044 without restraints) Performing minimization step: 677. Total energy = 1646.1342 kcal/mol (1640.5449 without restraints) Performing minimization step: 678. Total energy = 1645.6733 kcal/mol (1640.0872 without restraints) Performing minimization step: 679. Total energy = 1645.2142 kcal/mol (1639.6313 without restraints) Performing minimization step: 680. Total energy = 1644.7564 kcal/mol (1639.1766 without restraints) Performing minimization step: 681. Total energy = 1644.3007 kcal/mol (1638.7241 without restraints) Performing minimization step: 682. Total energy = 1643.8464 kcal/mol (1638.2729 without restraints) Performing minimization step: 683. Total energy = 1643.3938 kcal/mol (1637.8235 without restraints) Performing minimization step: 684. Total energy = 1642.9429 kcal/mol (1637.3758 without restraints) Performing minimization step: 685. Total energy = 1642.4938 kcal/mol (1636.9299 without restraints) Performing minimization step: 686. Total energy = 1642.0464 kcal/mol (1636.4855 without restraints) Performing minimization step: 687. Total energy = 1641.6006 kcal/mol (1636.0430 without restraints) Performing minimization step: 688. Total energy = 1641.1565 kcal/mol (1635.6021 without restraints) Performing minimization step: 689. Total energy = 1640.7139 kcal/mol (1635.1627 without restraints) Performing minimization step: 690. Total energy = 1640.2730 kcal/mol (1634.7250 without restraints) Performing minimization step: 691. Total energy = 1639.8332 kcal/mol (1634.2883 without restraints) Performing minimization step: 692. Total energy = 1639.3954 kcal/mol (1633.8538 without restraints) Performing minimization step: 693. Total energy = 1638.9593 kcal/mol (1633.4210 without restraints) Performing minimization step: 694. Total energy = 1638.5248 kcal/mol (1632.9896 without restraints) Performing minimization step: 695. Total energy = 1638.0920 kcal/mol (1632.5602 without restraints) Performing minimization step: 696. Total energy = 1637.6603 kcal/mol (1632.1316 without restraints) Performing minimization step: 697. Total energy = 1637.2305 kcal/mol (1631.7050 without restraints) Performing minimization step: 698. Total energy = 1636.8023 kcal/mol (1631.2801 without restraints) Performing minimization step: 699. Total energy = 1636.3755 kcal/mol (1630.8564 without restraints) Performing minimization step: 700. Total energy = 1635.9504 kcal/mol (1630.4345 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/f42e8b68/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 701. Total energy = 1635.5269 kcal/mol (1630.0142 without restraints) Performing minimization step: 702. Total energy = 1635.1044 kcal/mol (1629.5949 without restraints) Performing minimization step: 703. Total energy = 1634.6838 kcal/mol (1629.1776 without restraints) Performing minimization step: 704. Total energy = 1634.2648 kcal/mol (1628.7619 without restraints) Performing minimization step: 705. Total energy = 1633.8474 kcal/mol (1628.3477 without restraints) Performing minimization step: 706. Total energy = 1633.4313 kcal/mol (1627.9349 without restraints) Performing minimization step: 707. Total energy = 1633.0172 kcal/mol (1627.5240 without restraints) Performing minimization step: 708. Total energy = 1632.6041 kcal/mol (1627.1142 without restraints) Performing minimization step: 709. Total energy = 1632.1927 kcal/mol (1626.7060 without restraints) Performing minimization step: 710. Total energy = 1631.7823 kcal/mol (1626.2989 without restraints) Performing minimization step: 711. Total energy = 1631.3736 kcal/mol (1625.8934 without restraints) Performing minimization step: 712. Total energy = 1630.9663 kcal/mol (1625.4894 without restraints) Performing minimization step: 713. Total energy = 1630.5605 kcal/mol (1625.0868 without restraints) Performing minimization step: 714. Total energy = 1630.1561 kcal/mol (1624.6857 without restraints) Performing minimization step: 715. Total energy = 1629.7531 kcal/mol (1624.2860 without restraints) Performing minimization step: 716. Total energy = 1629.3516 kcal/mol (1623.8877 without restraints) Performing minimization step: 717. Total energy = 1628.9514 kcal/mol (1623.4908 without restraints) Performing minimization step: 718. Total energy = 1628.5526 kcal/mol (1623.0953 without restraints) Performing minimization step: 719. Total energy = 1628.1553 kcal/mol (1622.7011 without restraints) Performing minimization step: 720. Total energy = 1627.7592 kcal/mol (1622.3084 without restraints) Performing minimization step: 721. Total energy = 1627.3646 kcal/mol (1621.9171 without restraints) Performing minimization step: 722. Total energy = 1626.9714 kcal/mol (1621.5271 without restraints) Performing minimization step: 723. Total energy = 1626.5795 kcal/mol (1621.1384 without restraints) Performing minimization step: 724. Total energy = 1626.1890 kcal/mol (1620.7514 without restraints) Performing minimization step: 725. Total energy = 1625.7997 kcal/mol (1620.3652 without restraints) Performing minimization step: 726. Total energy = 1625.4113 kcal/mol (1619.9801 without restraints) Performing minimization step: 727. Total energy = 1625.0247 kcal/mol (1619.5968 without restraints) Performing minimization step: 728. Total energy = 1624.6397 kcal/mol (1619.2151 without restraints) Performing minimization step: 729. Total energy = 1624.2561 kcal/mol (1618.8349 without restraints) Performing minimization step: 730. Total energy = 1623.8737 kcal/mol (1618.4557 without restraints) Performing minimization step: 731. Total energy = 1623.4924 kcal/mol (1618.0777 without restraints) Performing minimization step: 732. Total energy = 1623.1125 kcal/mol (1617.7011 without restraints) Performing minimization step: 733. Total energy = 1622.7339 kcal/mol (1617.3258 without restraints) Performing minimization step: 734. Total energy = 1622.3567 kcal/mol (1616.9517 without restraints) Performing minimization step: 735. Total energy = 1621.9804 kcal/mol (1616.5789 without restraints) Performing minimization step: 736. Total energy = 1621.6054 kcal/mol (1616.2071 without restraints) Performing minimization step: 737. Total energy = 1621.2318 kcal/mol (1615.8368 without restraints) Performing minimization step: 738. Total energy = 1620.8592 kcal/mol (1615.4676 without restraints) Performing minimization step: 739. Total energy = 1620.4878 kcal/mol (1615.0994 without restraints) Performing minimization step: 740. Total energy = 1620.1180 kcal/mol (1614.7329 without restraints) Performing minimization step: 741. Total energy = 1619.7496 kcal/mol (1614.3678 without restraints) Performing minimization step: 742. Total energy = 1619.3822 kcal/mol (1614.0037 without restraints) Performing minimization step: 743. Total energy = 1619.0162 kcal/mol (1613.6411 without restraints) Performing minimization step: 744. Total energy = 1618.6515 kcal/mol (1613.2797 without restraints) Performing minimization step: 745. Total energy = 1618.2879 kcal/mol (1612.9195 without restraints) Performing minimization step: 746. Total energy = 1617.9255 kcal/mol (1612.5602 without restraints) Performing minimization step: 747. Total energy = 1617.5644 kcal/mol (1612.2026 without restraints) Performing minimization step: 748. Total energy = 1617.2044 kcal/mol (1611.8459 without restraints) Performing minimization step: 749. Total energy = 1616.8459 kcal/mol (1611.4907 without restraints) Performing minimization step: 750. Total energy = 1616.4879 kcal/mol (1611.1359 without restraints) Performing minimization step: 751. Total energy = 1616.1315 kcal/mol (1610.7828 without restraints) Performing minimization step: 752. Total energy = 1615.7759 kcal/mol (1610.4305 without restraints) Performing minimization step: 753. Total energy = 1615.4216 kcal/mol (1610.0795 without restraints) Performing minimization step: 754. Total energy = 1615.0682 kcal/mol (1609.7295 without restraints) Performing minimization step: 755. Total energy = 1614.7161 kcal/mol (1609.3807 without restraints) Performing minimization step: 756. Total energy = 1614.3651 kcal/mol (1609.0330 without restraints) Performing minimization step: 757. Total energy = 1614.0153 kcal/mol (1608.6865 without restraints) Performing minimization step: 758. Total energy = 1613.6667 kcal/mol (1608.3412 without restraints) Performing minimization step: 759. Total energy = 1613.3191 kcal/mol (1607.9970 without restraints) Performing minimization step: 760. Total energy = 1612.9725 kcal/mol (1607.6536 without restraints) Performing minimization step: 761. Total energy = 1612.6271 kcal/mol (1607.3116 without restraints) Performing minimization step: 762. Total energy = 1612.2830 kcal/mol (1606.9709 without restraints) Performing minimization step: 763. Total energy = 1611.9398 kcal/mol (1606.6309 without restraints) Performing minimization step: 764. Total energy = 1611.5979 kcal/mol (1606.2924 without restraints) Performing minimization step: 765. Total energy = 1611.2569 kcal/mol (1605.9548 without restraints) Performing minimization step: 766. Total energy = 1610.9165 kcal/mol (1605.6176 without restraints) Performing minimization step: 767. Total energy = 1610.5776 kcal/mol (1605.2822 without restraints) Performing minimization step: 768. Total energy = 1610.2401 kcal/mol (1604.9480 without restraints) Performing minimization step: 769. Total energy = 1609.9034 kcal/mol (1604.6146 without restraints) Performing minimization step: 770. Total energy = 1609.5678 kcal/mol (1604.2823 without restraints) Performing minimization step: 771. Total energy = 1609.2332 kcal/mol (1603.9510 without restraints) Performing minimization step: 772. Total energy = 1608.9000 kcal/mol (1603.6212 without restraints) Performing minimization step: 773. Total energy = 1608.5676 kcal/mol (1603.2921 without restraints) Performing minimization step: 774. Total energy = 1608.2361 kcal/mol (1602.9640 without restraints) Performing minimization step: 775. Total energy = 1607.9058 kcal/mol (1602.6371 without restraints) Performing minimization step: 776. Total energy = 1607.5765 kcal/mol (1602.3110 without restraints) Performing minimization step: 777. Total energy = 1607.2482 kcal/mol (1601.9860 without restraints) Performing minimization step: 778. Total energy = 1606.9208 kcal/mol (1601.6620 without restraints) Performing minimization step: 779. Total energy = 1606.5942 kcal/mol (1601.3387 without restraints) Performing minimization step: 780. Total energy = 1606.2685 kcal/mol (1601.0164 without restraints) Performing minimization step: 781. Total energy = 1605.9441 kcal/mol (1600.6953 without restraints) Performing minimization step: 782. Total energy = 1605.6206 kcal/mol (1600.3752 without restraints) Performing minimization step: 783. Total energy = 1605.2983 kcal/mol (1600.0561 without restraints) Performing minimization step: 784. Total energy = 1604.9768 kcal/mol (1599.7380 without restraints) Performing minimization step: 785. Total energy = 1604.6564 kcal/mol (1599.4209 without restraints) Performing minimization step: 786. Total energy = 1604.3370 kcal/mol (1599.1049 without restraints) Performing minimization step: 787. Total energy = 1604.0185 kcal/mol (1598.7897 without restraints) Performing minimization step: 788. Total energy = 1603.7009 kcal/mol (1598.4754 without restraints) Performing minimization step: 789. Total energy = 1603.3842 kcal/mol (1598.1621 without restraints) Performing minimization step: 790. Total energy = 1603.0685 kcal/mol (1597.8497 without restraints) Performing minimization step: 791. Total energy = 1602.7531 kcal/mol (1597.5376 without restraints) Performing minimization step: 792. Total energy = 1602.4389 kcal/mol (1597.2267 without restraints) Performing minimization step: 793. Total energy = 1602.1260 kcal/mol (1596.9173 without restraints) Performing minimization step: 794. Total energy = 1601.8141 kcal/mol (1596.6086 without restraints) Performing minimization step: 795. Total energy = 1601.5033 kcal/mol (1596.3012 without restraints) Performing minimization step: 796. Total energy = 1601.1931 kcal/mol (1595.9943 without restraints) Performing minimization step: 797. Total energy = 1600.8838 kcal/mol (1595.6884 without restraints) Performing minimization step: 798. Total energy = 1600.5752 kcal/mol (1595.3831 without restraints) Performing minimization step: 799. Total energy = 1600.2681 kcal/mol (1595.0794 without restraints) Performing minimization step: 800. Total energy = 1599.9618 kcal/mol (1594.7763 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/f42e8b68/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 801. Total energy = 1599.6560 kcal/mol (1594.4739 without restraints) Performing minimization step: 802. Total energy = 1599.3512 kcal/mol (1594.1725 without restraints) Performing minimization step: 803. Total energy = 1599.0475 kcal/mol (1593.8721 without restraints) Performing minimization step: 804. Total energy = 1598.7443 kcal/mol (1593.5723 without restraints) Performing minimization step: 805. Total energy = 1598.4424 kcal/mol (1593.2737 without restraints) Performing minimization step: 806. Total energy = 1598.1409 kcal/mol (1592.9755 without restraints) Performing minimization step: 807. Total energy = 1597.8406 kcal/mol (1592.6785 without restraints) Performing minimization step: 808. Total energy = 1597.5412 kcal/mol (1592.3825 without restraints) Performing minimization step: 809. Total energy = 1597.2426 kcal/mol (1592.0871 without restraints) Performing minimization step: 810. Total energy = 1596.9446 kcal/mol (1591.7923 without restraints) Performing minimization step: 811. Total energy = 1596.6474 kcal/mol (1591.4986 without restraints) Performing minimization step: 812. Total energy = 1596.3513 kcal/mol (1591.2058 without restraints) Performing minimization step: 813. Total energy = 1596.0560 kcal/mol (1590.9139 without restraints) Performing minimization step: 814. Total energy = 1595.7615 kcal/mol (1590.6227 without restraints) Performing minimization step: 815. Total energy = 1595.4679 kcal/mol (1590.3324 without restraints) Performing minimization step: 816. Total energy = 1595.1751 kcal/mol (1590.0429 without restraints) Performing minimization step: 817. Total energy = 1594.8829 kcal/mol (1589.7541 without restraints) Performing minimization step: 818. Total energy = 1594.5917 kcal/mol (1589.4662 without restraints) Performing minimization step: 819. Total energy = 1594.3013 kcal/mol (1589.1791 without restraints) Performing minimization step: 820. Total energy = 1594.0117 kcal/mol (1588.8929 without restraints) Performing minimization step: 821. Total energy = 1593.7230 kcal/mol (1588.6074 without restraints) Performing minimization step: 822. Total energy = 1593.4349 kcal/mol (1588.3227 without restraints) Performing minimization step: 823. Total energy = 1593.1477 kcal/mol (1588.0388 without restraints) Performing minimization step: 824. Total energy = 1592.8613 kcal/mol (1587.7558 without restraints) Performing minimization step: 825. Total energy = 1592.5757 kcal/mol (1587.4735 without restraints) Performing minimization step: 826. Total energy = 1592.2910 kcal/mol (1587.1920 without restraints) Performing minimization step: 827. Total energy = 1592.0069 kcal/mol (1586.9113 without restraints) Performing minimization step: 828. Total energy = 1591.7237 kcal/mol (1586.6314 without restraints) Performing minimization step: 829. Total energy = 1591.4412 kcal/mol (1586.3523 without restraints) Performing minimization step: 830. Total energy = 1591.1595 kcal/mol (1586.0738 without restraints) Performing minimization step: 831. Total energy = 1590.8789 kcal/mol (1585.7966 without restraints) Performing minimization step: 832. Total energy = 1590.5987 kcal/mol (1585.5196 without restraints) Performing minimization step: 833. Total energy = 1590.3192 kcal/mol (1585.2435 without restraints) Performing minimization step: 834. Total energy = 1590.0405 kcal/mol (1584.9681 without restraints) Performing minimization step: 835. Total energy = 1589.7627 kcal/mol (1584.6936 without restraints) Performing minimization step: 836. Total energy = 1589.4852 kcal/mol (1584.4190 without restraints) Performing minimization step: 837. Total energy = 1589.2084 kcal/mol (1584.1459 without restraints) Performing minimization step: 838. Total energy = 1588.9326 kcal/mol (1583.8734 without restraints) Performing minimization step: 839. Total energy = 1588.6576 kcal/mol (1583.6017 without restraints) Performing minimization step: 840. Total energy = 1588.3831 kcal/mol (1583.3305 without restraints) Performing minimization step: 841. Total energy = 1588.1092 kcal/mol (1583.0599 without restraints) Performing minimization step: 842. Total energy = 1587.8361 kcal/mol (1582.7901 without restraints) Performing minimization step: 843. Total energy = 1587.5638 kcal/mol (1582.5211 without restraints) Performing minimization step: 844. Total energy = 1587.2926 kcal/mol (1582.2532 without restraints) Performing minimization step: 845. Total energy = 1587.0222 kcal/mol (1581.9861 without restraints) Performing minimization step: 846. Total energy = 1586.7523 kcal/mol (1581.7196 without restraints) Performing minimization step: 847. Total energy = 1586.4832 kcal/mol (1581.4536 without restraints) Performing minimization step: 848. Total energy = 1586.2147 kcal/mol (1581.1885 without restraints) Performing minimization step: 849. Total energy = 1585.9467 kcal/mol (1580.9239 without restraints) Performing minimization step: 850. Total energy = 1585.6794 kcal/mol (1580.6598 without restraints) Performing minimization step: 851. Total energy = 1585.4131 kcal/mol (1580.3967 without restraints) Performing minimization step: 852. Total energy = 1585.1471 kcal/mol (1580.1340 without restraints) Performing minimization step: 853. Total energy = 1584.8823 kcal/mol (1579.8725 without restraints) Performing minimization step: 854. Total energy = 1584.6178 kcal/mol (1579.6113 without restraints) Performing minimization step: 855. Total energy = 1584.3542 kcal/mol (1579.3510 without restraints) Performing minimization step: 856. Total energy = 1584.0911 kcal/mol (1579.0912 without restraints) Performing minimization step: 857. Total energy = 1583.8287 kcal/mol (1578.8320 without restraints) Performing minimization step: 858. Total energy = 1583.5669 kcal/mol (1578.5735 without restraints) Performing minimization step: 859. Total energy = 1583.3059 kcal/mol (1578.3158 without restraints) Performing minimization step: 860. Total energy = 1583.0455 kcal/mol (1578.0586 without restraints) Performing minimization step: 861. Total energy = 1582.7857 kcal/mol (1577.8021 without restraints) Performing minimization step: 862. Total energy = 1582.5270 kcal/mol (1577.5466 without restraints) Performing minimization step: 863. Total energy = 1582.2687 kcal/mol (1577.2917 without restraints) Performing minimization step: 864. Total energy = 1582.0110 kcal/mol (1577.0373 without restraints) Performing minimization step: 865. Total energy = 1581.7539 kcal/mol (1576.7834 without restraints) Performing minimization step: 866. Total energy = 1581.4973 kcal/mol (1576.5301 without restraints) Performing minimization step: 867. Total energy = 1581.2414 kcal/mol (1576.2774 without restraints) Performing minimization step: 868. Total energy = 1580.9862 kcal/mol (1576.0255 without restraints) Performing minimization step: 869. Total energy = 1580.7308 kcal/mol (1575.7731 without restraints) Performing minimization step: 870. Total energy = 1580.4768 kcal/mol (1575.5225 without restraints) Performing minimization step: 871. Total energy = 1580.2231 kcal/mol (1575.2722 without restraints) Performing minimization step: 872. Total energy = 1579.9704 kcal/mol (1575.0227 without restraints) Performing minimization step: 873. Total energy = 1579.7183 kcal/mol (1574.7738 without restraints) Performing minimization step: 874. Total energy = 1579.4675 kcal/mol (1574.5262 without restraints) Performing minimization step: 875. Total energy = 1579.2170 kcal/mol (1574.2791 without restraints) Performing minimization step: 876. Total energy = 1578.9666 kcal/mol (1574.0318 without restraints) Performing minimization step: 877. Total energy = 1578.7169 kcal/mol (1573.7853 without restraints) Performing minimization step: 878. Total energy = 1578.4678 kcal/mol (1573.5395 without restraints) Performing minimization step: 879. Total energy = 1578.2194 kcal/mol (1573.2944 without restraints) Performing minimization step: 880. Total energy = 1577.9715 kcal/mol (1573.0497 without restraints) Performing minimization step: 881. Total energy = 1577.7240 kcal/mol (1572.8054 without restraints) Performing minimization step: 882. Total energy = 1577.4774 kcal/mol (1572.5621 without restraints) Performing minimization step: 883. Total energy = 1577.2315 kcal/mol (1572.3194 without restraints) Performing minimization step: 884. Total energy = 1576.9860 kcal/mol (1572.0771 without restraints) Performing minimization step: 885. Total energy = 1576.7414 kcal/mol (1571.8358 without restraints) Performing minimization step: 886. Total energy = 1576.4970 kcal/mol (1571.5946 without restraints) Performing minimization step: 887. Total energy = 1576.2531 kcal/mol (1571.3539 without restraints) Performing minimization step: 888. Total energy = 1576.0097 kcal/mol (1571.1137 without restraints) Performing minimization step: 889. Total energy = 1575.7670 kcal/mol (1570.8741 without restraints) Performing minimization step: 890. Total energy = 1575.5244 kcal/mol (1570.6347 without restraints) Performing minimization step: 891. Total energy = 1575.2831 kcal/mol (1570.3967 without restraints) Performing minimization step: 892. Total energy = 1575.0422 kcal/mol (1570.1590 without restraints) Performing minimization step: 893. Total energy = 1574.8016 kcal/mol (1569.9216 without restraints) Performing minimization step: 894. Total energy = 1574.5616 kcal/mol (1569.6849 without restraints) Performing minimization step: 895. Total energy = 1574.3224 kcal/mol (1569.4488 without restraints) Performing minimization step: 896. Total energy = 1574.0837 kcal/mol (1569.2133 without restraints) Performing minimization step: 897. Total energy = 1573.8455 kcal/mol (1568.9783 without restraints) Performing minimization step: 898. Total energy = 1573.6079 kcal/mol (1568.7440 without restraints) Performing minimization step: 899. Total energy = 1573.3716 kcal/mol (1568.5107 without restraints) Performing minimization step: 900. Total energy = 1573.1350 kcal/mol (1568.2774 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/f42e8b68/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 901. Total energy = 1572.8988 kcal/mol (1568.0444 without restraints) Performing minimization step: 902. Total energy = 1572.6635 kcal/mol (1567.8122 without restraints) Performing minimization step: 903. Total energy = 1572.4286 kcal/mol (1567.5806 without restraints) Performing minimization step: 904. Total energy = 1572.1943 kcal/mol (1567.3494 without restraints) Performing minimization step: 905. Total energy = 1571.9605 kcal/mol (1567.1188 without restraints) Performing minimization step: 906. Total energy = 1571.7272 kcal/mol (1566.8887 without restraints) Performing minimization step: 907. Total energy = 1571.4945 kcal/mol (1566.6591 without restraints) Performing minimization step: 908. Total energy = 1571.2623 kcal/mol (1566.4301 without restraints) Performing minimization step: 909. Total energy = 1571.0308 kcal/mol (1566.2018 without restraints) Performing minimization step: 910. Total energy = 1570.7996 kcal/mol (1565.9738 without restraints) Performing minimization step: 911. Total energy = 1570.5691 kcal/mol (1565.7465 without restraints) Performing minimization step: 912. Total energy = 1570.3391 kcal/mol (1565.5196 without restraints) Performing minimization step: 913. Total energy = 1570.1094 kcal/mol (1565.2931 without restraints) Performing minimization step: 914. Total energy = 1569.8804 kcal/mol (1565.0673 without restraints) Performing minimization step: 915. Total energy = 1569.6521 kcal/mol (1564.8421 without restraints) Performing minimization step: 916. Total energy = 1569.4241 kcal/mol (1564.6172 without restraints) Performing minimization step: 917. Total energy = 1569.1965 kcal/mol (1564.3928 without restraints) Performing minimization step: 918. Total energy = 1568.9696 kcal/mol (1564.1690 without restraints) Performing minimization step: 919. Total energy = 1568.7428 kcal/mol (1563.9454 without restraints) Performing minimization step: 920. Total energy = 1568.5169 kcal/mol (1563.7226 without restraints) Performing minimization step: 921. Total energy = 1568.2914 kcal/mol (1563.5002 without restraints) Performing minimization step: 922. Total energy = 1568.0661 kcal/mol (1563.2780 without restraints) Performing minimization step: 923. Total energy = 1567.8415 kcal/mol (1563.0566 without restraints) Performing minimization step: 924. Total energy = 1567.6178 kcal/mol (1562.8360 without restraints) Performing minimization step: 925. Total energy = 1567.3942 kcal/mol (1562.6156 without restraints) Performing minimization step: 926. Total energy = 1567.1711 kcal/mol (1562.3956 without restraints) Performing minimization step: 927. Total energy = 1566.9489 kcal/mol (1562.1765 without restraints) Performing minimization step: 928. Total energy = 1566.7265 kcal/mol (1561.9573 without restraints) Performing minimization step: 929. Total energy = 1566.5049 kcal/mol (1561.7388 without restraints) Performing minimization step: 930. Total energy = 1566.2840 kcal/mol (1561.5209 without restraints) Performing minimization step: 931. Total energy = 1566.0632 kcal/mol (1561.3033 without restraints) Performing minimization step: 932. Total energy = 1565.8429 kcal/mol (1561.0860 without restraints) Performing minimization step: 933. Total energy = 1565.6228 kcal/mol (1560.8690 without restraints) Performing minimization step: 934. Total energy = 1565.4034 kcal/mol (1560.6528 without restraints) Performing minimization step: 935. Total energy = 1565.1845 kcal/mol (1560.4368 without restraints) Performing minimization step: 936. Total energy = 1564.9661 kcal/mol (1560.2218 without restraints) Performing minimization step: 937. Total energy = 1564.7483 kcal/mol (1560.0069 without restraints) Performing minimization step: 938. Total energy = 1564.5308 kcal/mol (1559.7925 without restraints) Performing minimization step: 939. Total energy = 1564.3138 kcal/mol (1559.5786 without restraints) Performing minimization step: 940. Total energy = 1564.0970 kcal/mol (1559.3649 without restraints) Performing minimization step: 941. Total energy = 1563.8809 kcal/mol (1559.1519 without restraints) Performing minimization step: 942. Total energy = 1563.6650 kcal/mol (1558.9391 without restraints) Performing minimization step: 943. Total energy = 1563.4498 kcal/mol (1558.7269 without restraints) Performing minimization step: 944. Total energy = 1563.2350 kcal/mol (1558.5152 without restraints) Performing minimization step: 945. Total energy = 1563.0207 kcal/mol (1558.3040 without restraints) Performing minimization step: 946. Total energy = 1562.8071 kcal/mol (1558.0934 without restraints) Performing minimization step: 947. Total energy = 1562.5933 kcal/mol (1557.8825 without restraints) Performing minimization step: 948. Total energy = 1562.3800 kcal/mol (1557.6725 without restraints) Performing minimization step: 949. Total energy = 1562.1674 kcal/mol (1557.4630 without restraints) Performing minimization step: 950. Total energy = 1561.9554 kcal/mol (1557.2540 without restraints) Performing minimization step: 951. Total energy = 1561.7436 kcal/mol (1557.0452 without restraints) Performing minimization step: 952. Total energy = 1561.5321 kcal/mol (1556.8366 without restraints) Performing minimization step: 953. Total energy = 1561.3211 kcal/mol (1556.6289 without restraints) Performing minimization step: 954. Total energy = 1561.1107 kcal/mol (1556.4215 without restraints) Performing minimization step: 955. Total energy = 1560.9007 kcal/mol (1556.2144 without restraints) Performing minimization step: 956. Total energy = 1560.6911 kcal/mol (1556.0079 without restraints) Performing minimization step: 957. Total energy = 1560.4817 kcal/mol (1555.8015 without restraints) Performing minimization step: 958. Total energy = 1560.2729 kcal/mol (1555.5958 without restraints) Performing minimization step: 959. Total energy = 1560.0646 kcal/mol (1555.3906 without restraints) Performing minimization step: 960. Total energy = 1559.8568 kcal/mol (1555.1858 without restraints) Performing minimization step: 961. Total energy = 1559.6492 kcal/mol (1554.9812 without restraints) Performing minimization step: 962. Total energy = 1559.4422 kcal/mol (1554.7772 without restraints) Performing minimization step: 963. Total energy = 1559.2356 kcal/mol (1554.5736 without restraints) Performing minimization step: 964. Total energy = 1559.0293 kcal/mol (1554.3704 without restraints) Performing minimization step: 965. Total energy = 1558.8239 kcal/mol (1554.1682 without restraints) Performing minimization step: 966. Total energy = 1558.6186 kcal/mol (1553.9656 without restraints) Performing minimization step: 967. Total energy = 1558.4130 kcal/mol (1553.7630 without restraints) Performing minimization step: 968. Total energy = 1558.2083 kcal/mol (1553.5613 without restraints) Performing minimization step: 969. Total energy = 1558.0040 kcal/mol (1553.3600 without restraints) Performing minimization step: 970. Total energy = 1557.8002 kcal/mol (1553.1592 without restraints) Performing minimization step: 971. Total energy = 1557.5970 kcal/mol (1552.9590 without restraints) Performing minimization step: 972. Total energy = 1557.3942 kcal/mol (1552.7592 without restraints) Performing minimization step: 973. Total energy = 1557.1918 kcal/mol (1552.5598 without restraints) Performing minimization step: 974. Total energy = 1556.9896 kcal/mol (1552.3605 without restraints) Performing minimization step: 975. Total energy = 1556.7876 kcal/mol (1552.1615 without restraints) Performing minimization step: 976. Total energy = 1556.5864 kcal/mol (1551.9633 without restraints) Performing minimization step: 977. Total energy = 1556.3853 kcal/mol (1551.7653 without restraints) Performing minimization step: 978. Total energy = 1556.1845 kcal/mol (1551.5674 without restraints) Performing minimization step: 979. Total energy = 1555.9842 kcal/mol (1551.3701 without restraints) Performing minimization step: 980. Total energy = 1555.7844 kcal/mol (1551.1732 without restraints) Performing minimization step: 981. Total energy = 1555.5845 kcal/mol (1550.9762 without restraints) Performing minimization step: 982. Total energy = 1555.3851 kcal/mol (1550.7798 without restraints) Performing minimization step: 983. Total energy = 1555.1864 kcal/mol (1550.5841 without restraints) Performing minimization step: 984. Total energy = 1554.9879 kcal/mol (1550.3886 without restraints) Performing minimization step: 985. Total energy = 1554.7898 kcal/mol (1550.1933 without restraints) Performing minimization step: 986. Total energy = 1554.5920 kcal/mol (1549.9986 without restraints) Performing minimization step: 987. Total energy = 1554.3946 kcal/mol (1549.8041 without restraints) Performing minimization step: 988. Total energy = 1554.1976 kcal/mol (1549.6099 without restraints) Performing minimization step: 989. Total energy = 1554.0010 kcal/mol (1549.4164 without restraints) Performing minimization step: 990. Total energy = 1553.8046 kcal/mol (1549.2227 without restraints) Performing minimization step: 991. Total energy = 1553.6086 kcal/mol (1549.0299 without restraints) Performing minimization step: 992. Total energy = 1553.4132 kcal/mol (1548.8374 without restraints) Performing minimization step: 993. Total energy = 1553.2183 kcal/mol (1548.6453 without restraints) Performing minimization step: 994. Total energy = 1553.0236 kcal/mol (1548.4536 without restraints) Performing minimization step: 995. Total energy = 1552.8292 kcal/mol (1548.2620 without restraints) Performing minimization step: 996. Total energy = 1552.6352 kcal/mol (1548.0710 without restraints) Performing minimization step: 997. Total energy = 1552.4415 kcal/mol (1547.8802 without restraints) Performing minimization step: 998. Total energy = 1552.2483 kcal/mol (1547.6900 without restraints) Performing minimization step: 999. Total energy = 1552.0553 kcal/mol (1547.4998 without restraints) Performing minimization step: 1000. Total energy = 1551.8629 kcal/mol (1547.3103 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/f42e8b68/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 1001. Total energy = 1551.6708 kcal/mol (1547.1210 without restraints) Performing minimization step: 1002. Total energy = 1551.4790 kcal/mol (1546.9322 without restraints) Performing minimization step: 1003. Total energy = 1551.2873 kcal/mol (1546.7433 without restraints) Performing minimization step: 1004. Total energy = 1551.0959 kcal/mol (1546.5549 without restraints) Performing minimization step: 1005. Total energy = 1550.9050 kcal/mol (1546.3669 without restraints) Performing minimization step: 1006. Total energy = 1550.7143 kcal/mol (1546.1791 without restraints) Performing minimization step: 1007. Total energy = 1550.5237 kcal/mol (1545.9913 without restraints) Performing minimization step: 1008. Total energy = 1550.3339 kcal/mol (1545.8044 without restraints) Performing minimization step: 1009. Total energy = 1550.1444 kcal/mol (1545.6178 without restraints) Performing minimization step: 1010. Total energy = 1549.9554 kcal/mol (1545.4317 without restraints) Performing minimization step: 1011. Total energy = 1549.7666 kcal/mol (1545.2457 without restraints) Performing minimization step: 1012. Total energy = 1549.5781 kcal/mol (1545.0601 without restraints) Performing minimization step: 1013. Total energy = 1549.3899 kcal/mol (1544.8748 without restraints) Performing minimization step: 1014. Total energy = 1549.2019 kcal/mol (1544.6896 without restraints) Performing minimization step: 1015. Total energy = 1549.0148 kcal/mol (1544.5053 without restraints) Performing minimization step: 1016. Total energy = 1548.8276 kcal/mol (1544.3210 without restraints) Performing minimization step: 1017. Total energy = 1548.6408 kcal/mol (1544.1370 without restraints) Performing minimization step: 1018. Total energy = 1548.4543 kcal/mol (1543.9533 without restraints) Performing minimization step: 1019. Total energy = 1548.2678 kcal/mol (1543.7697 without restraints) Performing minimization step: 1020. Total energy = 1548.0822 kcal/mol (1543.5869 without restraints) Performing minimization step: 1021. Total energy = 1547.8966 kcal/mol (1543.4041 without restraints) Performing minimization step: 1022. Total energy = 1547.7113 kcal/mol (1543.2217 without restraints) Performing minimization step: 1023. Total energy = 1547.5264 kcal/mol (1543.0396 without restraints) Performing minimization step: 1024. Total energy = 1547.3418 kcal/mol (1542.8578 without restraints) Performing minimization step: 1025. Total energy = 1547.1575 kcal/mol (1542.6763 without restraints) Performing minimization step: 1026. Total energy = 1546.9735 kcal/mol (1542.4952 without restraints) Performing minimization step: 1027. Total energy = 1546.7898 kcal/mol (1542.3142 without restraints) Performing minimization step: 1028. Total energy = 1546.6064 kcal/mol (1542.1336 without restraints) Performing minimization step: 1029. Total energy = 1546.4234 kcal/mol (1541.9534 without restraints) Performing minimization step: 1030. Total energy = 1546.2406 kcal/mol (1541.7734 without restraints) Performing minimization step: 1031. Total energy = 1546.0581 kcal/mol (1541.5937 without restraints) Performing minimization step: 1032. Total energy = 1545.8760 kcal/mol (1541.4144 without restraints) Performing minimization step: 1033. Total energy = 1545.6945 kcal/mol (1541.2358 without restraints) Performing minimization step: 1034. Total energy = 1545.5131 kcal/mol (1541.0571 without restraints) Performing minimization step: 1035. Total energy = 1545.3316 kcal/mol (1540.8784 without restraints) Performing minimization step: 1036. Total energy = 1545.1504 kcal/mol (1540.7000 without restraints) Performing minimization step: 1037. Total energy = 1544.9698 kcal/mol (1540.5221 without restraints) Performing minimization step: 1038. Total energy = 1544.7894 kcal/mol (1540.3444 without restraints) Performing minimization step: 1039. Total energy = 1544.6092 kcal/mol (1540.1671 without restraints) Performing minimization step: 1040. Total energy = 1544.4295 kcal/mol (1539.9901 without restraints) Performing minimization step: 1041. Total energy = 1544.2502 kcal/mol (1539.8136 without restraints) Performing minimization step: 1042. Total energy = 1544.0712 kcal/mol (1539.6374 without restraints) Performing minimization step: 1043. Total energy = 1543.8924 kcal/mol (1539.4613 without restraints) Performing minimization step: 1044. Total energy = 1543.7137 kcal/mol (1539.2853 without restraints) Performing minimization step: 1045. Total energy = 1543.5354 kcal/mol (1539.1098 without restraints) Performing minimization step: 1046. Total energy = 1543.3572 kcal/mol (1538.9343 without restraints) Performing minimization step: 1047. Total energy = 1543.1794 kcal/mol (1538.7593 without restraints) Performing minimization step: 1048. Total energy = 1543.0020 kcal/mol (1538.5846 without restraints) Performing minimization step: 1049. Total energy = 1542.8248 kcal/mol (1538.4102 without restraints) Performing minimization step: 1050. Total energy = 1542.6480 kcal/mol (1538.2361 without restraints) Performing minimization step: 1051. Total energy = 1542.4713 kcal/mol (1538.0622 without restraints) Performing minimization step: 1052. Total energy = 1542.2949 kcal/mol (1537.8883 without restraints) Performing minimization step: 1053. Total energy = 1542.1190 kcal/mol (1537.7153 without restraints) Performing minimization step: 1054. Total energy = 1541.9433 kcal/mol (1537.5423 without restraints) Performing minimization step: 1055. Total energy = 1541.7679 kcal/mol (1537.3696 without restraints) Performing minimization step: 1056. Total energy = 1541.5926 kcal/mol (1537.1970 without restraints) Performing minimization step: 1057. Total energy = 1541.4177 kcal/mol (1537.0247 without restraints) Performing minimization step: 1058. Total energy = 1541.2429 kcal/mol (1536.8527 without restraints) Performing minimization step: 1059. Total energy = 1541.0685 kcal/mol (1536.6811 without restraints) Performing minimization step: 1060. Total energy = 1540.8947 kcal/mol (1536.5099 without restraints) Performing minimization step: 1061. Total energy = 1540.7213 kcal/mol (1536.3392 without restraints) Performing minimization step: 1062. Total energy = 1540.5478 kcal/mol (1536.1684 without restraints) Performing minimization step: 1063. Total energy = 1540.3743 kcal/mol (1535.9976 without restraints) Performing minimization step: 1064. Total energy = 1540.2013 kcal/mol (1535.8273 without restraints) Performing minimization step: 1065. Total energy = 1540.0285 kcal/mol (1535.6572 without restraints) Performing minimization step: 1066. Total energy = 1539.8560 kcal/mol (1535.4873 without restraints) Performing minimization step: 1067. Total energy = 1539.6841 kcal/mol (1535.3181 without restraints) Performing minimization step: 1068. Total energy = 1539.5119 kcal/mol (1535.1485 without restraints) Performing minimization step: 1069. Total energy = 1539.3401 kcal/mol (1534.9795 without restraints) Performing minimization step: 1070. Total energy = 1539.1687 kcal/mol (1534.8106 without restraints) Performing minimization step: 1071. Total energy = 1538.9976 kcal/mol (1534.6422 without restraints) Performing minimization step: 1072. Total energy = 1538.8268 kcal/mol (1534.4741 without restraints) Performing minimization step: 1073. Total energy = 1538.6561 kcal/mol (1534.3060 without restraints) Performing minimization step: 1074. Total energy = 1538.4856 kcal/mol (1534.1382 without restraints) Performing minimization step: 1075. Total energy = 1538.3158 kcal/mol (1533.9711 without restraints) Performing minimization step: 1076. Total energy = 1538.1461 kcal/mol (1533.8040 without restraints) Performing minimization step: 1077. Total energy = 1537.9764 kcal/mol (1533.6369 without restraints) Performing minimization step: 1078. Total energy = 1537.8067 kcal/mol (1533.4699 without restraints) Performing minimization step: 1079. Total energy = 1537.6375 kcal/mol (1533.3033 without restraints) Performing minimization step: 1080. Total energy = 1537.4685 kcal/mol (1533.1369 without restraints) Performing minimization step: 1081. Total energy = 1537.2998 kcal/mol (1532.9709 without restraints) Performing minimization step: 1082. Total energy = 1537.1315 kcal/mol (1532.8052 without restraints) Performing minimization step: 1083. Total energy = 1536.9629 kcal/mol (1532.6392 without restraints) Performing minimization step: 1084. Total energy = 1536.7946 kcal/mol (1532.4736 without restraints) Performing minimization step: 1085. Total energy = 1536.6270 kcal/mol (1532.3085 without restraints) Performing minimization step: 1086. Total energy = 1536.4593 kcal/mol (1532.1434 without restraints) Performing minimization step: 1087. Total energy = 1536.2918 kcal/mol (1531.9785 without restraints) Performing minimization step: 1088. Total energy = 1536.1248 kcal/mol (1531.8141 without restraints) Performing minimization step: 1089. Total energy = 1535.9580 kcal/mol (1531.6499 without restraints) Performing minimization step: 1090. Total energy = 1535.7914 kcal/mol (1531.4859 without restraints) Performing minimization step: 1091. Total energy = 1535.6251 kcal/mol (1531.3223 without restraints) Performing minimization step: 1092. Total energy = 1535.4591 kcal/mol (1531.1588 without restraints) Performing minimization step: 1093. Total energy = 1535.2933 kcal/mol (1530.9956 without restraints) Performing minimization step: 1094. Total energy = 1535.1276 kcal/mol (1530.8324 without restraints) Performing minimization step: 1095. Total energy = 1534.9622 kcal/mol (1530.6696 without restraints) Performing minimization step: 1096. Total energy = 1534.7971 kcal/mol (1530.5071 without restraints) Performing minimization step: 1097. Total energy = 1534.6321 kcal/mol (1530.3445 without restraints) Performing minimization step: 1098. Total energy = 1534.4672 kcal/mol (1530.1824 without restraints) Performing minimization step: 1099. Total energy = 1534.3028 kcal/mol (1530.0205 without restraints) Performing minimization step: 1100. Total energy = 1534.1386 kcal/mol (1529.8589 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/f42e8b68/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 1101. Total energy = 1533.9744 kcal/mol (1529.6973 without restraints) Performing minimization step: 1102. Total energy = 1533.8107 kcal/mol (1529.5361 without restraints) Performing minimization step: 1103. Total energy = 1533.6475 kcal/mol (1529.3754 without restraints) Performing minimization step: 1104. Total energy = 1533.4843 kcal/mol (1529.2147 without restraints) Performing minimization step: 1105. Total energy = 1533.3214 kcal/mol (1529.0542 without restraints) Performing minimization step: 1106. Total energy = 1533.1584 kcal/mol (1528.8939 without restraints) Performing minimization step: 1107. Total energy = 1532.9959 kcal/mol (1528.7340 without restraints) Performing minimization step: 1108. Total energy = 1532.8335 kcal/mol (1528.5741 without restraints) Performing minimization step: 1109. Total energy = 1532.6715 kcal/mol (1528.4149 without restraints) Performing minimization step: 1110. Total energy = 1532.5099 kcal/mol (1528.2556 without restraints) Performing minimization step: 1111. Total energy = 1532.3483 kcal/mol (1528.0966 without restraints) Performing minimization step: 1112. Total energy = 1532.1868 kcal/mol (1527.9375 without restraints) Performing minimization step: 1113. Total energy = 1532.0255 kcal/mol (1527.7788 without restraints) Performing minimization step: 1114. Total energy = 1531.8647 kcal/mol (1527.6204 without restraints) Performing minimization step: 1115. Total energy = 1531.7038 kcal/mol (1527.4620 without restraints) Performing minimization step: 1116. Total energy = 1531.5433 kcal/mol (1527.3040 without restraints) Performing minimization step: 1117. Total energy = 1531.3828 kcal/mol (1527.1461 without restraints) Performing minimization step: 1118. Total energy = 1531.2225 kcal/mol (1526.9882 without restraints) Performing minimization step: 1119. Total energy = 1531.0628 kcal/mol (1526.8311 without restraints) Performing minimization step: 1120. Total energy = 1530.9030 kcal/mol (1526.6737 without restraints) Performing minimization step: 1121. Total energy = 1530.7433 kcal/mol (1526.5165 without restraints) Performing minimization step: 1122. Total energy = 1530.5838 kcal/mol (1526.3596 without restraints) Performing minimization step: 1123. Total energy = 1530.4246 kcal/mol (1526.2028 without restraints) Performing minimization step: 1124. Total energy = 1530.2654 kcal/mol (1526.0461 without restraints) Performing minimization step: 1125. Total energy = 1530.1066 kcal/mol (1525.8898 without restraints) Performing minimization step: 1126. Total energy = 1529.9481 kcal/mol (1525.7337 without restraints) Performing minimization step: 1127. Total energy = 1529.7898 kcal/mol (1525.5780 without restraints) Performing minimization step: 1128. Total energy = 1529.6315 kcal/mol (1525.4221 without restraints) Performing minimization step: 1129. Total energy = 1529.4734 kcal/mol (1525.2664 without restraints) Performing minimization step: 1130. Total energy = 1529.3155 kcal/mol (1525.1110 without restraints) Performing minimization step: 1131. Total energy = 1529.1578 kcal/mol (1524.9559 without restraints) Performing minimization step: 1132. Total energy = 1529.0004 kcal/mol (1524.8007 without restraints) Performing minimization step: 1133. Total energy = 1528.8431 kcal/mol (1524.6460 without restraints) Performing minimization step: 1134. Total energy = 1528.6860 kcal/mol (1524.4913 without restraints) Performing minimization step: 1135. Total energy = 1528.5297 kcal/mol (1524.3374 without restraints) Performing minimization step: 1136. Total energy = 1528.3728 kcal/mol (1524.1828 without restraints) Performing minimization step: 1137. Total energy = 1528.2165 kcal/mol (1524.0291 without restraints) Performing minimization step: 1138. Total energy = 1528.0602 kcal/mol (1523.8752 without restraints) Performing minimization step: 1139. Total energy = 1527.9041 kcal/mol (1523.7215 without restraints) Performing minimization step: 1140. Total energy = 1527.7482 kcal/mol (1523.5681 without restraints) Performing minimization step: 1141. Total energy = 1527.5925 kcal/mol (1523.4149 without restraints) Performing minimization step: 1142. Total energy = 1527.4371 kcal/mol (1523.2619 without restraints) Performing minimization step: 1143. Total energy = 1527.2818 kcal/mol (1523.1089 without restraints) Performing minimization step: 1144. Total energy = 1527.1266 kcal/mol (1522.9561 without restraints) Performing minimization step: 1145. Total energy = 1526.9714 kcal/mol (1522.8033 without restraints) Performing minimization step: 1146. Total energy = 1526.8167 kcal/mol (1522.6511 without restraints) Performing minimization step: 1147. Total energy = 1526.6620 kcal/mol (1522.4988 without restraints) Performing minimization step: 1148. Total energy = 1526.5077 kcal/mol (1522.3469 without restraints) Performing minimization step: 1149. Total energy = 1526.3535 kcal/mol (1522.1951 without restraints) Performing minimization step: 1150. Total energy = 1526.1995 kcal/mol (1522.0433 without restraints) Performing minimization step: 1151. Total energy = 1526.0454 kcal/mol (1521.8917 without restraints) Performing minimization step: 1152. Total energy = 1525.8918 kcal/mol (1521.7405 without restraints) Performing minimization step: 1153. Total energy = 1525.7384 kcal/mol (1521.5896 without restraints) Performing minimization step: 1154. Total energy = 1525.5852 kcal/mol (1521.4387 without restraints) Performing minimization step: 1155. Total energy = 1525.4317 kcal/mol (1521.2876 without restraints) Performing minimization step: 1156. Total energy = 1525.2791 kcal/mol (1521.1374 without restraints) Performing minimization step: 1157. Total energy = 1525.1264 kcal/mol (1520.9870 without restraints) Performing minimization step: 1158. Total energy = 1524.9737 kcal/mol (1520.8367 without restraints) Performing minimization step: 1159. Total energy = 1524.8212 kcal/mol (1520.6866 without restraints) Performing minimization step: 1160. Total energy = 1524.6687 kcal/mol (1520.5364 without restraints) Performing minimization step: 1161. Total energy = 1524.5168 kcal/mol (1520.3869 without restraints) Performing minimization step: 1162. Total energy = 1524.3650 kcal/mol (1520.2375 without restraints) Performing minimization step: 1163. Total energy = 1524.2134 kcal/mol (1520.0882 without restraints) Performing minimization step: 1164. Total energy = 1524.0620 kcal/mol (1519.9392 without restraints) Performing minimization step: 1165. Total energy = 1523.9108 kcal/mol (1519.7903 without restraints) Performing minimization step: 1166. Total energy = 1523.7597 kcal/mol (1519.6415 without restraints) Performing minimization step: 1167. Total energy = 1523.6088 kcal/mol (1519.4930 without restraints) Performing minimization step: 1168. Total energy = 1523.4583 kcal/mol (1519.3448 without restraints) Performing minimization step: 1169. Total energy = 1523.3078 kcal/mol (1519.1966 without restraints) Performing minimization step: 1170. Total energy = 1523.1573 kcal/mol (1519.0484 without restraints) Performing minimization step: 1171. Total energy = 1523.0069 kcal/mol (1518.9003 without restraints) Performing minimization step: 1172. Total energy = 1522.8568 kcal/mol (1518.7526 without restraints) Performing minimization step: 1173. Total energy = 1522.7068 kcal/mol (1518.6048 without restraints) Performing minimization step: 1174. Total energy = 1522.5571 kcal/mol (1518.4577 without restraints) Performing minimization step: 1175. Total energy = 1522.4077 kcal/mol (1518.3104 without restraints) Performing minimization step: 1176. Total energy = 1522.2584 kcal/mol (1518.1634 without restraints) Performing minimization step: 1177. Total energy = 1522.1092 kcal/mol (1518.0165 without restraints) Performing minimization step: 1178. Total energy = 1521.9602 kcal/mol (1517.8698 without restraints) Performing minimization step: 1179. Total energy = 1521.8113 kcal/mol (1517.7232 without restraints) Performing minimization step: 1180. Total energy = 1521.6619 kcal/mol (1517.5761 without restraints) Performing minimization step: 1181. Total energy = 1521.5134 kcal/mol (1517.4299 without restraints) Performing minimization step: 1182. Total energy = 1521.3650 kcal/mol (1517.2838 without restraints) Performing minimization step: 1183. Total energy = 1521.2169 kcal/mol (1517.1381 without restraints) Performing minimization step: 1184. Total energy = 1521.0691 kcal/mol (1516.9925 without restraints) Performing minimization step: 1185. Total energy = 1520.9214 kcal/mol (1516.8471 without restraints) Performing minimization step: 1186. Total energy = 1520.7739 kcal/mol (1516.7018 without restraints) Performing minimization step: 1187. Total energy = 1520.6263 kcal/mol (1516.5565 without restraints) Performing minimization step: 1188. Total energy = 1520.4787 kcal/mol (1516.4112 without restraints) Performing minimization step: 1189. Total energy = 1520.3310 kcal/mol (1516.2657 without restraints) Performing minimization step: 1190. Total energy = 1520.1839 kcal/mol (1516.1209 without restraints) Performing minimization step: 1191. Total energy = 1520.0369 kcal/mol (1515.9762 without restraints) Performing minimization step: 1192. Total energy = 1519.8901 kcal/mol (1515.8316 without restraints) Performing minimization step: 1193. Total energy = 1519.7433 kcal/mol (1515.6871 without restraints) Performing minimization step: 1194. Total energy = 1519.5970 kcal/mol (1515.5430 without restraints) Performing minimization step: 1195. Total energy = 1519.4506 kcal/mol (1515.3989 without restraints) Performing minimization step: 1196. Total energy = 1519.3045 kcal/mol (1515.2550 without restraints) Performing minimization step: 1197. Total energy = 1519.1584 kcal/mol (1515.1112 without restraints) Performing minimization step: 1198. Total energy = 1519.0127 kcal/mol (1514.9678 without restraints) Performing minimization step: 1199. Total energy = 1518.8673 kcal/mol (1514.8245 without restraints) Performing minimization step: 1200. Total energy = 1518.7217 kcal/mol (1514.6812 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/f42e8b68/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 1201. Total energy = 1518.5763 kcal/mol (1514.5380 without restraints) Performing minimization step: 1202. Total energy = 1518.4311 kcal/mol (1514.3950 without restraints) Performing minimization step: 1203. Total energy = 1518.2859 kcal/mol (1514.2519 without restraints) Performing minimization step: 1204. Total energy = 1518.1411 kcal/mol (1514.1094 without restraints) Performing minimization step: 1205. Total energy = 1517.9963 kcal/mol (1513.9669 without restraints) Performing minimization step: 1206. Total energy = 1517.8518 kcal/mol (1513.8246 without restraints) Performing minimization step: 1207. Total energy = 1517.7074 kcal/mol (1513.6824 without restraints) Performing minimization step: 1208. Total energy = 1517.5630 kcal/mol (1513.5402 without restraints) Performing minimization step: 1209. Total energy = 1517.4188 kcal/mol (1513.3982 without restraints) Performing minimization step: 1210. Total energy = 1517.2749 kcal/mol (1513.2566 without restraints) Performing minimization step: 1211. Total energy = 1517.1312 kcal/mol (1513.1150 without restraints) Performing minimization step: 1212. Total energy = 1516.9875 kcal/mol (1512.9735 without restraints) Performing minimization step: 1213. Total energy = 1516.8438 kcal/mol (1512.8321 without restraints) Performing minimization step: 1214. Total energy = 1516.7004 kcal/mol (1512.6908 without restraints) Performing minimization step: 1215. Total energy = 1516.5570 kcal/mol (1512.5496 without restraints) Performing minimization step: 1216. Total energy = 1516.4134 kcal/mol (1512.4082 without restraints) Performing minimization step: 1217. Total energy = 1516.2704 kcal/mol (1512.2673 without restraints) Performing minimization step: 1218. Total energy = 1516.1276 kcal/mol (1512.1268 without restraints) Performing minimization step: 1219. Total energy = 1515.9849 kcal/mol (1511.9862 without restraints) Performing minimization step: 1220. Total energy = 1515.8421 kcal/mol (1511.8455 without restraints) Performing minimization step: 1221. Total energy = 1515.6996 kcal/mol (1511.7052 without restraints) Performing minimization step: 1222. Total energy = 1515.5572 kcal/mol (1511.5650 without restraints) Performing minimization step: 1223. Total energy = 1515.4147 kcal/mol (1511.4247 without restraints) Performing minimization step: 1224. Total energy = 1515.2726 kcal/mol (1511.2847 without restraints) Performing minimization step: 1225. Total energy = 1515.1306 kcal/mol (1511.1449 without restraints) Performing minimization step: 1226. Total energy = 1514.9886 kcal/mol (1511.0050 without restraints) Performing minimization step: 1227. Total energy = 1514.8472 kcal/mol (1510.8658 without restraints) Performing minimization step: 1228. Total energy = 1514.7057 kcal/mol (1510.7264 without restraints) Performing minimization step: 1229. Total energy = 1514.5643 kcal/mol (1510.5872 without restraints) Performing minimization step: 1230. Total energy = 1514.4230 kcal/mol (1510.4480 without restraints) Performing minimization step: 1231. Total energy = 1514.2821 kcal/mol (1510.3093 without restraints) Performing minimization step: 1232. Total energy = 1514.1412 kcal/mol (1510.1705 without restraints) Performing minimization step: 1233. Total energy = 1514.0002 kcal/mol (1510.0315 without restraints) Performing minimization step: 1234. Total energy = 1513.8593 kcal/mol (1509.8928 without restraints) Performing minimization step: 1235. Total energy = 1513.7187 kcal/mol (1509.7544 without restraints) Performing minimization step: 1236. Total energy = 1513.5782 kcal/mol (1509.6160 without restraints) Performing minimization step: 1237. Total energy = 1513.4379 kcal/mol (1509.4778 without restraints) Performing minimization step: 1238. Total energy = 1513.2974 kcal/mol (1509.3393 without restraints) Performing minimization step: 1239. Total energy = 1513.1572 kcal/mol (1509.2014 without restraints) Performing minimization step: 1240. Total energy = 1513.0172 kcal/mol (1509.0636 without restraints) Performing minimization step: 1241. Total energy = 1512.8767 kcal/mol (1508.9251 without restraints) Performing minimization step: 1242. Total energy = 1512.7370 kcal/mol (1508.7876 without restraints) Performing minimization step: 1243. Total energy = 1512.5975 kcal/mol (1508.6501 without restraints) Performing minimization step: 1244. Total energy = 1512.4581 kcal/mol (1508.5128 without restraints) Performing minimization step: 1245. Total energy = 1512.3188 kcal/mol (1508.3756 without restraints) Performing minimization step: 1246. Total energy = 1512.1799 kcal/mol (1508.2387 without restraints) Performing minimization step: 1247. Total energy = 1512.0408 kcal/mol (1508.1018 without restraints) Performing minimization step: 1248. Total energy = 1511.9019 kcal/mol (1507.9650 without restraints) Performing minimization step: 1249. Total energy = 1511.7632 kcal/mol (1507.8283 without restraints) Performing minimization step: 1250. Total energy = 1511.6245 kcal/mol (1507.6918 without restraints) Performing minimization step: 1251. Total energy = 1511.4860 kcal/mol (1507.5554 without restraints) Performing minimization step: 1252. Total energy = 1511.3476 kcal/mol (1507.4189 without restraints) Performing minimization step: 1253. Total energy = 1511.2092 kcal/mol (1507.2827 without restraints) Performing minimization step: 1254. Total energy = 1511.0711 kcal/mol (1507.1467 without restraints) Performing minimization step: 1255. Total energy = 1510.9327 kcal/mol (1507.0103 without restraints) Performing minimization step: 1256. Total energy = 1510.7948 kcal/mol (1506.8745 without restraints) Performing minimization step: 1257. Total energy = 1510.6568 kcal/mol (1506.7386 without restraints) Performing minimization step: 1258. Total energy = 1510.5191 kcal/mol (1506.6030 without restraints) Performing minimization step: 1259. Total energy = 1510.3816 kcal/mol (1506.4675 without restraints) Performing minimization step: 1260. Total energy = 1510.2438 kcal/mol (1506.3318 without restraints) Performing minimization step: 1261. Total energy = 1510.1066 kcal/mol (1506.1966 without restraints) Performing minimization step: 1262. Total energy = 1509.9694 kcal/mol (1506.0615 without restraints) Performing minimization step: 1263. Total energy = 1509.8319 kcal/mol (1505.9260 without restraints) Performing minimization step: 1264. Total energy = 1509.6952 kcal/mol (1505.7914 without restraints) Performing minimization step: 1265. Total energy = 1509.5585 kcal/mol (1505.6567 without restraints) Performing minimization step: 1266. Total energy = 1509.4215 kcal/mol (1505.5218 without restraints) Performing minimization step: 1267. Total energy = 1509.2851 kcal/mol (1505.3873 without restraints) Performing minimization step: 1268. Total energy = 1509.1484 kcal/mol (1505.2527 without restraints) Performing minimization step: 1269. Total energy = 1509.0121 kcal/mol (1505.1184 without restraints) Performing minimization step: 1270. Total energy = 1508.8757 kcal/mol (1504.9840 without restraints) Performing minimization step: 1271. Total energy = 1508.7401 kcal/mol (1504.8505 without restraints) Performing minimization step: 1272. Total energy = 1508.6041 kcal/mol (1504.7165 without restraints) Performing minimization step: 1273. Total energy = 1508.4682 kcal/mol (1504.5827 without restraints) Performing minimization step: 1274. Total energy = 1508.3326 kcal/mol (1504.4490 without restraints) Performing minimization step: 1275. Total energy = 1508.1966 kcal/mol (1504.3149 without restraints) Performing minimization step: 1276. Total energy = 1508.0610 kcal/mol (1504.1815 without restraints) Performing minimization step: 1277. Total energy = 1507.9260 kcal/mol (1504.0485 without restraints) Performing minimization step: 1278. Total energy = 1507.7908 kcal/mol (1503.9152 without restraints) Performing minimization step: 1279. Total energy = 1507.6556 kcal/mol (1503.7821 without restraints) Performing minimization step: 1280. Total energy = 1507.5205 kcal/mol (1503.6490 without restraints) Performing minimization step: 1281. Total energy = 1507.3859 kcal/mol (1503.5163 without restraints) Performing minimization step: 1282. Total energy = 1507.2510 kcal/mol (1503.3835 without restraints) Performing minimization step: 1283. Total energy = 1507.1163 kcal/mol (1503.2508 without restraints) Performing minimization step: 1284. Total energy = 1506.9817 kcal/mol (1503.1182 without restraints) Performing minimization step: 1285. Total energy = 1506.8472 kcal/mol (1502.9856 without restraints) Performing minimization step: 1286. Total energy = 1506.7128 kcal/mol (1502.8532 without restraints) Performing minimization step: 1287. Total energy = 1506.5783 kcal/mol (1502.7207 without restraints) Performing minimization step: 1288. Total energy = 1506.4441 kcal/mol (1502.5885 without restraints) Performing minimization step: 1289. Total energy = 1506.3101 kcal/mol (1502.4565 without restraints) Performing minimization step: 1290. Total energy = 1506.1762 kcal/mol (1502.3245 without restraints) Performing minimization step: 1291. Total energy = 1506.0423 kcal/mol (1502.1926 without restraints) Performing minimization step: 1292. Total energy = 1505.9086 kcal/mol (1502.0609 without restraints) Performing minimization step: 1293. Total energy = 1505.7750 kcal/mol (1501.9293 without restraints) Performing minimization step: 1294. Total energy = 1505.6417 kcal/mol (1501.7979 without restraints) Performing minimization step: 1295. Total energy = 1505.5083 kcal/mol (1501.6665 without restraints) Performing minimization step: 1296. Total energy = 1505.3750 kcal/mol (1501.5352 without restraints) Performing minimization step: 1297. Total energy = 1505.2418 kcal/mol (1501.4039 without restraints) Performing minimization step: 1298. Total energy = 1505.1088 kcal/mol (1501.2729 without restraints) Performing minimization step: 1299. Total energy = 1504.9758 kcal/mol (1501.1417 without restraints) Performing minimization step: 1300. Total energy = 1504.8428 kcal/mol (1501.0108 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/f42e8b68/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 1301. Total energy = 1504.7101 kcal/mol (1500.8800 without restraints) Performing minimization step: 1302. Total energy = 1504.5770 kcal/mol (1500.7488 without restraints) Performing minimization step: 1303. Total energy = 1504.4444 kcal/mol (1500.6181 without restraints) Performing minimization step: 1304. Total energy = 1504.3119 kcal/mol (1500.4877 without restraints) Performing minimization step: 1305. Total energy = 1504.1793 kcal/mol (1500.3568 without restraints) Performing minimization step: 1306. Total energy = 1504.0468 kcal/mol (1500.2263 without restraints) Performing minimization step: 1307. Total energy = 1503.9146 kcal/mol (1500.0961 without restraints) Performing minimization step: 1308. Total energy = 1503.7827 kcal/mol (1499.9660 without restraints) Performing minimization step: 1309. Total energy = 1503.6505 kcal/mol (1499.8359 without restraints) Performing minimization step: 1310. Total energy = 1503.5187 kcal/mol (1499.7060 without restraints) Performing minimization step: 1311. Total energy = 1503.3868 kcal/mol (1499.5760 without restraints) Performing minimization step: 1312. Total energy = 1503.2553 kcal/mol (1499.4464 without restraints) Performing minimization step: 1313. Total energy = 1503.1238 kcal/mol (1499.3168 without restraints) Performing minimization step: 1314. Total energy = 1502.9923 kcal/mol (1499.1872 without restraints) Performing minimization step: 1315. Total energy = 1502.8609 kcal/mol (1499.0578 without restraints) Performing minimization step: 1316. Total energy = 1502.7296 kcal/mol (1498.9284 without restraints) Performing minimization step: 1317. Total energy = 1502.5983 kcal/mol (1498.7990 without restraints) Performing minimization step: 1318. Total energy = 1502.4671 kcal/mol (1498.6697 without restraints) Performing minimization step: 1319. Total energy = 1502.3360 kcal/mol (1498.5404 without restraints) Performing minimization step: 1320. Total energy = 1502.2052 kcal/mol (1498.4115 without restraints) Performing minimization step: 1321. Total energy = 1502.0745 kcal/mol (1498.2827 without restraints) Performing minimization step: 1322. Total energy = 1501.9439 kcal/mol (1498.1540 without restraints) Performing minimization step: 1323. Total energy = 1501.8134 kcal/mol (1498.0254 without restraints) Performing minimization step: 1324. Total energy = 1501.6832 kcal/mol (1497.8972 without restraints) Performing minimization step: 1325. Total energy = 1501.5528 kcal/mol (1497.7686 without restraints) Performing minimization step: 1326. Total energy = 1501.4227 kcal/mol (1497.6402 without restraints) Performing minimization step: 1327. Total energy = 1501.2923 kcal/mol (1497.5119 without restraints) Performing minimization step: 1328. Total energy = 1501.1625 kcal/mol (1497.3839 without restraints) Performing minimization step: 1329. Total energy = 1501.0325 kcal/mol (1497.2559 without restraints) Performing minimization step: 1330. Total energy = 1500.9033 kcal/mol (1497.1285 without restraints) Performing minimization step: 1331. Total energy = 1500.7735 kcal/mol (1497.0004 without restraints) Performing minimization step: 1332. Total energy = 1500.6437 kcal/mol (1496.8727 without restraints) Performing minimization step: 1333. Total energy = 1500.5140 kcal/mol (1496.7448 without restraints) Performing minimization step: 1334. Total energy = 1500.3844 kcal/mol (1496.6170 without restraints) Performing minimization step: 1335. Total energy = 1500.2551 kcal/mol (1496.4896 without restraints) Performing minimization step: 1336. Total energy = 1500.1261 kcal/mol (1496.3625 without restraints) Performing minimization step: 1337. Total energy = 1499.9970 kcal/mol (1496.2352 without restraints) Performing minimization step: 1338. Total energy = 1499.8679 kcal/mol (1496.1079 without restraints) Performing minimization step: 1339. Total energy = 1499.7389 kcal/mol (1495.9808 without restraints) Performing minimization step: 1340. Total energy = 1499.6101 kcal/mol (1495.8538 without restraints) Performing minimization step: 1341. Total energy = 1499.4813 kcal/mol (1495.7269 without restraints) Performing minimization step: 1342. Total energy = 1499.3524 kcal/mol (1495.5999 without restraints) Performing minimization step: 1343. Total energy = 1499.2236 kcal/mol (1495.4729 without restraints) Performing minimization step: 1344. Total energy = 1499.0951 kcal/mol (1495.3463 without restraints) Performing minimization step: 1345. Total energy = 1498.9667 kcal/mol (1495.2197 without restraints) Performing minimization step: 1346. Total energy = 1498.8382 kcal/mol (1495.0930 without restraints) Performing minimization step: 1347. Total energy = 1498.7100 kcal/mol (1494.9666 without restraints) Performing minimization step: 1348. Total energy = 1498.5819 kcal/mol (1494.8404 without restraints) Performing minimization step: 1349. Total energy = 1498.4535 kcal/mol (1494.7138 without restraints) Performing minimization step: 1350. Total energy = 1498.3258 kcal/mol (1494.5879 without restraints) Performing minimization step: 1351. Total energy = 1498.1979 kcal/mol (1494.4619 without restraints) Performing minimization step: 1352. Total energy = 1498.0702 kcal/mol (1494.3359 without restraints) Performing minimization step: 1353. Total energy = 1497.9425 kcal/mol (1494.2101 without restraints) Performing minimization step: 1354. Total energy = 1497.8152 kcal/mol (1494.0846 without restraints) Performing minimization step: 1355. Total energy = 1497.6877 kcal/mol (1493.9589 without restraints) Performing minimization step: 1356. Total energy = 1497.5605 kcal/mol (1493.8335 without restraints) Performing minimization step: 1357. Total energy = 1497.4330 kcal/mol (1493.7078 without restraints) Performing minimization step: 1358. Total energy = 1497.3056 kcal/mol (1493.5822 without restraints) Performing minimization step: 1359. Total energy = 1497.1785 kcal/mol (1493.4569 without restraints) Performing minimization step: 1360. Total energy = 1497.0510 kcal/mol (1493.3311 without restraints) Performing minimization step: 1361. Total energy = 1496.9240 kcal/mol (1493.2060 without restraints) Performing minimization step: 1362. Total energy = 1496.7970 kcal/mol (1493.0808 without restraints) Performing minimization step: 1363. Total energy = 1496.6700 kcal/mol (1492.9556 without restraints) Performing minimization step: 1364. Total energy = 1496.5433 kcal/mol (1492.8307 without restraints) Performing minimization step: 1365. Total energy = 1496.4166 kcal/mol (1492.7058 without restraints) Performing minimization step: 1366. Total energy = 1496.2899 kcal/mol (1492.5809 without restraints) Performing minimization step: 1367. Total energy = 1496.1634 kcal/mol (1492.4560 without restraints) Performing minimization step: 1368. Total energy = 1496.0369 kcal/mol (1492.3314 without restraints) Performing minimization step: 1369. Total energy = 1495.9106 kcal/mol (1492.2070 without restraints) Performing minimization step: 1370. Total energy = 1495.7846 kcal/mol (1492.0827 without restraints) Performing minimization step: 1371. Total energy = 1495.6585 kcal/mol (1491.9583 without restraints) Performing minimization step: 1372. Total energy = 1495.5325 kcal/mol (1491.8341 without restraints) Performing minimization step: 1373. Total energy = 1495.4066 kcal/mol (1491.7102 without restraints) Performing minimization step: 1374. Total energy = 1495.2807 kcal/mol (1491.5859 without restraints) Performing minimization step: 1375. Total energy = 1495.1549 kcal/mol (1491.4619 without restraints) Performing minimization step: 1376. Total energy = 1495.0291 kcal/mol (1491.3378 without restraints) Performing minimization step: 1377. Total energy = 1494.9032 kcal/mol (1491.2137 without restraints) Performing minimization step: 1378. Total energy = 1494.7777 kcal/mol (1491.0899 without restraints) Performing minimization step: 1379. Total energy = 1494.6522 kcal/mol (1490.9662 without restraints) Performing minimization step: 1380. Total energy = 1494.5263 kcal/mol (1490.8420 without restraints) Performing minimization step: 1381. Total energy = 1494.4012 kcal/mol (1490.7187 without restraints) Performing minimization step: 1382. Total energy = 1494.2760 kcal/mol (1490.5952 without restraints) Performing minimization step: 1383. Total energy = 1494.1509 kcal/mol (1490.4719 without restraints) Performing minimization step: 1384. Total energy = 1494.0257 kcal/mol (1490.3484 without restraints) Performing minimization step: 1385. Total energy = 1493.9006 kcal/mol (1490.2251 without restraints) Performing minimization step: 1386. Total energy = 1493.7758 kcal/mol (1490.1020 without restraints) Performing minimization step: 1387. Total energy = 1493.6512 kcal/mol (1489.9791 without restraints) Performing minimization step: 1388. Total energy = 1493.5264 kcal/mol (1489.8561 without restraints) Performing minimization step: 1389. Total energy = 1493.4014 kcal/mol (1489.7329 without restraints) Performing minimization step: 1390. Total energy = 1493.2769 kcal/mol (1489.6101 without restraints) Performing minimization step: 1391. Total energy = 1493.1527 kcal/mol (1489.4876 without restraints) Performing minimization step: 1392. Total energy = 1493.0283 kcal/mol (1489.3649 without restraints) Performing minimization step: 1393. Total energy = 1492.9040 kcal/mol (1489.2424 without restraints) Performing minimization step: 1394. Total energy = 1492.7798 kcal/mol (1489.1199 without restraints) Performing minimization step: 1395. Total energy = 1492.6558 kcal/mol (1488.9976 without restraints) Performing minimization step: 1396. Total energy = 1492.5315 kcal/mol (1488.8750 without restraints) Performing minimization step: 1397. Total energy = 1492.4073 kcal/mol (1488.7525 without restraints) Performing minimization step: 1398. Total energy = 1492.2834 kcal/mol (1488.6303 without restraints) Performing minimization step: 1399. Total energy = 1492.1596 kcal/mol (1488.5082 without restraints) Performing minimization step: 1400. Total energy = 1492.0357 kcal/mol (1488.3860 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/f42e8b68/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 1401. Total energy = 1491.9120 kcal/mol (1488.2642 without restraints) Performing minimization step: 1402. Total energy = 1491.7883 kcal/mol (1488.1421 without restraints) Performing minimization step: 1403. Total energy = 1491.6650 kcal/mol (1488.0205 without restraints) Performing minimization step: 1404. Total energy = 1491.5416 kcal/mol (1487.8988 without restraints) Performing minimization step: 1405. Total energy = 1491.4182 kcal/mol (1487.7771 without restraints) Performing minimization step: 1406. Total energy = 1491.2950 kcal/mol (1487.6556 without restraints) Performing minimization step: 1407. Total energy = 1491.1718 kcal/mol (1487.5341 without restraints) Performing minimization step: 1408. Total energy = 1491.0488 kcal/mol (1487.4129 without restraints) Performing minimization step: 1409. Total energy = 1490.9259 kcal/mol (1487.2915 without restraints) Performing minimization step: 1410. Total energy = 1490.8029 kcal/mol (1487.1703 without restraints) Performing minimization step: 1411. Total energy = 1490.6800 kcal/mol (1487.0491 without restraints) Performing minimization step: 1412. Total energy = 1490.5572 kcal/mol (1486.9279 without restraints) Performing minimization step: 1413. Total energy = 1490.4343 kcal/mol (1486.8069 without restraints) Performing minimization step: 1414. Total energy = 1490.3117 kcal/mol (1486.6859 without restraints) Performing minimization step: 1415. Total energy = 1490.1893 kcal/mol (1486.5652 without restraints) Performing minimization step: 1416. Total energy = 1490.0669 kcal/mol (1486.4444 without restraints) Performing minimization step: 1417. Total energy = 1489.9445 kcal/mol (1486.3236 without restraints) Performing minimization step: 1418. Total energy = 1489.8222 kcal/mol (1486.2030 without restraints) Performing minimization step: 1419. Total energy = 1489.6999 kcal/mol (1486.0824 without restraints) Performing minimization step: 1420. Total energy = 1489.5776 kcal/mol (1485.9617 without restraints) Performing minimization step: 1421. Total energy = 1489.4554 kcal/mol (1485.8412 without restraints) Performing minimization step: 1422. Total energy = 1489.3331 kcal/mol (1485.7206 without restraints) Performing minimization step: 1423. Total energy = 1489.2111 kcal/mol (1485.6003 without restraints) Performing minimization step: 1424. Total energy = 1489.0892 kcal/mol (1485.4800 without restraints) Performing minimization step: 1425. Total energy = 1488.9674 kcal/mol (1485.3598 without restraints) Performing minimization step: 1426. Total energy = 1488.8456 kcal/mol (1485.2398 without restraints) Performing minimization step: 1427. Total energy = 1488.7240 kcal/mol (1485.1199 without restraints) Performing minimization step: 1428. Total energy = 1488.6025 kcal/mol (1484.9999 without restraints) Performing minimization step: 1429. Total energy = 1488.4810 kcal/mol (1484.8801 without restraints) Performing minimization step: 1430. Total energy = 1488.3595 kcal/mol (1484.7603 without restraints) Performing minimization step: 1431. Total energy = 1488.2385 kcal/mol (1484.6410 without restraints) Performing minimization step: 1432. Total energy = 1488.1166 kcal/mol (1484.5206 without restraints) Performing minimization step: 1433. Total energy = 1487.9956 kcal/mol (1484.4013 without restraints) Performing minimization step: 1434. Total energy = 1487.8745 kcal/mol (1484.2818 without restraints) Performing minimization step: 1435. Total energy = 1487.7532 kcal/mol (1484.1621 without restraints) Performing minimization step: 1436. Total energy = 1487.6321 kcal/mol (1484.0427 without restraints) Performing minimization step: 1437. Total energy = 1487.5111 kcal/mol (1483.9234 without restraints) Performing minimization step: 1438. Total energy = 1487.3902 kcal/mol (1483.8041 without restraints) Performing minimization step: 1439. Total energy = 1487.2694 kcal/mol (1483.6849 without restraints) Performing minimization step: 1440. Total energy = 1487.1485 kcal/mol (1483.5655 without restraints) Performing minimization step: 1441. Total energy = 1487.0276 kcal/mol (1483.4463 without restraints) Performing minimization step: 1442. Total energy = 1486.9068 kcal/mol (1483.3271 without restraints) Performing minimization step: 1443. Total energy = 1486.7862 kcal/mol (1483.2082 without restraints) Performing minimization step: 1444. Total energy = 1486.6655 kcal/mol (1483.0891 without restraints) Performing minimization step: 1445. Total energy = 1486.5451 kcal/mol (1482.9703 without restraints) Performing minimization step: 1446. Total energy = 1486.4247 kcal/mol (1482.8516 without restraints) Performing minimization step: 1447. Total energy = 1486.3045 kcal/mol (1482.7329 without restraints) Performing minimization step: 1448. Total energy = 1486.1844 kcal/mol (1482.6145 without restraints) Performing minimization step: 1449. Total energy = 1486.0645 kcal/mol (1482.4962 without restraints) Performing minimization step: 1450. Total energy = 1485.9442 kcal/mol (1482.3776 without restraints) Performing minimization step: 1451. Total energy = 1485.8242 kcal/mol (1482.2591 without restraints) Performing minimization step: 1452. Total energy = 1485.7043 kcal/mol (1482.1408 without restraints) Performing minimization step: 1453. Total energy = 1485.5844 kcal/mol (1482.0226 without restraints) Performing minimization step: 1454. Total energy = 1485.4646 kcal/mol (1481.9044 without restraints) Performing minimization step: 1455. Total energy = 1485.3449 kcal/mol (1481.7862 without restraints) Performing minimization step: 1456. Total energy = 1485.2252 kcal/mol (1481.6681 without restraints) Performing minimization step: 1457. Total energy = 1485.1056 kcal/mol (1481.5501 without restraints) Performing minimization step: 1458. Total energy = 1484.9859 kcal/mol (1481.4320 without restraints) Performing minimization step: 1459. Total energy = 1484.8664 kcal/mol (1481.3141 without restraints) Performing minimization step: 1460. Total energy = 1484.7471 kcal/mol (1481.1964 without restraints) Performing minimization step: 1461. Total energy = 1484.6278 kcal/mol (1481.0787 without restraints) Performing minimization step: 1462. Total energy = 1484.5086 kcal/mol (1480.9610 without restraints) Performing minimization step: 1463. Total energy = 1484.3893 kcal/mol (1480.8434 without restraints) Performing minimization step: 1464. Total energy = 1484.2701 kcal/mol (1480.7258 without restraints) Performing minimization step: 1465. Total energy = 1484.1511 kcal/mol (1480.6083 without restraints) Performing minimization step: 1466. Total energy = 1484.0321 kcal/mol (1480.4909 without restraints) Performing minimization step: 1467. Total energy = 1483.9127 kcal/mol (1480.3731 without restraints) Performing minimization step: 1468. Total energy = 1483.7937 kcal/mol (1480.2556 without restraints) Performing minimization step: 1469. Total energy = 1483.6746 kcal/mol (1480.1381 without restraints) Performing minimization step: 1470. Total energy = 1483.5558 kcal/mol (1480.0209 without restraints) Performing minimization step: 1471. Total energy = 1483.4372 kcal/mol (1479.9038 without restraints) Performing minimization step: 1472. Total energy = 1483.3185 kcal/mol (1479.7867 without restraints) Performing minimization step: 1473. Total energy = 1483.1995 kcal/mol (1479.6693 without restraints) Performing minimization step: 1474. Total energy = 1483.0809 kcal/mol (1479.5521 without restraints) Performing minimization step: 1475. Total energy = 1482.9619 kcal/mol (1479.4348 without restraints) Performing minimization step: 1476. Total energy = 1482.8434 kcal/mol (1479.3180 without restraints) Performing minimization step: 1477. Total energy = 1482.7252 kcal/mol (1479.2013 without restraints) Performing minimization step: 1478. Total energy = 1482.6070 kcal/mol (1479.0846 without restraints) Performing minimization step: 1479. Total energy = 1482.4887 kcal/mol (1478.9678 without restraints) Performing minimization step: 1480. Total energy = 1482.3706 kcal/mol (1478.8513 without restraints) Performing minimization step: 1481. Total energy = 1482.2525 kcal/mol (1478.7347 without restraints) Performing minimization step: 1482. Total energy = 1482.1345 kcal/mol (1478.6183 without restraints) Performing minimization step: 1483. Total energy = 1482.0166 kcal/mol (1478.5021 without restraints) Performing minimization step: 1484. Total energy = 1481.8989 kcal/mol (1478.3858 without restraints) Performing minimization step: 1485. Total energy = 1481.7810 kcal/mol (1478.2694 without restraints) Performing minimization step: 1486. Total energy = 1481.6633 kcal/mol (1478.1532 without restraints) Performing minimization step: 1487. Total energy = 1481.5456 kcal/mol (1478.0371 without restraints) Performing minimization step: 1488. Total energy = 1481.4279 kcal/mol (1477.9210 without restraints) Performing minimization step: 1489. Total energy = 1481.3104 kcal/mol (1477.8050 without restraints) Performing minimization step: 1490. Total energy = 1481.1929 kcal/mol (1477.6890 without restraints) Performing minimization step: 1491. Total energy = 1481.0753 kcal/mol (1477.5728 without restraints) Performing minimization step: 1492. Total energy = 1480.9578 kcal/mol (1477.4570 without restraints) Performing minimization step: 1493. Total energy = 1480.8403 kcal/mol (1477.3410 without restraints) Performing minimization step: 1494. Total energy = 1480.7228 kcal/mol (1477.2251 without restraints) Performing minimization step: 1495. Total energy = 1480.6055 kcal/mol (1477.1092 without restraints) Performing minimization step: 1496. Total energy = 1480.4883 kcal/mol (1476.9935 without restraints) Performing minimization step: 1497. Total energy = 1480.3715 kcal/mol (1476.8783 without restraints) Performing minimization step: 1498. Total energy = 1480.2544 kcal/mol (1476.7626 without restraints) Performing minimization step: 1499. Total energy = 1480.1374 kcal/mol (1476.6472 without restraints) Performing minimization step: 1500. Total energy = 1480.0205 kcal/mol (1476.5318 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/f42e8b68/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 1501. Total energy = 1479.9037 kcal/mol (1476.4166 without restraints) Performing minimization step: 1502. Total energy = 1479.7867 kcal/mol (1476.3011 without restraints) Performing minimization step: 1503. Total energy = 1479.6698 kcal/mol (1476.1857 without restraints) Performing minimization step: 1504. Total energy = 1479.5531 kcal/mol (1476.0705 without restraints) Performing minimization step: 1505. Total energy = 1479.4365 kcal/mol (1475.9555 without restraints) Performing minimization step: 1506. Total energy = 1479.3200 kcal/mol (1475.8404 without restraints) Performing minimization step: 1507. Total energy = 1479.2038 kcal/mol (1475.7259 without restraints) Performing minimization step: 1508. Total energy = 1479.0875 kcal/mol (1475.6110 without restraints) Performing minimization step: 1509. Total energy = 1478.9709 kcal/mol (1475.4959 without restraints) Performing minimization step: 1510. Total energy = 1478.8546 kcal/mol (1475.3811 without restraints) Performing minimization step: 1511. Total energy = 1478.7381 kcal/mol (1475.2660 without restraints) Performing minimization step: 1512. Total energy = 1478.6214 kcal/mol (1475.1508 without restraints) Performing minimization step: 1513. Total energy = 1478.5053 kcal/mol (1475.0362 without restraints) Performing minimization step: 1514. Total energy = 1478.3890 kcal/mol (1474.9214 without restraints) Performing minimization step: 1515. Total energy = 1478.2729 kcal/mol (1474.8068 without restraints) Performing minimization step: 1516. Total energy = 1478.1570 kcal/mol (1474.6924 without restraints) Performing minimization step: 1517. Total energy = 1478.0411 kcal/mol (1474.5780 without restraints) Performing minimization step: 1518. Total energy = 1477.9251 kcal/mol (1474.4635 without restraints) Performing minimization step: 1519. Total energy = 1477.8093 kcal/mol (1474.3492 without restraints) Performing minimization step: 1520. Total energy = 1477.6936 kcal/mol (1474.2349 without restraints) Performing minimization step: 1521. Total energy = 1477.5779 kcal/mol (1474.1207 without restraints) Performing minimization step: 1522. Total energy = 1477.4623 kcal/mol (1474.0066 without restraints) Performing minimization step: 1523. Total energy = 1477.3465 kcal/mol (1473.8923 without restraints) Performing minimization step: 1524. Total energy = 1477.2309 kcal/mol (1473.7780 without restraints) Performing minimization step: 1525. Total energy = 1477.1153 kcal/mol (1473.6640 without restraints) Performing minimization step: 1526. Total energy = 1476.9998 kcal/mol (1473.5500 without restraints) Performing minimization step: 1527. Total energy = 1476.8841 kcal/mol (1473.4358 without restraints) Performing minimization step: 1528. Total energy = 1476.7688 kcal/mol (1473.3220 without restraints) Performing minimization step: 1529. Total energy = 1476.6533 kcal/mol (1473.2079 without restraints) Performing minimization step: 1530. Total energy = 1476.5381 kcal/mol (1473.0942 without restraints) Performing minimization step: 1531. Total energy = 1476.4230 kcal/mol (1472.9805 without restraints) Performing minimization step: 1532. Total energy = 1476.3080 kcal/mol (1472.8670 without restraints) Performing minimization step: 1533. Total energy = 1476.1930 kcal/mol (1472.7534 without restraints) Performing minimization step: 1534. Total energy = 1476.0781 kcal/mol (1472.6400 without restraints) Performing minimization step: 1535. Total energy = 1475.9631 kcal/mol (1472.5265 without restraints) Performing minimization step: 1536. Total energy = 1475.8483 kcal/mol (1472.4131 without restraints) Performing minimization step: 1537. Total energy = 1475.7331 kcal/mol (1472.2993 without restraints) Performing minimization step: 1538. Total energy = 1475.6184 kcal/mol (1472.1861 without restraints) Performing minimization step: 1539. Total energy = 1475.5038 kcal/mol (1472.0730 without restraints) Performing minimization step: 1540. Total energy = 1475.3888 kcal/mol (1471.9594 without restraints) Performing minimization step: 1541. Total energy = 1475.2742 kcal/mol (1471.8463 without restraints) Performing minimization step: 1542. Total energy = 1475.1599 kcal/mol (1471.7334 without restraints) Performing minimization step: 1543. Total energy = 1475.0454 kcal/mol (1471.6204 without restraints) Performing minimization step: 1544. Total energy = 1474.9309 kcal/mol (1471.5073 without restraints) Performing minimization step: 1545. Total energy = 1474.8165 kcal/mol (1471.3944 without restraints) Performing minimization step: 1546. Total energy = 1474.7023 kcal/mol (1471.2815 without restraints) Performing minimization step: 1547. Total energy = 1474.5880 kcal/mol (1471.1687 without restraints) Performing minimization step: 1548. Total energy = 1474.4740 kcal/mol (1471.0564 without restraints) Performing minimization step: 1549. Total energy = 1474.3601 kcal/mol (1470.9437 without restraints) Performing minimization step: 1550. Total energy = 1474.2460 kcal/mol (1470.8310 without restraints) Performing minimization step: 1551. Total energy = 1474.1319 kcal/mol (1470.7183 without restraints) Performing minimization step: 1552. Total energy = 1474.0179 kcal/mol (1470.6058 without restraints) Performing minimization step: 1553. Total energy = 1473.9036 kcal/mol (1470.4929 without restraints) Performing minimization step: 1554. Total energy = 1473.7897 kcal/mol (1470.3805 without restraints) Performing minimization step: 1555. Total energy = 1473.6756 kcal/mol (1470.2676 without restraints) Performing minimization step: 1556. Total energy = 1473.5617 kcal/mol (1470.1552 without restraints) Performing minimization step: 1557. Total energy = 1473.4478 kcal/mol (1470.0427 without restraints) Performing minimization step: 1558. Total energy = 1473.3344 kcal/mol (1469.9309 without restraints) Performing minimization step: 1559. Total energy = 1473.2208 kcal/mol (1469.8187 without restraints) Performing minimization step: 1560. Total energy = 1473.1071 kcal/mol (1469.7062 without restraints) Performing minimization step: 1561. Total energy = 1472.9932 kcal/mol (1469.5939 without restraints) Performing minimization step: 1562. Total energy = 1472.8798 kcal/mol (1469.4818 without restraints) Performing minimization step: 1563. Total energy = 1472.7662 kcal/mol (1469.3696 without restraints) Performing minimization step: 1564. Total energy = 1472.6527 kcal/mol (1469.2576 without restraints) Performing minimization step: 1565. Total energy = 1472.5396 kcal/mol (1469.1459 without restraints) Performing minimization step: 1566. Total energy = 1472.4263 kcal/mol (1469.0340 without restraints) Performing minimization step: 1567. Total energy = 1472.3132 kcal/mol (1468.9224 without restraints) Performing minimization step: 1568. Total energy = 1472.1999 kcal/mol (1468.8104 without restraints) Performing minimization step: 1569. Total energy = 1472.0867 kcal/mol (1468.6987 without restraints) Performing minimization step: 1570. Total energy = 1471.9738 kcal/mol (1468.5872 without restraints) Performing minimization step: 1571. Total energy = 1471.8603 kcal/mol (1468.4749 without restraints) Performing minimization step: 1572. Total energy = 1471.7470 kcal/mol (1468.3631 without restraints) Performing minimization step: 1573. Total energy = 1471.6340 kcal/mol (1468.2515 without restraints) Performing minimization step: 1574. Total energy = 1471.5209 kcal/mol (1468.1398 without restraints) Performing minimization step: 1575. Total energy = 1471.4080 kcal/mol (1468.0283 without restraints) Performing minimization step: 1576. Total energy = 1471.2955 kcal/mol (1467.9172 without restraints) Performing minimization step: 1577. Total energy = 1471.1828 kcal/mol (1467.8059 without restraints) Performing minimization step: 1578. Total energy = 1471.0702 kcal/mol (1467.6947 without restraints) Performing minimization step: 1579. Total energy = 1470.9578 kcal/mol (1467.5837 without restraints) Performing minimization step: 1580. Total energy = 1470.8452 kcal/mol (1467.4725 without restraints) Performing minimization step: 1581. Total energy = 1470.7327 kcal/mol (1467.3613 without restraints) Performing minimization step: 1582. Total energy = 1470.6202 kcal/mol (1467.2502 without restraints) Performing minimization step: 1583. Total energy = 1470.5077 kcal/mol (1467.1391 without restraints) Performing minimization step: 1584. Total energy = 1470.3953 kcal/mol (1467.0280 without restraints) Performing minimization step: 1585. Total energy = 1470.2829 kcal/mol (1466.9171 without restraints) Performing minimization step: 1586. Total energy = 1470.1704 kcal/mol (1466.8059 without restraints) Performing minimization step: 1587. Total energy = 1470.0581 kcal/mol (1466.6950 without restraints) Performing minimization step: 1588. Total energy = 1469.9459 kcal/mol (1466.5842 without restraints) Performing minimization step: 1589. Total energy = 1469.8335 kcal/mol (1466.4731 without restraints) Performing minimization step: 1590. Total energy = 1469.7210 kcal/mol (1466.3620 without restraints) Performing minimization step: 1591. Total energy = 1469.6089 kcal/mol (1466.2513 without restraints) Performing minimization step: 1592. Total energy = 1469.4966 kcal/mol (1466.1402 without restraints) Performing minimization step: 1593. Total energy = 1469.3842 kcal/mol (1466.0293 without restraints) Performing minimization step: 1594. Total energy = 1469.2725 kcal/mol (1465.9190 without restraints) Performing minimization step: 1595. Total energy = 1469.1605 kcal/mol (1465.8083 without restraints) Performing minimization step: 1596. Total energy = 1469.0486 kcal/mol (1465.6978 without restraints) Performing minimization step: 1597. Total energy = 1468.9368 kcal/mol (1465.5874 without restraints) Performing minimization step: 1598. Total energy = 1468.8248 kcal/mol (1465.4767 without restraints) Performing minimization step: 1599. Total energy = 1468.7131 kcal/mol (1465.3664 without restraints) Performing minimization step: 1600. Total energy = 1468.6015 kcal/mol (1465.2562 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/f42e8b68/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 1601. Total energy = 1468.4896 kcal/mol (1465.1455 without restraints) Performing minimization step: 1602. Total energy = 1468.3777 kcal/mol (1465.0348 without restraints) Performing minimization step: 1603. Total energy = 1468.2659 kcal/mol (1464.9246 without restraints) Performing minimization step: 1604. Total energy = 1468.1542 kcal/mol (1464.8143 without restraints) Performing minimization step: 1605. Total energy = 1468.0428 kcal/mol (1464.7042 without restraints) Performing minimization step: 1606. Total energy = 1467.9313 kcal/mol (1464.5940 without restraints) Performing minimization step: 1607. Total energy = 1467.8200 kcal/mol (1464.4840 without restraints) Performing minimization step: 1608. Total energy = 1467.7087 kcal/mol (1464.3741 without restraints) Performing minimization step: 1609. Total energy = 1467.5980 kcal/mol (1464.2648 without restraints) Performing minimization step: 1610. Total energy = 1467.4869 kcal/mol (1464.1550 without restraints) Performing minimization step: 1611. Total energy = 1467.3757 kcal/mol (1464.0451 without restraints) Performing minimization step: 1612. Total energy = 1467.2648 kcal/mol (1463.9355 without restraints) Performing minimization step: 1613. Total energy = 1467.1537 kcal/mol (1463.8258 without restraints) Performing minimization step: 1614. Total energy = 1467.0427 kcal/mol (1463.7161 without restraints) Performing minimization step: 1615. Total energy = 1466.9317 kcal/mol (1463.6064 without restraints) Performing minimization step: 1616. Total energy = 1466.8206 kcal/mol (1463.4967 without restraints) Performing minimization step: 1617. Total energy = 1466.7097 kcal/mol (1463.3872 without restraints) Performing minimization step: 1618. Total energy = 1466.5988 kcal/mol (1463.2776 without restraints) Performing minimization step: 1619. Total energy = 1466.4880 kcal/mol (1463.1681 without restraints) Performing minimization step: 1620. Total energy = 1466.3772 kcal/mol (1463.0586 without restraints) Performing minimization step: 1621. Total energy = 1466.2662 kcal/mol (1462.9489 without restraints) Performing minimization step: 1622. Total energy = 1466.1556 kcal/mol (1462.8397 without restraints) Performing minimization step: 1623. Total energy = 1466.0452 kcal/mol (1462.7307 without restraints) Performing minimization step: 1624. Total energy = 1465.9348 kcal/mol (1462.6216 without restraints) Performing minimization step: 1625. Total energy = 1465.8243 kcal/mol (1462.5123 without restraints) Performing minimization step: 1626. Total energy = 1465.7137 kcal/mol (1462.4031 without restraints) Performing minimization step: 1627. Total energy = 1465.6033 kcal/mol (1462.2939 without restraints) Performing minimization step: 1628. Total energy = 1465.4924 kcal/mol (1462.1844 without restraints) Performing minimization step: 1629. Total energy = 1465.3820 kcal/mol (1462.0753 without restraints) Performing minimization step: 1630. Total energy = 1465.2717 kcal/mol (1461.9663 without restraints) Performing minimization step: 1631. Total energy = 1465.1614 kcal/mol (1461.8573 without restraints) Performing minimization step: 1632. Total energy = 1465.0511 kcal/mol (1461.7483 without restraints) Performing minimization step: 1633. Total energy = 1464.9409 kcal/mol (1461.6395 without restraints) Performing minimization step: 1634. Total energy = 1464.8307 kcal/mol (1461.5304 without restraints) Performing minimization step: 1635. Total energy = 1464.7202 kcal/mol (1461.4214 without restraints) Performing minimization step: 1636. Total energy = 1464.6101 kcal/mol (1461.3126 without restraints) Performing minimization step: 1637. Total energy = 1464.5001 kcal/mol (1461.2038 without restraints) Performing minimization step: 1638. Total energy = 1464.3905 kcal/mol (1461.0955 without restraints) Performing minimization step: 1639. Total energy = 1464.2805 kcal/mol (1460.9869 without restraints) Performing minimization step: 1640. Total energy = 1464.1707 kcal/mol (1460.8784 without restraints) Performing minimization step: 1641. Total energy = 1464.0608 kcal/mol (1460.7697 without restraints) Performing minimization step: 1642. Total energy = 1463.9510 kcal/mol (1460.6612 without restraints) Performing minimization step: 1643. Total energy = 1463.8411 kcal/mol (1460.5526 without restraints) Performing minimization step: 1644. Total energy = 1463.7313 kcal/mol (1460.4441 without restraints) Performing minimization step: 1645. Total energy = 1463.6218 kcal/mol (1460.3359 without restraints) Performing minimization step: 1646. Total energy = 1463.5119 kcal/mol (1460.2272 without restraints) Performing minimization step: 1647. Total energy = 1463.4021 kcal/mol (1460.1188 without restraints) Performing minimization step: 1648. Total energy = 1463.2926 kcal/mol (1460.0105 without restraints) Performing minimization step: 1649. Total energy = 1463.1829 kcal/mol (1459.9020 without restraints) Performing minimization step: 1650. Total energy = 1463.0733 kcal/mol (1459.7938 without restraints) Performing minimization step: 1651. Total energy = 1462.9638 kcal/mol (1459.6856 without restraints) Performing minimization step: 1652. Total energy = 1462.8543 kcal/mol (1459.5774 without restraints) Performing minimization step: 1653. Total energy = 1462.7446 kcal/mol (1459.4690 without restraints) Performing minimization step: 1654. Total energy = 1462.6353 kcal/mol (1459.3609 without restraints) Performing minimization step: 1655. Total energy = 1462.5258 kcal/mol (1459.2527 without restraints) Performing minimization step: 1656. Total energy = 1462.4163 kcal/mol (1459.1445 without restraints) Performing minimization step: 1657. Total energy = 1462.3070 kcal/mol (1459.0365 without restraints) Performing minimization step: 1658. Total energy = 1462.1978 kcal/mol (1458.9286 without restraints) Performing minimization step: 1659. Total energy = 1462.0889 kcal/mol (1458.8209 without restraints) Performing minimization step: 1660. Total energy = 1461.9799 kcal/mol (1458.7132 without restraints) Performing minimization step: 1661. Total energy = 1461.8706 kcal/mol (1458.6052 without restraints) Performing minimization step: 1662. Total energy = 1461.7614 kcal/mol (1458.4972 without restraints) Performing minimization step: 1663. Total energy = 1461.6523 kcal/mol (1458.3895 without restraints) Performing minimization step: 1664. Total energy = 1461.5433 kcal/mol (1458.2817 without restraints) Performing minimization step: 1665. Total energy = 1461.4343 kcal/mol (1458.1740 without restraints) Performing minimization step: 1666. Total energy = 1461.3254 kcal/mol (1458.0663 without restraints) Performing minimization step: 1667. Total energy = 1461.2166 kcal/mol (1457.9587 without restraints) Performing minimization step: 1668. Total energy = 1461.1079 kcal/mol (1457.8514 without restraints) Performing minimization step: 1669. Total energy = 1460.9991 kcal/mol (1457.7438 without restraints) Performing minimization step: 1670. Total energy = 1460.8903 kcal/mol (1457.6363 without restraints) Performing minimization step: 1671. Total energy = 1460.7816 kcal/mol (1457.5288 without restraints) Performing minimization step: 1672. Total energy = 1460.6730 kcal/mol (1457.4214 without restraints) Performing minimization step: 1673. Total energy = 1460.5643 kcal/mol (1457.3140 without restraints) Performing minimization step: 1674. Total energy = 1460.4557 kcal/mol (1457.2066 without restraints) Performing minimization step: 1675. Total energy = 1460.3473 kcal/mol (1457.0995 without restraints) Performing minimization step: 1676. Total energy = 1460.2390 kcal/mol (1456.9925 without restraints) Performing minimization step: 1677. Total energy = 1460.1305 kcal/mol (1456.8852 without restraints) Performing minimization step: 1678. Total energy = 1460.0222 kcal/mol (1456.7782 without restraints) Performing minimization step: 1679. Total energy = 1459.9137 kcal/mol (1456.6708 without restraints) Performing minimization step: 1680. Total energy = 1459.8050 kcal/mol (1456.5635 without restraints) Performing minimization step: 1681. Total energy = 1459.6964 kcal/mol (1456.4561 without restraints) Performing minimization step: 1682. Total energy = 1459.5878 kcal/mol (1456.3487 without restraints) Performing minimization step: 1683. Total energy = 1459.4799 kcal/mol (1456.2421 without restraints) Performing minimization step: 1684. Total energy = 1459.3715 kcal/mol (1456.1349 without restraints) Performing minimization step: 1685. Total energy = 1459.2632 kcal/mol (1456.0279 without restraints) Performing minimization step: 1686. Total energy = 1459.1552 kcal/mol (1455.9213 without restraints) Performing minimization step: 1687. Total energy = 1459.0473 kcal/mol (1455.8144 without restraints) Performing minimization step: 1688. Total energy = 1458.9393 kcal/mol (1455.7076 without restraints) Performing minimization step: 1689. Total energy = 1458.8312 kcal/mol (1455.6008 without restraints) Performing minimization step: 1690. Total energy = 1458.7232 kcal/mol (1455.4939 without restraints) Performing minimization step: 1691. Total energy = 1458.6149 kcal/mol (1455.3870 without restraints) Performing minimization step: 1692. Total energy = 1458.5068 kcal/mol (1455.2801 without restraints) Performing minimization step: 1693. Total energy = 1458.3989 kcal/mol (1455.1734 without restraints) Performing minimization step: 1694. Total energy = 1458.2910 kcal/mol (1455.0668 without restraints) Performing minimization step: 1695. Total energy = 1458.1830 kcal/mol (1454.9600 without restraints) Performing minimization step: 1696. Total energy = 1458.0750 kcal/mol (1454.8532 without restraints) Performing minimization step: 1697. Total energy = 1457.9671 kcal/mol (1454.7465 without restraints) Performing minimization step: 1698. Total energy = 1457.8594 kcal/mol (1454.6400 without restraints) Performing minimization step: 1699. Total energy = 1457.7513 kcal/mol (1454.5331 without restraints) Performing minimization step: 1700. Total energy = 1457.6436 kcal/mol (1454.4267 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/f42e8b68/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 1701. Total energy = 1457.5360 kcal/mol (1454.3203 without restraints) Performing minimization step: 1702. Total energy = 1457.4283 kcal/mol (1454.2137 without restraints) Performing minimization step: 1703. Total energy = 1457.3206 kcal/mol (1454.1073 without restraints) Performing minimization step: 1704. Total energy = 1457.2130 kcal/mol (1454.0008 without restraints) Performing minimization step: 1705. Total energy = 1457.1054 kcal/mol (1453.8945 without restraints) Performing minimization step: 1706. Total energy = 1456.9980 kcal/mol (1453.7883 without restraints) Performing minimization step: 1707. Total energy = 1456.8909 kcal/mol (1453.6824 without restraints) Performing minimization step: 1708. Total energy = 1456.7835 kcal/mol (1453.5763 without restraints) Performing minimization step: 1709. Total energy = 1456.6762 kcal/mol (1453.4701 without restraints) Performing minimization step: 1710. Total energy = 1456.5689 kcal/mol (1453.3640 without restraints) Performing minimization step: 1711. Total energy = 1456.4616 kcal/mol (1453.2580 without restraints) Performing minimization step: 1712. Total energy = 1456.3543 kcal/mol (1453.1519 without restraints) Performing minimization step: 1713. Total energy = 1456.2471 kcal/mol (1453.0459 without restraints) Performing minimization step: 1714. Total energy = 1456.1399 kcal/mol (1452.9399 without restraints) Performing minimization step: 1715. Total energy = 1456.0328 kcal/mol (1452.8339 without restraints) Performing minimization step: 1716. Total energy = 1455.9256 kcal/mol (1452.7280 without restraints) Performing minimization step: 1717. Total energy = 1455.8185 kcal/mol (1452.6220 without restraints) Performing minimization step: 1718. Total energy = 1455.7114 kcal/mol (1452.5161 without restraints) Performing minimization step: 1719. Total energy = 1455.6041 kcal/mol (1452.4101 without restraints) Performing minimization step: 1720. Total energy = 1455.4972 kcal/mol (1452.3043 without restraints) Performing minimization step: 1721. Total energy = 1455.3897 kcal/mol (1452.1980 without restraints) Performing minimization step: 1722. Total energy = 1455.2828 kcal/mol (1452.0923 without restraints) Performing minimization step: 1723. Total energy = 1455.1761 kcal/mol (1451.9869 without restraints) Performing minimization step: 1724. Total energy = 1455.0693 kcal/mol (1451.8812 without restraints) Performing minimization step: 1725. Total energy = 1454.9624 kcal/mol (1451.7757 without restraints) Performing minimization step: 1726. Total energy = 1454.8558 kcal/mol (1451.6701 without restraints) Performing minimization step: 1727. Total energy = 1454.7491 kcal/mol (1451.5646 without restraints) Performing minimization step: 1728. Total energy = 1454.6424 kcal/mol (1451.4591 without restraints) Performing minimization step: 1729. Total energy = 1454.5358 kcal/mol (1451.3536 without restraints) Performing minimization step: 1730. Total energy = 1454.4291 kcal/mol (1451.2481 without restraints) Performing minimization step: 1731. Total energy = 1454.3225 kcal/mol (1451.1427 without restraints) Performing minimization step: 1732. Total energy = 1454.2160 kcal/mol (1451.0373 without restraints) Performing minimization step: 1733. Total energy = 1454.1092 kcal/mol (1450.9318 without restraints) Performing minimization step: 1734. Total energy = 1454.0028 kcal/mol (1450.8265 without restraints) Performing minimization step: 1735. Total energy = 1453.8963 kcal/mol (1450.7212 without restraints) Performing minimization step: 1736. Total energy = 1453.7899 kcal/mol (1450.6160 without restraints) Performing minimization step: 1737. Total energy = 1453.6835 kcal/mol (1450.5108 without restraints) Performing minimization step: 1738. Total energy = 1453.5772 kcal/mol (1450.4056 without restraints) Performing minimization step: 1739. Total energy = 1453.4708 kcal/mol (1450.3004 without restraints) Performing minimization step: 1740. Total energy = 1453.3643 kcal/mol (1450.1951 without restraints) Performing minimization step: 1741. Total energy = 1453.2580 kcal/mol (1450.0900 without restraints) Performing minimization step: 1742. Total energy = 1453.1518 kcal/mol (1449.9849 without restraints) Performing minimization step: 1743. Total energy = 1453.0456 kcal/mol (1449.8798 without restraints) Performing minimization step: 1744. Total energy = 1452.9393 kcal/mol (1449.7746 without restraints) Performing minimization step: 1745. Total energy = 1452.8328 kcal/mol (1449.6692 without restraints) Performing minimization step: 1746. Total energy = 1452.7264 kcal/mol (1449.5641 without restraints) Performing minimization step: 1747. Total energy = 1452.6201 kcal/mol (1449.4590 without restraints) Performing minimization step: 1748. Total energy = 1452.5137 kcal/mol (1449.3538 without restraints) Performing minimization step: 1749. Total energy = 1452.4077 kcal/mol (1449.2490 without restraints) Performing minimization step: 1750. Total energy = 1452.3018 kcal/mol (1449.1443 without restraints) Performing minimization step: 1751. Total energy = 1452.1958 kcal/mol (1449.0395 without restraints) Performing minimization step: 1752. Total energy = 1452.0900 kcal/mol (1448.9348 without restraints) Performing minimization step: 1753. Total energy = 1451.9844 kcal/mol (1448.8303 without restraints) Performing minimization step: 1754. Total energy = 1451.8786 kcal/mol (1448.7256 without restraints) Performing minimization step: 1755. Total energy = 1451.7728 kcal/mol (1448.6210 without restraints) Performing minimization step: 1756. Total energy = 1451.6669 kcal/mol (1448.5163 without restraints) Performing minimization step: 1757. Total energy = 1451.5609 kcal/mol (1448.4114 without restraints) Performing minimization step: 1758. Total energy = 1451.4555 kcal/mol (1448.3072 without restraints) Performing minimization step: 1759. Total energy = 1451.3496 kcal/mol (1448.2024 without restraints) Performing minimization step: 1760. Total energy = 1451.2439 kcal/mol (1448.0978 without restraints) Performing minimization step: 1761. Total energy = 1451.1384 kcal/mol (1447.9935 without restraints) Performing minimization step: 1762. Total energy = 1451.0324 kcal/mol (1447.8886 without restraints) Performing minimization step: 1763. Total energy = 1450.9268 kcal/mol (1447.7842 without restraints) Performing minimization step: 1764. Total energy = 1450.8210 kcal/mol (1447.6795 without restraints) Performing minimization step: 1765. Total energy = 1450.7155 kcal/mol (1447.5751 without restraints) Performing minimization step: 1766. Total energy = 1450.6102 kcal/mol (1447.4709 without restraints) Performing minimization step: 1767. Total energy = 1450.5049 kcal/mol (1447.3668 without restraints) Performing minimization step: 1768. Total energy = 1450.3992 kcal/mol (1447.2622 without restraints) Performing minimization step: 1769. Total energy = 1450.2938 kcal/mol (1447.1580 without restraints) Performing minimization step: 1770. Total energy = 1450.1884 kcal/mol (1447.0536 without restraints) Performing minimization step: 1771. Total energy = 1450.0829 kcal/mol (1446.9494 without restraints) Performing minimization step: 1772. Total energy = 1449.9776 kcal/mol (1446.8452 without restraints) Performing minimization step: 1773. Total energy = 1449.8723 kcal/mol (1446.7410 without restraints) Performing minimization step: 1774. Total energy = 1449.7672 kcal/mol (1446.6370 without restraints) Performing minimization step: 1775. Total energy = 1449.6620 kcal/mol (1446.5329 without restraints) Performing minimization step: 1776. Total energy = 1449.5567 kcal/mol (1446.4288 without restraints) Performing minimization step: 1777. Total energy = 1449.4515 kcal/mol (1446.3247 without restraints) Performing minimization step: 1778. Total energy = 1449.3465 kcal/mol (1446.2209 without restraints) Performing minimization step: 1779. Total energy = 1449.2416 kcal/mol (1446.1171 without restraints) Performing minimization step: 1780. Total energy = 1449.1360 kcal/mol (1446.0126 without restraints) Performing minimization step: 1781. Total energy = 1449.0310 kcal/mol (1445.9088 without restraints) Performing minimization step: 1782. Total energy = 1448.9260 kcal/mol (1445.8049 without restraints) Performing minimization step: 1783. Total energy = 1448.8210 kcal/mol (1445.7009 without restraints) Performing minimization step: 1784. Total energy = 1448.7160 kcal/mol (1445.5971 without restraints) Performing minimization step: 1785. Total energy = 1448.6110 kcal/mol (1445.4932 without restraints) Performing minimization step: 1786. Total energy = 1448.5059 kcal/mol (1445.3892 without restraints) Performing minimization step: 1787. Total energy = 1448.4010 kcal/mol (1445.2854 without restraints) Performing minimization step: 1788. Total energy = 1448.2966 kcal/mol (1445.1822 without restraints) Performing minimization step: 1789. Total energy = 1448.1920 kcal/mol (1445.0787 without restraints) Performing minimization step: 1790. Total energy = 1448.0872 kcal/mol (1444.9750 without restraints) Performing minimization step: 1791. Total energy = 1447.9823 kcal/mol (1444.8711 without restraints) Performing minimization step: 1792. Total energy = 1447.8774 kcal/mol (1444.7674 without restraints) Performing minimization step: 1793. Total energy = 1447.7727 kcal/mol (1444.6638 without restraints) Performing minimization step: 1794. Total energy = 1447.6680 kcal/mol (1444.5603 without restraints) Performing minimization step: 1795. Total energy = 1447.5635 kcal/mol (1444.4569 without restraints) Performing minimization step: 1796. Total energy = 1447.4588 kcal/mol (1444.3532 without restraints) Performing minimization step: 1797. Total energy = 1447.3542 kcal/mol (1444.2497 without restraints) Performing minimization step: 1798. Total energy = 1447.2495 kcal/mol (1444.1461 without restraints) Performing minimization step: 1799. Total energy = 1447.1449 kcal/mol (1444.0426 without restraints) Performing minimization step: 1800. Total energy = 1447.0403 kcal/mol (1443.9392 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/f42e8b68/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 1801. Total energy = 1446.9358 kcal/mol (1443.8357 without restraints) Performing minimization step: 1802. Total energy = 1446.8317 kcal/mol (1443.7327 without restraints) Performing minimization step: 1803. Total energy = 1446.7272 kcal/mol (1443.6294 without restraints) Performing minimization step: 1804. Total energy = 1446.6226 kcal/mol (1443.5259 without restraints) Performing minimization step: 1805. Total energy = 1446.5180 kcal/mol (1443.4224 without restraints) Performing minimization step: 1806. Total energy = 1446.4133 kcal/mol (1443.3188 without restraints) Performing minimization step: 1807. Total energy = 1446.3090 kcal/mol (1443.2155 without restraints) Performing minimization step: 1808. Total energy = 1446.2048 kcal/mol (1443.1124 without restraints) Performing minimization step: 1809. Total energy = 1446.1007 kcal/mol (1443.0094 without restraints) Performing minimization step: 1810. Total energy = 1445.9964 kcal/mol (1442.9063 without restraints) Performing minimization step: 1811. Total energy = 1445.8922 kcal/mol (1442.8031 without restraints) Performing minimization step: 1812. Total energy = 1445.7880 kcal/mol (1442.7000 without restraints) Performing minimization step: 1813. Total energy = 1445.6841 kcal/mol (1442.5972 without restraints) Performing minimization step: 1814. Total energy = 1445.5801 kcal/mol (1442.4941 without restraints) Performing minimization step: 1815. Total energy = 1445.4759 kcal/mol (1442.3911 without restraints) Performing minimization step: 1816. Total energy = 1445.3717 kcal/mol (1442.2881 without restraints) Performing minimization step: 1817. Total energy = 1445.2680 kcal/mol (1442.1854 without restraints) Performing minimization step: 1818. Total energy = 1445.1636 kcal/mol (1442.0818 without restraints) Performing minimization step: 1819. Total energy = 1445.0590 kcal/mol (1441.9786 without restraints) Performing minimization step: 1820. Total energy = 1444.9551 kcal/mol (1441.8757 without restraints) Performing minimization step: 1821. Total energy = 1444.8511 kcal/mol (1441.7729 without restraints) Performing minimization step: 1822. Total energy = 1444.7472 kcal/mol (1441.6700 without restraints) Performing minimization step: 1823. Total energy = 1444.6435 kcal/mol (1441.5674 without restraints) Performing minimization step: 1824. Total energy = 1444.5396 kcal/mol (1441.4646 without restraints) Performing minimization step: 1825. Total energy = 1444.4359 kcal/mol (1441.3620 without restraints) Performing minimization step: 1826. Total energy = 1444.3322 kcal/mol (1441.2593 without restraints) Performing minimization step: 1827. Total energy = 1444.2286 kcal/mol (1441.1568 without restraints) Performing minimization step: 1828. Total energy = 1444.1249 kcal/mol (1441.0541 without restraints) Performing minimization step: 1829. Total energy = 1444.0211 kcal/mol (1440.9515 without restraints) Performing minimization step: 1830. Total energy = 1443.9174 kcal/mol (1440.8488 without restraints) Performing minimization step: 1831. Total energy = 1443.8138 kcal/mol (1440.7463 without restraints) Performing minimization step: 1832. Total energy = 1443.7100 kcal/mol (1440.6434 without restraints) Performing minimization step: 1833. Total energy = 1443.6063 kcal/mol (1440.5409 without restraints) Performing minimization step: 1834. Total energy = 1443.5029 kcal/mol (1440.4386 without restraints) Performing minimization step: 1835. Total energy = 1443.3994 kcal/mol (1440.3361 without restraints) Performing minimization step: 1836. Total energy = 1443.2955 kcal/mol (1440.2333 without restraints) Performing minimization step: 1837. Total energy = 1443.1922 kcal/mol (1440.1311 without restraints) Performing minimization step: 1838. Total energy = 1443.0887 kcal/mol (1440.0287 without restraints) Performing minimization step: 1839. Total energy = 1442.9853 kcal/mol (1439.9262 without restraints) Performing minimization step: 1840. Total energy = 1442.8820 kcal/mol (1439.8243 without restraints) Performing minimization step: 1841. Total energy = 1442.7788 kcal/mol (1439.7219 without restraints) Performing minimization step: 1842. Total energy = 1442.6754 kcal/mol (1439.6196 without restraints) Performing minimization step: 1843. Total energy = 1442.5718 kcal/mol (1439.5171 without restraints) Performing minimization step: 1844. Total energy = 1442.4686 kcal/mol (1439.4149 without restraints) Performing minimization step: 1845. Total energy = 1442.3653 kcal/mol (1439.3127 without restraints) Performing minimization step: 1846. Total energy = 1442.2617 kcal/mol (1439.2100 without restraints) Performing minimization step: 1847. Total energy = 1442.1584 kcal/mol (1439.1078 without restraints) Performing minimization step: 1848. Total energy = 1442.0551 kcal/mol (1439.0056 without restraints) Performing minimization step: 1849. Total energy = 1441.9519 kcal/mol (1438.9035 without restraints) Performing minimization step: 1850. Total energy = 1441.8487 kcal/mol (1438.8013 without restraints) Performing minimization step: 1851. Total energy = 1441.7455 kcal/mol (1438.6992 without restraints) Performing minimization step: 1852. Total energy = 1441.6424 kcal/mol (1438.5971 without restraints) Performing minimization step: 1853. Total energy = 1441.5394 kcal/mol (1438.4951 without restraints) Performing minimization step: 1854. Total energy = 1441.4363 kcal/mol (1438.3931 without restraints) Performing minimization step: 1855. Total energy = 1441.3331 kcal/mol (1438.2909 without restraints) Performing minimization step: 1856. Total energy = 1441.2300 kcal/mol (1438.1889 without restraints) Performing minimization step: 1857. Total energy = 1441.1271 kcal/mol (1438.0870 without restraints) Performing minimization step: 1858. Total energy = 1441.0241 kcal/mol (1437.9851 without restraints) Performing minimization step: 1859. Total energy = 1440.9211 kcal/mol (1437.8830 without restraints) Performing minimization step: 1860. Total energy = 1440.8177 kcal/mol (1437.7808 without restraints) Performing minimization step: 1861. Total energy = 1440.7149 kcal/mol (1437.6790 without restraints) Performing minimization step: 1862. Total energy = 1440.6120 kcal/mol (1437.5772 without restraints) Performing minimization step: 1863. Total energy = 1440.5092 kcal/mol (1437.4754 without restraints) Performing minimization step: 1864. Total energy = 1440.4064 kcal/mol (1437.3736 without restraints) Performing minimization step: 1865. Total energy = 1440.3035 kcal/mol (1437.2718 without restraints) Performing minimization step: 1866. Total energy = 1440.2009 kcal/mol (1437.1701 without restraints) Performing minimization step: 1867. Total energy = 1440.0978 kcal/mol (1437.0681 without restraints) Performing minimization step: 1868. Total energy = 1439.9950 kcal/mol (1436.9665 without restraints) Performing minimization step: 1869. Total energy = 1439.8924 kcal/mol (1436.8649 without restraints) Performing minimization step: 1870. Total energy = 1439.7899 kcal/mol (1436.7633 without restraints) Performing minimization step: 1871. Total energy = 1439.6873 kcal/mol (1436.6617 without restraints) Performing minimization step: 1872. Total energy = 1439.5842 kcal/mol (1436.5596 without restraints) Performing minimization step: 1873. Total energy = 1439.4816 kcal/mol (1436.4580 without restraints) Performing minimization step: 1874. Total energy = 1439.3788 kcal/mol (1436.3563 without restraints) Performing minimization step: 1875. Total energy = 1439.2764 kcal/mol (1436.2549 without restraints) Performing minimization step: 1876. Total energy = 1439.1741 kcal/mol (1436.1537 without restraints) Performing minimization step: 1877. Total energy = 1439.0717 kcal/mol (1436.0522 without restraints) Performing minimization step: 1878. Total energy = 1438.9690 kcal/mol (1435.9506 without restraints) Performing minimization step: 1879. Total energy = 1438.8665 kcal/mol (1435.8492 without restraints) Performing minimization step: 1880. Total energy = 1438.7641 kcal/mol (1435.7478 without restraints) Performing minimization step: 1881. Total energy = 1438.6618 kcal/mol (1435.6465 without restraints) Performing minimization step: 1882. Total energy = 1438.5595 kcal/mol (1435.5452 without restraints) Performing minimization step: 1883. Total energy = 1438.4570 kcal/mol (1435.4437 without restraints) Performing minimization step: 1884. Total energy = 1438.3547 kcal/mol (1435.3425 without restraints) Performing minimization step: 1885. Total energy = 1438.2524 kcal/mol (1435.2412 without restraints) Performing minimization step: 1886. Total energy = 1438.1502 kcal/mol (1435.1399 without restraints) Performing minimization step: 1887. Total energy = 1438.0480 kcal/mol (1435.0388 without restraints) Performing minimization step: 1888. Total energy = 1437.9458 kcal/mol (1434.9376 without restraints) Performing minimization step: 1889. Total energy = 1437.8435 kcal/mol (1434.8363 without restraints) Performing minimization step: 1890. Total energy = 1437.7414 kcal/mol (1434.7353 without restraints) Performing minimization step: 1891. Total energy = 1437.6394 kcal/mol (1434.6342 without restraints) Performing minimization step: 1892. Total energy = 1437.5374 kcal/mol (1434.5333 without restraints) Performing minimization step: 1893. Total energy = 1437.4357 kcal/mol (1434.4325 without restraints) Performing minimization step: 1894. Total energy = 1437.3337 kcal/mol (1434.3315 without restraints) Performing minimization step: 1895. Total energy = 1437.2318 kcal/mol (1434.2306 without restraints) Performing minimization step: 1896. Total energy = 1437.1296 kcal/mol (1434.1295 without restraints) Performing minimization step: 1897. Total energy = 1437.0277 kcal/mol (1434.0285 without restraints) Performing minimization step: 1898. Total energy = 1436.9257 kcal/mol (1433.9276 without restraints) Performing minimization step: 1899. Total energy = 1436.8239 kcal/mol (1433.8268 without restraints) Performing minimization step: 1900. Total energy = 1436.7220 kcal/mol (1433.7259 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/f42e8b68/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 1901. Total energy = 1436.6202 kcal/mol (1433.6251 without restraints) Performing minimization step: 1902. Total energy = 1436.5184 kcal/mol (1433.5243 without restraints) Performing minimization step: 1903. Total energy = 1436.4166 kcal/mol (1433.4235 without restraints) Performing minimization step: 1904. Total energy = 1436.3147 kcal/mol (1433.3225 without restraints) Performing minimization step: 1905. Total energy = 1436.2124 kcal/mol (1433.2212 without restraints) Performing minimization step: 1906. Total energy = 1436.1109 kcal/mol (1433.1209 without restraints) Performing minimization step: 1907. Total energy = 1436.0087 kcal/mol (1433.0194 without restraints) Performing minimization step: 1908. Total energy = 1435.9068 kcal/mol (1432.9187 without restraints) Performing minimization step: 1909. Total energy = 1435.8052 kcal/mol (1432.8181 without restraints) Performing minimization step: 1910. Total energy = 1435.7036 kcal/mol (1432.7174 without restraints) Performing minimization step: 1911. Total energy = 1435.6020 kcal/mol (1432.6168 without restraints) Performing minimization step: 1912. Total energy = 1435.5005 kcal/mol (1432.5163 without restraints) Performing minimization step: 1913. Total energy = 1435.3990 kcal/mol (1432.4158 without restraints) Performing minimization step: 1914. Total energy = 1435.2975 kcal/mol (1432.3153 without restraints) Performing minimization step: 1915. Total energy = 1435.1955 kcal/mol (1432.2142 without restraints) Performing minimization step: 1916. Total energy = 1435.0939 kcal/mol (1432.1137 without restraints) Performing minimization step: 1917. Total energy = 1434.9924 kcal/mol (1432.0132 without restraints) Performing minimization step: 1918. Total energy = 1434.8906 kcal/mol (1431.9124 without restraints) Performing minimization step: 1919. Total energy = 1434.7890 kcal/mol (1431.8118 without restraints) Performing minimization step: 1920. Total energy = 1434.6879 kcal/mol (1431.7118 without restraints) Performing minimization step: 1921. Total energy = 1434.5867 kcal/mol (1431.6115 without restraints) Performing minimization step: 1922. Total energy = 1434.4855 kcal/mol (1431.5112 without restraints) Performing minimization step: 1923. Total energy = 1434.3842 kcal/mol (1431.4109 without restraints) Performing minimization step: 1924. Total energy = 1434.2829 kcal/mol (1431.3106 without restraints) Performing minimization step: 1925. Total energy = 1434.1818 kcal/mol (1431.2103 without restraints) Performing minimization step: 1926. Total energy = 1434.0805 kcal/mol (1431.1101 without restraints) Performing minimization step: 1927. Total energy = 1433.9793 kcal/mol (1431.0099 without restraints) Performing minimization step: 1928. Total energy = 1433.8778 kcal/mol (1430.9094 without restraints) Performing minimization step: 1929. Total energy = 1433.7767 kcal/mol (1430.8093 without restraints) Performing minimization step: 1930. Total energy = 1433.6756 kcal/mol (1430.7091 without restraints) Performing minimization step: 1931. Total energy = 1433.5746 kcal/mol (1430.6091 without restraints) Performing minimization step: 1932. Total energy = 1433.4735 kcal/mol (1430.5090 without restraints) Performing minimization step: 1933. Total energy = 1433.3725 kcal/mol (1430.4090 without restraints) Performing minimization step: 1934. Total energy = 1433.2713 kcal/mol (1430.3087 without restraints) Performing minimization step: 1935. Total energy = 1433.1703 kcal/mol (1430.2085 without restraints) Performing minimization step: 1936. Total energy = 1433.0692 kcal/mol (1430.1086 without restraints) Performing minimization step: 1937. Total energy = 1432.9683 kcal/mol (1430.0086 without restraints) Performing minimization step: 1938. Total energy = 1432.8674 kcal/mol (1429.9087 without restraints) Performing minimization step: 1939. Total energy = 1432.7666 kcal/mol (1429.8089 without restraints) Performing minimization step: 1940. Total energy = 1432.6658 kcal/mol (1429.7090 without restraints) Performing minimization step: 1941. Total energy = 1432.5649 kcal/mol (1429.6091 without restraints) Performing minimization step: 1942. Total energy = 1432.4642 kcal/mol (1429.5093 without restraints) Performing minimization step: 1943. Total energy = 1432.3634 kcal/mol (1429.4096 without restraints) Performing minimization step: 1944. Total energy = 1432.2627 kcal/mol (1429.3098 without restraints) Performing minimization step: 1945. Total energy = 1432.1620 kcal/mol (1429.2101 without restraints) Performing minimization step: 1946. Total energy = 1432.0613 kcal/mol (1429.1103 without restraints) Performing minimization step: 1947. Total energy = 1431.9607 kcal/mol (1429.0107 without restraints) Performing minimization step: 1948. Total energy = 1431.8600 kcal/mol (1428.9110 without restraints) Performing minimization step: 1949. Total energy = 1431.7594 kcal/mol (1428.8113 without restraints) Performing minimization step: 1950. Total energy = 1431.6587 kcal/mol (1428.7115 without restraints) Performing minimization step: 1951. Total energy = 1431.5581 kcal/mol (1428.6119 without restraints) Performing minimization step: 1952. Total energy = 1431.4575 kcal/mol (1428.5122 without restraints) Performing minimization step: 1953. Total energy = 1431.3569 kcal/mol (1428.4126 without restraints) Performing minimization step: 1954. Total energy = 1431.2564 kcal/mol (1428.3131 without restraints) Performing minimization step: 1955. Total energy = 1431.1560 kcal/mol (1428.2136 without restraints) Performing minimization step: 1956. Total energy = 1431.0555 kcal/mol (1428.1141 without restraints) Performing minimization step: 1957. Total energy = 1430.9551 kcal/mol (1428.0147 without restraints) Performing minimization step: 1958. Total energy = 1430.8548 kcal/mol (1427.9153 without restraints) Performing minimization step: 1959. Total energy = 1430.7543 kcal/mol (1427.8157 without restraints) Performing minimization step: 1960. Total energy = 1430.6538 kcal/mol (1427.7162 without restraints) Performing minimization step: 1961. Total energy = 1430.5537 kcal/mol (1427.6171 without restraints) Performing minimization step: 1962. Total energy = 1430.4535 kcal/mol (1427.5178 without restraints) Performing minimization step: 1963. Total energy = 1430.3532 kcal/mol (1427.4184 without restraints) Performing minimization step: 1964. Total energy = 1430.2528 kcal/mol (1427.3190 without restraints) Performing minimization step: 1965. Total energy = 1430.1522 kcal/mol (1427.2194 without restraints) Performing minimization step: 1966. Total energy = 1430.0521 kcal/mol (1427.1201 without restraints) Performing minimization step: 1967. Total energy = 1429.9519 kcal/mol (1427.0209 without restraints) Performing minimization step: 1968. Total energy = 1429.8514 kcal/mol (1426.9213 without restraints) Performing minimization step: 1969. Total energy = 1429.7513 kcal/mol (1426.8222 without restraints) Performing minimization step: 1970. Total energy = 1429.6512 kcal/mol (1426.7231 without restraints) Performing minimization step: 1971. Total energy = 1429.5511 kcal/mol (1426.6239 without restraints) Performing minimization step: 1972. Total energy = 1429.4511 kcal/mol (1426.5249 without restraints) Performing minimization step: 1973. Total energy = 1429.3511 kcal/mol (1426.4258 without restraints) Performing minimization step: 1974. Total energy = 1429.2512 kcal/mol (1426.3268 without restraints) Performing minimization step: 1975. Total energy = 1429.1513 kcal/mol (1426.2278 without restraints) Performing minimization step: 1976. Total energy = 1429.0512 kcal/mol (1426.1286 without restraints) Performing minimization step: 1977. Total energy = 1428.9511 kcal/mol (1426.0295 without restraints) Performing minimization step: 1978. Total energy = 1428.8512 kcal/mol (1425.9305 without restraints) Performing minimization step: 1979. Total energy = 1428.7513 kcal/mol (1425.8316 without restraints) Performing minimization step: 1980. Total energy = 1428.6517 kcal/mol (1425.7328 without restraints) Performing minimization step: 1981. Total energy = 1428.5518 kcal/mol (1425.6340 without restraints) Performing minimization step: 1982. Total energy = 1428.4521 kcal/mol (1425.5352 without restraints) Performing minimization step: 1983. Total energy = 1428.3523 kcal/mol (1425.4363 without restraints) Performing minimization step: 1984. Total energy = 1428.2526 kcal/mol (1425.3376 without restraints) Performing minimization step: 1985. Total energy = 1428.1529 kcal/mol (1425.2388 without restraints) Performing minimization step: 1986. Total energy = 1428.0532 kcal/mol (1425.1400 without restraints) Performing minimization step: 1987. Total energy = 1427.9536 kcal/mol (1425.0414 without restraints) Performing minimization step: 1988. Total energy = 1427.8540 kcal/mol (1424.9427 without restraints) Performing minimization step: 1989. Total energy = 1427.7545 kcal/mol (1424.8441 without restraints) Performing minimization step: 1990. Total energy = 1427.6550 kcal/mol (1424.7455 without restraints) Performing minimization step: 1991. Total energy = 1427.5554 kcal/mol (1424.6469 without restraints) Performing minimization step: 1992. Total energy = 1427.4560 kcal/mol (1424.5484 without restraints) Performing minimization step: 1993. Total energy = 1427.3566 kcal/mol (1424.4498 without restraints) Performing minimization step: 1994. Total energy = 1427.2573 kcal/mol (1424.3515 without restraints) Performing minimization step: 1995. Total energy = 1427.1577 kcal/mol (1424.2528 without restraints) Performing minimization step: 1996. Total energy = 1427.0583 kcal/mol (1424.1544 without restraints) Performing minimization step: 1997. Total energy = 1426.9591 kcal/mol (1424.0560 without restraints) Performing minimization step: 1998. Total energy = 1426.8597 kcal/mol (1423.9576 without restraints) Performing minimization step: 1999. Total energy = 1426.7604 kcal/mol (1423.8592 without restraints) Performing minimization step: 2000. Total energy = 1426.6612 kcal/mol (1423.7611 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/f42e8b68/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 2001. Total energy = 1426.5620 kcal/mol (1423.6627 without restraints) Performing minimization step: 2002. Total energy = 1426.4626 kcal/mol (1423.5641 without restraints) Performing minimization step: 2003. Total energy = 1426.3633 kcal/mol (1423.4656 without restraints) Performing minimization step: 2004. Total energy = 1426.2640 kcal/mol (1423.3674 without restraints) Performing minimization step: 2005. Total energy = 1426.1649 kcal/mol (1423.2692 without restraints) Performing minimization step: 2006. Total energy = 1426.0658 kcal/mol (1423.1710 without restraints) Performing minimization step: 2007. Total energy = 1425.9665 kcal/mol (1423.0727 without restraints) Performing minimization step: 2008. Total energy = 1425.8675 kcal/mol (1422.9746 without restraints) Performing minimization step: 2009. Total energy = 1425.7685 kcal/mol (1422.8765 without restraints) Performing minimization step: 2010. Total energy = 1425.6695 kcal/mol (1422.7784 without restraints) Performing minimization step: 2011. Total energy = 1425.5706 kcal/mol (1422.6804 without restraints) Performing minimization step: 2012. Total energy = 1425.4717 kcal/mol (1422.5824 without restraints) Performing minimization step: 2013. Total energy = 1425.3727 kcal/mol (1422.4842 without restraints) Performing minimization step: 2014. Total energy = 1425.2734 kcal/mol (1422.3858 without restraints) Performing minimization step: 2015. Total energy = 1425.1744 kcal/mol (1422.2878 without restraints) Performing minimization step: 2016. Total energy = 1425.0753 kcal/mol (1422.1896 without restraints) Performing minimization step: 2017. Total energy = 1424.9763 kcal/mol (1422.0915 without restraints) Performing minimization step: 2018. Total energy = 1424.8775 kcal/mol (1421.9937 without restraints) Performing minimization step: 2019. Total energy = 1424.7788 kcal/mol (1421.8958 without restraints) Performing minimization step: 2020. Total energy = 1424.6800 kcal/mol (1421.7979 without restraints) Performing minimization step: 2021. Total energy = 1424.5813 kcal/mol (1421.7002 without restraints) Performing minimization step: 2022. Total energy = 1424.4826 kcal/mol (1421.6024 without restraints) Performing minimization step: 2023. Total energy = 1424.3838 kcal/mol (1421.5044 without restraints) Performing minimization step: 2024. Total energy = 1424.2851 kcal/mol (1421.4067 without restraints) Performing minimization step: 2025. Total energy = 1424.1863 kcal/mol (1421.3087 without restraints) Performing minimization step: 2026. Total energy = 1424.0877 kcal/mol (1421.2111 without restraints) Performing minimization step: 2027. Total energy = 1423.9892 kcal/mol (1421.1134 without restraints) Performing minimization step: 2028. Total energy = 1423.8907 kcal/mol (1421.0159 without restraints) Performing minimization step: 2029. Total energy = 1423.7926 kcal/mol (1420.9187 without restraints) Performing minimization step: 2030. Total energy = 1423.6945 kcal/mol (1420.8213 without restraints) Performing minimization step: 2031. Total energy = 1423.5960 kcal/mol (1420.7238 without restraints) Performing minimization step: 2032. Total energy = 1423.4976 kcal/mol (1420.6263 without restraints) Performing minimization step: 2033. Total energy = 1423.3991 kcal/mol (1420.5287 without restraints) Performing minimization step: 2034. Total energy = 1423.3008 kcal/mol (1420.4313 without restraints) Performing minimization step: 2035. Total energy = 1423.2022 kcal/mol (1420.3336 without restraints) Performing minimization step: 2036. Total energy = 1423.1039 kcal/mol (1420.2362 without restraints) Performing minimization step: 2037. Total energy = 1423.0056 kcal/mol (1420.1388 without restraints) Performing minimization step: 2038. Total energy = 1422.9075 kcal/mol (1420.0416 without restraints) Performing minimization step: 2039. Total energy = 1422.8091 kcal/mol (1419.9440 without restraints) Performing minimization step: 2040. Total energy = 1422.7108 kcal/mol (1419.8466 without restraints) Performing minimization step: 2041. Total energy = 1422.6126 kcal/mol (1419.7494 without restraints) Performing minimization step: 2042. Total energy = 1422.5145 kcal/mol (1419.6521 without restraints) Performing minimization step: 2043. Total energy = 1422.4166 kcal/mol (1419.5551 without restraints) Performing minimization step: 2044. Total energy = 1422.3184 kcal/mol (1419.4578 without restraints) Performing minimization step: 2045. Total energy = 1422.2201 kcal/mol (1419.3604 without restraints) Performing minimization step: 2046. Total energy = 1422.1221 kcal/mol (1419.2633 without restraints) Performing minimization step: 2047. Total energy = 1422.0241 kcal/mol (1419.1662 without restraints) Performing minimization step: 2048. Total energy = 1421.9262 kcal/mol (1419.0691 without restraints) Performing minimization step: 2049. Total energy = 1421.8283 kcal/mol (1418.9721 without restraints) Performing minimization step: 2050. Total energy = 1421.7304 kcal/mol (1418.8751 without restraints) Performing minimization step: 2051. Total energy = 1421.6325 kcal/mol (1418.7781 without restraints) Performing minimization step: 2052. Total energy = 1421.5349 kcal/mol (1418.6814 without restraints) Performing minimization step: 2053. Total energy = 1421.4371 kcal/mol (1418.5844 without restraints) Performing minimization step: 2054. Total energy = 1421.3393 kcal/mol (1418.4876 without restraints) Performing minimization step: 2055. Total energy = 1421.2416 kcal/mol (1418.3907 without restraints) Performing minimization step: 2056. Total energy = 1421.1438 kcal/mol (1418.2938 without restraints) Performing minimization step: 2057. Total energy = 1421.0462 kcal/mol (1418.1970 without restraints) Performing minimization step: 2058. Total energy = 1420.9485 kcal/mol (1418.1002 without restraints) Performing minimization step: 2059. Total energy = 1420.8507 kcal/mol (1418.0034 without restraints) Performing minimization step: 2060. Total energy = 1420.7530 kcal/mol (1417.9065 without restraints) Performing minimization step: 2061. Total energy = 1420.6554 kcal/mol (1417.8098 without restraints) Performing minimization step: 2062. Total energy = 1420.5579 kcal/mol (1417.7131 without restraints) Performing minimization step: 2063. Total energy = 1420.4604 kcal/mol (1417.6165 without restraints) Performing minimization step: 2064. Total energy = 1420.3629 kcal/mol (1417.5199 without restraints) Performing minimization step: 2065. Total energy = 1420.2655 kcal/mol (1417.4233 without restraints) Performing minimization step: 2066. Total energy = 1420.1680 kcal/mol (1417.3267 without restraints) Performing minimization step: 2067. Total energy = 1420.0706 kcal/mol (1417.2302 without restraints) Performing minimization step: 2068. Total energy = 1419.9737 kcal/mol (1417.1341 without restraints) Performing minimization step: 2069. Total energy = 1419.8762 kcal/mol (1417.0374 without restraints) Performing minimization step: 2070. Total energy = 1419.7788 kcal/mol (1416.9410 without restraints) Performing minimization step: 2071. Total energy = 1419.6819 kcal/mol (1416.8450 without restraints) Performing minimization step: 2072. Total energy = 1419.5846 kcal/mol (1416.7484 without restraints) Performing minimization step: 2073. Total energy = 1419.4873 kcal/mol (1416.6521 without restraints) Performing minimization step: 2074. Total energy = 1419.3898 kcal/mol (1416.5554 without restraints) Performing minimization step: 2075. Total energy = 1419.2923 kcal/mol (1416.4588 without restraints) Performing minimization step: 2076. Total energy = 1419.1952 kcal/mol (1416.3626 without restraints) Performing minimization step: 2077. Total energy = 1419.0984 kcal/mol (1416.2667 without restraints) Performing minimization step: 2078. Total energy = 1419.0014 kcal/mol (1416.1705 without restraints) Performing minimization step: 2079. Total energy = 1418.9043 kcal/mol (1416.0743 without restraints) Performing minimization step: 2080. Total energy = 1418.8071 kcal/mol (1415.9779 without restraints) Performing minimization step: 2081. Total energy = 1418.7098 kcal/mol (1415.8812 without restraints) Performing minimization step: 2082. Total energy = 1418.6125 kcal/mol (1415.7851 without restraints) Performing minimization step: 2083. Total energy = 1418.5158 kcal/mol (1415.6892 without restraints) Performing minimization step: 2084. Total energy = 1418.4189 kcal/mol (1415.5932 without restraints) Performing minimization step: 2085. Total energy = 1418.3220 kcal/mol (1415.4971 without restraints) Performing minimization step: 2086. Total energy = 1418.2253 kcal/mol (1415.4012 without restraints) Performing minimization step: 2087. Total energy = 1418.1284 kcal/mol (1415.3052 without restraints) Performing minimization step: 2088. Total energy = 1418.0318 kcal/mol (1415.2095 without restraints) Performing minimization step: 2089. Total energy = 1417.9348 kcal/mol (1415.1134 without restraints) Performing minimization step: 2090. Total energy = 1417.8379 kcal/mol (1415.0173 without restraints) Performing minimization step: 2091. Total energy = 1417.7413 kcal/mol (1414.9215 without restraints) Performing minimization step: 2092. Total energy = 1417.6448 kcal/mol (1414.8259 without restraints) Performing minimization step: 2093. Total energy = 1417.5480 kcal/mol (1414.7297 without restraints) Performing minimization step: 2094. Total energy = 1417.4514 kcal/mol (1414.6342 without restraints) Performing minimization step: 2095. Total energy = 1417.3548 kcal/mol (1414.5384 without restraints) Performing minimization step: 2096. Total energy = 1417.2583 kcal/mol (1414.4428 without restraints) Performing minimization step: 2097. Total energy = 1417.1619 kcal/mol (1414.3472 without restraints) Performing minimization step: 2098. Total energy = 1417.0654 kcal/mol (1414.2516 without restraints) Performing minimization step: 2099. Total energy = 1416.9689 kcal/mol (1414.1560 without restraints) Performing minimization step: 2100. Total energy = 1416.8727 kcal/mol (1414.0607 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/f42e8b68/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 2101. Total energy = 1416.7762 kcal/mol (1413.9650 without restraints) Performing minimization step: 2102. Total energy = 1416.6798 kcal/mol (1413.8694 without restraints) Performing minimization step: 2103. Total energy = 1416.5836 kcal/mol (1413.7740 without restraints) Performing minimization step: 2104. Total energy = 1416.4873 kcal/mol (1413.6786 without restraints) Performing minimization step: 2105. Total energy = 1416.3911 kcal/mol (1413.5834 without restraints) Performing minimization step: 2106. Total energy = 1416.2952 kcal/mol (1413.4883 without restraints) Performing minimization step: 2107. Total energy = 1416.1996 kcal/mol (1413.3934 without restraints) Performing minimization step: 2108. Total energy = 1416.1034 kcal/mol (1413.2981 without restraints) Performing minimization step: 2109. Total energy = 1416.0073 kcal/mol (1413.2028 without restraints) Performing minimization step: 2110. Total energy = 1415.9112 kcal/mol (1413.1075 without restraints) Performing minimization step: 2111. Total energy = 1415.8151 kcal/mol (1413.0123 without restraints) Performing minimization step: 2112. Total energy = 1415.7193 kcal/mol (1412.9173 without restraints) Performing minimization step: 2113. Total energy = 1415.6232 kcal/mol (1412.8221 without restraints) Performing minimization step: 2114. Total energy = 1415.5273 kcal/mol (1412.7270 without restraints) Performing minimization step: 2115. Total energy = 1415.4313 kcal/mol (1412.6319 without restraints) Performing minimization step: 2116. Total energy = 1415.3354 kcal/mol (1412.5368 without restraints) Performing minimization step: 2117. Total energy = 1415.2395 kcal/mol (1412.4418 without restraints) Performing minimization step: 2118. Total energy = 1415.1437 kcal/mol (1412.3467 without restraints) Performing minimization step: 2119. Total energy = 1415.0478 kcal/mol (1412.2517 without restraints) Performing minimization step: 2120. Total energy = 1414.9520 kcal/mol (1412.1568 without restraints) Performing minimization step: 2121. Total energy = 1414.8562 kcal/mol (1412.0618 without restraints) Performing minimization step: 2122. Total energy = 1414.7605 kcal/mol (1411.9669 without restraints) Performing minimization step: 2123. Total energy = 1414.6647 kcal/mol (1411.8719 without restraints) Performing minimization step: 2124. Total energy = 1414.5687 kcal/mol (1411.7767 without restraints) Performing minimization step: 2125. Total energy = 1414.4728 kcal/mol (1411.6817 without restraints) Performing minimization step: 2126. Total energy = 1414.3772 kcal/mol (1411.5869 without restraints) Performing minimization step: 2127. Total energy = 1414.2818 kcal/mol (1411.4924 without restraints) Performing minimization step: 2128. Total energy = 1414.1863 kcal/mol (1411.3977 without restraints) Performing minimization step: 2129. Total energy = 1414.0910 kcal/mol (1411.3032 without restraints) Performing minimization step: 2130. Total energy = 1413.9955 kcal/mol (1411.2086 without restraints) Performing minimization step: 2131. Total energy = 1413.9001 kcal/mol (1411.1140 without restraints) Performing minimization step: 2132. Total energy = 1413.8045 kcal/mol (1411.0192 without restraints) Performing minimization step: 2133. Total energy = 1413.7091 kcal/mol (1410.9247 without restraints) Performing minimization step: 2134. Total energy = 1413.6138 kcal/mol (1410.8302 without restraints) Performing minimization step: 2135. Total energy = 1413.5185 kcal/mol (1410.7357 without restraints) Performing minimization step: 2136. Total energy = 1413.4233 kcal/mol (1410.6414 without restraints) Performing minimization step: 2137. Total energy = 1413.3282 kcal/mol (1410.5470 without restraints) Performing minimization step: 2138. Total energy = 1413.2332 kcal/mol (1410.4529 without restraints) Performing minimization step: 2139. Total energy = 1413.1382 kcal/mol (1410.3587 without restraints) Performing minimization step: 2140. Total energy = 1413.0436 kcal/mol (1410.2650 without restraints) Performing minimization step: 2141. Total energy = 1412.9488 kcal/mol (1410.1709 without restraints) Performing minimization step: 2142. Total energy = 1412.8537 kcal/mol (1410.0765 without restraints) Performing minimization step: 2143. Total energy = 1412.7585 kcal/mol (1409.9823 without restraints) Performing minimization step: 2144. Total energy = 1412.6635 kcal/mol (1409.8881 without restraints) Performing minimization step: 2145. Total energy = 1412.5685 kcal/mol (1409.7940 without restraints) Performing minimization step: 2146. Total energy = 1412.4736 kcal/mol (1409.6998 without restraints) Performing minimization step: 2147. Total energy = 1412.3787 kcal/mol (1409.6058 without restraints) Performing minimization step: 2148. Total energy = 1412.2838 kcal/mol (1409.5117 without restraints) Performing minimization step: 2149. Total energy = 1412.1889 kcal/mol (1409.4174 without restraints) Performing minimization step: 2150. Total energy = 1412.0939 kcal/mol (1409.3234 without restraints) Performing minimization step: 2151. Total energy = 1411.9991 kcal/mol (1409.2295 without restraints) Performing minimization step: 2152. Total energy = 1411.9042 kcal/mol (1409.1353 without restraints) Performing minimization step: 2153. Total energy = 1411.8095 kcal/mol (1409.0414 without restraints) Performing minimization step: 2154. Total energy = 1411.7150 kcal/mol (1408.9477 without restraints) Performing minimization step: 2155. Total energy = 1411.6204 kcal/mol (1408.8540 without restraints) Performing minimization step: 2156. Total energy = 1411.5258 kcal/mol (1408.7602 without restraints) Performing minimization step: 2157. Total energy = 1411.4312 kcal/mol (1408.6664 without restraints) Performing minimization step: 2158. Total energy = 1411.3365 kcal/mol (1408.5725 without restraints) Performing minimization step: 2159. Total energy = 1411.2419 kcal/mol (1408.4788 without restraints) Performing minimization step: 2160. Total energy = 1411.1476 kcal/mol (1408.3853 without restraints) Performing minimization step: 2161. Total energy = 1411.0531 kcal/mol (1408.2916 without restraints) Performing minimization step: 2162. Total energy = 1410.9585 kcal/mol (1408.1978 without restraints) Performing minimization step: 2163. Total energy = 1410.8643 kcal/mol (1408.1044 without restraints) Performing minimization step: 2164. Total energy = 1410.7699 kcal/mol (1408.0108 without restraints) Performing minimization step: 2165. Total energy = 1410.6756 kcal/mol (1407.9173 without restraints) Performing minimization step: 2166. Total energy = 1410.5816 kcal/mol (1407.8241 without restraints) Performing minimization step: 2167. Total energy = 1410.4874 kcal/mol (1407.7307 without restraints) Performing minimization step: 2168. Total energy = 1410.3932 kcal/mol (1407.6373 without restraints) Performing minimization step: 2169. Total energy = 1410.2994 kcal/mol (1407.5443 without restraints) Performing minimization step: 2170. Total energy = 1410.2052 kcal/mol (1407.4510 without restraints) Performing minimization step: 2171. Total energy = 1410.1113 kcal/mol (1407.3578 without restraints) Performing minimization step: 2172. Total energy = 1410.0171 kcal/mol (1407.2643 without restraints) Performing minimization step: 2173. Total energy = 1409.9229 kcal/mol (1407.1711 without restraints) Performing minimization step: 2174. Total energy = 1409.8289 kcal/mol (1407.0779 without restraints) Performing minimization step: 2175. Total energy = 1409.7349 kcal/mol (1406.9847 without restraints) Performing minimization step: 2176. Total energy = 1409.6410 kcal/mol (1406.8915 without restraints) Performing minimization step: 2177. Total energy = 1409.5471 kcal/mol (1406.7985 without restraints) Performing minimization step: 2178. Total energy = 1409.4530 kcal/mol (1406.7052 without restraints) Performing minimization step: 2179. Total energy = 1409.3594 kcal/mol (1406.6124 without restraints) Performing minimization step: 2180. Total energy = 1409.2656 kcal/mol (1406.5194 without restraints) Performing minimization step: 2181. Total energy = 1409.1718 kcal/mol (1406.4264 without restraints) Performing minimization step: 2182. Total energy = 1409.0781 kcal/mol (1406.3335 without restraints) Performing minimization step: 2183. Total energy = 1408.9844 kcal/mol (1406.2405 without restraints) Performing minimization step: 2184. Total energy = 1408.8907 kcal/mol (1406.1477 without restraints) Performing minimization step: 2185. Total energy = 1408.7972 kcal/mol (1406.0550 without restraints) Performing minimization step: 2186. Total energy = 1408.7033 kcal/mol (1405.9618 without restraints) Performing minimization step: 2187. Total energy = 1408.6095 kcal/mol (1405.8688 without restraints) Performing minimization step: 2188. Total energy = 1408.5161 kcal/mol (1405.7763 without restraints) Performing minimization step: 2189. Total energy = 1408.4226 kcal/mol (1405.6835 without restraints) Performing minimization step: 2190. Total energy = 1408.3291 kcal/mol (1405.5908 without restraints) Performing minimization step: 2191. Total energy = 1408.2357 kcal/mol (1405.4982 without restraints) Performing minimization step: 2192. Total energy = 1408.1421 kcal/mol (1405.4054 without restraints) Performing minimization step: 2193. Total energy = 1408.0487 kcal/mol (1405.3129 without restraints) Performing minimization step: 2194. Total energy = 1407.9554 kcal/mol (1405.2203 without restraints) Performing minimization step: 2195. Total energy = 1407.8621 kcal/mol (1405.1278 without restraints) Performing minimization step: 2196. Total energy = 1407.7689 kcal/mol (1405.0356 without restraints) Performing minimization step: 2197. Total energy = 1407.6759 kcal/mol (1404.9432 without restraints) Performing minimization step: 2198. Total energy = 1407.5825 kcal/mol (1404.8505 without restraints) Performing minimization step: 2199. Total energy = 1407.4893 kcal/mol (1404.7582 without restraints) Performing minimization step: 2200. Total energy = 1407.3962 kcal/mol (1404.6658 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/f42e8b68/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 2201. Total energy = 1407.3031 kcal/mol (1404.5735 without restraints) Performing minimization step: 2202. Total energy = 1407.2100 kcal/mol (1404.4813 without restraints) Performing minimization step: 2203. Total energy = 1407.1172 kcal/mol (1404.3892 without restraints) Performing minimization step: 2204. Total energy = 1407.0242 kcal/mol (1404.2970 without restraints) Performing minimization step: 2205. Total energy = 1406.9308 kcal/mol (1404.2044 without restraints) Performing minimization step: 2206. Total energy = 1406.8377 kcal/mol (1404.1121 without restraints) Performing minimization step: 2207. Total energy = 1406.7449 kcal/mol (1404.0200 without restraints) Performing minimization step: 2208. Total energy = 1406.6520 kcal/mol (1403.9279 without restraints) Performing minimization step: 2209. Total energy = 1406.5592 kcal/mol (1403.8359 without restraints) Performing minimization step: 2210. Total energy = 1406.4664 kcal/mol (1403.7439 without restraints) Performing minimization step: 2211. Total energy = 1406.3737 kcal/mol (1403.6519 without restraints) Performing minimization step: 2212. Total energy = 1406.2809 kcal/mol (1403.5600 without restraints) Performing minimization step: 2213. Total energy = 1406.1883 kcal/mol (1403.4682 without restraints) Performing minimization step: 2214. Total energy = 1406.0953 kcal/mol (1403.3760 without restraints) Performing minimization step: 2215. Total energy = 1406.0027 kcal/mol (1403.2842 without restraints) Performing minimization step: 2216. Total energy = 1405.9102 kcal/mol (1403.1924 without restraints) Performing minimization step: 2217. Total energy = 1405.8180 kcal/mol (1403.1010 without restraints) Performing minimization step: 2218. Total energy = 1405.7256 kcal/mol (1403.0093 without restraints) Performing minimization step: 2219. Total energy = 1405.6331 kcal/mol (1402.9177 without restraints) Performing minimization step: 2220. Total energy = 1405.5407 kcal/mol (1402.8260 without restraints) Performing minimization step: 2221. Total energy = 1405.4483 kcal/mol (1402.7344 without restraints) Performing minimization step: 2222. Total energy = 1405.3560 kcal/mol (1402.6429 without restraints) Performing minimization step: 2223. Total energy = 1405.2637 kcal/mol (1402.5514 without restraints) Performing minimization step: 2224. Total energy = 1405.1716 kcal/mol (1402.4601 without restraints) Performing minimization step: 2225. Total energy = 1405.0796 kcal/mol (1402.3688 without restraints) Performing minimization step: 2226. Total energy = 1404.9870 kcal/mol (1402.2770 without restraints) Performing minimization step: 2227. Total energy = 1404.8956 kcal/mol (1402.1864 without restraints) Performing minimization step: 2228. Total energy = 1404.8035 kcal/mol (1402.0951 without restraints) Performing minimization step: 2229. Total energy = 1404.7113 kcal/mol (1402.0035 without restraints) Performing minimization step: 2230. Total energy = 1404.6191 kcal/mol (1401.9121 without restraints) Performing minimization step: 2231. Total energy = 1404.5270 kcal/mol (1401.8209 without restraints) Performing minimization step: 2232. Total energy = 1404.4351 kcal/mol (1401.7297 without restraints) Performing minimization step: 2233. Total energy = 1404.3432 kcal/mol (1401.6386 without restraints) Performing minimization step: 2234. Total energy = 1404.2513 kcal/mol (1401.5474 without restraints) Performing minimization step: 2235. Total energy = 1404.1594 kcal/mol (1401.4563 without restraints) Performing minimization step: 2236. Total energy = 1404.0675 kcal/mol (1401.3653 without restraints) Performing minimization step: 2237. Total energy = 1403.9758 kcal/mol (1401.2743 without restraints) Performing minimization step: 2238. Total energy = 1403.8838 kcal/mol (1401.1831 without restraints) Performing minimization step: 2239. Total energy = 1403.7921 kcal/mol (1401.0921 without restraints) Performing minimization step: 2240. Total energy = 1403.7001 kcal/mol (1401.0009 without restraints) Performing minimization step: 2241. Total energy = 1403.6085 kcal/mol (1400.9101 without restraints) Performing minimization step: 2242. Total energy = 1403.5168 kcal/mol (1400.8192 without restraints) Performing minimization step: 2243. Total energy = 1403.4253 kcal/mol (1400.7284 without restraints) Performing minimization step: 2244. Total energy = 1403.3337 kcal/mol (1400.6376 without restraints) Performing minimization step: 2245. Total energy = 1403.2423 kcal/mol (1400.5469 without restraints) Performing minimization step: 2246. Total energy = 1403.1508 kcal/mol (1400.4562 without restraints) Performing minimization step: 2247. Total energy = 1403.0594 kcal/mol (1400.3655 without restraints) Performing minimization step: 2248. Total energy = 1402.9680 kcal/mol (1400.2749 without restraints) Performing minimization step: 2249. Total energy = 1402.8767 kcal/mol (1400.1845 without restraints) Performing minimization step: 2250. Total energy = 1402.7855 kcal/mol (1400.0940 without restraints) Performing minimization step: 2251. Total energy = 1402.6940 kcal/mol (1400.0032 without restraints) Performing minimization step: 2252. Total energy = 1402.6028 kcal/mol (1399.9128 without restraints) Performing minimization step: 2253. Total energy = 1402.5119 kcal/mol (1399.8226 without restraints) Performing minimization step: 2254. Total energy = 1402.4206 kcal/mol (1399.7321 without restraints) Performing minimization step: 2255. Total energy = 1402.3295 kcal/mol (1399.6418 without restraints) Performing minimization step: 2256. Total energy = 1402.2384 kcal/mol (1399.5514 without restraints) Performing minimization step: 2257. Total energy = 1402.1472 kcal/mol (1399.4609 without restraints) Performing minimization step: 2258. Total energy = 1402.0563 kcal/mol (1399.3708 without restraints) Performing minimization step: 2259. Total energy = 1401.9653 kcal/mol (1399.2806 without restraints) Performing minimization step: 2260. Total energy = 1401.8742 kcal/mol (1399.1902 without restraints) Performing minimization step: 2261. Total energy = 1401.7832 kcal/mol (1399.1000 without restraints) Performing minimization step: 2262. Total energy = 1401.6923 kcal/mol (1399.0099 without restraints) Performing minimization step: 2263. Total energy = 1401.6014 kcal/mol (1398.9196 without restraints) Performing minimization step: 2264. Total energy = 1401.5105 kcal/mol (1398.8296 without restraints) Performing minimization step: 2265. Total energy = 1401.4198 kcal/mol (1398.7396 without restraints) Performing minimization step: 2266. Total energy = 1401.3291 kcal/mol (1398.6497 without restraints) Performing minimization step: 2267. Total energy = 1401.2386 kcal/mol (1398.5599 without restraints) Performing minimization step: 2268. Total energy = 1401.1479 kcal/mol (1398.4700 without restraints) Performing minimization step: 2269. Total energy = 1401.0576 kcal/mol (1398.3804 without restraints) Performing minimization step: 2270. Total energy = 1400.9670 kcal/mol (1398.2906 without restraints) Performing minimization step: 2271. Total energy = 1400.8765 kcal/mol (1398.2008 without restraints) Performing minimization step: 2272. Total energy = 1400.7858 kcal/mol (1398.1108 without restraints) Performing minimization step: 2273. Total energy = 1400.6954 kcal/mol (1398.0212 without restraints) Performing minimization step: 2274. Total energy = 1400.6049 kcal/mol (1397.9315 without restraints) Performing minimization step: 2275. Total energy = 1400.5145 kcal/mol (1397.8418 without restraints) Performing minimization step: 2276. Total energy = 1400.4241 kcal/mol (1397.7522 without restraints) Performing minimization step: 2277. Total energy = 1400.3336 kcal/mol (1397.6625 without restraints) Performing minimization step: 2278. Total energy = 1400.2435 kcal/mol (1397.5731 without restraints) Performing minimization step: 2279. Total energy = 1400.1532 kcal/mol (1397.4836 without restraints) Performing minimization step: 2280. Total energy = 1400.0629 kcal/mol (1397.3940 without restraints) Performing minimization step: 2281. Total energy = 1399.9727 kcal/mol (1397.3046 without restraints) Performing minimization step: 2282. Total energy = 1399.8826 kcal/mol (1397.2152 without restraints) Performing minimization step: 2283. Total energy = 1399.7925 kcal/mol (1397.1259 without restraints) Performing minimization step: 2284. Total energy = 1399.7024 kcal/mol (1397.0366 without restraints) Performing minimization step: 2285. Total energy = 1399.6124 kcal/mol (1396.9473 without restraints) Performing minimization step: 2286. Total energy = 1399.5224 kcal/mol (1396.8580 without restraints) Performing minimization step: 2287. Total energy = 1399.4325 kcal/mol (1396.7689 without restraints) Performing minimization step: 2288. Total energy = 1399.3426 kcal/mol (1396.6797 without restraints) Performing minimization step: 2289. Total energy = 1399.2528 kcal/mol (1396.5906 without restraints) Performing minimization step: 2290. Total energy = 1399.1632 kcal/mol (1396.5017 without restraints) Performing minimization step: 2291. Total energy = 1399.0736 kcal/mol (1396.4130 without restraints) Performing minimization step: 2292. Total energy = 1398.9835 kcal/mol (1396.3236 without restraints) Performing minimization step: 2293. Total energy = 1398.8939 kcal/mol (1396.2347 without restraints) Performing minimization step: 2294. Total energy = 1398.8042 kcal/mol (1396.1457 without restraints) Performing minimization step: 2295. Total energy = 1398.7147 kcal/mol (1396.0570 without restraints) Performing minimization step: 2296. Total energy = 1398.6252 kcal/mol (1395.9682 without restraints) Performing minimization step: 2297. Total energy = 1398.5356 kcal/mol (1395.8794 without restraints) Performing minimization step: 2298. Total energy = 1398.4455 kcal/mol (1395.7900 without restraints) Performing minimization step: 2299. Total energy = 1398.3560 kcal/mol (1395.7013 without restraints) Performing minimization step: 2300. Total energy = 1398.2665 kcal/mol (1395.6125 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/f42e8b68/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 2301. Total energy = 1398.1771 kcal/mol (1395.5239 without restraints) Performing minimization step: 2302. Total energy = 1398.0878 kcal/mol (1395.4353 without restraints) Performing minimization step: 2303. Total energy = 1397.9983 kcal/mol (1395.3465 without restraints) Performing minimization step: 2304. Total energy = 1397.9090 kcal/mol (1395.2579 without restraints) Performing minimization step: 2305. Total energy = 1397.8198 kcal/mol (1395.1695 without restraints) Performing minimization step: 2306. Total energy = 1397.7308 kcal/mol (1395.0812 without restraints) Performing minimization step: 2307. Total energy = 1397.6415 kcal/mol (1394.9926 without restraints) Performing minimization step: 2308. Total energy = 1397.5524 kcal/mol (1394.9042 without restraints) Performing minimization step: 2309. Total energy = 1397.4633 kcal/mol (1394.8159 without restraints) Performing minimization step: 2310. Total energy = 1397.3743 kcal/mol (1394.7276 without restraints) Performing minimization step: 2311. Total energy = 1397.2845 kcal/mol (1394.6386 without restraints) Performing minimization step: 2312. Total energy = 1397.1957 kcal/mol (1394.5507 without restraints) Performing minimization step: 2313. Total energy = 1397.1070 kcal/mol (1394.4626 without restraints) Performing minimization step: 2314. Total energy = 1397.0181 kcal/mol (1394.3744 without restraints) Performing minimization step: 2315. Total energy = 1396.9293 kcal/mol (1394.2863 without restraints) Performing minimization step: 2316. Total energy = 1396.8405 kcal/mol (1394.1982 without restraints) Performing minimization step: 2317. Total energy = 1396.7519 kcal/mol (1394.1104 without restraints) Performing minimization step: 2318. Total energy = 1396.6632 kcal/mol (1394.0223 without restraints) Performing minimization step: 2319. Total energy = 1396.5744 kcal/mol (1393.9344 without restraints) Performing minimization step: 2320. Total energy = 1396.4858 kcal/mol (1393.8465 without restraints) Performing minimization step: 2321. Total energy = 1396.3970 kcal/mol (1393.7584 without restraints) Performing minimization step: 2322. Total energy = 1396.3084 kcal/mol (1393.6705 without restraints) Performing minimization step: 2323. Total energy = 1396.2196 kcal/mol (1393.5825 without restraints) Performing minimization step: 2324. Total energy = 1396.1311 kcal/mol (1393.4947 without restraints) Performing minimization step: 2325. Total energy = 1396.0426 kcal/mol (1393.4068 without restraints) Performing minimization step: 2326. Total energy = 1395.9541 kcal/mol (1393.3191 without restraints) Performing minimization step: 2327. Total energy = 1395.8656 kcal/mol (1393.2313 without restraints) Performing minimization step: 2328. Total energy = 1395.7771 kcal/mol (1393.1436 without restraints) Performing minimization step: 2329. Total energy = 1395.6888 kcal/mol (1393.0560 without restraints) Performing minimization step: 2330. Total energy = 1395.6004 kcal/mol (1392.9682 without restraints) Performing minimization step: 2331. Total energy = 1395.5124 kcal/mol (1392.8810 without restraints) Performing minimization step: 2332. Total energy = 1395.4241 kcal/mol (1392.7935 without restraints) Performing minimization step: 2333. Total energy = 1395.3357 kcal/mol (1392.7058 without restraints) Performing minimization step: 2334. Total energy = 1395.2476 kcal/mol (1392.6185 without restraints) Performing minimization step: 2335. Total energy = 1395.1595 kcal/mol (1392.5311 without restraints) Performing minimization step: 2336. Total energy = 1395.0715 kcal/mol (1392.4438 without restraints) Performing minimization step: 2337. Total energy = 1394.9835 kcal/mol (1392.3565 without restraints) Performing minimization step: 2338. Total energy = 1394.8955 kcal/mol (1392.2693 without restraints) Performing minimization step: 2339. Total energy = 1394.8075 kcal/mol (1392.1819 without restraints) Performing minimization step: 2340. Total energy = 1394.7198 kcal/mol (1392.0950 without restraints) Performing minimization step: 2341. Total energy = 1394.6319 kcal/mol (1392.0078 without restraints) Performing minimization step: 2342. Total energy = 1394.5441 kcal/mol (1391.9207 without restraints) Performing minimization step: 2343. Total energy = 1394.4564 kcal/mol (1391.8337 without restraints) Performing minimization step: 2344. Total energy = 1394.3686 kcal/mol (1391.7467 without restraints) Performing minimization step: 2345. Total energy = 1394.2809 kcal/mol (1391.6597 without restraints) Performing minimization step: 2346. Total energy = 1394.1933 kcal/mol (1391.5728 without restraints) Performing minimization step: 2347. Total energy = 1394.1055 kcal/mol (1391.4858 without restraints) Performing minimization step: 2348. Total energy = 1394.0180 kcal/mol (1391.3989 without restraints) Performing minimization step: 2349. Total energy = 1393.9308 kcal/mol (1391.3125 without restraints) Performing minimization step: 2350. Total energy = 1393.8433 kcal/mol (1391.2257 without restraints) Performing minimization step: 2351. Total energy = 1393.7557 kcal/mol (1391.1388 without restraints) Performing minimization step: 2352. Total energy = 1393.6683 kcal/mol (1391.0521 without restraints) Performing minimization step: 2353. Total energy = 1393.5809 kcal/mol (1390.9654 without restraints) Performing minimization step: 2354. Total energy = 1393.4936 kcal/mol (1390.8788 without restraints) Performing minimization step: 2355. Total energy = 1393.4065 kcal/mol (1390.7924 without restraints) Performing minimization step: 2356. Total energy = 1393.3192 kcal/mol (1390.7058 without restraints) Performing minimization step: 2357. Total energy = 1393.2322 kcal/mol (1390.6197 without restraints) Performing minimization step: 2358. Total energy = 1393.1452 kcal/mol (1390.5333 without restraints) Performing minimization step: 2359. Total energy = 1393.0577 kcal/mol (1390.4464 without restraints) Performing minimization step: 2360. Total energy = 1392.9701 kcal/mol (1390.3596 without restraints) Performing minimization step: 2361. Total energy = 1392.8833 kcal/mol (1390.2735 without restraints) Performing minimization step: 2362. Total energy = 1392.7963 kcal/mol (1390.1872 without restraints) Performing minimization step: 2363. Total energy = 1392.7093 kcal/mol (1390.1009 without restraints) Performing minimization step: 2364. Total energy = 1392.6226 kcal/mol (1390.0150 without restraints) Performing minimization step: 2365. Total energy = 1392.5357 kcal/mol (1389.9288 without restraints) Performing minimization step: 2366. Total energy = 1392.4488 kcal/mol (1389.8426 without restraints) Performing minimization step: 2367. Total energy = 1392.3622 kcal/mol (1389.7567 without restraints) Performing minimization step: 2368. Total energy = 1392.2755 kcal/mol (1389.6706 without restraints) Performing minimization step: 2369. Total energy = 1392.1887 kcal/mol (1389.5846 without restraints) Performing minimization step: 2370. Total energy = 1392.1020 kcal/mol (1389.4986 without restraints) Performing minimization step: 2371. Total energy = 1392.0153 kcal/mol (1389.4126 without restraints) Performing minimization step: 2372. Total energy = 1391.9287 kcal/mol (1389.3267 without restraints) Performing minimization step: 2373. Total energy = 1391.8421 kcal/mol (1389.2408 without restraints) Performing minimization step: 2374. Total energy = 1391.7556 kcal/mol (1389.1550 without restraints) Performing minimization step: 2375. Total energy = 1391.6691 kcal/mol (1389.0692 without restraints) Performing minimization step: 2376. Total energy = 1391.5826 kcal/mol (1388.9834 without restraints) Performing minimization step: 2377. Total energy = 1391.4960 kcal/mol (1388.8975 without restraints) Performing minimization step: 2378. Total energy = 1391.4095 kcal/mol (1388.8118 without restraints) Performing minimization step: 2379. Total energy = 1391.3228 kcal/mol (1388.7257 without restraints) Performing minimization step: 2380. Total energy = 1391.2365 kcal/mol (1388.6401 without restraints) Performing minimization step: 2381. Total energy = 1391.1495 kcal/mol (1388.5539 without restraints) Performing minimization step: 2382. Total energy = 1391.0633 kcal/mol (1388.4683 without restraints) Performing minimization step: 2383. Total energy = 1390.9771 kcal/mol (1388.3829 without restraints) Performing minimization step: 2384. Total energy = 1390.8909 kcal/mol (1388.2974 without restraints) Performing minimization step: 2385. Total energy = 1390.8047 kcal/mol (1388.2118 without restraints) Performing minimization step: 2386. Total energy = 1390.7186 kcal/mol (1388.1264 without restraints) Performing minimization step: 2387. Total energy = 1390.6327 kcal/mol (1388.0413 without restraints) Performing minimization step: 2388. Total energy = 1390.5467 kcal/mol (1387.9560 without restraints) Performing minimization step: 2389. Total energy = 1390.4605 kcal/mol (1387.8705 without restraints) Performing minimization step: 2390. Total energy = 1390.3746 kcal/mol (1387.7853 without restraints) Performing minimization step: 2391. Total energy = 1390.2887 kcal/mol (1387.7000 without restraints) Performing minimization step: 2392. Total energy = 1390.2031 kcal/mol (1387.6152 without restraints) Performing minimization step: 2393. Total energy = 1390.1173 kcal/mol (1387.5300 without restraints) Performing minimization step: 2394. Total energy = 1390.0315 kcal/mol (1387.4449 without restraints) Performing minimization step: 2395. Total energy = 1389.9458 kcal/mol (1387.3599 without restraints) Performing minimization step: 2396. Total energy = 1389.8601 kcal/mol (1387.2749 without restraints) Performing minimization step: 2397. Total energy = 1389.7747 kcal/mol (1387.1902 without restraints) Performing minimization step: 2398. Total energy = 1389.6892 kcal/mol (1387.1053 without restraints) Performing minimization step: 2399. Total energy = 1389.6035 kcal/mol (1387.0204 without restraints) Performing minimization step: 2400. Total energy = 1389.5178 kcal/mol (1386.9354 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/f42e8b68/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 2401. Total energy = 1389.4321 kcal/mol (1386.8504 without restraints) Performing minimization step: 2402. Total energy = 1389.3466 kcal/mol (1386.7656 without restraints) Performing minimization step: 2403. Total energy = 1389.2612 kcal/mol (1386.6809 without restraints) Performing minimization step: 2404. Total energy = 1389.1758 kcal/mol (1386.5962 without restraints) Performing minimization step: 2405. Total energy = 1389.0904 kcal/mol (1386.5114 without restraints) Performing minimization step: 2406. Total energy = 1389.0046 kcal/mol (1386.4264 without restraints) Performing minimization step: 2407. Total energy = 1388.9194 kcal/mol (1386.3418 without restraints) Performing minimization step: 2408. Total energy = 1388.8344 kcal/mol (1386.2576 without restraints) Performing minimization step: 2409. Total energy = 1388.7492 kcal/mol (1386.1731 without restraints) Performing minimization step: 2410. Total energy = 1388.6643 kcal/mol (1386.0890 without restraints) Performing minimization step: 2411. Total energy = 1388.5793 kcal/mol (1386.0044 without restraints) Performing minimization step: 2412. Total energy = 1388.4941 kcal/mol (1385.9200 without restraints) Performing minimization step: 2413. Total energy = 1388.4090 kcal/mol (1385.8355 without restraints) Performing minimization step: 2414. Total energy = 1388.3236 kcal/mol (1385.7509 without restraints) Performing minimization step: 2415. Total energy = 1388.2391 kcal/mol (1385.6670 without restraints) Performing minimization step: 2416. Total energy = 1388.1540 kcal/mol (1385.5826 without restraints) Performing minimization step: 2417. Total energy = 1388.0691 kcal/mol (1385.4984 without restraints) Performing minimization step: 2418. Total energy = 1387.9843 kcal/mol (1385.4143 without restraints) Performing minimization step: 2419. Total energy = 1387.8995 kcal/mol (1385.3302 without restraints) Performing minimization step: 2420. Total energy = 1387.8147 kcal/mol (1385.2462 without restraints) Performing minimization step: 2421. Total energy = 1387.7303 kcal/mol (1385.1626 without restraints) Performing minimization step: 2422. Total energy = 1387.6458 kcal/mol (1385.0786 without restraints) Performing minimization step: 2423. Total energy = 1387.5609 kcal/mol (1384.9944 without restraints) Performing minimization step: 2424. Total energy = 1387.4763 kcal/mol (1384.9104 without restraints) Performing minimization step: 2425. Total energy = 1387.3917 kcal/mol (1384.8266 without restraints) Performing minimization step: 2426. Total energy = 1387.3072 kcal/mol (1384.7427 without restraints) Performing minimization step: 2427. Total energy = 1387.2228 kcal/mol (1384.6590 without restraints) Performing minimization step: 2428. Total energy = 1387.1383 kcal/mol (1384.5751 without restraints) Performing minimization step: 2429. Total energy = 1387.0538 kcal/mol (1384.4913 without restraints) Performing minimization step: 2430. Total energy = 1386.9690 kcal/mol (1384.4072 without restraints) Performing minimization step: 2431. Total energy = 1386.8847 kcal/mol (1384.3236 without restraints) Performing minimization step: 2432. Total energy = 1386.8004 kcal/mol (1384.2400 without restraints) Performing minimization step: 2433. Total energy = 1386.7161 kcal/mol (1384.1564 without restraints) Performing minimization step: 2434. Total energy = 1386.6319 kcal/mol (1384.0729 without restraints) Performing minimization step: 2435. Total energy = 1386.5478 kcal/mol (1383.9894 without restraints) Performing minimization step: 2436. Total energy = 1386.4637 kcal/mol (1383.9060 without restraints) Performing minimization step: 2437. Total energy = 1386.3793 kcal/mol (1383.8222 without restraints) Performing minimization step: 2438. Total energy = 1386.2951 kcal/mol (1383.7388 without restraints) Performing minimization step: 2439. Total energy = 1386.2109 kcal/mol (1383.6553 without restraints) Performing minimization step: 2440. Total energy = 1386.1270 kcal/mol (1383.5720 without restraints) Performing minimization step: 2441. Total energy = 1386.0432 kcal/mol (1383.4888 without restraints) Performing minimization step: 2442. Total energy = 1385.9592 kcal/mol (1383.4055 without restraints) Performing minimization step: 2443. Total energy = 1385.8758 kcal/mol (1383.3229 without restraints) Performing minimization step: 2444. Total energy = 1385.7920 kcal/mol (1383.2396 without restraints) Performing minimization step: 2445. Total energy = 1385.7081 kcal/mol (1383.1565 without restraints) Performing minimization step: 2446. Total energy = 1385.6243 kcal/mol (1383.0734 without restraints) Performing minimization step: 2447. Total energy = 1385.5405 kcal/mol (1382.9904 without restraints) Performing minimization step: 2448. Total energy = 1385.4566 kcal/mol (1382.9070 without restraints) Performing minimization step: 2449. Total energy = 1385.3729 kcal/mol (1382.8241 without restraints) Performing minimization step: 2450. Total energy = 1385.2891 kcal/mol (1382.7409 without restraints) Performing minimization step: 2451. Total energy = 1385.2054 kcal/mol (1382.6578 without restraints) Performing minimization step: 2452. Total energy = 1385.1221 kcal/mol (1382.5752 without restraints) Performing minimization step: 2453. Total energy = 1385.0383 kcal/mol (1382.4921 without restraints) Performing minimization step: 2454. Total energy = 1384.9549 kcal/mol (1382.4094 without restraints) Performing minimization step: 2455. Total energy = 1384.8715 kcal/mol (1382.3267 without restraints) Performing minimization step: 2456. Total energy = 1384.7882 kcal/mol (1382.2440 without restraints) Performing minimization step: 2457. Total energy = 1384.7050 kcal/mol (1382.1615 without restraints) Performing minimization step: 2458. Total energy = 1384.6214 kcal/mol (1382.0787 without restraints) Performing minimization step: 2459. Total energy = 1384.5382 kcal/mol (1381.9961 without restraints) Performing minimization step: 2460. Total energy = 1384.4551 kcal/mol (1381.9136 without restraints) Performing minimization step: 2461. Total energy = 1384.3719 kcal/mol (1381.8311 without restraints) Performing minimization step: 2462. Total energy = 1384.2888 kcal/mol (1381.7486 without restraints) Performing minimization step: 2463. Total energy = 1384.2057 kcal/mol (1381.6662 without restraints) Performing minimization step: 2464. Total energy = 1384.1224 kcal/mol (1381.5836 without restraints) Performing minimization step: 2465. Total energy = 1384.0390 kcal/mol (1381.5008 without restraints) Performing minimization step: 2466. Total energy = 1383.9560 kcal/mol (1381.4185 without restraints) Performing minimization step: 2467. Total energy = 1383.8731 kcal/mol (1381.3363 without restraints) Performing minimization step: 2468. Total energy = 1383.7902 kcal/mol (1381.2540 without restraints) Performing minimization step: 2469. Total energy = 1383.7073 kcal/mol (1381.1718 without restraints) Performing minimization step: 2470. Total energy = 1383.6245 kcal/mol (1381.0896 without restraints) Performing minimization step: 2471. Total energy = 1383.5415 kcal/mol (1381.0073 without restraints) Performing minimization step: 2472. Total energy = 1383.4585 kcal/mol (1380.9250 without restraints) Performing minimization step: 2473. Total energy = 1383.3754 kcal/mol (1380.8426 without restraints) Performing minimization step: 2474. Total energy = 1383.2935 kcal/mol (1380.7614 without restraints) Performing minimization step: 2475. Total energy = 1383.2109 kcal/mol (1380.6794 without restraints) Performing minimization step: 2476. Total energy = 1383.1283 kcal/mol (1380.5975 without restraints) Performing minimization step: 2477. Total energy = 1383.0456 kcal/mol (1380.5154 without restraints) Performing minimization step: 2478. Total energy = 1382.9630 kcal/mol (1380.4335 without restraints) Performing minimization step: 2479. Total energy = 1382.8806 kcal/mol (1380.3517 without restraints) Performing minimization step: 2480. Total energy = 1382.7981 kcal/mol (1380.2699 without restraints) Performing minimization step: 2481. Total energy = 1382.7157 kcal/mol (1380.1882 without restraints) Performing minimization step: 2482. Total energy = 1382.6333 kcal/mol (1380.1064 without restraints) Performing minimization step: 2483. Total energy = 1382.5509 kcal/mol (1380.0246 without restraints) Performing minimization step: 2484. Total energy = 1382.4686 kcal/mol (1379.9430 without restraints) Performing minimization step: 2485. Total energy = 1382.3860 kcal/mol (1379.8611 without restraints) Performing minimization step: 2486. Total energy = 1382.3036 kcal/mol (1379.7794 without restraints) Performing minimization step: 2487. Total energy = 1382.2215 kcal/mol (1379.6979 without restraints) Performing minimization step: 2488. Total energy = 1382.1393 kcal/mol (1379.6164 without restraints) Performing minimization step: 2489. Total energy = 1382.0570 kcal/mol (1379.5347 without restraints) Performing minimization step: 2490. Total energy = 1381.9749 kcal/mol (1379.4533 without restraints) Performing minimization step: 2491. Total energy = 1381.8929 kcal/mol (1379.3719 without restraints) Performing minimization step: 2492. Total energy = 1381.8107 kcal/mol (1379.2904 without restraints) Performing minimization step: 2493. Total energy = 1381.7287 kcal/mol (1379.2090 without restraints) Performing minimization step: 2494. Total energy = 1381.6468 kcal/mol (1379.1278 without restraints) Performing minimization step: 2495. Total energy = 1381.5651 kcal/mol (1379.0468 without restraints) Performing minimization step: 2496. Total energy = 1381.4833 kcal/mol (1378.9656 without restraints) Performing minimization step: 2497. Total energy = 1381.4019 kcal/mol (1378.8851 without restraints) Performing minimization step: 2498. Total energy = 1381.3203 kcal/mol (1378.8040 without restraints) Performing minimization step: 2499. Total energy = 1381.2386 kcal/mol (1378.7229 without restraints) Performing minimization step: 2500. Total energy = 1381.1569 kcal/mol (1378.6418 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/f42e8b68/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 2501. Total energy = 1381.0755 kcal/mol (1378.5611 without restraints) Performing minimization step: 2502. Total energy = 1380.9938 kcal/mol (1378.4800 without restraints) Performing minimization step: 2503. Total energy = 1380.9120 kcal/mol (1378.3989 without restraints) Performing minimization step: 2504. Total energy = 1380.8305 kcal/mol (1378.3180 without restraints) Performing minimization step: 2505. Total energy = 1380.7490 kcal/mol (1378.2371 without restraints) Performing minimization step: 2506. Total energy = 1380.6675 kcal/mol (1378.1563 without restraints) Performing minimization step: 2507. Total energy = 1380.5858 kcal/mol (1378.0753 without restraints) Performing minimization step: 2508. Total energy = 1380.5046 kcal/mol (1377.9947 without restraints) Performing minimization step: 2509. Total energy = 1380.4233 kcal/mol (1377.9141 without restraints) Performing minimization step: 2510. Total energy = 1380.3419 kcal/mol (1377.8334 without restraints) Performing minimization step: 2511. Total energy = 1380.2606 kcal/mol (1377.7527 without restraints) Performing minimization step: 2512. Total energy = 1380.1793 kcal/mol (1377.6721 without restraints) Performing minimization step: 2513. Total energy = 1380.0981 kcal/mol (1377.5915 without restraints) Performing minimization step: 2514. Total energy = 1380.0169 kcal/mol (1377.5110 without restraints) Performing minimization step: 2515. Total energy = 1379.9358 kcal/mol (1377.4305 without restraints) Performing minimization step: 2516. Total energy = 1379.8547 kcal/mol (1377.3500 without restraints) Performing minimization step: 2517. Total energy = 1379.7736 kcal/mol (1377.2696 without restraints) Performing minimization step: 2518. Total energy = 1379.6926 kcal/mol (1377.1892 without restraints) Performing minimization step: 2519. Total energy = 1379.6116 kcal/mol (1377.1089 without restraints) Performing minimization step: 2520. Total energy = 1379.5304 kcal/mol (1377.0283 without restraints) Performing minimization step: 2521. Total energy = 1379.4495 kcal/mol (1376.9480 without restraints) Performing minimization step: 2522. Total energy = 1379.3684 kcal/mol (1376.8676 without restraints) Performing minimization step: 2523. Total energy = 1379.2879 kcal/mol (1376.7877 without restraints) Performing minimization step: 2524. Total energy = 1379.2070 kcal/mol (1376.7075 without restraints) Performing minimization step: 2525. Total energy = 1379.1262 kcal/mol (1376.6271 without restraints) Performing minimization step: 2526. Total energy = 1379.0453 kcal/mol (1376.5470 without restraints) Performing minimization step: 2527. Total energy = 1378.9646 kcal/mol (1376.4670 without restraints) Performing minimization step: 2528. Total energy = 1378.8839 kcal/mol (1376.3869 without restraints) Performing minimization step: 2529. Total energy = 1378.8030 kcal/mol (1376.3067 without restraints) Performing minimization step: 2530. Total energy = 1378.7220 kcal/mol (1376.2263 without restraints) Performing minimization step: 2531. Total energy = 1378.6414 kcal/mol (1376.1464 without restraints) Performing minimization step: 2532. Total energy = 1378.5609 kcal/mol (1376.0665 without restraints) Performing minimization step: 2533. Total energy = 1378.4803 kcal/mol (1375.9866 without restraints) Performing minimization step: 2534. Total energy = 1378.3997 kcal/mol (1375.9066 without restraints) Performing minimization step: 2535. Total energy = 1378.3191 kcal/mol (1375.8266 without restraints) Performing minimization step: 2536. Total energy = 1378.2387 kcal/mol (1375.7469 without restraints) Performing minimization step: 2537. Total energy = 1378.1584 kcal/mol (1375.6672 without restraints) Performing minimization step: 2538. Total energy = 1378.0780 kcal/mol (1375.5874 without restraints) Performing minimization step: 2539. Total energy = 1377.9977 kcal/mol (1375.5078 without restraints) Performing minimization step: 2540. Total energy = 1377.9173 kcal/mol (1375.4279 without restraints) Performing minimization step: 2541. Total energy = 1377.8368 kcal/mol (1375.3482 without restraints) Performing minimization step: 2542. Total energy = 1377.7564 kcal/mol (1375.2683 without restraints) Performing minimization step: 2543. Total energy = 1377.6762 kcal/mol (1375.1887 without restraints) Performing minimization step: 2544. Total energy = 1377.5961 kcal/mol (1375.1093 without restraints) Performing minimization step: 2545. Total energy = 1377.5160 kcal/mol (1375.0299 without restraints) Performing minimization step: 2546. Total energy = 1377.4358 kcal/mol (1374.9504 without restraints) Performing minimization step: 2547. Total energy = 1377.3555 kcal/mol (1374.8707 without restraints) Performing minimization step: 2548. Total energy = 1377.2754 kcal/mol (1374.7912 without restraints) Performing minimization step: 2549. Total energy = 1377.1955 kcal/mol (1374.7119 without restraints) Performing minimization step: 2550. Total energy = 1377.1156 kcal/mol (1374.6326 without restraints) Performing minimization step: 2551. Total energy = 1377.0357 kcal/mol (1374.5534 without restraints) Performing minimization step: 2552. Total energy = 1376.9557 kcal/mol (1374.4740 without restraints) Performing minimization step: 2553. Total energy = 1376.8761 kcal/mol (1374.3950 without restraints) Performing minimization step: 2554. Total energy = 1376.7964 kcal/mol (1374.3159 without restraints) Performing minimization step: 2555. Total energy = 1376.7163 kcal/mol (1374.2365 without restraints) Performing minimization step: 2556. Total energy = 1376.6366 kcal/mol (1374.1574 without restraints) Performing minimization step: 2557. Total energy = 1376.5570 kcal/mol (1374.0785 without restraints) Performing minimization step: 2558. Total energy = 1376.4774 kcal/mol (1373.9994 without restraints) Performing minimization step: 2559. Total energy = 1376.3978 kcal/mol (1373.9205 without restraints) Performing minimization step: 2560. Total energy = 1376.3183 kcal/mol (1373.8416 without restraints) Performing minimization step: 2561. Total energy = 1376.2387 kcal/mol (1373.7628 without restraints) Performing minimization step: 2562. Total energy = 1376.1591 kcal/mol (1373.6837 without restraints) Performing minimization step: 2563. Total energy = 1376.0795 kcal/mol (1373.6047 without restraints) Performing minimization step: 2564. Total energy = 1376.0004 kcal/mol (1373.5262 without restraints) Performing minimization step: 2565. Total energy = 1375.9210 kcal/mol (1373.4475 without restraints) Performing minimization step: 2566. Total energy = 1375.8420 kcal/mol (1373.3690 without restraints) Performing minimization step: 2567. Total energy = 1375.7628 kcal/mol (1373.2906 without restraints) Performing minimization step: 2568. Total energy = 1375.6838 kcal/mol (1373.2121 without restraints) Performing minimization step: 2569. Total energy = 1375.6046 kcal/mol (1373.1335 without restraints) Performing minimization step: 2570. Total energy = 1375.5254 kcal/mol (1373.0550 without restraints) Performing minimization step: 2571. Total energy = 1375.4461 kcal/mol (1372.9763 without restraints) Performing minimization step: 2572. Total energy = 1375.3675 kcal/mol (1372.8982 without restraints) Performing minimization step: 2573. Total energy = 1375.2884 kcal/mol (1372.8198 without restraints) Performing minimization step: 2574. Total energy = 1375.2093 kcal/mol (1372.7414 without restraints) Performing minimization step: 2575. Total energy = 1375.1303 kcal/mol (1372.6630 without restraints) Performing minimization step: 2576. Total energy = 1375.0514 kcal/mol (1372.5847 without restraints) Performing minimization step: 2577. Total energy = 1374.9725 kcal/mol (1372.5064 without restraints) Performing minimization step: 2578. Total energy = 1374.8936 kcal/mol (1372.4281 without restraints) Performing minimization step: 2579. Total energy = 1374.8147 kcal/mol (1372.3499 without restraints) Performing minimization step: 2580. Total energy = 1374.7356 kcal/mol (1372.2714 without restraints) Performing minimization step: 2581. Total energy = 1374.6566 kcal/mol (1372.1930 without restraints) Performing minimization step: 2582. Total energy = 1374.5777 kcal/mol (1372.1148 without restraints) Performing minimization step: 2583. Total energy = 1374.4990 kcal/mol (1372.0367 without restraints) Performing minimization step: 2584. Total energy = 1374.4203 kcal/mol (1371.9586 without restraints) Performing minimization step: 2585. Total energy = 1374.3417 kcal/mol (1371.8806 without restraints) Performing minimization step: 2586. Total energy = 1374.2629 kcal/mol (1371.8024 without restraints) Performing minimization step: 2587. Total energy = 1374.1843 kcal/mol (1371.7244 without restraints) Performing minimization step: 2588. Total energy = 1374.1060 kcal/mol (1371.6469 without restraints) Performing minimization step: 2589. Total energy = 1374.0277 kcal/mol (1371.5690 without restraints) Performing minimization step: 2590. Total energy = 1373.9492 kcal/mol (1371.4912 without restraints) Performing minimization step: 2591. Total energy = 1373.8707 kcal/mol (1371.4133 without restraints) Performing minimization step: 2592. Total energy = 1373.7923 kcal/mol (1371.3355 without restraints) Performing minimization step: 2593. Total energy = 1373.7139 kcal/mol (1371.2577 without restraints) Performing minimization step: 2594. Total energy = 1373.6356 kcal/mol (1371.1800 without restraints) Performing minimization step: 2595. Total energy = 1373.5574 kcal/mol (1371.1023 without restraints) Performing minimization step: 2596. Total energy = 1373.4790 kcal/mol (1371.0246 without restraints) Performing minimization step: 2597. Total energy = 1373.4004 kcal/mol (1370.9466 without restraints) Performing minimization step: 2598. Total energy = 1373.3222 kcal/mol (1370.8691 without restraints) Performing minimization step: 2599. Total energy = 1373.2440 kcal/mol (1370.7915 without restraints) Performing minimization step: 2600. Total energy = 1373.1659 kcal/mol (1370.7140 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/f42e8b68/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 2601. Total energy = 1373.0878 kcal/mol (1370.6365 without restraints) Performing minimization step: 2602. Total energy = 1373.0097 kcal/mol (1370.5590 without restraints) Performing minimization step: 2603. Total energy = 1372.9318 kcal/mol (1370.4818 without restraints) Performing minimization step: 2604. Total energy = 1372.8538 kcal/mol (1370.4044 without restraints) Performing minimization step: 2605. Total energy = 1372.7759 kcal/mol (1370.3270 without restraints) Performing minimization step: 2606. Total energy = 1372.6979 kcal/mol (1370.2497 without restraints) Performing minimization step: 2607. Total energy = 1372.6203 kcal/mol (1370.1726 without restraints) Performing minimization step: 2608. Total energy = 1372.5425 kcal/mol (1370.0956 without restraints) Performing minimization step: 2609. Total energy = 1372.4648 kcal/mol (1370.0184 without restraints) Performing minimization step: 2610. Total energy = 1372.3868 kcal/mol (1369.9410 without restraints) Performing minimization step: 2611. Total energy = 1372.3090 kcal/mol (1369.8638 without restraints) Performing minimization step: 2612. Total energy = 1372.2315 kcal/mol (1369.7869 without restraints) Performing minimization step: 2613. Total energy = 1372.1538 kcal/mol (1369.7098 without restraints) Performing minimization step: 2614. Total energy = 1372.0762 kcal/mol (1369.6328 without restraints) Performing minimization step: 2615. Total energy = 1371.9987 kcal/mol (1369.5560 without restraints) Performing minimization step: 2616. Total energy = 1371.9210 kcal/mol (1369.4788 without restraints) Performing minimization step: 2617. Total energy = 1371.8432 kcal/mol (1369.4016 without restraints) Performing minimization step: 2618. Total energy = 1371.7657 kcal/mol (1369.3247 without restraints) Performing minimization step: 2619. Total energy = 1371.6882 kcal/mol (1369.2478 without restraints) Performing minimization step: 2620. Total energy = 1371.6107 kcal/mol (1369.1709 without restraints) Performing minimization step: 2621. Total energy = 1371.5332 kcal/mol (1369.0941 without restraints) Performing minimization step: 2622. Total energy = 1371.4558 kcal/mol (1369.0173 without restraints) Performing minimization step: 2623. Total energy = 1371.3785 kcal/mol (1368.9405 without restraints) Performing minimization step: 2624. Total energy = 1371.3012 kcal/mol (1368.8638 without restraints) Performing minimization step: 2625. Total energy = 1371.2241 kcal/mol (1368.7873 without restraints) Performing minimization step: 2626. Total energy = 1371.1468 kcal/mol (1368.7107 without restraints) Performing minimization step: 2627. Total energy = 1371.0696 kcal/mol (1368.6340 without restraints) Performing minimization step: 2628. Total energy = 1370.9924 kcal/mol (1368.5574 without restraints) Performing minimization step: 2629. Total energy = 1370.9152 kcal/mol (1368.4808 without restraints) Performing minimization step: 2630. Total energy = 1370.8380 kcal/mol (1368.4043 without restraints) Performing minimization step: 2631. Total energy = 1370.7609 kcal/mol (1368.3278 without restraints) Performing minimization step: 2632. Total energy = 1370.6839 kcal/mol (1368.2513 without restraints) Performing minimization step: 2633. Total energy = 1370.6068 kcal/mol (1368.1749 without restraints) Performing minimization step: 2634. Total energy = 1370.5299 kcal/mol (1368.0985 without restraints) Performing minimization step: 2635. Total energy = 1370.4528 kcal/mol (1368.0220 without restraints) Performing minimization step: 2636. Total energy = 1370.3756 kcal/mol (1367.9455 without restraints) Performing minimization step: 2637. Total energy = 1370.2992 kcal/mol (1367.8697 without restraints) Performing minimization step: 2638. Total energy = 1370.2226 kcal/mol (1367.7936 without restraints) Performing minimization step: 2639. Total energy = 1370.1459 kcal/mol (1367.7175 without restraints) Performing minimization step: 2640. Total energy = 1370.0691 kcal/mol (1367.6413 without restraints) Performing minimization step: 2641. Total energy = 1369.9924 kcal/mol (1367.5652 without restraints) Performing minimization step: 2642. Total energy = 1369.9157 kcal/mol (1367.4891 without restraints) Performing minimization step: 2643. Total energy = 1369.8390 kcal/mol (1367.4130 without restraints) Performing minimization step: 2644. Total energy = 1369.7624 kcal/mol (1367.3370 without restraints) Performing minimization step: 2645. Total energy = 1369.6858 kcal/mol (1367.2610 without restraints) Performing minimization step: 2646. Total energy = 1369.6090 kcal/mol (1367.1847 without restraints) Performing minimization step: 2647. Total energy = 1369.5325 kcal/mol (1367.1089 without restraints) Performing minimization step: 2648. Total energy = 1369.4561 kcal/mol (1367.0331 without restraints) Performing minimization step: 2649. Total energy = 1369.3797 kcal/mol (1366.9572 without restraints) Performing minimization step: 2650. Total energy = 1369.3032 kcal/mol (1366.8813 without restraints) Performing minimization step: 2651. Total energy = 1369.2268 kcal/mol (1366.8055 without restraints) Performing minimization step: 2652. Total energy = 1369.1504 kcal/mol (1366.7297 without restraints) Performing minimization step: 2653. Total energy = 1369.0740 kcal/mol (1366.6539 without restraints) Performing minimization step: 2654. Total energy = 1368.9977 kcal/mol (1366.5782 without restraints) Performing minimization step: 2655. Total energy = 1368.9213 kcal/mol (1366.5024 without restraints) Performing minimization step: 2656. Total energy = 1368.8450 kcal/mol (1366.4267 without restraints) Performing minimization step: 2657. Total energy = 1368.7690 kcal/mol (1366.3513 without restraints) Performing minimization step: 2658. Total energy = 1368.6929 kcal/mol (1366.2759 without restraints) Performing minimization step: 2659. Total energy = 1368.6168 kcal/mol (1366.2003 without restraints) Performing minimization step: 2660. Total energy = 1368.5406 kcal/mol (1366.1245 without restraints) Performing minimization step: 2661. Total energy = 1368.4644 kcal/mol (1366.0490 without restraints) Performing minimization step: 2662. Total energy = 1368.3884 kcal/mol (1365.9736 without restraints) Performing minimization step: 2663. Total energy = 1368.3132 kcal/mol (1365.8990 without restraints) Performing minimization step: 2664. Total energy = 1368.2372 kcal/mol (1365.8236 without restraints) Performing minimization step: 2665. Total energy = 1368.1612 kcal/mol (1365.7482 without restraints) Performing minimization step: 2666. Total energy = 1368.0853 kcal/mol (1365.6728 without restraints) Performing minimization step: 2667. Total energy = 1368.0094 kcal/mol (1365.5975 without restraints) Performing minimization step: 2668. Total energy = 1367.9335 kcal/mol (1365.5222 without restraints) Performing minimization step: 2669. Total energy = 1367.8577 kcal/mol (1365.4470 without restraints) Performing minimization step: 2670. Total energy = 1367.7818 kcal/mol (1365.3717 without restraints) Performing minimization step: 2671. Total energy = 1367.7063 kcal/mol (1365.2967 without restraints) Performing minimization step: 2672. Total energy = 1367.6307 kcal/mol (1365.2218 without restraints) Performing minimization step: 2673. Total energy = 1367.5550 kcal/mol (1365.1466 without restraints) Performing minimization step: 2674. Total energy = 1367.4795 kcal/mol (1365.0717 without restraints) Performing minimization step: 2675. Total energy = 1367.4039 kcal/mol (1364.9967 without restraints) Performing minimization step: 2676. Total energy = 1367.3283 kcal/mol (1364.9216 without restraints) Performing minimization step: 2677. Total energy = 1367.2527 kcal/mol (1364.8467 without restraints) Performing minimization step: 2678. Total energy = 1367.1769 kcal/mol (1364.7714 without restraints) Performing minimization step: 2679. Total energy = 1367.1013 kcal/mol (1364.6963 without restraints) Performing minimization step: 2680. Total energy = 1367.0258 kcal/mol (1364.6217 without restraints) Performing minimization step: 2681. Total energy = 1366.9508 kcal/mol (1364.5471 without restraints) Performing minimization step: 2682. Total energy = 1366.8756 kcal/mol (1364.4724 without restraints) Performing minimization step: 2683. Total energy = 1366.8002 kcal/mol (1364.3976 without restraints) Performing minimization step: 2684. Total energy = 1366.7248 kcal/mol (1364.3228 without restraints) Performing minimization step: 2685. Total energy = 1366.6495 kcal/mol (1364.2481 without restraints) Performing minimization step: 2686. Total energy = 1366.5744 kcal/mol (1364.1736 without restraints) Performing minimization step: 2687. Total energy = 1366.4991 kcal/mol (1364.0988 without restraints) Performing minimization step: 2688. Total energy = 1366.4241 kcal/mol (1364.0244 without restraints) Performing minimization step: 2689. Total energy = 1366.3490 kcal/mol (1363.9499 without restraints) Performing minimization step: 2690. Total energy = 1366.2739 kcal/mol (1363.8753 without restraints) Performing minimization step: 2691. Total energy = 1366.1986 kcal/mol (1363.8006 without restraints) Performing minimization step: 2692. Total energy = 1366.1233 kcal/mol (1363.7259 without restraints) Performing minimization step: 2693. Total energy = 1366.0482 kcal/mol (1363.6514 without restraints) Performing minimization step: 2694. Total energy = 1365.9732 kcal/mol (1363.5770 without restraints) Performing minimization step: 2695. Total energy = 1365.8982 kcal/mol (1363.5025 without restraints) Performing minimization step: 2696. Total energy = 1365.8232 kcal/mol (1363.4281 without restraints) Performing minimization step: 2697. Total energy = 1365.7481 kcal/mol (1363.3535 without restraints) Performing minimization step: 2698. Total energy = 1365.6727 kcal/mol (1363.2788 without restraints) Performing minimization step: 2699. Total energy = 1365.5978 kcal/mol (1363.2044 without restraints) Performing minimization step: 2700. Total energy = 1365.5225 kcal/mol (1363.1297 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/f42e8b68/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 2701. Total energy = 1365.4477 kcal/mol (1363.0555 without restraints) Performing minimization step: 2702. Total energy = 1365.3729 kcal/mol (1362.9813 without restraints) Performing minimization step: 2703. Total energy = 1365.2980 kcal/mol (1362.9069 without restraints) Performing minimization step: 2704. Total energy = 1365.2233 kcal/mol (1362.8327 without restraints) Performing minimization step: 2705. Total energy = 1365.1485 kcal/mol (1362.7584 without restraints) Performing minimization step: 2706. Total energy = 1365.0738 kcal/mol (1362.6844 without restraints) Performing minimization step: 2707. Total energy = 1364.9989 kcal/mol (1362.6101 without restraints) Performing minimization step: 2708. Total energy = 1364.9243 kcal/mol (1362.5360 without restraints) Performing minimization step: 2709. Total energy = 1364.8498 kcal/mol (1362.4621 without restraints) Performing minimization step: 2710. Total energy = 1364.7752 kcal/mol (1362.3880 without restraints) Performing minimization step: 2711. Total energy = 1364.7007 kcal/mol (1362.3141 without restraints) Performing minimization step: 2712. Total energy = 1364.6262 kcal/mol (1362.2402 without restraints) Performing minimization step: 2713. Total energy = 1364.5519 kcal/mol (1362.1666 without restraints) Performing minimization step: 2714. Total energy = 1364.4776 kcal/mol (1362.0927 without restraints) Performing minimization step: 2715. Total energy = 1364.4032 kcal/mol (1362.0190 without restraints) Performing minimization step: 2716. Total energy = 1364.3288 kcal/mol (1361.9449 without restraints) Performing minimization step: 2717. Total energy = 1364.2544 kcal/mol (1361.8712 without restraints) Performing minimization step: 2718. Total energy = 1364.1801 kcal/mol (1361.7975 without restraints) Performing minimization step: 2719. Total energy = 1364.1061 kcal/mol (1361.7243 without restraints) Performing minimization step: 2720. Total energy = 1364.0320 kcal/mol (1361.6505 without restraints) Performing minimization step: 2721. Total energy = 1363.9576 kcal/mol (1361.5767 without restraints) Performing minimization step: 2722. Total energy = 1363.8834 kcal/mol (1361.5031 without restraints) Performing minimization step: 2723. Total energy = 1363.8091 kcal/mol (1361.4294 without restraints) Performing minimization step: 2724. Total energy = 1363.7351 kcal/mol (1361.3559 without restraints) Performing minimization step: 2725. Total energy = 1363.6610 kcal/mol (1361.2824 without restraints) Performing minimization step: 2726. Total energy = 1363.5866 kcal/mol (1361.2085 without restraints) Performing minimization step: 2727. Total energy = 1363.5126 kcal/mol (1361.1351 without restraints) Performing minimization step: 2728. Total energy = 1363.4387 kcal/mol (1361.0617 without restraints) Performing minimization step: 2729. Total energy = 1363.3648 kcal/mol (1360.9884 without restraints) Performing minimization step: 2730. Total energy = 1363.2909 kcal/mol (1360.9151 without restraints) Performing minimization step: 2731. Total energy = 1363.2171 kcal/mol (1360.8418 without restraints) Performing minimization step: 2732. Total energy = 1363.1431 kcal/mol (1360.7684 without restraints) Performing minimization step: 2733. Total energy = 1363.0693 kcal/mol (1360.6952 without restraints) Performing minimization step: 2734. Total energy = 1362.9956 kcal/mol (1360.6220 without restraints) Performing minimization step: 2735. Total energy = 1362.9219 kcal/mol (1360.5488 without restraints) Performing minimization step: 2736. Total energy = 1362.8480 kcal/mol (1360.4755 without restraints) Performing minimization step: 2737. Total energy = 1362.7741 kcal/mol (1360.4022 without restraints) Performing minimization step: 2738. Total energy = 1362.7005 kcal/mol (1360.3291 without restraints) Performing minimization step: 2739. Total energy = 1362.6271 kcal/mol (1360.2563 without restraints) Performing minimization step: 2740. Total energy = 1362.5536 kcal/mol (1360.1834 without restraints) Performing minimization step: 2741. Total energy = 1362.4801 kcal/mol (1360.1103 without restraints) Performing minimization step: 2742. Total energy = 1362.4065 kcal/mol (1360.0373 without restraints) Performing minimization step: 2743. Total energy = 1362.3329 kcal/mol (1359.9643 without restraints) Performing minimization step: 2744. Total energy = 1362.2593 kcal/mol (1359.8912 without restraints) Performing minimization step: 2745. Total energy = 1362.1859 kcal/mol (1359.8184 without restraints) Performing minimization step: 2746. Total energy = 1362.1124 kcal/mol (1359.7454 without restraints) Performing minimization step: 2747. Total energy = 1362.0390 kcal/mol (1359.6727 without restraints) Performing minimization step: 2748. Total energy = 1361.9660 kcal/mol (1359.6001 without restraints) Performing minimization step: 2749. Total energy = 1361.8927 kcal/mol (1359.5274 without restraints) Performing minimization step: 2750. Total energy = 1361.8195 kcal/mol (1359.4548 without restraints) Performing minimization step: 2751. Total energy = 1361.7463 kcal/mol (1359.3821 without restraints) Performing minimization step: 2752. Total energy = 1361.6733 kcal/mol (1359.3097 without restraints) Performing minimization step: 2753. Total energy = 1361.6002 kcal/mol (1359.2372 without restraints) Performing minimization step: 2754. Total energy = 1361.5271 kcal/mol (1359.1646 without restraints) Performing minimization step: 2755. Total energy = 1361.4536 kcal/mol (1359.0916 without restraints) Performing minimization step: 2756. Total energy = 1361.3806 kcal/mol (1359.0192 without restraints) Performing minimization step: 2757. Total energy = 1361.3074 kcal/mol (1358.9465 without restraints) Performing minimization step: 2758. Total energy = 1361.2346 kcal/mol (1358.8743 without restraints) Performing minimization step: 2759. Total energy = 1361.1619 kcal/mol (1358.8021 without restraints) Performing minimization step: 2760. Total energy = 1361.0892 kcal/mol (1358.7299 without restraints) Performing minimization step: 2761. Total energy = 1361.0163 kcal/mol (1358.6576 without restraints) Performing minimization step: 2762. Total energy = 1360.9432 kcal/mol (1358.5851 without restraints) Performing minimization step: 2763. Total energy = 1360.8705 kcal/mol (1358.5129 without restraints) Performing minimization step: 2764. Total energy = 1360.7977 kcal/mol (1358.4407 without restraints) Performing minimization step: 2765. Total energy = 1360.7250 kcal/mol (1358.3685 without restraints) Performing minimization step: 2766. Total energy = 1360.6523 kcal/mol (1358.2964 without restraints) Performing minimization step: 2767. Total energy = 1360.5796 kcal/mol (1358.2242 without restraints) Performing minimization step: 2768. Total energy = 1360.5066 kcal/mol (1358.1517 without restraints) Performing minimization step: 2769. Total energy = 1360.4340 kcal/mol (1358.0797 without restraints) Performing minimization step: 2770. Total energy = 1360.3615 kcal/mol (1358.0077 without restraints) Performing minimization step: 2771. Total energy = 1360.2890 kcal/mol (1357.9358 without restraints) Performing minimization step: 2772. Total energy = 1360.2165 kcal/mol (1357.8638 without restraints) Performing minimization step: 2773. Total energy = 1360.1440 kcal/mol (1357.7919 without restraints) Performing minimization step: 2774. Total energy = 1360.0714 kcal/mol (1357.7198 without restraints) Performing minimization step: 2775. Total energy = 1359.9989 kcal/mol (1357.6479 without restraints) Performing minimization step: 2776. Total energy = 1359.9268 kcal/mol (1357.5763 without restraints) Performing minimization step: 2777. Total energy = 1359.8547 kcal/mol (1357.5047 without restraints) Performing minimization step: 2778. Total energy = 1359.7824 kcal/mol (1357.4330 without restraints) Performing minimization step: 2779. Total energy = 1359.7101 kcal/mol (1357.3612 without restraints) Performing minimization step: 2780. Total energy = 1359.6378 kcal/mol (1357.2895 without restraints) Performing minimization step: 2781. Total energy = 1359.5654 kcal/mol (1357.2176 without restraints) Performing minimization step: 2782. Total energy = 1359.4930 kcal/mol (1357.1458 without restraints) Performing minimization step: 2783. Total energy = 1359.4207 kcal/mol (1357.0739 without restraints) Performing minimization step: 2784. Total energy = 1359.3485 kcal/mol (1357.0024 without restraints) Performing minimization step: 2785. Total energy = 1359.2764 kcal/mol (1356.9308 without restraints) Performing minimization step: 2786. Total energy = 1359.2044 kcal/mol (1356.8593 without restraints) Performing minimization step: 2787. Total energy = 1359.1322 kcal/mol (1356.7876 without restraints) Performing minimization step: 2788. Total energy = 1359.0602 kcal/mol (1356.7162 without restraints) Performing minimization step: 2789. Total energy = 1358.9882 kcal/mol (1356.6448 without restraints) Performing minimization step: 2790. Total energy = 1358.9163 kcal/mol (1356.5734 without restraints) Performing minimization step: 2791. Total energy = 1358.8443 kcal/mol (1356.5018 without restraints) Performing minimization step: 2792. Total energy = 1358.7725 kcal/mol (1356.4305 without restraints) Performing minimization step: 2793. Total energy = 1358.7005 kcal/mol (1356.3592 without restraints) Performing minimization step: 2794. Total energy = 1358.6288 kcal/mol (1356.2880 without restraints) Performing minimization step: 2795. Total energy = 1358.5570 kcal/mol (1356.2168 without restraints) Performing minimization step: 2796. Total energy = 1358.4855 kcal/mol (1356.1458 without restraints) Performing minimization step: 2797. Total energy = 1358.4140 kcal/mol (1356.0748 without restraints) Performing minimization step: 2798. Total energy = 1358.3422 kcal/mol (1356.0035 without restraints) Performing minimization step: 2799. Total energy = 1358.2705 kcal/mol (1355.9324 without restraints) Performing minimization step: 2800. Total energy = 1358.1989 kcal/mol (1355.8614 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/f42e8b68/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 2801. Total energy = 1358.1269 kcal/mol (1355.7896 without restraints) Performing minimization step: 2802. Total energy = 1358.0552 kcal/mol (1355.7188 without restraints) Performing minimization step: 2803. Total energy = 1357.9838 kcal/mol (1355.6479 without restraints) Performing minimization step: 2804. Total energy = 1357.9124 kcal/mol (1355.5771 without restraints) Performing minimization step: 2805. Total energy = 1357.8411 kcal/mol (1355.5062 without restraints) Performing minimization step: 2806. Total energy = 1357.7697 kcal/mol (1355.4354 without restraints) Performing minimization step: 2807. Total energy = 1357.6983 kcal/mol (1355.3645 without restraints) Performing minimization step: 2808. Total energy = 1357.6270 kcal/mol (1355.2937 without restraints) Performing minimization step: 2809. Total energy = 1357.5555 kcal/mol (1355.2227 without restraints) Performing minimization step: 2810. Total energy = 1357.4840 kcal/mol (1355.1518 without restraints) Performing minimization step: 2811. Total energy = 1357.4128 kcal/mol (1355.0811 without restraints) Performing minimization step: 2812. Total energy = 1357.3413 kcal/mol (1355.0101 without restraints) Performing minimization step: 2813. Total energy = 1357.2702 kcal/mol (1354.9396 without restraints) Performing minimization step: 2814. Total energy = 1357.1990 kcal/mol (1354.8688 without restraints) Performing minimization step: 2815. Total energy = 1357.1278 kcal/mol (1354.7981 without restraints) Performing minimization step: 2816. Total energy = 1357.0566 kcal/mol (1354.7275 without restraints) Performing minimization step: 2817. Total energy = 1356.9856 kcal/mol (1354.6570 without restraints) Performing minimization step: 2818. Total energy = 1356.9146 kcal/mol (1354.5866 without restraints) Performing minimization step: 2819. Total energy = 1356.8436 kcal/mol (1354.5161 without restraints) Performing minimization step: 2820. Total energy = 1356.7728 kcal/mol (1354.4459 without restraints) Performing minimization step: 2821. Total energy = 1356.7019 kcal/mol (1354.3755 without restraints) Performing minimization step: 2822. Total energy = 1356.6310 kcal/mol (1354.3051 without restraints) Performing minimization step: 2823. Total energy = 1356.5601 kcal/mol (1354.2348 without restraints) Performing minimization step: 2824. Total energy = 1356.4893 kcal/mol (1354.1644 without restraints) Performing minimization step: 2825. Total energy = 1356.4185 kcal/mol (1354.0942 without restraints) Performing minimization step: 2826. Total energy = 1356.3478 kcal/mol (1354.0240 without restraints) Performing minimization step: 2827. Total energy = 1356.2774 kcal/mol (1353.9541 without restraints) Performing minimization step: 2828. Total energy = 1356.2067 kcal/mol (1353.8840 without restraints) Performing minimization step: 2829. Total energy = 1356.1361 kcal/mol (1353.8139 without restraints) Performing minimization step: 2830. Total energy = 1356.0652 kcal/mol (1353.7435 without restraints) Performing minimization step: 2831. Total energy = 1355.9945 kcal/mol (1353.6733 without restraints) Performing minimization step: 2832. Total energy = 1355.9243 kcal/mol (1353.6037 without restraints) Performing minimization step: 2833. Total energy = 1355.8539 kcal/mol (1353.5337 without restraints) Performing minimization step: 2834. Total energy = 1355.7833 kcal/mol (1353.4638 without restraints) Performing minimization step: 2835. Total energy = 1355.7130 kcal/mol (1353.3939 without restraints) Performing minimization step: 2836. Total energy = 1355.6426 kcal/mol (1353.3240 without restraints) Performing minimization step: 2837. Total energy = 1355.5722 kcal/mol (1353.2541 without restraints) Performing minimization step: 2838. Total energy = 1355.5016 kcal/mol (1353.1841 without restraints) Performing minimization step: 2839. Total energy = 1355.4311 kcal/mol (1353.1141 without restraints) Performing minimization step: 2840. Total energy = 1355.3608 kcal/mol (1353.0443 without restraints) Performing minimization step: 2841. Total energy = 1355.2906 kcal/mol (1352.9746 without restraints) Performing minimization step: 2842. Total energy = 1355.2204 kcal/mol (1352.9049 without restraints) Performing minimization step: 2843. Total energy = 1355.1502 kcal/mol (1352.8353 without restraints) Performing minimization step: 2844. Total energy = 1355.0801 kcal/mol (1352.7657 without restraints) Performing minimization step: 2845. Total energy = 1355.0102 kcal/mol (1352.6963 without restraints) Performing minimization step: 2846. Total energy = 1354.9401 kcal/mol (1352.6268 without restraints) Performing minimization step: 2847. Total energy = 1354.8703 kcal/mol (1352.5574 without restraints) Performing minimization step: 2848. Total energy = 1354.8005 kcal/mol (1352.4882 without restraints) Performing minimization step: 2849. Total energy = 1354.7305 kcal/mol (1352.4187 without restraints) Performing minimization step: 2850. Total energy = 1354.6606 kcal/mol (1352.3493 without restraints) Performing minimization step: 2851. Total energy = 1354.5907 kcal/mol (1352.2799 without restraints) Performing minimization step: 2852. Total energy = 1354.5208 kcal/mol (1352.2105 without restraints) Performing minimization step: 2853. Total energy = 1354.4510 kcal/mol (1352.1412 without restraints) Performing minimization step: 2854. Total energy = 1354.3812 kcal/mol (1352.0719 without restraints) Performing minimization step: 2855. Total energy = 1354.3114 kcal/mol (1352.0026 without restraints) Performing minimization step: 2856. Total energy = 1354.2416 kcal/mol (1351.9334 without restraints) Performing minimization step: 2857. Total energy = 1354.1719 kcal/mol (1351.8642 without restraints) Performing minimization step: 2858. Total energy = 1354.1021 kcal/mol (1351.7949 without restraints) Performing minimization step: 2859. Total energy = 1354.0324 kcal/mol (1351.7258 without restraints) Performing minimization step: 2860. Total energy = 1353.9629 kcal/mol (1351.6567 without restraints) Performing minimization step: 2861. Total energy = 1353.8933 kcal/mol (1351.5876 without restraints) Performing minimization step: 2862. Total energy = 1353.8239 kcal/mol (1351.5188 without restraints) Performing minimization step: 2863. Total energy = 1353.7544 kcal/mol (1351.4496 without restraints) Performing minimization step: 2864. Total energy = 1353.6850 kcal/mol (1351.3808 without restraints) Performing minimization step: 2865. Total energy = 1353.6155 kcal/mol (1351.3119 without restraints) Performing minimization step: 2866. Total energy = 1353.5461 kcal/mol (1351.2430 without restraints) Performing minimization step: 2867. Total energy = 1353.4761 kcal/mol (1351.1735 without restraints) Performing minimization step: 2868. Total energy = 1353.4072 kcal/mol (1351.1051 without restraints) Performing minimization step: 2869. Total energy = 1353.3376 kcal/mol (1351.0361 without restraints) Performing minimization step: 2870. Total energy = 1353.2680 kcal/mol (1350.9669 without restraints) Performing minimization step: 2871. Total energy = 1353.1988 kcal/mol (1350.8983 without restraints) Performing minimization step: 2872. Total energy = 1353.1295 kcal/mol (1350.8295 without restraints) Performing minimization step: 2873. Total energy = 1353.0604 kcal/mol (1350.7609 without restraints) Performing minimization step: 2874. Total energy = 1352.9913 kcal/mol (1350.6923 without restraints) Performing minimization step: 2875. Total energy = 1352.9222 kcal/mol (1350.6237 without restraints) Performing minimization step: 2876. Total energy = 1352.8532 kcal/mol (1350.5553 without restraints) Performing minimization step: 2877. Total energy = 1352.7846 kcal/mol (1350.4871 without restraints) Performing minimization step: 2878. Total energy = 1352.7155 kcal/mol (1350.4186 without restraints) Performing minimization step: 2879. Total energy = 1352.6465 kcal/mol (1350.3501 without restraints) Performing minimization step: 2880. Total energy = 1352.5775 kcal/mol (1350.2816 without restraints) Performing minimization step: 2881. Total energy = 1352.5086 kcal/mol (1350.2132 without restraints) Performing minimization step: 2882. Total energy = 1352.4398 kcal/mol (1350.1448 without restraints) Performing minimization step: 2883. Total energy = 1352.3709 kcal/mol (1350.0765 without restraints) Performing minimization step: 2884. Total energy = 1352.3021 kcal/mol (1350.0081 without restraints) Performing minimization step: 2885. Total energy = 1352.2333 kcal/mol (1349.9399 without restraints) Performing minimization step: 2886. Total energy = 1352.1648 kcal/mol (1349.8719 without restraints) Performing minimization step: 2887. Total energy = 1352.0962 kcal/mol (1349.8038 without restraints) Performing minimization step: 2888. Total energy = 1352.0275 kcal/mol (1349.7356 without restraints) Performing minimization step: 2889. Total energy = 1351.9589 kcal/mol (1349.6675 without restraints) Performing minimization step: 2890. Total energy = 1351.8903 kcal/mol (1349.5994 without restraints) Performing minimization step: 2891. Total energy = 1351.8214 kcal/mol (1349.5309 without restraints) Performing minimization step: 2892. Total energy = 1351.7528 kcal/mol (1349.4629 without restraints) Performing minimization step: 2893. Total energy = 1351.6843 kcal/mol (1349.3949 without restraints) Performing minimization step: 2894. Total energy = 1351.6161 kcal/mol (1349.3272 without restraints) Performing minimization step: 2895. Total energy = 1351.5477 kcal/mol (1349.2593 without restraints) Performing minimization step: 2896. Total energy = 1351.4795 kcal/mol (1349.1916 without restraints) Performing minimization step: 2897. Total energy = 1351.4111 kcal/mol (1349.1237 without restraints) Performing minimization step: 2898. Total energy = 1351.3428 kcal/mol (1349.0559 without restraints) Performing minimization step: 2899. Total energy = 1351.2746 kcal/mol (1348.9882 without restraints) Performing minimization step: 2900. Total energy = 1351.2063 kcal/mol (1348.9204 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/f42e8b68/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 2901. Total energy = 1351.1381 kcal/mol (1348.8527 without restraints) Performing minimization step: 2902. Total energy = 1351.0700 kcal/mol (1348.7851 without restraints) Performing minimization step: 2903. Total energy = 1351.0017 kcal/mol (1348.7172 without restraints) Performing minimization step: 2904. Total energy = 1350.9335 kcal/mol (1348.6496 without restraints) Performing minimization step: 2905. Total energy = 1350.8650 kcal/mol (1348.5816 without restraints) Performing minimization step: 2906. Total energy = 1350.7968 kcal/mol (1348.5138 without restraints) Performing minimization step: 2907. Total energy = 1350.7287 kcal/mol (1348.4463 without restraints) Performing minimization step: 2908. Total energy = 1350.6605 kcal/mol (1348.3786 without restraints) Performing minimization step: 2909. Total energy = 1350.5920 kcal/mol (1348.3105 without restraints) Performing minimization step: 2910. Total energy = 1350.5242 kcal/mol (1348.2433 without restraints) Performing minimization step: 2911. Total energy = 1350.4563 kcal/mol (1348.1759 without restraints) Performing minimization step: 2912. Total energy = 1350.3884 kcal/mol (1348.1085 without restraints) Performing minimization step: 2913. Total energy = 1350.3206 kcal/mol (1348.0412 without restraints) Performing minimization step: 2914. Total energy = 1350.2528 kcal/mol (1347.9738 without restraints) Performing minimization step: 2915. Total energy = 1350.1852 kcal/mol (1347.9067 without restraints) Performing minimization step: 2916. Total energy = 1350.1174 kcal/mol (1347.8395 without restraints) Performing minimization step: 2917. Total energy = 1350.0497 kcal/mol (1347.7723 without restraints) Performing minimization step: 2918. Total energy = 1349.9820 kcal/mol (1347.7051 without restraints) Performing minimization step: 2919. Total energy = 1349.9144 kcal/mol (1347.6379 without restraints) Performing minimization step: 2920. Total energy = 1349.8466 kcal/mol (1347.5706 without restraints) Performing minimization step: 2921. Total energy = 1349.7789 kcal/mol (1347.5034 without restraints) Performing minimization step: 2922. Total energy = 1349.7111 kcal/mol (1347.4361 without restraints) Performing minimization step: 2923. Total energy = 1349.6438 kcal/mol (1347.3693 without restraints) Performing minimization step: 2924. Total energy = 1349.5763 kcal/mol (1347.3023 without restraints) Performing minimization step: 2925. Total energy = 1349.5087 kcal/mol (1347.2352 without restraints) Performing minimization step: 2926. Total energy = 1349.4413 kcal/mol (1347.1682 without restraints) Performing minimization step: 2927. Total energy = 1349.3738 kcal/mol (1347.1013 without restraints) Performing minimization step: 2928. Total energy = 1349.3065 kcal/mol (1347.0344 without restraints) Performing minimization step: 2929. Total energy = 1349.2394 kcal/mol (1346.9678 without restraints) Performing minimization step: 2930. Total energy = 1349.1721 kcal/mol (1346.9010 without restraints) Performing minimization step: 2931. Total energy = 1349.1048 kcal/mol (1346.8342 without restraints) Performing minimization step: 2932. Total energy = 1349.0376 kcal/mol (1346.7675 without restraints) Performing minimization step: 2933. Total energy = 1348.9704 kcal/mol (1346.7008 without restraints) Performing minimization step: 2934. Total energy = 1348.9035 kcal/mol (1346.6344 without restraints) Performing minimization step: 2935. Total energy = 1348.8366 kcal/mol (1346.5679 without restraints) Performing minimization step: 2936. Total energy = 1348.7695 kcal/mol (1346.5013 without restraints) Performing minimization step: 2937. Total energy = 1348.7024 kcal/mol (1346.4348 without restraints) Performing minimization step: 2938. Total energy = 1348.6354 kcal/mol (1346.3683 without restraints) Performing minimization step: 2939. Total energy = 1348.5684 kcal/mol (1346.3017 without restraints) Performing minimization step: 2940. Total energy = 1348.5015 kcal/mol (1346.2353 without restraints) Performing minimization step: 2941. Total energy = 1348.4348 kcal/mol (1346.1691 without restraints) Performing minimization step: 2942. Total energy = 1348.3678 kcal/mol (1346.1025 without restraints) Performing minimization step: 2943. Total energy = 1348.3007 kcal/mol (1346.0359 without restraints) Performing minimization step: 2944. Total energy = 1348.2341 kcal/mol (1345.9698 without restraints) Performing minimization step: 2945. Total energy = 1348.1672 kcal/mol (1345.9034 without restraints) Performing minimization step: 2946. Total energy = 1348.1003 kcal/mol (1345.8371 without restraints) Performing minimization step: 2947. Total energy = 1348.0336 kcal/mol (1345.7708 without restraints) Performing minimization step: 2948. Total energy = 1347.9669 kcal/mol (1345.7046 without restraints) Performing minimization step: 2949. Total energy = 1347.9000 kcal/mol (1345.6382 without restraints) Performing minimization step: 2950. Total energy = 1347.8334 kcal/mol (1345.5721 without restraints) Performing minimization step: 2951. Total energy = 1347.7668 kcal/mol (1345.5060 without restraints) Performing minimization step: 2952. Total energy = 1347.7003 kcal/mol (1345.4399 without restraints) Performing minimization step: 2953. Total energy = 1347.6339 kcal/mol (1345.3740 without restraints) Performing minimization step: 2954. Total energy = 1347.5674 kcal/mol (1345.3080 without restraints) Performing minimization step: 2955. Total energy = 1347.5011 kcal/mol (1345.2423 without restraints) Performing minimization step: 2956. Total energy = 1347.4347 kcal/mol (1345.1763 without restraints) Performing minimization step: 2957. Total energy = 1347.3684 kcal/mol (1345.1104 without restraints) Performing minimization step: 2958. Total energy = 1347.3020 kcal/mol (1345.0445 without restraints) Performing minimization step: 2959. Total energy = 1347.2357 kcal/mol (1344.9787 without restraints) Performing minimization step: 2960. Total energy = 1347.1694 kcal/mol (1344.9129 without restraints) Performing minimization step: 2961. Total energy = 1347.1030 kcal/mol (1344.8470 without restraints) Performing minimization step: 2962. Total energy = 1347.0368 kcal/mol (1344.7812 without restraints) Performing minimization step: 2963. Total energy = 1346.9706 kcal/mol (1344.7155 without restraints) Performing minimization step: 2964. Total energy = 1346.9045 kcal/mol (1344.6499 without restraints) Performing minimization step: 2965. Total energy = 1346.8381 kcal/mol (1344.5840 without restraints) Performing minimization step: 2966. Total energy = 1346.7720 kcal/mol (1344.5184 without restraints) Performing minimization step: 2967. Total energy = 1346.7060 kcal/mol (1344.4528 without restraints) Performing minimization step: 2968. Total energy = 1346.6400 kcal/mol (1344.3873 without restraints) Performing minimization step: 2969. Total energy = 1346.5740 kcal/mol (1344.3218 without restraints) Performing minimization step: 2970. Total energy = 1346.5081 kcal/mol (1344.2563 without restraints) Performing minimization step: 2971. Total energy = 1346.4421 kcal/mol (1344.1909 without restraints) Performing minimization step: 2972. Total energy = 1346.3763 kcal/mol (1344.1255 without restraints) Performing minimization step: 2973. Total energy = 1346.3104 kcal/mol (1344.0601 without restraints) Performing minimization step: 2974. Total energy = 1346.2441 kcal/mol (1343.9942 without restraints) Performing minimization step: 2975. Total energy = 1346.1783 kcal/mol (1343.9290 without restraints) Performing minimization step: 2976. Total energy = 1346.1123 kcal/mol (1343.8635 without restraints) Performing minimization step: 2977. Total energy = 1346.0466 kcal/mol (1343.7982 without restraints) Performing minimization step: 2978. Total energy = 1345.9811 kcal/mol (1343.7331 without restraints) Performing minimization step: 2979. Total energy = 1345.9154 kcal/mol (1343.6679 without restraints) Performing minimization step: 2980. Total energy = 1345.8503 kcal/mol (1343.6033 without restraints) Performing minimization step: 2981. Total energy = 1345.7847 kcal/mol (1343.5381 without restraints) Performing minimization step: 2982. Total energy = 1345.7191 kcal/mol (1343.4731 without restraints) Performing minimization step: 2983. Total energy = 1345.6535 kcal/mol (1343.4080 without restraints) Performing minimization step: 2984. Total energy = 1345.5880 kcal/mol (1343.3429 without restraints) Performing minimization step: 2985. Total energy = 1345.5219 kcal/mol (1343.2772 without restraints) Performing minimization step: 2986. Total energy = 1345.4564 kcal/mol (1343.2122 without restraints) Performing minimization step: 2987. Total energy = 1345.3910 kcal/mol (1343.1473 without restraints) Performing minimization step: 2988. Total energy = 1345.3256 kcal/mol (1343.0824 without restraints) Performing minimization step: 2989. Total energy = 1345.2603 kcal/mol (1343.0175 without restraints) Performing minimization step: 2990. Total energy = 1345.1946 kcal/mol (1342.9523 without restraints) Performing minimization step: 2991. Total energy = 1345.1295 kcal/mol (1342.8877 without restraints) Performing minimization step: 2992. Total energy = 1345.0641 kcal/mol (1342.8227 without restraints) Performing minimization step: 2993. Total energy = 1344.9989 kcal/mol (1342.7580 without restraints) Performing minimization step: 2994. Total energy = 1344.9337 kcal/mol (1342.6933 without restraints) Performing minimization step: 2995. Total energy = 1344.8688 kcal/mol (1342.6289 without restraints) Performing minimization step: 2996. Total energy = 1344.8040 kcal/mol (1342.5647 without restraints) Performing minimization step: 2997. Total energy = 1344.7391 kcal/mol (1342.5002 without restraints) Performing minimization step: 2998. Total energy = 1344.6742 kcal/mol (1342.4357 without restraints) Performing minimization step: 2999. Total energy = 1344.6092 kcal/mol (1342.3711 without restraints) Performing minimization step: 3000. Total energy = 1344.5442 kcal/mol (1342.3066 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/f42e8b68/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 3001. Total energy = 1344.4793 kcal/mol (1342.2422 without restraints) Performing minimization step: 3002. Total energy = 1344.4144 kcal/mol (1342.1777 without restraints) Performing minimization step: 3003. Total energy = 1344.3495 kcal/mol (1342.1133 without restraints) Performing minimization step: 3004. Total energy = 1344.2845 kcal/mol (1342.0488 without restraints) Performing minimization step: 3005. Total energy = 1344.2197 kcal/mol (1341.9844 without restraints) Performing minimization step: 3006. Total energy = 1344.1549 kcal/mol (1341.9201 without restraints) Performing minimization step: 3007. Total energy = 1344.0899 kcal/mol (1341.8556 without restraints) Performing minimization step: 3008. Total energy = 1344.0249 kcal/mol (1341.7911 without restraints) Performing minimization step: 3009. Total energy = 1343.9602 kcal/mol (1341.7268 without restraints) Performing minimization step: 3010. Total energy = 1343.8954 kcal/mol (1341.6624 without restraints) Performing minimization step: 3011. Total energy = 1343.8307 kcal/mol (1341.5982 without restraints) Performing minimization step: 3012. Total energy = 1343.7662 kcal/mol (1341.5341 without restraints) Performing minimization step: 3013. Total energy = 1343.7013 kcal/mol (1341.4698 without restraints) Performing minimization step: 3014. Total energy = 1343.6368 kcal/mol (1341.4057 without restraints) Performing minimization step: 3015. Total energy = 1343.5723 kcal/mol (1341.3417 without restraints) Performing minimization step: 3016. Total energy = 1343.5075 kcal/mol (1341.2772 without restraints) Performing minimization step: 3017. Total energy = 1343.4427 kcal/mol (1341.2130 without restraints) Performing minimization step: 3018. Total energy = 1343.3783 kcal/mol (1341.1491 without restraints) Performing minimization step: 3019. Total energy = 1343.3140 kcal/mol (1341.0852 without restraints) Performing minimization step: 3020. Total energy = 1343.2499 kcal/mol (1341.0216 without restraints) Performing minimization step: 3021. Total energy = 1343.1856 kcal/mol (1340.9577 without restraints) Performing minimization step: 3022. Total energy = 1343.1213 kcal/mol (1340.8939 without restraints) Performing minimization step: 3023. Total energy = 1343.0572 kcal/mol (1340.8303 without restraints) Performing minimization step: 3024. Total energy = 1342.9932 kcal/mol (1340.7668 without restraints) Performing minimization step: 3025. Total energy = 1342.9291 kcal/mol (1340.7031 without restraints) Performing minimization step: 3026. Total energy = 1342.8649 kcal/mol (1340.6393 without restraints) Performing minimization step: 3027. Total energy = 1342.8007 kcal/mol (1340.5756 without restraints) Performing minimization step: 3028. Total energy = 1342.7365 kcal/mol (1340.5120 without restraints) Performing minimization step: 3029. Total energy = 1342.6726 kcal/mol (1340.4484 without restraints) Performing minimization step: 3030. Total energy = 1342.6086 kcal/mol (1340.3848 without restraints) Performing minimization step: 3031. Total energy = 1342.5445 kcal/mol (1340.3212 without restraints) Performing minimization step: 3032. Total energy = 1342.4805 kcal/mol (1340.2577 without restraints) Performing minimization step: 3033. Total energy = 1342.4167 kcal/mol (1340.1943 without restraints) Performing minimization step: 3034. Total energy = 1342.3527 kcal/mol (1340.1308 without restraints) Performing minimization step: 3035. Total energy = 1342.2890 kcal/mol (1340.0676 without restraints) Performing minimization step: 3036. Total energy = 1342.2252 kcal/mol (1340.0043 without restraints) Performing minimization step: 3037. Total energy = 1342.1614 kcal/mol (1339.9409 without restraints) Performing minimization step: 3038. Total energy = 1342.0974 kcal/mol (1339.8773 without restraints) Performing minimization step: 3039. Total energy = 1342.0337 kcal/mol (1339.8141 without restraints) Performing minimization step: 3040. Total energy = 1341.9700 kcal/mol (1339.7508 without restraints) Performing minimization step: 3041. Total energy = 1341.9064 kcal/mol (1339.6877 without restraints) Performing minimization step: 3042. Total energy = 1341.8427 kcal/mol (1339.6245 without restraints) Performing minimization step: 3043. Total energy = 1341.7791 kcal/mol (1339.5614 without restraints) Performing minimization step: 3044. Total energy = 1341.7156 kcal/mol (1339.4982 without restraints) Performing minimization step: 3045. Total energy = 1341.6520 kcal/mol (1339.4351 without restraints) Performing minimization step: 3046. Total energy = 1341.5885 kcal/mol (1339.3720 without restraints) Performing minimization step: 3047. Total energy = 1341.5251 kcal/mol (1339.3093 without restraints) Performing minimization step: 3048. Total energy = 1341.4618 kcal/mol (1339.2463 without restraints) Performing minimization step: 3049. Total energy = 1341.3984 kcal/mol (1339.1833 without restraints) Performing minimization step: 3050. Total energy = 1341.3350 kcal/mol (1339.1204 without restraints) Performing minimization step: 3051. Total energy = 1341.2717 kcal/mol (1339.0575 without restraints) Performing minimization step: 3052. Total energy = 1341.2084 kcal/mol (1338.9946 without restraints) Performing minimization step: 3053. Total energy = 1341.1450 kcal/mol (1338.9318 without restraints) Performing minimization step: 3054. Total energy = 1341.0818 kcal/mol (1338.8689 without restraints) Performing minimization step: 3055. Total energy = 1341.0186 kcal/mol (1338.8062 without restraints) Performing minimization step: 3056. Total energy = 1340.9553 kcal/mol (1338.7434 without restraints) Performing minimization step: 3057. Total energy = 1340.8922 kcal/mol (1338.6807 without restraints) Performing minimization step: 3058. Total energy = 1340.8290 kcal/mol (1338.6180 without restraints) Performing minimization step: 3059. Total energy = 1340.7659 kcal/mol (1338.5554 without restraints) Performing minimization step: 3060. Total energy = 1340.7029 kcal/mol (1338.4928 without restraints) Performing minimization step: 3061. Total energy = 1340.6399 kcal/mol (1338.4302 without restraints) Performing minimization step: 3062. Total energy = 1340.5768 kcal/mol (1338.3676 without restraints) Performing minimization step: 3063. Total energy = 1340.5135 kcal/mol (1338.3047 without restraints) Performing minimization step: 3064. Total energy = 1340.4503 kcal/mol (1338.2419 without restraints) Performing minimization step: 3065. Total energy = 1340.3873 kcal/mol (1338.1794 without restraints) Performing minimization step: 3066. Total energy = 1340.3244 kcal/mol (1338.1169 without restraints) Performing minimization step: 3067. Total energy = 1340.2613 kcal/mol (1338.0543 without restraints) Performing minimization step: 3068. Total energy = 1340.1985 kcal/mol (1337.9919 without restraints) Performing minimization step: 3069. Total energy = 1340.1354 kcal/mol (1337.9293 without restraints) Performing minimization step: 3070. Total energy = 1340.0726 kcal/mol (1337.8670 without restraints) Performing minimization step: 3071. Total energy = 1340.0099 kcal/mol (1337.8046 without restraints) Performing minimization step: 3072. Total energy = 1339.9471 kcal/mol (1337.7424 without restraints) Performing minimization step: 3073. Total energy = 1339.8849 kcal/mol (1337.6805 without restraints) Performing minimization step: 3074. Total energy = 1339.8222 kcal/mol (1337.6183 without restraints) Performing minimization step: 3075. Total energy = 1339.7597 kcal/mol (1337.5563 without restraints) Performing minimization step: 3076. Total energy = 1339.6971 kcal/mol (1337.4941 without restraints) Performing minimization step: 3077. Total energy = 1339.6349 kcal/mol (1337.4322 without restraints) Performing minimization step: 3078. Total energy = 1339.5723 kcal/mol (1337.3702 without restraints) Performing minimization step: 3079. Total energy = 1339.5099 kcal/mol (1337.3083 without restraints) Performing minimization step: 3080. Total energy = 1339.4474 kcal/mol (1337.2462 without restraints) Performing minimization step: 3081. Total energy = 1339.3850 kcal/mol (1337.1842 without restraints) Performing minimization step: 3082. Total energy = 1339.3227 kcal/mol (1337.1224 without restraints) Performing minimization step: 3083. Total energy = 1339.2604 kcal/mol (1337.0605 without restraints) Performing minimization step: 3084. Total energy = 1339.1980 kcal/mol (1336.9985 without restraints) Performing minimization step: 3085. Total energy = 1339.1357 kcal/mol (1336.9366 without restraints) Performing minimization step: 3086. Total energy = 1339.0733 kcal/mol (1336.8748 without restraints) Performing minimization step: 3087. Total energy = 1339.0109 kcal/mol (1336.8127 without restraints) Performing minimization step: 3088. Total energy = 1338.9486 kcal/mol (1336.7509 without restraints) Performing minimization step: 3089. Total energy = 1338.8864 kcal/mol (1336.6891 without restraints) Performing minimization step: 3090. Total energy = 1338.8242 kcal/mol (1336.6274 without restraints) Performing minimization step: 3091. Total energy = 1338.7620 kcal/mol (1336.5657 without restraints) Performing minimization step: 3092. Total energy = 1338.7004 kcal/mol (1336.5044 without restraints) Performing minimization step: 3093. Total energy = 1338.6382 kcal/mol (1336.4427 without restraints) Performing minimization step: 3094. Total energy = 1338.5759 kcal/mol (1336.3809 without restraints) Performing minimization step: 3095. Total energy = 1338.5139 kcal/mol (1336.3193 without restraints) Performing minimization step: 3096. Total energy = 1338.4519 kcal/mol (1336.2577 without restraints) Performing minimization step: 3097. Total energy = 1338.3899 kcal/mol (1336.1961 without restraints) Performing minimization step: 3098. Total energy = 1338.3279 kcal/mol (1336.1346 without restraints) Performing minimization step: 3099. Total energy = 1338.2658 kcal/mol (1336.0729 without restraints) Performing minimization step: 3100. Total energy = 1338.2039 kcal/mol (1336.0114 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/f42e8b68/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 3101. Total energy = 1338.1420 kcal/mol (1335.9500 without restraints) Performing minimization step: 3102. Total energy = 1338.0802 kcal/mol (1335.8886 without restraints) Performing minimization step: 3103. Total energy = 1338.0182 kcal/mol (1335.8271 without restraints) Performing minimization step: 3104. Total energy = 1337.9564 kcal/mol (1335.7657 without restraints) Performing minimization step: 3105. Total energy = 1337.8947 kcal/mol (1335.7044 without restraints) Performing minimization step: 3106. Total energy = 1337.8327 kcal/mol (1335.6429 without restraints) Performing minimization step: 3107. Total energy = 1337.7711 kcal/mol (1335.5816 without restraints) Performing minimization step: 3108. Total energy = 1337.7092 kcal/mol (1335.5202 without restraints) Performing minimization step: 3109. Total energy = 1337.6473 kcal/mol (1335.4587 without restraints) Performing minimization step: 3110. Total energy = 1337.5857 kcal/mol (1335.3976 without restraints) Performing minimization step: 3111. Total energy = 1337.5242 kcal/mol (1335.3366 without restraints) Performing minimization step: 3112. Total energy = 1337.4629 kcal/mol (1335.2756 without restraints) Performing minimization step: 3113. Total energy = 1337.4013 kcal/mol (1335.2145 without restraints) Performing minimization step: 3114. Total energy = 1337.3399 kcal/mol (1335.1535 without restraints) Performing minimization step: 3115. Total energy = 1337.2784 kcal/mol (1335.0924 without restraints) Performing minimization step: 3116. Total energy = 1337.2169 kcal/mol (1335.0314 without restraints) Performing minimization step: 3117. Total energy = 1337.1554 kcal/mol (1334.9702 without restraints) Performing minimization step: 3118. Total energy = 1337.0939 kcal/mol (1334.9092 without restraints) Performing minimization step: 3119. Total energy = 1337.0325 kcal/mol (1334.8483 without restraints) Performing minimization step: 3120. Total energy = 1336.9711 kcal/mol (1334.7871 without restraints) Performing minimization step: 3121. Total energy = 1336.9096 kcal/mol (1334.7262 without restraints) Performing minimization step: 3122. Total energy = 1336.8485 kcal/mol (1334.6657 without restraints) Performing minimization step: 3123. Total energy = 1336.7876 kcal/mol (1334.6050 without restraints) Performing minimization step: 3124. Total energy = 1336.7264 kcal/mol (1334.5443 without restraints) Performing minimization step: 3125. Total energy = 1336.6654 kcal/mol (1334.4837 without restraints) Performing minimization step: 3126. Total energy = 1336.6042 kcal/mol (1334.4229 without restraints) Performing minimization step: 3127. Total energy = 1336.5433 kcal/mol (1334.3625 without restraints) Performing minimization step: 3128. Total energy = 1336.4822 kcal/mol (1334.3018 without restraints) Performing minimization step: 3129. Total energy = 1336.4209 kcal/mol (1334.2410 without restraints) Performing minimization step: 3130. Total energy = 1336.3596 kcal/mol (1334.1800 without restraints) Performing minimization step: 3131. Total energy = 1336.2989 kcal/mol (1334.1199 without restraints) Performing minimization step: 3132. Total energy = 1336.2380 kcal/mol (1334.0593 without restraints) Performing minimization step: 3133. Total energy = 1336.1766 kcal/mol (1333.9983 without restraints) Performing minimization step: 3134. Total energy = 1336.1157 kcal/mol (1333.9378 without restraints) Performing minimization step: 3135. Total energy = 1336.0548 kcal/mol (1333.8774 without restraints) Performing minimization step: 3136. Total energy = 1335.9936 kcal/mol (1333.8166 without restraints) Performing minimization step: 3137. Total energy = 1335.9328 kcal/mol (1333.7562 without restraints) Performing minimization step: 3138. Total energy = 1335.8721 kcal/mol (1333.6960 without restraints) Performing minimization step: 3139. Total energy = 1335.8111 kcal/mol (1333.6354 without restraints) Performing minimization step: 3140. Total energy = 1335.7505 kcal/mol (1333.5753 without restraints) Performing minimization step: 3141. Total energy = 1335.6898 kcal/mol (1333.5149 without restraints) Performing minimization step: 3142. Total energy = 1335.6291 kcal/mol (1333.4546 without restraints) Performing minimization step: 3143. Total energy = 1335.5684 kcal/mol (1333.3943 without restraints) Performing minimization step: 3144. Total energy = 1335.5077 kcal/mol (1333.3341 without restraints) Performing minimization step: 3145. Total energy = 1335.4470 kcal/mol (1333.2738 without restraints) Performing minimization step: 3146. Total energy = 1335.3864 kcal/mol (1333.2136 without restraints) Performing minimization step: 3147. Total energy = 1335.3257 kcal/mol (1333.1533 without restraints) Performing minimization step: 3148. Total energy = 1335.2649 kcal/mol (1333.0930 without restraints) Performing minimization step: 3149. Total energy = 1335.2044 kcal/mol (1333.0329 without restraints) Performing minimization step: 3150. Total energy = 1335.1439 kcal/mol (1332.9728 without restraints) Performing minimization step: 3151. Total energy = 1335.0834 kcal/mol (1332.9127 without restraints) Performing minimization step: 3152. Total energy = 1335.0229 kcal/mol (1332.8526 without restraints) Performing minimization step: 3153. Total energy = 1334.9622 kcal/mol (1332.7924 without restraints) Performing minimization step: 3154. Total energy = 1334.9018 kcal/mol (1332.7324 without restraints) Performing minimization step: 3155. Total energy = 1334.8416 kcal/mol (1332.6725 without restraints) Performing minimization step: 3156. Total energy = 1334.7811 kcal/mol (1332.6125 without restraints) Performing minimization step: 3157. Total energy = 1334.7215 kcal/mol (1332.5533 without restraints) Performing minimization step: 3158. Total energy = 1334.6612 kcal/mol (1332.4934 without restraints) Performing minimization step: 3159. Total energy = 1334.6009 kcal/mol (1332.4336 without restraints) Performing minimization step: 3160. Total energy = 1334.5406 kcal/mol (1332.3737 without restraints) Performing minimization step: 3161. Total energy = 1334.4804 kcal/mol (1332.3139 without restraints) Performing minimization step: 3162. Total energy = 1334.4202 kcal/mol (1332.2541 without restraints) Performing minimization step: 3163. Total energy = 1334.3600 kcal/mol (1332.1943 without restraints) Performing minimization step: 3164. Total energy = 1334.2997 kcal/mol (1332.1344 without restraints) Performing minimization step: 3165. Total energy = 1334.2396 kcal/mol (1332.0747 without restraints) Performing minimization step: 3166. Total energy = 1334.1795 kcal/mol (1332.0150 without restraints) Performing minimization step: 3167. Total energy = 1334.1196 kcal/mol (1331.9556 without restraints) Performing minimization step: 3168. Total energy = 1334.0596 kcal/mol (1331.8960 without restraints) Performing minimization step: 3169. Total energy = 1333.9996 kcal/mol (1331.8364 without restraints) Performing minimization step: 3170. Total energy = 1333.9396 kcal/mol (1331.7768 without restraints) Performing minimization step: 3171. Total energy = 1333.8799 kcal/mol (1331.7175 without restraints) Performing minimization step: 3172. Total energy = 1333.8198 kcal/mol (1331.6578 without restraints) Performing minimization step: 3173. Total energy = 1333.7596 kcal/mol (1331.5981 without restraints) Performing minimization step: 3174. Total energy = 1333.6997 kcal/mol (1331.5386 without restraints) Performing minimization step: 3175. Total energy = 1333.6399 kcal/mol (1331.4791 without restraints) Performing minimization step: 3176. Total energy = 1333.5801 kcal/mol (1331.4198 without restraints) Performing minimization step: 3177. Total energy = 1333.5203 kcal/mol (1331.3604 without restraints) Performing minimization step: 3178. Total energy = 1333.4603 kcal/mol (1331.3008 without restraints) Performing minimization step: 3179. Total energy = 1333.4006 kcal/mol (1331.2415 without restraints) Performing minimization step: 3180. Total energy = 1333.3406 kcal/mol (1331.1819 without restraints) Performing minimization step: 3181. Total energy = 1333.2809 kcal/mol (1331.1226 without restraints) Performing minimization step: 3182. Total energy = 1333.2210 kcal/mol (1331.0631 without restraints) Performing minimization step: 3183. Total energy = 1333.1615 kcal/mol (1331.0041 without restraints) Performing minimization step: 3184. Total energy = 1333.1019 kcal/mol (1330.9449 without restraints) Performing minimization step: 3185. Total energy = 1333.0421 kcal/mol (1330.8855 without restraints) Performing minimization step: 3186. Total energy = 1332.9828 kcal/mol (1330.8266 without restraints) Performing minimization step: 3187. Total energy = 1332.9232 kcal/mol (1330.7674 without restraints) Performing minimization step: 3188. Total energy = 1332.8637 kcal/mol (1330.7083 without restraints) Performing minimization step: 3189. Total energy = 1332.8042 kcal/mol (1330.6492 without restraints) Performing minimization step: 3190. Total energy = 1332.7446 kcal/mol (1330.5900 without restraints) Performing minimization step: 3191. Total energy = 1332.6852 kcal/mol (1330.5310 without restraints) Performing minimization step: 3192. Total energy = 1332.6259 kcal/mol (1330.4721 without restraints) Performing minimization step: 3193. Total energy = 1332.5667 kcal/mol (1330.4133 without restraints) Performing minimization step: 3194. Total energy = 1332.5074 kcal/mol (1330.3544 without restraints) Performing minimization step: 3195. Total energy = 1332.4480 kcal/mol (1330.2954 without restraints) Performing minimization step: 3196. Total energy = 1332.3884 kcal/mol (1330.2362 without restraints) Performing minimization step: 3197. Total energy = 1332.3291 kcal/mol (1330.1773 without restraints) Performing minimization step: 3198. Total energy = 1332.2696 kcal/mol (1330.1182 without restraints) Performing minimization step: 3199. Total energy = 1332.2104 kcal/mol (1330.0594 without restraints) Performing minimization step: 3200. Total energy = 1332.1512 kcal/mol (1330.0006 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/f42e8b68/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 3201. Total energy = 1332.0920 kcal/mol (1329.9418 without restraints) Performing minimization step: 3202. Total energy = 1332.0328 kcal/mol (1329.8830 without restraints) Performing minimization step: 3203. Total energy = 1331.9734 kcal/mol (1329.8241 without restraints) Performing minimization step: 3204. Total energy = 1331.9146 kcal/mol (1329.7657 without restraints) Performing minimization step: 3205. Total energy = 1331.8555 kcal/mol (1329.7070 without restraints) Performing minimization step: 3206. Total energy = 1331.7959 kcal/mol (1329.6477 without restraints) Performing minimization step: 3207. Total energy = 1331.7368 kcal/mol (1329.5890 without restraints) Performing minimization step: 3208. Total energy = 1331.6777 kcal/mol (1329.5304 without restraints) Performing minimization step: 3209. Total energy = 1331.6188 kcal/mol (1329.4719 without restraints) Performing minimization step: 3210. Total energy = 1331.5598 kcal/mol (1329.4133 without restraints) Performing minimization step: 3211. Total energy = 1331.5009 kcal/mol (1329.3547 without restraints) Performing minimization step: 3212. Total energy = 1331.4419 kcal/mol (1329.2961 without restraints) Performing minimization step: 3213. Total energy = 1331.3830 kcal/mol (1329.2376 without restraints) Performing minimization step: 3214. Total energy = 1331.3241 kcal/mol (1329.1791 without restraints) Performing minimization step: 3215. Total energy = 1331.2652 kcal/mol (1329.1206 without restraints) Performing minimization step: 3216. Total energy = 1331.2063 kcal/mol (1329.0621 without restraints) Performing minimization step: 3217. Total energy = 1331.1475 kcal/mol (1329.0037 without restraints) Performing minimization step: 3218. Total energy = 1331.0886 kcal/mol (1328.9451 without restraints) Performing minimization step: 3219. Total energy = 1331.0297 kcal/mol (1328.8867 without restraints) Performing minimization step: 3220. Total energy = 1330.9709 kcal/mol (1328.8283 without restraints) Performing minimization step: 3221. Total energy = 1330.9122 kcal/mol (1328.7700 without restraints) Performing minimization step: 3222. Total energy = 1330.8534 kcal/mol (1328.7117 without restraints) Performing minimization step: 3223. Total energy = 1330.7943 kcal/mol (1328.6529 without restraints) Performing minimization step: 3224. Total energy = 1330.7354 kcal/mol (1328.5944 without restraints) Performing minimization step: 3225. Total energy = 1330.6770 kcal/mol (1328.5364 without restraints) Performing minimization step: 3226. Total energy = 1330.6186 kcal/mol (1328.4784 without restraints) Performing minimization step: 3227. Total energy = 1330.5600 kcal/mol (1328.4202 without restraints) Performing minimization step: 3228. Total energy = 1330.5014 kcal/mol (1328.3620 without restraints) Performing minimization step: 3229. Total energy = 1330.4429 kcal/mol (1328.3040 without restraints) Performing minimization step: 3230. Total energy = 1330.3845 kcal/mol (1328.2458 without restraints) Performing minimization step: 3231. Total energy = 1330.3260 kcal/mol (1328.1877 without restraints) Performing minimization step: 3232. Total energy = 1330.2675 kcal/mol (1328.1296 without restraints) Performing minimization step: 3233. Total energy = 1330.2090 kcal/mol (1328.0715 without restraints) Performing minimization step: 3234. Total energy = 1330.1506 kcal/mol (1328.0135 without restraints) Performing minimization step: 3235. Total energy = 1330.0921 kcal/mol (1327.9555 without restraints) Performing minimization step: 3236. Total energy = 1330.0335 kcal/mol (1327.8973 without restraints) Performing minimization step: 3237. Total energy = 1329.9751 kcal/mol (1327.8392 without restraints) Performing minimization step: 3238. Total energy = 1329.9168 kcal/mol (1327.7813 without restraints) Performing minimization step: 3239. Total energy = 1329.8585 kcal/mol (1327.7233 without restraints) Performing minimization step: 3240. Total energy = 1329.8004 kcal/mol (1327.6657 without restraints) Performing minimization step: 3241. Total energy = 1329.7421 kcal/mol (1327.6078 without restraints) Performing minimization step: 3242. Total energy = 1329.6839 kcal/mol (1327.5499 without restraints) Performing minimization step: 3243. Total energy = 1329.6256 kcal/mol (1327.4921 without restraints) Performing minimization step: 3244. Total energy = 1329.5676 kcal/mol (1327.4344 without restraints) Performing minimization step: 3245. Total energy = 1329.5093 kcal/mol (1327.3765 without restraints) Performing minimization step: 3246. Total energy = 1329.4508 kcal/mol (1327.3184 without restraints) Performing minimization step: 3247. Total energy = 1329.3927 kcal/mol (1327.2607 without restraints) Performing minimization step: 3248. Total energy = 1329.3346 kcal/mol (1327.2029 without restraints) Performing minimization step: 3249. Total energy = 1329.2765 kcal/mol (1327.1452 without restraints) Performing minimization step: 3250. Total energy = 1329.2184 kcal/mol (1327.0876 without restraints) Performing minimization step: 3251. Total energy = 1329.1603 kcal/mol (1327.0299 without restraints) Performing minimization step: 3252. Total energy = 1329.1023 kcal/mol (1326.9722 without restraints) Performing minimization step: 3253. Total energy = 1329.0443 kcal/mol (1326.9146 without restraints) Performing minimization step: 3254. Total energy = 1328.9863 kcal/mol (1326.8570 without restraints) Performing minimization step: 3255. Total energy = 1328.9285 kcal/mol (1326.7996 without restraints) Performing minimization step: 3256. Total energy = 1328.8706 kcal/mol (1326.7421 without restraints) Performing minimization step: 3257. Total energy = 1328.8126 kcal/mol (1326.6845 without restraints) Performing minimization step: 3258. Total energy = 1328.7548 kcal/mol (1326.6271 without restraints) Performing minimization step: 3259. Total energy = 1328.6969 kcal/mol (1326.5695 without restraints) Performing minimization step: 3260. Total energy = 1328.6390 kcal/mol (1326.5120 without restraints) Performing minimization step: 3261. Total energy = 1328.5811 kcal/mol (1326.4545 without restraints) Performing minimization step: 3262. Total energy = 1328.5233 kcal/mol (1326.3971 without restraints) Performing minimization step: 3263. Total energy = 1328.4656 kcal/mol (1326.3397 without restraints) Performing minimization step: 3264. Total energy = 1328.4078 kcal/mol (1326.2823 without restraints) Performing minimization step: 3265. Total energy = 1328.3501 kcal/mol (1326.2250 without restraints) Performing minimization step: 3266. Total energy = 1328.2920 kcal/mol (1326.1673 without restraints) Performing minimization step: 3267. Total energy = 1328.2343 kcal/mol (1326.1100 without restraints) Performing minimization step: 3268. Total energy = 1328.1766 kcal/mol (1326.0527 without restraints) Performing minimization step: 3269. Total energy = 1328.1189 kcal/mol (1325.9954 without restraints) Performing minimization step: 3270. Total energy = 1328.0611 kcal/mol (1325.9380 without restraints) Performing minimization step: 3271. Total energy = 1328.0037 kcal/mol (1325.8809 without restraints) Performing minimization step: 3272. Total energy = 1327.9461 kcal/mol (1325.8237 without restraints) Performing minimization step: 3273. Total energy = 1327.8885 kcal/mol (1325.7665 without restraints) Performing minimization step: 3274. Total energy = 1327.8309 kcal/mol (1325.7092 without restraints) Performing minimization step: 3275. Total energy = 1327.7734 kcal/mol (1325.6521 without restraints) Performing minimization step: 3276. Total energy = 1327.7159 kcal/mol (1325.5950 without restraints) Performing minimization step: 3277. Total energy = 1327.6584 kcal/mol (1325.5379 without restraints) Performing minimization step: 3278. Total energy = 1327.6009 kcal/mol (1325.4808 without restraints) Performing minimization step: 3279. Total energy = 1327.5435 kcal/mol (1325.4237 without restraints) Performing minimization step: 3280. Total energy = 1327.4861 kcal/mol (1325.3667 without restraints) Performing minimization step: 3281. Total energy = 1327.4287 kcal/mol (1325.3097 without restraints) Performing minimization step: 3282. Total energy = 1327.3713 kcal/mol (1325.2527 without restraints) Performing minimization step: 3283. Total energy = 1327.3140 kcal/mol (1325.1957 without restraints) Performing minimization step: 3284. Total energy = 1327.2566 kcal/mol (1325.1387 without restraints) Performing minimization step: 3285. Total energy = 1327.1996 kcal/mol (1325.0821 without restraints) Performing minimization step: 3286. Total energy = 1327.1425 kcal/mol (1325.0253 without restraints) Performing minimization step: 3287. Total energy = 1327.0853 kcal/mol (1324.9685 without restraints) Performing minimization step: 3288. Total energy = 1327.0281 kcal/mol (1324.9117 without restraints) Performing minimization step: 3289. Total energy = 1326.9710 kcal/mol (1324.8550 without restraints) Performing minimization step: 3290. Total energy = 1326.9138 kcal/mol (1324.7982 without restraints) Performing minimization step: 3291. Total energy = 1326.8570 kcal/mol (1324.7417 without restraints) Performing minimization step: 3292. Total energy = 1326.7998 kcal/mol (1324.6849 without restraints) Performing minimization step: 3293. Total energy = 1326.7426 kcal/mol (1324.6281 without restraints) Performing minimization step: 3294. Total energy = 1326.6857 kcal/mol (1324.5715 without restraints) Performing minimization step: 3295. Total energy = 1326.6286 kcal/mol (1324.5148 without restraints) Performing minimization step: 3296. Total energy = 1326.5715 kcal/mol (1324.4581 without restraints) Performing minimization step: 3297. Total energy = 1326.5144 kcal/mol (1324.4014 without restraints) Performing minimization step: 3298. Total energy = 1326.4574 kcal/mol (1324.3447 without restraints) Performing minimization step: 3299. Total energy = 1326.4003 kcal/mol (1324.2880 without restraints) Performing minimization step: 3300. Total energy = 1326.3433 kcal/mol (1324.2314 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/f42e8b68/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 3301. Total energy = 1326.2865 kcal/mol (1324.1749 without restraints) Performing minimization step: 3302. Total energy = 1326.2295 kcal/mol (1324.1183 without restraints) Performing minimization step: 3303. Total energy = 1326.1726 kcal/mol (1324.0618 without restraints) Performing minimization step: 3304. Total energy = 1326.1158 kcal/mol (1324.0054 without restraints) Performing minimization step: 3305. Total energy = 1326.0590 kcal/mol (1323.9489 without restraints) Performing minimization step: 3306. Total energy = 1326.0021 kcal/mol (1323.8924 without restraints) Performing minimization step: 3307. Total energy = 1325.9452 kcal/mol (1323.8359 without restraints) Performing minimization step: 3308. Total energy = 1325.8883 kcal/mol (1323.7793 without restraints) Performing minimization step: 3309. Total energy = 1325.8315 kcal/mol (1323.7229 without restraints) Performing minimization step: 3310. Total energy = 1325.7747 kcal/mol (1323.6665 without restraints) Performing minimization step: 3311. Total energy = 1325.7180 kcal/mol (1323.6101 without restraints) Performing minimization step: 3312. Total energy = 1325.6615 kcal/mol (1323.5540 without restraints) Performing minimization step: 3313. Total energy = 1325.6048 kcal/mol (1323.4976 without restraints) Performing minimization step: 3314. Total energy = 1325.5482 kcal/mol (1323.4415 without restraints) Performing minimization step: 3315. Total energy = 1325.4913 kcal/mol (1323.3849 without restraints) Performing minimization step: 3316. Total energy = 1325.4347 kcal/mol (1323.3286 without restraints) Performing minimization step: 3317. Total energy = 1325.3780 kcal/mol (1323.2724 without restraints) Performing minimization step: 3318. Total energy = 1325.3214 kcal/mol (1323.2161 without restraints) Performing minimization step: 3319. Total energy = 1325.2647 kcal/mol (1323.1598 without restraints) Performing minimization step: 3320. Total energy = 1325.2081 kcal/mol (1323.1035 without restraints) Performing minimization step: 3321. Total energy = 1325.1515 kcal/mol (1323.0473 without restraints) Performing minimization step: 3322. Total energy = 1325.0951 kcal/mol (1322.9913 without restraints) Performing minimization step: 3323. Total energy = 1325.0385 kcal/mol (1322.9350 without restraints) Performing minimization step: 3324. Total energy = 1324.9820 kcal/mol (1322.8788 without restraints) Performing minimization step: 3325. Total energy = 1324.9257 kcal/mol (1322.8230 without restraints) Performing minimization step: 3326. Total energy = 1324.8691 kcal/mol (1322.7667 without restraints) Performing minimization step: 3327. Total energy = 1324.8126 kcal/mol (1322.7105 without restraints) Performing minimization step: 3328. Total energy = 1324.7556 kcal/mol (1322.6539 without restraints) Performing minimization step: 3329. Total energy = 1324.6988 kcal/mol (1322.5975 without restraints) Performing minimization step: 3330. Total energy = 1324.6425 kcal/mol (1322.5415 without restraints) Performing minimization step: 3331. Total energy = 1324.5861 kcal/mol (1322.4855 without restraints) Performing minimization step: 3332. Total energy = 1324.5297 kcal/mol (1322.4295 without restraints) Performing minimization step: 3333. Total energy = 1324.4734 kcal/mol (1322.3735 without restraints) Performing minimization step: 3334. Total energy = 1324.4173 kcal/mol (1322.3177 without restraints) Performing minimization step: 3335. Total energy = 1324.3610 kcal/mol (1322.2618 without restraints) Performing minimization step: 3336. Total energy = 1324.3047 kcal/mol (1322.2059 without restraints) Performing minimization step: 3337. Total energy = 1324.2484 kcal/mol (1322.1500 without restraints) Performing minimization step: 3338. Total energy = 1324.1922 kcal/mol (1322.0941 without restraints) Performing minimization step: 3339. Total energy = 1324.1360 kcal/mol (1322.0383 without restraints) Performing minimization step: 3340. Total energy = 1324.0799 kcal/mol (1321.9826 without restraints) Performing minimization step: 3341. Total energy = 1324.0238 kcal/mol (1321.9268 without restraints) Performing minimization step: 3342. Total energy = 1323.9677 kcal/mol (1321.8711 without restraints) Performing minimization step: 3343. Total energy = 1323.9116 kcal/mol (1321.8153 without restraints) Performing minimization step: 3344. Total energy = 1323.8555 kcal/mol (1321.7595 without restraints) Performing minimization step: 3345. Total energy = 1323.7994 kcal/mol (1321.7038 without restraints) Performing minimization step: 3346. Total energy = 1323.7432 kcal/mol (1321.6480 without restraints) Performing minimization step: 3347. Total energy = 1323.6871 kcal/mol (1321.5923 without restraints) Performing minimization step: 3348. Total energy = 1323.6314 kcal/mol (1321.5369 without restraints) Performing minimization step: 3349. Total energy = 1323.5754 kcal/mol (1321.4812 without restraints) Performing minimization step: 3350. Total energy = 1323.5194 kcal/mol (1321.4255 without restraints) Performing minimization step: 3351. Total energy = 1323.4632 kcal/mol (1321.3697 without restraints) Performing minimization step: 3352. Total energy = 1323.4072 kcal/mol (1321.3141 without restraints) Performing minimization step: 3353. Total energy = 1323.3513 kcal/mol (1321.2585 without restraints) Performing minimization step: 3354. Total energy = 1323.2953 kcal/mol (1321.2029 without restraints) Performing minimization step: 3355. Total energy = 1323.2394 kcal/mol (1321.1474 without restraints) Performing minimization step: 3356. Total energy = 1323.1836 kcal/mol (1321.0919 without restraints) Performing minimization step: 3357. Total energy = 1323.1274 kcal/mol (1321.0359 without restraints) Performing minimization step: 3358. Total energy = 1323.0717 kcal/mol (1320.9807 without restraints) Performing minimization step: 3359. Total energy = 1323.0158 kcal/mol (1320.9252 without restraints) Performing minimization step: 3360. Total energy = 1322.9600 kcal/mol (1320.8697 without restraints) Performing minimization step: 3361. Total energy = 1322.9042 kcal/mol (1320.8143 without restraints) Performing minimization step: 3362. Total energy = 1322.8484 kcal/mol (1320.7589 without restraints) Performing minimization step: 3363. Total energy = 1322.7927 kcal/mol (1320.7035 without restraints) Performing minimization step: 3364. Total energy = 1322.7369 kcal/mol (1320.6482 without restraints) Performing minimization step: 3365. Total energy = 1322.6814 kcal/mol (1320.5929 without restraints) Performing minimization step: 3366. Total energy = 1322.6258 kcal/mol (1320.5376 without restraints) Performing minimization step: 3367. Total energy = 1322.5701 kcal/mol (1320.4822 without restraints) Performing minimization step: 3368. Total energy = 1322.5144 kcal/mol (1320.4269 without restraints) Performing minimization step: 3369. Total energy = 1322.4584 kcal/mol (1320.3712 without restraints) Performing minimization step: 3370. Total energy = 1322.4028 kcal/mol (1320.3160 without restraints) Performing minimization step: 3371. Total energy = 1322.3471 kcal/mol (1320.2607 without restraints) Performing minimization step: 3372. Total energy = 1322.2915 kcal/mol (1320.2054 without restraints) Performing minimization step: 3373. Total energy = 1322.2360 kcal/mol (1320.1503 without restraints) Performing minimization step: 3374. Total energy = 1322.1810 kcal/mol (1320.0957 without restraints) Performing minimization step: 3375. Total energy = 1322.1255 kcal/mol (1320.0405 without restraints) Performing minimization step: 3376. Total energy = 1322.0699 kcal/mol (1319.9853 without restraints) Performing minimization step: 3377. Total energy = 1322.0145 kcal/mol (1319.9302 without restraints) Performing minimization step: 3378. Total energy = 1321.9591 kcal/mol (1319.8751 without restraints) Performing minimization step: 3379. Total energy = 1321.9042 kcal/mol (1319.8205 without restraints) Performing minimization step: 3380. Total energy = 1321.8488 kcal/mol (1319.7654 without restraints) Performing minimization step: 3381. Total energy = 1321.7933 kcal/mol (1319.7103 without restraints) Performing minimization step: 3382. Total energy = 1321.7379 kcal/mol (1319.6553 without restraints) Performing minimization step: 3383. Total energy = 1321.6829 kcal/mol (1319.6007 without restraints) Performing minimization step: 3384. Total energy = 1321.6274 kcal/mol (1319.5455 without restraints) Performing minimization step: 3385. Total energy = 1321.5724 kcal/mol (1319.4908 without restraints) Performing minimization step: 3386. Total energy = 1321.5171 kcal/mol (1319.4358 without restraints) Performing minimization step: 3387. Total energy = 1321.4616 kcal/mol (1319.3807 without restraints) Performing minimization step: 3388. Total energy = 1321.4063 kcal/mol (1319.3257 without restraints) Performing minimization step: 3389. Total energy = 1321.3510 kcal/mol (1319.2708 without restraints) Performing minimization step: 3390. Total energy = 1321.2958 kcal/mol (1319.2159 without restraints) Performing minimization step: 3391. Total energy = 1321.2405 kcal/mol (1319.1610 without restraints) Performing minimization step: 3392. Total energy = 1321.1857 kcal/mol (1319.1065 without restraints) Performing minimization step: 3393. Total energy = 1321.1306 kcal/mol (1319.0517 without restraints) Performing minimization step: 3394. Total energy = 1321.0752 kcal/mol (1318.9967 without restraints) Performing minimization step: 3395. Total energy = 1321.0199 kcal/mol (1318.9417 without restraints) Performing minimization step: 3396. Total energy = 1320.9648 kcal/mol (1318.8870 without restraints) Performing minimization step: 3397. Total energy = 1320.9097 kcal/mol (1318.8322 without restraints) Performing minimization step: 3398. Total energy = 1320.8546 kcal/mol (1318.7775 without restraints) Performing minimization step: 3399. Total energy = 1320.7996 kcal/mol (1318.7228 without restraints) Performing minimization step: 3400. Total energy = 1320.7445 kcal/mol (1318.6681 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/f42e8b68/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 3401. Total energy = 1320.6895 kcal/mol (1318.6134 without restraints) Performing minimization step: 3402. Total energy = 1320.6343 kcal/mol (1318.5585 without restraints) Performing minimization step: 3403. Total energy = 1320.5793 kcal/mol (1318.5039 without restraints) Performing minimization step: 3404. Total energy = 1320.5243 kcal/mol (1318.4492 without restraints) Performing minimization step: 3405. Total energy = 1320.4694 kcal/mol (1318.3946 without restraints) Performing minimization step: 3406. Total energy = 1320.4144 kcal/mol (1318.3400 without restraints) Performing minimization step: 3407. Total energy = 1320.3595 kcal/mol (1318.2854 without restraints) Performing minimization step: 3408. Total energy = 1320.3046 kcal/mol (1318.2309 without restraints) Performing minimization step: 3409. Total energy = 1320.2498 kcal/mol (1318.1764 without restraints) Performing minimization step: 3410. Total energy = 1320.1949 kcal/mol (1318.1218 without restraints) Performing minimization step: 3411. Total energy = 1320.1401 kcal/mol (1318.0674 without restraints) Performing minimization step: 3412. Total energy = 1320.0861 kcal/mol (1318.0137 without restraints) Performing minimization step: 3413. Total energy = 1320.0312 kcal/mol (1317.9591 without restraints) Performing minimization step: 3414. Total energy = 1319.9764 kcal/mol (1317.9046 without restraints) Performing minimization step: 3415. Total energy = 1319.9216 kcal/mol (1317.8502 without restraints) Performing minimization step: 3416. Total energy = 1319.8671 kcal/mol (1317.7960 without restraints) Performing minimization step: 3417. Total energy = 1319.8123 kcal/mol (1317.7416 without restraints) Performing minimization step: 3418. Total energy = 1319.7576 kcal/mol (1317.6872 without restraints) Performing minimization step: 3419. Total energy = 1319.7029 kcal/mol (1317.6329 without restraints) Performing minimization step: 3420. Total energy = 1319.6489 kcal/mol (1317.5792 without restraints) Performing minimization step: 3421. Total energy = 1319.5938 kcal/mol (1317.5244 without restraints) Performing minimization step: 3422. Total energy = 1319.5390 kcal/mol (1317.4699 without restraints) Performing minimization step: 3423. Total energy = 1319.4846 kcal/mol (1317.4158 without restraints) Performing minimization step: 3424. Total energy = 1319.4298 kcal/mol (1317.3614 without restraints) Performing minimization step: 3425. Total energy = 1319.3753 kcal/mol (1317.3072 without restraints) Performing minimization step: 3426. Total energy = 1319.3207 kcal/mol (1317.2530 without restraints) Performing minimization step: 3427. Total energy = 1319.2662 kcal/mol (1317.1988 without restraints) Performing minimization step: 3428. Total energy = 1319.2115 kcal/mol (1317.1444 without restraints) Performing minimization step: 3429. Total energy = 1319.1570 kcal/mol (1317.0903 without restraints) Performing minimization step: 3430. Total energy = 1319.1026 kcal/mol (1317.0362 without restraints) Performing minimization step: 3431. Total energy = 1319.0477 kcal/mol (1316.9817 without restraints) Performing minimization step: 3432. Total energy = 1318.9934 kcal/mol (1316.9276 without restraints) Performing minimization step: 3433. Total energy = 1318.9390 kcal/mol (1316.8736 without restraints) Performing minimization step: 3434. Total energy = 1318.8846 kcal/mol (1316.8195 without restraints) Performing minimization step: 3435. Total energy = 1318.8305 kcal/mol (1316.7657 without restraints) Performing minimization step: 3436. Total energy = 1318.7761 kcal/mol (1316.7116 without restraints) Performing minimization step: 3437. Total energy = 1318.7216 kcal/mol (1316.6574 without restraints) Performing minimization step: 3438. Total energy = 1318.6672 kcal/mol (1316.6035 without restraints) Performing minimization step: 3439. Total energy = 1318.6129 kcal/mol (1316.5495 without restraints) Performing minimization step: 3440. Total energy = 1318.5582 kcal/mol (1316.4951 without restraints) Performing minimization step: 3441. Total energy = 1318.5040 kcal/mol (1316.4412 without restraints) Performing minimization step: 3442. Total energy = 1318.4498 kcal/mol (1316.3873 without restraints) Performing minimization step: 3443. Total energy = 1318.3956 kcal/mol (1316.3334 without restraints) Performing minimization step: 3444. Total energy = 1318.3414 kcal/mol (1316.2796 without restraints) Performing minimization step: 3445. Total energy = 1318.2872 kcal/mol (1316.2257 without restraints) Performing minimization step: 3446. Total energy = 1318.2329 kcal/mol (1316.1717 without restraints) Performing minimization step: 3447. Total energy = 1318.1790 kcal/mol (1316.1181 without restraints) Performing minimization step: 3448. Total energy = 1318.1251 kcal/mol (1316.0646 without restraints) Performing minimization step: 3449. Total energy = 1318.0710 kcal/mol (1316.0108 without restraints) Performing minimization step: 3450. Total energy = 1318.0167 kcal/mol (1315.9569 without restraints) Performing minimization step: 3451. Total energy = 1317.9627 kcal/mol (1315.9032 without restraints) Performing minimization step: 3452. Total energy = 1317.9087 kcal/mol (1315.8495 without restraints) Performing minimization step: 3453. Total energy = 1317.8545 kcal/mol (1315.7956 without restraints) Performing minimization step: 3454. Total energy = 1317.8005 kcal/mol (1315.7419 without restraints) Performing minimization step: 3455. Total energy = 1317.7463 kcal/mol (1315.6881 without restraints) Performing minimization step: 3456. Total energy = 1317.6927 kcal/mol (1315.6352 without restraints) Performing minimization step: 3457. Total energy = 1317.6390 kcal/mol (1315.5814 without restraints) Performing minimization step: 3458. Total energy = 1317.5855 kcal/mol (1315.5282 without restraints) Performing minimization step: 3459. Total energy = 1317.5315 kcal/mol (1315.4746 without restraints) Performing minimization step: 3460. Total energy = 1317.4778 kcal/mol (1315.4212 without restraints) Performing minimization step: 3461. Total energy = 1317.4237 kcal/mol (1315.3675 without restraints) Performing minimization step: 3462. Total energy = 1317.3698 kcal/mol (1315.3138 without restraints) Performing minimization step: 3463. Total energy = 1317.3161 kcal/mol (1315.2605 without restraints) Performing minimization step: 3464. Total energy = 1317.2624 kcal/mol (1315.2070 without restraints) Performing minimization step: 3465. Total energy = 1317.2088 kcal/mol (1315.1538 without restraints) Performing minimization step: 3466. Total energy = 1317.1551 kcal/mol (1315.1004 without restraints) Performing minimization step: 3467. Total energy = 1317.1014 kcal/mol (1315.0470 without restraints) Performing minimization step: 3468. Total energy = 1317.0477 kcal/mol (1314.9936 without restraints) Performing minimization step: 3469. Total energy = 1316.9940 kcal/mol (1314.9403 without restraints) Performing minimization step: 3470. Total energy = 1316.9403 kcal/mol (1314.8869 without restraints) Performing minimization step: 3471. Total energy = 1316.8867 kcal/mol (1314.8336 without restraints) Performing minimization step: 3472. Total energy = 1316.8332 kcal/mol (1314.7805 without restraints) Performing minimization step: 3473. Total energy = 1316.7794 kcal/mol (1314.7269 without restraints) Performing minimization step: 3474. Total energy = 1316.7253 kcal/mol (1314.6732 without restraints) Performing minimization step: 3475. Total energy = 1316.6718 kcal/mol (1314.6200 without restraints) Performing minimization step: 3476. Total energy = 1316.6183 kcal/mol (1314.5668 without restraints) Performing minimization step: 3477. Total energy = 1316.5647 kcal/mol (1314.5135 without restraints) Performing minimization step: 3478. Total energy = 1316.5113 kcal/mol (1314.4605 without restraints) Performing minimization step: 3479. Total energy = 1316.4579 kcal/mol (1314.4073 without restraints) Performing minimization step: 3480. Total energy = 1316.4046 kcal/mol (1314.3544 without restraints) Performing minimization step: 3481. Total energy = 1316.3511 kcal/mol (1314.3012 without restraints) Performing minimization step: 3482. Total energy = 1316.2977 kcal/mol (1314.2481 without restraints) Performing minimization step: 3483. Total energy = 1316.2445 kcal/mol (1314.1953 without restraints) Performing minimization step: 3484. Total energy = 1316.1910 kcal/mol (1314.1420 without restraints) Performing minimization step: 3485. Total energy = 1316.1376 kcal/mol (1314.0890 without restraints) Performing minimization step: 3486. Total energy = 1316.0842 kcal/mol (1314.0359 without restraints) Performing minimization step: 3487. Total energy = 1316.0309 kcal/mol (1313.9829 without restraints) Performing minimization step: 3488. Total energy = 1315.9777 kcal/mol (1313.9301 without restraints) Performing minimization step: 3489. Total energy = 1315.9245 kcal/mol (1313.8771 without restraints) Performing minimization step: 3490. Total energy = 1315.8710 kcal/mol (1313.8239 without restraints) Performing minimization step: 3491. Total energy = 1315.8177 kcal/mol (1313.7709 without restraints) Performing minimization step: 3492. Total energy = 1315.7645 kcal/mol (1313.7181 without restraints) Performing minimization step: 3493. Total energy = 1315.7115 kcal/mol (1313.6654 without restraints) Performing minimization step: 3494. Total energy = 1315.6583 kcal/mol (1313.6125 without restraints) Performing minimization step: 3495. Total energy = 1315.6051 kcal/mol (1313.5597 without restraints) Performing minimization step: 3496. Total energy = 1315.5515 kcal/mol (1313.5063 without restraints) Performing minimization step: 3497. Total energy = 1315.4983 kcal/mol (1313.4535 without restraints) Performing minimization step: 3498. Total energy = 1315.4452 kcal/mol (1313.4007 without restraints) Performing minimization step: 3499. Total energy = 1315.3921 kcal/mol (1313.3479 without restraints) Performing minimization step: 3500. Total energy = 1315.3391 kcal/mol (1313.2951 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/f42e8b68/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 3501. Total energy = 1315.2860 kcal/mol (1313.2424 without restraints) Performing minimization step: 3502. Total energy = 1315.2330 kcal/mol (1313.1897 without restraints) Performing minimization step: 3503. Total energy = 1315.1800 kcal/mol (1313.1370 without restraints) Performing minimization step: 3504. Total energy = 1315.1270 kcal/mol (1313.0843 without restraints) Performing minimization step: 3505. Total energy = 1315.0740 kcal/mol (1313.0316 without restraints) Performing minimization step: 3506. Total energy = 1315.0211 kcal/mol (1312.9790 without restraints) Performing minimization step: 3507. Total energy = 1314.9678 kcal/mol (1312.9261 without restraints) Performing minimization step: 3508. Total energy = 1314.9152 kcal/mol (1312.8738 without restraints) Performing minimization step: 3509. Total energy = 1314.8623 kcal/mol (1312.8212 without restraints) Performing minimization step: 3510. Total energy = 1314.8097 kcal/mol (1312.7689 without restraints) Performing minimization step: 3511. Total energy = 1314.7569 kcal/mol (1312.7164 without restraints) Performing minimization step: 3512. Total energy = 1314.7041 kcal/mol (1312.6639 without restraints) Performing minimization step: 3513. Total energy = 1314.6513 kcal/mol (1312.6114 without restraints) Performing minimization step: 3514. Total energy = 1314.5985 kcal/mol (1312.5589 without restraints) Performing minimization step: 3515. Total energy = 1314.5457 kcal/mol (1312.5065 without restraints) Performing minimization step: 3516. Total energy = 1314.4930 kcal/mol (1312.4540 without restraints) Performing minimization step: 3517. Total energy = 1314.4403 kcal/mol (1312.4016 without restraints) Performing minimization step: 3518. Total energy = 1314.3874 kcal/mol (1312.3490 without restraints) Performing minimization step: 3519. Total energy = 1314.3345 kcal/mol (1312.2964 without restraints) Performing minimization step: 3520. Total energy = 1314.2816 kcal/mol (1312.2437 without restraints) Performing minimization step: 3521. Total energy = 1314.2288 kcal/mol (1312.1914 without restraints) Performing minimization step: 3522. Total energy = 1314.1762 kcal/mol (1312.1391 without restraints) Performing minimization step: 3523. Total energy = 1314.1235 kcal/mol (1312.0864 without restraints) Performing minimization step: 3524. Total energy = 1314.0707 kcal/mol (1312.0342 without restraints) Performing minimization step: 3525. Total energy = 1314.0181 kcal/mol (1311.9819 without restraints) Performing minimization step: 3526. Total energy = 1313.9656 kcal/mol (1311.9297 without restraints) Performing minimization step: 3527. Total energy = 1313.9131 kcal/mol (1311.8775 without restraints) Performing minimization step: 3528. Total energy = 1313.8606 kcal/mol (1311.8254 without restraints) Performing minimization step: 3529. Total energy = 1313.8082 kcal/mol (1311.7732 without restraints) Performing minimization step: 3530. Total energy = 1313.7557 kcal/mol (1311.7210 without restraints) Performing minimization step: 3531. Total energy = 1313.7033 kcal/mol (1311.6689 without restraints) Performing minimization step: 3532. Total energy = 1313.6508 kcal/mol (1311.6167 without restraints) Performing minimization step: 3533. Total energy = 1313.5984 kcal/mol (1311.5647 without restraints) Performing minimization step: 3534. Total energy = 1313.5456 kcal/mol (1311.5121 without restraints) Performing minimization step: 3535. Total energy = 1313.4934 kcal/mol (1311.4603 without restraints) Performing minimization step: 3536. Total energy = 1313.4411 kcal/mol (1311.4083 without restraints) Performing minimization step: 3537. Total energy = 1313.3889 kcal/mol (1311.3563 without restraints) Performing minimization step: 3538. Total energy = 1313.3366 kcal/mol (1311.3043 without restraints) Performing minimization step: 3539. Total energy = 1313.2844 kcal/mol (1311.2524 without restraints) Performing minimization step: 3540. Total energy = 1313.2324 kcal/mol (1311.2009 without restraints) Performing minimization step: 3541. Total energy = 1313.1803 kcal/mol (1311.1489 without restraints) Performing minimization step: 3542. Total energy = 1313.1281 kcal/mol (1311.0970 without restraints) Performing minimization step: 3543. Total energy = 1313.0759 kcal/mol (1311.0451 without restraints) Performing minimization step: 3544. Total energy = 1313.0236 kcal/mol (1310.9931 without restraints) Performing minimization step: 3545. Total energy = 1312.9715 kcal/mol (1310.9413 without restraints) Performing minimization step: 3546. Total energy = 1312.9191 kcal/mol (1310.8893 without restraints) Performing minimization step: 3547. Total energy = 1312.8671 kcal/mol (1310.8375 without restraints) Performing minimization step: 3548. Total energy = 1312.8150 kcal/mol (1310.7858 without restraints) Performing minimization step: 3549. Total energy = 1312.7633 kcal/mol (1310.7344 without restraints) Performing minimization step: 3550. Total energy = 1312.7113 kcal/mol (1310.6828 without restraints) Performing minimization step: 3551. Total energy = 1312.6595 kcal/mol (1310.6311 without restraints) Performing minimization step: 3552. Total energy = 1312.6074 kcal/mol (1310.5792 without restraints) Performing minimization step: 3553. Total energy = 1312.5552 kcal/mol (1310.5274 without restraints) Performing minimization step: 3554. Total energy = 1312.5032 kcal/mol (1310.4758 without restraints) Performing minimization step: 3555. Total energy = 1312.4512 kcal/mol (1310.4240 without restraints) Performing minimization step: 3556. Total energy = 1312.3992 kcal/mol (1310.3724 without restraints) Performing minimization step: 3557. Total energy = 1312.3471 kcal/mol (1310.3206 without restraints) Performing minimization step: 3558. Total energy = 1312.2953 kcal/mol (1310.2690 without restraints) Performing minimization step: 3559. Total energy = 1312.2434 kcal/mol (1310.2175 without restraints) Performing minimization step: 3560. Total energy = 1312.1917 kcal/mol (1310.1660 without restraints) Performing minimization step: 3561. Total energy = 1312.1397 kcal/mol (1310.1143 without restraints) Performing minimization step: 3562. Total energy = 1312.0880 kcal/mol (1310.0629 without restraints) Performing minimization step: 3563. Total energy = 1312.0362 kcal/mol (1310.0114 without restraints) Performing minimization step: 3564. Total energy = 1311.9845 kcal/mol (1309.9600 without restraints) Performing minimization step: 3565. Total energy = 1311.9328 kcal/mol (1309.9086 without restraints) Performing minimization step: 3566. Total energy = 1311.8811 kcal/mol (1309.8572 without restraints) Performing minimization step: 3567. Total energy = 1311.8290 kcal/mol (1309.8055 without restraints) Performing minimization step: 3568. Total energy = 1311.7772 kcal/mol (1309.7539 without restraints) Performing minimization step: 3569. Total energy = 1311.7256 kcal/mol (1309.7026 without restraints) Performing minimization step: 3570. Total energy = 1311.6740 kcal/mol (1309.6514 without restraints) Performing minimization step: 3571. Total energy = 1311.6224 kcal/mol (1309.5999 without restraints) Performing minimization step: 3572. Total energy = 1311.5708 kcal/mol (1309.5487 without restraints) Performing minimization step: 3573. Total energy = 1311.5193 kcal/mol (1309.4975 without restraints) Performing minimization step: 3574. Total energy = 1311.4678 kcal/mol (1309.4463 without restraints) Performing minimization step: 3575. Total energy = 1311.4165 kcal/mol (1309.3952 without restraints) Performing minimization step: 3576. Total energy = 1311.3651 kcal/mol (1309.3442 without restraints) Performing minimization step: 3577. Total energy = 1311.3137 kcal/mol (1309.2931 without restraints) Performing minimization step: 3578. Total energy = 1311.2623 kcal/mol (1309.2420 without restraints) Performing minimization step: 3579. Total energy = 1311.2109 kcal/mol (1309.1909 without restraints) Performing minimization step: 3580. Total energy = 1311.1596 kcal/mol (1309.1398 without restraints) Performing minimization step: 3581. Total energy = 1311.1082 kcal/mol (1309.0888 without restraints) Performing minimization step: 3582. Total energy = 1311.0569 kcal/mol (1309.0378 without restraints) Performing minimization step: 3583. Total energy = 1311.0057 kcal/mol (1308.9869 without restraints) Performing minimization step: 3584. Total energy = 1310.9544 kcal/mol (1308.9358 without restraints) Performing minimization step: 3585. Total energy = 1310.9030 kcal/mol (1308.8848 without restraints) Performing minimization step: 3586. Total energy = 1310.8519 kcal/mol (1308.8339 without restraints) Performing minimization step: 3587. Total energy = 1310.8006 kcal/mol (1308.7829 without restraints) Performing minimization step: 3588. Total energy = 1310.7492 kcal/mol (1308.7318 without restraints) Performing minimization step: 3589. Total energy = 1310.6980 kcal/mol (1308.6809 without restraints) Performing minimization step: 3590. Total energy = 1310.6469 kcal/mol (1308.6301 without restraints) Performing minimization step: 3591. Total energy = 1310.5958 kcal/mol (1308.5792 without restraints) Performing minimization step: 3592. Total energy = 1310.5447 kcal/mol (1308.5284 without restraints) Performing minimization step: 3593. Total energy = 1310.4936 kcal/mol (1308.4777 without restraints) Performing minimization step: 3594. Total energy = 1310.4426 kcal/mol (1308.4269 without restraints) Performing minimization step: 3595. Total energy = 1310.3913 kcal/mol (1308.3760 without restraints) Performing minimization step: 3596. Total energy = 1310.3403 kcal/mol (1308.3252 without restraints) Performing minimization step: 3597. Total energy = 1310.2896 kcal/mol (1308.2748 without restraints) Performing minimization step: 3598. Total energy = 1310.2387 kcal/mol (1308.2241 without restraints) Performing minimization step: 3599. Total energy = 1310.1877 kcal/mol (1308.1735 without restraints) Performing minimization step: 3600. Total energy = 1310.1368 kcal/mol (1308.1229 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/f42e8b68/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 3601. Total energy = 1310.0861 kcal/mol (1308.0724 without restraints) Performing minimization step: 3602. Total energy = 1310.0352 kcal/mol (1308.0218 without restraints) Performing minimization step: 3603. Total energy = 1309.9844 kcal/mol (1307.9713 without restraints) Performing minimization step: 3604. Total energy = 1309.9338 kcal/mol (1307.9210 without restraints) Performing minimization step: 3605. Total energy = 1309.8830 kcal/mol (1307.8705 without restraints) Performing minimization step: 3606. Total energy = 1309.8322 kcal/mol (1307.8200 without restraints) Performing minimization step: 3607. Total energy = 1309.7813 kcal/mol (1307.7694 without restraints) Performing minimization step: 3608. Total energy = 1309.7306 kcal/mol (1307.7189 without restraints) Performing minimization step: 3609. Total energy = 1309.6796 kcal/mol (1307.6683 without restraints) Performing minimization step: 3610. Total energy = 1309.6289 kcal/mol (1307.6179 without restraints) Performing minimization step: 3611. Total energy = 1309.5785 kcal/mol (1307.5677 without restraints) Performing minimization step: 3612. Total energy = 1309.5279 kcal/mol (1307.5174 without restraints) Performing minimization step: 3613. Total energy = 1309.4774 kcal/mol (1307.4672 without restraints) Performing minimization step: 3614. Total energy = 1309.4268 kcal/mol (1307.4169 without restraints) Performing minimization step: 3615. Total energy = 1309.3765 kcal/mol (1307.3668 without restraints) Performing minimization step: 3616. Total energy = 1309.3258 kcal/mol (1307.3165 without restraints) Performing minimization step: 3617. Total energy = 1309.2753 kcal/mol (1307.2663 without restraints) Performing minimization step: 3618. Total energy = 1309.2248 kcal/mol (1307.2160 without restraints) Performing minimization step: 3619. Total energy = 1309.1743 kcal/mol (1307.1658 without restraints) Performing minimization step: 3620. Total energy = 1309.1239 kcal/mol (1307.1157 without restraints) Performing minimization step: 3621. Total energy = 1309.0734 kcal/mol (1307.0655 without restraints) Performing minimization step: 3622. Total energy = 1309.0230 kcal/mol (1307.0153 without restraints) Performing minimization step: 3623. Total energy = 1308.9726 kcal/mol (1306.9652 without restraints) Performing minimization step: 3624. Total energy = 1308.9222 kcal/mol (1306.9151 without restraints) Performing minimization step: 3625. Total energy = 1308.8719 kcal/mol (1306.8651 without restraints) Performing minimization step: 3626. Total energy = 1308.8216 kcal/mol (1306.8150 without restraints) Performing minimization step: 3627. Total energy = 1308.7711 kcal/mol (1306.7648 without restraints) Performing minimization step: 3628. Total energy = 1308.7208 kcal/mol (1306.7148 without restraints) Performing minimization step: 3629. Total energy = 1308.6705 kcal/mol (1306.6648 without restraints) Performing minimization step: 3630. Total energy = 1308.6205 kcal/mol (1306.6151 without restraints) Performing minimization step: 3631. Total energy = 1308.5703 kcal/mol (1306.5651 without restraints) Performing minimization step: 3632. Total energy = 1308.5201 kcal/mol (1306.5152 without restraints) Performing minimization step: 3633. Total energy = 1308.4699 kcal/mol (1306.4653 without restraints) Performing minimization step: 3634. Total energy = 1308.4197 kcal/mol (1306.4155 without restraints) Performing minimization step: 3635. Total energy = 1308.3696 kcal/mol (1306.3656 without restraints) Performing minimization step: 3636. Total energy = 1308.3195 kcal/mol (1306.3158 without restraints) Performing minimization step: 3637. Total energy = 1308.2694 kcal/mol (1306.2660 without restraints) Performing minimization step: 3638. Total energy = 1308.2193 kcal/mol (1306.2162 without restraints) Performing minimization step: 3639. Total energy = 1308.1693 kcal/mol (1306.1664 without restraints) Performing minimization step: 3640. Total energy = 1308.1194 kcal/mol (1306.1168 without restraints) Performing minimization step: 3641. Total energy = 1308.0694 kcal/mol (1306.0671 without restraints) Performing minimization step: 3642. Total energy = 1308.0195 kcal/mol (1306.0175 without restraints) Performing minimization step: 3643. Total energy = 1307.9695 kcal/mol (1305.9677 without restraints) Performing minimization step: 3644. Total energy = 1307.9196 kcal/mol (1305.9181 without restraints) Performing minimization step: 3645. Total energy = 1307.8697 kcal/mol (1305.8685 without restraints) Performing minimization step: 3646. Total energy = 1307.8194 kcal/mol (1305.8185 without restraints) Performing minimization step: 3647. Total energy = 1307.7696 kcal/mol (1305.7690 without restraints) Performing minimization step: 3648. Total energy = 1307.7197 kcal/mol (1305.7194 without restraints) Performing minimization step: 3649. Total energy = 1307.6699 kcal/mol (1305.6699 without restraints) Performing minimization step: 3650. Total energy = 1307.6201 kcal/mol (1305.6203 without restraints) Performing minimization step: 3651. Total energy = 1307.5704 kcal/mol (1305.5709 without restraints) Performing minimization step: 3652. Total energy = 1307.5206 kcal/mol (1305.5214 without restraints) Performing minimization step: 3653. Total energy = 1307.4709 kcal/mol (1305.4720 without restraints) Performing minimization step: 3654. Total energy = 1307.4210 kcal/mol (1305.4224 without restraints) Performing minimization step: 3655. Total energy = 1307.3714 kcal/mol (1305.3729 without restraints) Performing minimization step: 3656. Total energy = 1307.3217 kcal/mol (1305.3236 without restraints) Performing minimization step: 3657. Total energy = 1307.2721 kcal/mol (1305.2742 without restraints) Performing minimization step: 3658. Total energy = 1307.2225 kcal/mol (1305.2249 without restraints) Performing minimization step: 3659. Total energy = 1307.1729 kcal/mol (1305.1756 without restraints) Performing minimization step: 3660. Total energy = 1307.1232 kcal/mol (1305.1261 without restraints) Performing minimization step: 3661. Total energy = 1307.0734 kcal/mol (1305.0767 without restraints) Performing minimization step: 3662. Total energy = 1307.0238 kcal/mol (1305.0273 without restraints) Performing minimization step: 3663. Total energy = 1306.9742 kcal/mol (1304.9780 without restraints) Performing minimization step: 3664. Total energy = 1306.9248 kcal/mol (1304.9288 without restraints) Performing minimization step: 3665. Total energy = 1306.8756 kcal/mol (1304.8799 without restraints) Performing minimization step: 3666. Total energy = 1306.8264 kcal/mol (1304.8310 without restraints) Performing minimization step: 3667. Total energy = 1306.7770 kcal/mol (1304.7819 without restraints) Performing minimization step: 3668. Total energy = 1306.7276 kcal/mol (1304.7328 without restraints) Performing minimization step: 3669. Total energy = 1306.6782 kcal/mol (1304.6837 without restraints) Performing minimization step: 3670. Total energy = 1306.6289 kcal/mol (1304.6346 without restraints) Performing minimization step: 3671. Total energy = 1306.5796 kcal/mol (1304.5856 without restraints) Performing minimization step: 3672. Total energy = 1306.5303 kcal/mol (1304.5365 without restraints) Performing minimization step: 3673. Total energy = 1306.4810 kcal/mol (1304.4875 without restraints) Performing minimization step: 3674. Total energy = 1306.4318 kcal/mol (1304.4386 without restraints) Performing minimization step: 3675. Total energy = 1306.3826 kcal/mol (1304.3896 without restraints) Performing minimization step: 3676. Total energy = 1306.3333 kcal/mol (1304.3407 without restraints) Performing minimization step: 3677. Total energy = 1306.2842 kcal/mol (1304.2918 without restraints) Performing minimization step: 3678. Total energy = 1306.2350 kcal/mol (1304.2429 without restraints) Performing minimization step: 3679. Total energy = 1306.1856 kcal/mol (1304.1938 without restraints) Performing minimization step: 3680. Total energy = 1306.1365 kcal/mol (1304.1449 without restraints) Performing minimization step: 3681. Total energy = 1306.0874 kcal/mol (1304.0961 without restraints) Performing minimization step: 3682. Total energy = 1306.0383 kcal/mol (1304.0472 without restraints) Performing minimization step: 3683. Total energy = 1305.9892 kcal/mol (1303.9985 without restraints) Performing minimization step: 3684. Total energy = 1305.9400 kcal/mol (1303.9495 without restraints) Performing minimization step: 3685. Total energy = 1305.8908 kcal/mol (1303.9006 without restraints) Performing minimization step: 3686. Total energy = 1305.8422 kcal/mol (1303.8522 without restraints) Performing minimization step: 3687. Total energy = 1305.7932 kcal/mol (1303.8036 without restraints) Performing minimization step: 3688. Total energy = 1305.7441 kcal/mol (1303.7547 without restraints) Performing minimization step: 3689. Total energy = 1305.6952 kcal/mol (1303.7060 without restraints) Performing minimization step: 3690. Total energy = 1305.6464 kcal/mol (1303.6575 without restraints) Performing minimization step: 3691. Total energy = 1305.5975 kcal/mol (1303.6089 without restraints) Performing minimization step: 3692. Total energy = 1305.5484 kcal/mol (1303.5601 without restraints) Performing minimization step: 3693. Total energy = 1305.4998 kcal/mol (1303.5117 without restraints) Performing minimization step: 3694. Total energy = 1305.4510 kcal/mol (1303.4632 without restraints) Performing minimization step: 3695. Total energy = 1305.4022 kcal/mol (1303.4146 without restraints) Performing minimization step: 3696. Total energy = 1305.3533 kcal/mol (1303.3661 without restraints) Performing minimization step: 3697. Total energy = 1305.3046 kcal/mol (1303.3176 without restraints) Performing minimization step: 3698. Total energy = 1305.2559 kcal/mol (1303.2691 without restraints) Performing minimization step: 3699. Total energy = 1305.2072 kcal/mol (1303.2207 without restraints) Performing minimization step: 3700. Total energy = 1305.1585 kcal/mol (1303.1723 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/f42e8b68/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 3701. Total energy = 1305.1098 kcal/mol (1303.1239 without restraints) Performing minimization step: 3702. Total energy = 1305.0612 kcal/mol (1303.0755 without restraints) Performing minimization step: 3703. Total energy = 1305.0123 kcal/mol (1303.0269 without restraints) Performing minimization step: 3704. Total energy = 1304.9637 kcal/mol (1302.9786 without restraints) Performing minimization step: 3705. Total energy = 1304.9153 kcal/mol (1302.9305 without restraints) Performing minimization step: 3706. Total energy = 1304.8668 kcal/mol (1302.8822 without restraints) Performing minimization step: 3707. Total energy = 1304.8183 kcal/mol (1302.8339 without restraints) Performing minimization step: 3708. Total energy = 1304.7698 kcal/mol (1302.7857 without restraints) Performing minimization step: 3709. Total energy = 1304.7213 kcal/mol (1302.7375 without restraints) Performing minimization step: 3710. Total energy = 1304.6728 kcal/mol (1302.6893 without restraints) Performing minimization step: 3711. Total energy = 1304.6244 kcal/mol (1302.6411 without restraints) Performing minimization step: 3712. Total energy = 1304.5759 kcal/mol (1302.5929 without restraints) Performing minimization step: 3713. Total energy = 1304.5275 kcal/mol (1302.5448 without restraints) Performing minimization step: 3714. Total energy = 1304.4791 kcal/mol (1302.4966 without restraints) Performing minimization step: 3715. Total energy = 1304.4307 kcal/mol (1302.4485 without restraints) Performing minimization step: 3716. Total energy = 1304.3824 kcal/mol (1302.4004 without restraints) Performing minimization step: 3717. Total energy = 1304.3340 kcal/mol (1302.3523 without restraints) Performing minimization step: 3718. Total energy = 1304.2857 kcal/mol (1302.3043 without restraints) Performing minimization step: 3719. Total energy = 1304.2374 kcal/mol (1302.2562 without restraints) Performing minimization step: 3720. Total energy = 1304.1892 kcal/mol (1302.2083 without restraints) Performing minimization step: 3721. Total energy = 1304.1409 kcal/mol (1302.1603 without restraints) Performing minimization step: 3722. Total energy = 1304.0927 kcal/mol (1302.1123 without restraints) Performing minimization step: 3723. Total energy = 1304.0443 kcal/mol (1302.0642 without restraints) Performing minimization step: 3724. Total energy = 1303.9961 kcal/mol (1302.0163 without restraints) Performing minimization step: 3725. Total energy = 1303.9480 kcal/mol (1301.9684 without restraints) Performing minimization step: 3726. Total energy = 1303.8999 kcal/mol (1301.9206 without restraints) Performing minimization step: 3727. Total energy = 1303.8516 kcal/mol (1301.8725 without restraints) Performing minimization step: 3728. Total energy = 1303.8036 kcal/mol (1301.8248 without restraints) Performing minimization step: 3729. Total energy = 1303.7555 kcal/mol (1301.7770 without restraints) Performing minimization step: 3730. Total energy = 1303.7075 kcal/mol (1301.7292 without restraints) Performing minimization step: 3731. Total energy = 1303.6595 kcal/mol (1301.6814 without restraints) Performing minimization step: 3732. Total energy = 1303.6115 kcal/mol (1301.6337 without restraints) Performing minimization step: 3733. Total energy = 1303.5636 kcal/mol (1301.5860 without restraints) Performing minimization step: 3734. Total energy = 1303.5155 kcal/mol (1301.5383 without restraints) Performing minimization step: 3735. Total energy = 1303.4676 kcal/mol (1301.4906 without restraints) Performing minimization step: 3736. Total energy = 1303.4197 kcal/mol (1301.4430 without restraints) Performing minimization step: 3737. Total energy = 1303.3718 kcal/mol (1301.3954 without restraints) Performing minimization step: 3738. Total energy = 1303.3242 kcal/mol (1301.3480 without restraints) Performing minimization step: 3739. Total energy = 1303.2764 kcal/mol (1301.3004 without restraints) Performing minimization step: 3740. Total energy = 1303.2285 kcal/mol (1301.2529 without restraints) Performing minimization step: 3741. Total energy = 1303.1806 kcal/mol (1301.2051 without restraints) Performing minimization step: 3742. Total energy = 1303.1327 kcal/mol (1301.1576 without restraints) Performing minimization step: 3743. Total energy = 1303.0851 kcal/mol (1301.1102 without restraints) Performing minimization step: 3744. Total energy = 1303.0374 kcal/mol (1301.0628 without restraints) Performing minimization step: 3745. Total energy = 1302.9899 kcal/mol (1301.0155 without restraints) Performing minimization step: 3746. Total energy = 1302.9422 kcal/mol (1300.9681 without restraints) Performing minimization step: 3747. Total energy = 1302.8945 kcal/mol (1300.9207 without restraints) Performing minimization step: 3748. Total energy = 1302.8471 kcal/mol (1300.8734 without restraints) Performing minimization step: 3749. Total energy = 1302.7994 kcal/mol (1300.8261 without restraints) Performing minimization step: 3750. Total energy = 1302.7518 kcal/mol (1300.7787 without restraints) Performing minimization step: 3751. Total energy = 1302.7040 kcal/mol (1300.7312 without restraints) Performing minimization step: 3752. Total energy = 1302.6566 kcal/mol (1300.6840 without restraints) Performing minimization step: 3753. Total energy = 1302.6091 kcal/mol (1300.6367 without restraints) Performing minimization step: 3754. Total energy = 1302.5615 kcal/mol (1300.5895 without restraints) Performing minimization step: 3755. Total energy = 1302.5140 kcal/mol (1300.5422 without restraints) Performing minimization step: 3756. Total energy = 1302.4665 kcal/mol (1300.4950 without restraints) Performing minimization step: 3757. Total energy = 1302.4190 kcal/mol (1300.4477 without restraints) Performing minimization step: 3758. Total energy = 1302.3716 kcal/mol (1300.4006 without restraints) Performing minimization step: 3759. Total energy = 1302.3242 kcal/mol (1300.3534 without restraints) Performing minimization step: 3760. Total energy = 1302.2767 kcal/mol (1300.3061 without restraints) Performing minimization step: 3761. Total energy = 1302.2292 kcal/mol (1300.2589 without restraints) Performing minimization step: 3762. Total energy = 1302.1818 kcal/mol (1300.2118 without restraints) Performing minimization step: 3763. Total energy = 1302.1345 kcal/mol (1300.1647 without restraints) Performing minimization step: 3764. Total energy = 1302.0871 kcal/mol (1300.1176 without restraints) Performing minimization step: 3765. Total energy = 1302.0398 kcal/mol (1300.0705 without restraints) Performing minimization step: 3766. Total energy = 1301.9925 kcal/mol (1300.0235 without restraints) Performing minimization step: 3767. Total energy = 1301.9452 kcal/mol (1299.9764 without restraints) Performing minimization step: 3768. Total energy = 1301.8979 kcal/mol (1299.9294 without restraints) Performing minimization step: 3769. Total energy = 1301.8508 kcal/mol (1299.8826 without restraints) Performing minimization step: 3770. Total energy = 1301.8033 kcal/mol (1299.8353 without restraints) Performing minimization step: 3771. Total energy = 1301.7559 kcal/mol (1299.7881 without restraints) Performing minimization step: 3772. Total energy = 1301.7085 kcal/mol (1299.7410 without restraints) Performing minimization step: 3773. Total energy = 1301.6614 kcal/mol (1299.6942 without restraints) Performing minimization step: 3774. Total energy = 1301.6143 kcal/mol (1299.6473 without restraints) Performing minimization step: 3775. Total energy = 1301.5674 kcal/mol (1299.6006 without restraints) Performing minimization step: 3776. Total energy = 1301.5201 kcal/mol (1299.5536 without restraints) Performing minimization step: 3777. Total energy = 1301.4730 kcal/mol (1299.5068 without restraints) Performing minimization step: 3778. Total energy = 1301.4259 kcal/mol (1299.4600 without restraints) Performing minimization step: 3779. Total energy = 1301.3789 kcal/mol (1299.4132 without restraints) Performing minimization step: 3780. Total energy = 1301.3320 kcal/mol (1299.3666 without restraints) Performing minimization step: 3781. Total energy = 1301.2851 kcal/mol (1299.3199 without restraints) Performing minimization step: 3782. Total energy = 1301.2386 kcal/mol (1299.2737 without restraints) Performing minimization step: 3783. Total energy = 1301.1917 kcal/mol (1299.2270 without restraints) Performing minimization step: 3784. Total energy = 1301.1450 kcal/mol (1299.1805 without restraints) Performing minimization step: 3785. Total energy = 1301.0981 kcal/mol (1299.1339 without restraints) Performing minimization step: 3786. Total energy = 1301.0513 kcal/mol (1299.0875 without restraints) Performing minimization step: 3787. Total energy = 1301.0048 kcal/mol (1299.0411 without restraints) Performing minimization step: 3788. Total energy = 1300.9580 kcal/mol (1298.9945 without restraints) Performing minimization step: 3789. Total energy = 1300.9111 kcal/mol (1298.9479 without restraints) Performing minimization step: 3790. Total energy = 1300.8643 kcal/mol (1298.9013 without restraints) Performing minimization step: 3791. Total energy = 1300.8173 kcal/mol (1298.8546 without restraints) Performing minimization step: 3792. Total energy = 1300.7705 kcal/mol (1298.8080 without restraints) Performing minimization step: 3793. Total energy = 1300.7238 kcal/mol (1298.7616 without restraints) Performing minimization step: 3794. Total energy = 1300.6771 kcal/mol (1298.7151 without restraints) Performing minimization step: 3795. Total energy = 1300.6304 kcal/mol (1298.6687 without restraints) Performing minimization step: 3796. Total energy = 1300.5835 kcal/mol (1298.6220 without restraints) Performing minimization step: 3797. Total energy = 1300.5366 kcal/mol (1298.5753 without restraints) Performing minimization step: 3798. Total energy = 1300.4898 kcal/mol (1298.5287 without restraints) Performing minimization step: 3799. Total energy = 1300.4430 kcal/mol (1298.4823 without restraints) Performing minimization step: 3800. Total energy = 1300.3961 kcal/mol (1298.4356 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/f42e8b68/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 3801. Total energy = 1300.3496 kcal/mol (1298.3893 without restraints) Performing minimization step: 3802. Total energy = 1300.3030 kcal/mol (1298.3430 without restraints) Performing minimization step: 3803. Total energy = 1300.2564 kcal/mol (1298.2966 without restraints) Performing minimization step: 3804. Total energy = 1300.2101 kcal/mol (1298.2506 without restraints) Performing minimization step: 3805. Total energy = 1300.1636 kcal/mol (1298.2043 without restraints) Performing minimization step: 3806. Total energy = 1300.1171 kcal/mol (1298.1580 without restraints) Performing minimization step: 3807. Total energy = 1300.0708 kcal/mol (1298.1120 without restraints) Performing minimization step: 3808. Total energy = 1300.0244 kcal/mol (1298.0658 without restraints) Performing minimization step: 3809. Total energy = 1299.9779 kcal/mol (1298.0196 without restraints) Performing minimization step: 3810. Total energy = 1299.9315 kcal/mol (1297.9734 without restraints) Performing minimization step: 3811. Total energy = 1299.8851 kcal/mol (1297.9273 without restraints) Performing minimization step: 3812. Total energy = 1299.8387 kcal/mol (1297.8811 without restraints) Performing minimization step: 3813. Total energy = 1299.7927 kcal/mol (1297.8353 without restraints) Performing minimization step: 3814. Total energy = 1299.7465 kcal/mol (1297.7894 without restraints) Performing minimization step: 3815. Total energy = 1299.7001 kcal/mol (1297.7433 without restraints) Performing minimization step: 3816. Total energy = 1299.6538 kcal/mol (1297.6972 without restraints) Performing minimization step: 3817. Total energy = 1299.6073 kcal/mol (1297.6510 without restraints) Performing minimization step: 3818. Total energy = 1299.5613 kcal/mol (1297.6054 without restraints) Performing minimization step: 3819. Total energy = 1299.5159 kcal/mol (1297.5600 without restraints) Performing minimization step: 3820. Total energy = 1299.4702 kcal/mol (1297.5146 without restraints) Performing minimization step: 3821. Total energy = 1299.4241 kcal/mol (1297.4687 without restraints) Performing minimization step: 3822. Total energy = 1299.3776 kcal/mol (1297.4225 without restraints) Performing minimization step: 3823. Total energy = 1299.3314 kcal/mol (1297.3765 without restraints) Performing minimization step: 3824. Total energy = 1299.2852 kcal/mol (1297.3306 without restraints) Performing minimization step: 3825. Total energy = 1299.2390 kcal/mol (1297.2846 without restraints) Performing minimization step: 3826. Total energy = 1299.1929 kcal/mol (1297.2387 without restraints) Performing minimization step: 3827. Total energy = 1299.1467 kcal/mol (1297.1928 without restraints) Performing minimization step: 3828. Total energy = 1299.1006 kcal/mol (1297.1470 without restraints) Performing minimization step: 3829. Total energy = 1299.0546 kcal/mol (1297.1012 without restraints) Performing minimization step: 3830. Total energy = 1299.0086 kcal/mol (1297.0555 without restraints) Performing minimization step: 3831. Total energy = 1298.9627 kcal/mol (1297.0097 without restraints) Performing minimization step: 3832. Total energy = 1298.9167 kcal/mol (1296.9640 without restraints) Performing minimization step: 3833. Total energy = 1298.8707 kcal/mol (1296.9182 without restraints) Performing minimization step: 3834. Total energy = 1298.8248 kcal/mol (1296.8725 without restraints) Performing minimization step: 3835. Total energy = 1298.7788 kcal/mol (1296.8268 without restraints) Performing minimization step: 3836. Total energy = 1298.7327 kcal/mol (1296.7810 without restraints) Performing minimization step: 3837. Total energy = 1298.6868 kcal/mol (1296.7353 without restraints) Performing minimization step: 3838. Total energy = 1298.6409 kcal/mol (1296.6896 without restraints) Performing minimization step: 3839. Total energy = 1298.5950 kcal/mol (1296.6439 without restraints) Performing minimization step: 3840. Total energy = 1298.5491 kcal/mol (1296.5983 without restraints) Performing minimization step: 3841. Total energy = 1298.5030 kcal/mol (1296.5525 without restraints) Performing minimization step: 3842. Total energy = 1298.4572 kcal/mol (1296.5069 without restraints) Performing minimization step: 3843. Total energy = 1298.4114 kcal/mol (1296.4613 without restraints) Performing minimization step: 3844. Total energy = 1298.3658 kcal/mol (1296.4160 without restraints) Performing minimization step: 3845. Total energy = 1298.3200 kcal/mol (1296.3704 without restraints) Performing minimization step: 3846. Total energy = 1298.2744 kcal/mol (1296.3250 without restraints) Performing minimization step: 3847. Total energy = 1298.2286 kcal/mol (1296.2795 without restraints) Performing minimization step: 3848. Total energy = 1298.1829 kcal/mol (1296.2340 without restraints) Performing minimization step: 3849. Total energy = 1298.1370 kcal/mol (1296.1883 without restraints) Performing minimization step: 3850. Total energy = 1298.0913 kcal/mol (1296.1429 without restraints) Performing minimization step: 3851. Total energy = 1298.0456 kcal/mol (1296.0975 without restraints) Performing minimization step: 3852. Total energy = 1298.0000 kcal/mol (1296.0520 without restraints) Performing minimization step: 3853. Total energy = 1297.9543 kcal/mol (1296.0066 without restraints) Performing minimization step: 3854. Total energy = 1297.9087 kcal/mol (1295.9613 without restraints) Performing minimization step: 3855. Total energy = 1297.8630 kcal/mol (1295.9157 without restraints) Performing minimization step: 3856. Total energy = 1297.8173 kcal/mol (1295.8704 without restraints) Performing minimization step: 3857. Total energy = 1297.7718 kcal/mol (1295.8250 without restraints) Performing minimization step: 3858. Total energy = 1297.7262 kcal/mol (1295.7797 without restraints) Performing minimization step: 3859. Total energy = 1297.6807 kcal/mol (1295.7344 without restraints) Performing minimization step: 3860. Total energy = 1297.6351 kcal/mol (1295.6891 without restraints) Performing minimization step: 3861. Total energy = 1297.5898 kcal/mol (1295.6440 without restraints) Performing minimization step: 3862. Total energy = 1297.5445 kcal/mol (1295.5990 without restraints) Performing minimization step: 3863. Total energy = 1297.4990 kcal/mol (1295.5537 without restraints) Performing minimization step: 3864. Total energy = 1297.4536 kcal/mol (1295.5085 without restraints) Performing minimization step: 3865. Total energy = 1297.4082 kcal/mol (1295.4633 without restraints) Performing minimization step: 3866. Total energy = 1297.3627 kcal/mol (1295.4181 without restraints) Performing minimization step: 3867. Total energy = 1297.3173 kcal/mol (1295.3729 without restraints) Performing minimization step: 3868. Total energy = 1297.2722 kcal/mol (1295.3280 without restraints) Performing minimization step: 3869. Total energy = 1297.2268 kcal/mol (1295.2829 without restraints) Performing minimization step: 3870. Total energy = 1297.1813 kcal/mol (1295.2376 without restraints) Performing minimization step: 3871. Total energy = 1297.1359 kcal/mol (1295.1925 without restraints) Performing minimization step: 3872. Total energy = 1297.0905 kcal/mol (1295.1471 without restraints) Performing minimization step: 3873. Total energy = 1297.0450 kcal/mol (1295.1020 without restraints) Performing minimization step: 3874. Total energy = 1296.9999 kcal/mol (1295.0572 without restraints) Performing minimization step: 3875. Total energy = 1296.9547 kcal/mol (1295.0121 without restraints) Performing minimization step: 3876. Total energy = 1296.9094 kcal/mol (1294.9671 without restraints) Performing minimization step: 3877. Total energy = 1296.8644 kcal/mol (1294.9224 without restraints) Performing minimization step: 3878. Total energy = 1296.8193 kcal/mol (1294.8774 without restraints) Performing minimization step: 3879. Total energy = 1296.7741 kcal/mol (1294.8325 without restraints) Performing minimization step: 3880. Total energy = 1296.7289 kcal/mol (1294.7875 without restraints) Performing minimization step: 3881. Total energy = 1296.6837 kcal/mol (1294.7426 without restraints) Performing minimization step: 3882. Total energy = 1296.6386 kcal/mol (1294.6976 without restraints) Performing minimization step: 3883. Total energy = 1296.5934 kcal/mol (1294.6528 without restraints) Performing minimization step: 3884. Total energy = 1296.5483 kcal/mol (1294.6079 without restraints) Performing minimization step: 3885. Total energy = 1296.5032 kcal/mol (1294.5630 without restraints) Performing minimization step: 3886. Total energy = 1296.4582 kcal/mol (1294.5182 without restraints) Performing minimization step: 3887. Total energy = 1296.4129 kcal/mol (1294.4731 without restraints) Performing minimization step: 3888. Total energy = 1296.3676 kcal/mol (1294.4281 without restraints) Performing minimization step: 3889. Total energy = 1296.3226 kcal/mol (1294.3833 without restraints) Performing minimization step: 3890. Total energy = 1296.2776 kcal/mol (1294.3385 without restraints) Performing minimization step: 3891. Total energy = 1296.2326 kcal/mol (1294.2938 without restraints) Performing minimization step: 3892. Total energy = 1296.1876 kcal/mol (1294.2490 without restraints) Performing minimization step: 3893. Total energy = 1296.1427 kcal/mol (1294.2043 without restraints) Performing minimization step: 3894. Total energy = 1296.0977 kcal/mol (1294.1596 without restraints) Performing minimization step: 3895. Total energy = 1296.0528 kcal/mol (1294.1149 without restraints) Performing minimization step: 3896. Total energy = 1296.0079 kcal/mol (1294.0702 without restraints) Performing minimization step: 3897. Total energy = 1295.9630 kcal/mol (1294.0256 without restraints) Performing minimization step: 3898. Total energy = 1295.9182 kcal/mol (1293.9809 without restraints) Performing minimization step: 3899. Total energy = 1295.8737 kcal/mol (1293.9366 without restraints) Performing minimization step: 3900. Total energy = 1295.8288 kcal/mol (1293.8920 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/f42e8b68/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 3901. Total energy = 1295.7841 kcal/mol (1293.8476 without restraints) Performing minimization step: 3902. Total energy = 1295.7393 kcal/mol (1293.8030 without restraints) Performing minimization step: 3903. Total energy = 1295.6946 kcal/mol (1293.7585 without restraints) Performing minimization step: 3904. Total energy = 1295.6500 kcal/mol (1293.7141 without restraints) Performing minimization step: 3905. Total energy = 1295.6052 kcal/mol (1293.6696 without restraints) Performing minimization step: 3906. Total energy = 1295.5606 kcal/mol (1293.6252 without restraints) Performing minimization step: 3907. Total energy = 1295.5157 kcal/mol (1293.5805 without restraints) Performing minimization step: 3908. Total energy = 1295.4706 kcal/mol (1293.5356 without restraints) Performing minimization step: 3909. Total energy = 1295.4256 kcal/mol (1293.4909 without restraints) Performing minimization step: 3910. Total energy = 1295.3809 kcal/mol (1293.4464 without restraints) Performing minimization step: 3911. Total energy = 1295.3364 kcal/mol (1293.4021 without restraints) Performing minimization step: 3912. Total energy = 1295.2918 kcal/mol (1293.3577 without restraints) Performing minimization step: 3913. Total energy = 1295.2472 kcal/mol (1293.3133 without restraints) Performing minimization step: 3914. Total energy = 1295.2026 kcal/mol (1293.2689 without restraints) Performing minimization step: 3915. Total energy = 1295.1580 kcal/mol (1293.2246 without restraints) Performing minimization step: 3916. Total energy = 1295.1134 kcal/mol (1293.1802 without restraints) Performing minimization step: 3917. Total energy = 1295.0689 kcal/mol (1293.1360 without restraints) Performing minimization step: 3918. Total energy = 1295.0244 kcal/mol (1293.0917 without restraints) Performing minimization step: 3919. Total energy = 1294.9799 kcal/mol (1293.0474 without restraints) Performing minimization step: 3920. Total energy = 1294.9353 kcal/mol (1293.0031 without restraints) Performing minimization step: 3921. Total energy = 1294.8908 kcal/mol (1292.9588 without restraints) Performing minimization step: 3922. Total energy = 1294.8464 kcal/mol (1292.9145 without restraints) Performing minimization step: 3923. Total energy = 1294.8019 kcal/mol (1292.8703 without restraints) Performing minimization step: 3924. Total energy = 1294.7574 kcal/mol (1292.8261 without restraints) Performing minimization step: 3925. Total energy = 1294.7134 kcal/mol (1292.7823 without restraints) Performing minimization step: 3926. Total energy = 1294.6690 kcal/mol (1292.7381 without restraints) Performing minimization step: 3927. Total energy = 1294.6244 kcal/mol (1292.6937 without restraints) Performing minimization step: 3928. Total energy = 1294.5800 kcal/mol (1292.6496 without restraints) Performing minimization step: 3929. Total energy = 1294.5357 kcal/mol (1292.6054 without restraints) Performing minimization step: 3930. Total energy = 1294.4913 kcal/mol (1292.5612 without restraints) Performing minimization step: 3931. Total energy = 1294.4469 kcal/mol (1292.5171 without restraints) Performing minimization step: 3932. Total energy = 1294.4027 kcal/mol (1292.4731 without restraints) Performing minimization step: 3933. Total energy = 1294.3584 kcal/mol (1292.4290 without restraints) Performing minimization step: 3934. Total energy = 1294.3141 kcal/mol (1292.3849 without restraints) Performing minimization step: 3935. Total energy = 1294.2698 kcal/mol (1292.3409 without restraints) Performing minimization step: 3936. Total energy = 1294.2256 kcal/mol (1292.2969 without restraints) Performing minimization step: 3937. Total energy = 1294.1813 kcal/mol (1292.2528 without restraints) Performing minimization step: 3938. Total energy = 1294.1371 kcal/mol (1292.2088 without restraints) Performing minimization step: 3939. Total energy = 1294.0929 kcal/mol (1292.1648 without restraints) Performing minimization step: 3940. Total energy = 1294.0487 kcal/mol (1292.1209 without restraints) Performing minimization step: 3941. Total energy = 1294.0045 kcal/mol (1292.0769 without restraints) Performing minimization step: 3942. Total energy = 1293.9603 kcal/mol (1292.0329 without restraints) Performing minimization step: 3943. Total energy = 1293.9161 kcal/mol (1291.9890 without restraints) Performing minimization step: 3944. Total energy = 1293.8717 kcal/mol (1291.9448 without restraints) Performing minimization step: 3945. Total energy = 1293.8274 kcal/mol (1291.9005 without restraints) Performing minimization step: 3946. Total energy = 1293.7830 kcal/mol (1291.8564 without restraints) Performing minimization step: 3947. Total energy = 1293.7388 kcal/mol (1291.8125 without restraints) Performing minimization step: 3948. Total energy = 1293.6947 kcal/mol (1291.7686 without restraints) Performing minimization step: 3949. Total energy = 1293.6509 kcal/mol (1291.7252 without restraints) Performing minimization step: 3950. Total energy = 1293.6070 kcal/mol (1291.6814 without restraints) Performing minimization step: 3951. Total energy = 1293.5630 kcal/mol (1291.6376 without restraints) Performing minimization step: 3952. Total energy = 1293.5190 kcal/mol (1291.5938 without restraints) Performing minimization step: 3953. Total energy = 1293.4750 kcal/mol (1291.5501 without restraints) Performing minimization step: 3954. Total energy = 1293.4311 kcal/mol (1291.5063 without restraints) Performing minimization step: 3955. Total energy = 1293.3871 kcal/mol (1291.4626 without restraints) Performing minimization step: 3956. Total energy = 1293.3432 kcal/mol (1291.4188 without restraints) Performing minimization step: 3957. Total energy = 1293.2992 kcal/mol (1291.3751 without restraints) Performing minimization step: 3958. Total energy = 1293.2553 kcal/mol (1291.3314 without restraints) Performing minimization step: 3959. Total energy = 1293.2114 kcal/mol (1291.2877 without restraints) Performing minimization step: 3960. Total energy = 1293.1675 kcal/mol (1291.2441 without restraints) Performing minimization step: 3961. Total energy = 1293.1236 kcal/mol (1291.2004 without restraints) Performing minimization step: 3962. Total energy = 1293.0798 kcal/mol (1291.1568 without restraints) Performing minimization step: 3963. Total energy = 1293.0363 kcal/mol (1291.1136 without restraints) Performing minimization step: 3964. Total energy = 1292.9925 kcal/mol (1291.0700 without restraints) Performing minimization step: 3965. Total energy = 1292.9490 kcal/mol (1291.0266 without restraints) Performing minimization step: 3966. Total energy = 1292.9052 kcal/mol (1290.9830 without restraints) Performing minimization step: 3967. Total energy = 1292.8613 kcal/mol (1290.9394 without restraints) Performing minimization step: 3968. Total energy = 1292.8176 kcal/mol (1290.8959 without restraints) Performing minimization step: 3969. Total energy = 1292.7739 kcal/mol (1290.8524 without restraints) Performing minimization step: 3970. Total energy = 1292.7300 kcal/mol (1290.8086 without restraints) Performing minimization step: 3971. Total energy = 1292.6864 kcal/mol (1290.7653 without restraints) Performing minimization step: 3972. Total energy = 1292.6428 kcal/mol (1290.7219 without restraints) Performing minimization step: 3973. Total energy = 1292.5990 kcal/mol (1290.6782 without restraints) Performing minimization step: 3974. Total energy = 1292.5549 kcal/mol (1290.6344 without restraints) Performing minimization step: 3975. Total energy = 1292.5110 kcal/mol (1290.5908 without restraints) Performing minimization step: 3976. Total energy = 1292.4674 kcal/mol (1290.5474 without restraints) Performing minimization step: 3977. Total energy = 1292.4238 kcal/mol (1290.5042 without restraints) Performing minimization step: 3978. Total energy = 1292.3803 kcal/mol (1290.4608 without restraints) Performing minimization step: 3979. Total energy = 1292.3365 kcal/mol (1290.4172 without restraints) Performing minimization step: 3980. Total energy = 1292.2929 kcal/mol (1290.3738 without restraints) Performing minimization step: 3981. Total energy = 1292.2494 kcal/mol (1290.3305 without restraints) Performing minimization step: 3982. Total energy = 1292.2057 kcal/mol (1290.2869 without restraints) Performing minimization step: 3983. Total energy = 1292.1621 kcal/mol (1290.2436 without restraints) Performing minimization step: 3984. Total energy = 1292.1183 kcal/mol (1290.2000 without restraints) Performing minimization step: 3985. Total energy = 1292.0748 kcal/mol (1290.1567 without restraints) Performing minimization step: 3986. Total energy = 1292.0313 kcal/mol (1290.1135 without restraints) Performing minimization step: 3987. Total energy = 1291.9878 kcal/mol (1290.0702 without restraints) Performing minimization step: 3988. Total energy = 1291.9444 kcal/mol (1290.0269 without restraints) Performing minimization step: 3989. Total energy = 1291.9009 kcal/mol (1289.9837 without restraints) Performing minimization step: 3990. Total energy = 1291.8573 kcal/mol (1289.9403 without restraints) Performing minimization step: 3991. Total energy = 1291.8141 kcal/mol (1289.8973 without restraints) Performing minimization step: 3992. Total energy = 1291.7707 kcal/mol (1289.8541 without restraints) Performing minimization step: 3993. Total energy = 1291.7273 kcal/mol (1289.8109 without restraints) Performing minimization step: 3994. Total energy = 1291.6843 kcal/mol (1289.7683 without restraints) Performing minimization step: 3995. Total energy = 1291.6411 kcal/mol (1289.7252 without restraints) Performing minimization step: 3996. Total energy = 1291.5979 kcal/mol (1289.6822 without restraints) Performing minimization step: 3997. Total energy = 1291.5546 kcal/mol (1289.6390 without restraints) Performing minimization step: 3998. Total energy = 1291.5112 kcal/mol (1289.5959 without restraints) Performing minimization step: 3999. Total energy = 1291.4679 kcal/mol (1289.5528 without restraints) Performing minimization step: 4000. Total energy = 1291.4246 kcal/mol (1289.5097 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/f42e8b68/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 4001. Total energy = 1291.3814 kcal/mol (1289.4667 without restraints) Performing minimization step: 4002. Total energy = 1291.3381 kcal/mol (1289.4236 without restraints) Performing minimization step: 4003. Total energy = 1291.2949 kcal/mol (1289.3806 without restraints) Performing minimization step: 4004. Total energy = 1291.2516 kcal/mol (1289.3374 without restraints) Performing minimization step: 4005. Total energy = 1291.2083 kcal/mol (1289.2944 without restraints) Performing minimization step: 4006. Total energy = 1291.1654 kcal/mol (1289.2517 without restraints) Performing minimization step: 4007. Total energy = 1291.1222 kcal/mol (1289.2088 without restraints) Performing minimization step: 4008. Total energy = 1291.0790 kcal/mol (1289.1658 without restraints) Performing minimization step: 4009. Total energy = 1291.0360 kcal/mol (1289.1230 without restraints) Performing minimization step: 4010. Total energy = 1290.9927 kcal/mol (1289.0799 without restraints) Performing minimization step: 4011. Total energy = 1290.9497 kcal/mol (1289.0371 without restraints) Performing minimization step: 4012. Total energy = 1290.9063 kcal/mol (1288.9939 without restraints) Performing minimization step: 4013. Total energy = 1290.8632 kcal/mol (1288.9510 without restraints) Performing minimization step: 4014. Total energy = 1290.8199 kcal/mol (1288.9079 without restraints) Performing minimization step: 4015. Total energy = 1290.7767 kcal/mol (1288.8648 without restraints) Performing minimization step: 4016. Total energy = 1290.7335 kcal/mol (1288.8219 without restraints) Performing minimization step: 4017. Total energy = 1290.6907 kcal/mol (1288.7793 without restraints) Performing minimization step: 4018. Total energy = 1290.6476 kcal/mol (1288.7365 without restraints) Performing minimization step: 4019. Total energy = 1290.6044 kcal/mol (1288.6935 without restraints) Performing minimization step: 4020. Total energy = 1290.5614 kcal/mol (1288.6507 without restraints) Performing minimization step: 4021. Total energy = 1290.5185 kcal/mol (1288.6080 without restraints) Performing minimization step: 4022. Total energy = 1290.4756 kcal/mol (1288.5653 without restraints) Performing minimization step: 4023. Total energy = 1290.4326 kcal/mol (1288.5225 without restraints) Performing minimization step: 4024. Total energy = 1290.3897 kcal/mol (1288.4798 without restraints) Performing minimization step: 4025. Total energy = 1290.3467 kcal/mol (1288.4369 without restraints) Performing minimization step: 4026. Total energy = 1290.3038 kcal/mol (1288.3944 without restraints) Performing minimization step: 4027. Total energy = 1290.2612 kcal/mol (1288.3519 without restraints) Performing minimization step: 4028. Total energy = 1290.2186 kcal/mol (1288.3095 without restraints) Performing minimization step: 4029. Total energy = 1290.1758 kcal/mol (1288.2669 without restraints) Performing minimization step: 4030. Total energy = 1290.1329 kcal/mol (1288.2243 without restraints) Performing minimization step: 4031. Total energy = 1290.0901 kcal/mol (1288.1816 without restraints) Performing minimization step: 4032. Total energy = 1290.0474 kcal/mol (1288.1392 without restraints) Performing minimization step: 4033. Total energy = 1290.0047 kcal/mol (1288.0966 without restraints) Performing minimization step: 4034. Total energy = 1289.9619 kcal/mol (1288.0540 without restraints) Performing minimization step: 4035. Total energy = 1289.9192 kcal/mol (1288.0116 without restraints) Performing minimization step: 4036. Total energy = 1289.8766 kcal/mol (1287.9691 without restraints) Performing minimization step: 4037. Total energy = 1289.8338 kcal/mol (1287.9266 without restraints) Performing minimization step: 4038. Total energy = 1289.7911 kcal/mol (1287.8840 without restraints) Performing minimization step: 4039. Total energy = 1289.7484 kcal/mol (1287.8415 without restraints) Performing minimization step: 4040. Total energy = 1289.7056 kcal/mol (1287.7990 without restraints) Performing minimization step: 4041. Total energy = 1289.6629 kcal/mol (1287.7565 without restraints) Performing minimization step: 4042. Total energy = 1289.6203 kcal/mol (1287.7141 without restraints) Performing minimization step: 4043. Total energy = 1289.5776 kcal/mol (1287.6716 without restraints) Performing minimization step: 4044. Total energy = 1289.5351 kcal/mol (1287.6293 without restraints) Performing minimization step: 4045. Total energy = 1289.4925 kcal/mol (1287.5868 without restraints) Performing minimization step: 4046. Total energy = 1289.4499 kcal/mol (1287.5445 without restraints) Performing minimization step: 4047. Total energy = 1289.4071 kcal/mol (1287.5019 without restraints) Performing minimization step: 4048. Total energy = 1289.3645 kcal/mol (1287.4595 without restraints) Performing minimization step: 4049. Total energy = 1289.3219 kcal/mol (1287.4171 without restraints) Performing minimization step: 4050. Total energy = 1289.2794 kcal/mol (1287.3748 without restraints) Performing minimization step: 4051. Total energy = 1289.2371 kcal/mol (1287.3327 without restraints) Performing minimization step: 4052. Total energy = 1289.1945 kcal/mol (1287.2903 without restraints) Performing minimization step: 4053. Total energy = 1289.1519 kcal/mol (1287.2477 without restraints) Performing minimization step: 4054. Total energy = 1289.1093 kcal/mol (1287.2056 without restraints) Performing minimization step: 4055. Total energy = 1289.0669 kcal/mol (1287.1633 without restraints) Performing minimization step: 4056. Total energy = 1289.0244 kcal/mol (1287.1211 without restraints) Performing minimization step: 4057. Total energy = 1288.9820 kcal/mol (1287.0788 without restraints) Performing minimization step: 4058. Total energy = 1288.9393 kcal/mol (1287.0365 without restraints) Performing minimization step: 4059. Total energy = 1288.8970 kcal/mol (1286.9941 without restraints) Performing minimization step: 4060. Total energy = 1288.8544 kcal/mol (1286.9518 without restraints) Performing minimization step: 4061. Total energy = 1288.8121 kcal/mol (1286.9097 without restraints) Performing minimization step: 4062. Total energy = 1288.7697 kcal/mol (1286.8675 without restraints) Performing minimization step: 4063. Total energy = 1288.7275 kcal/mol (1286.8255 without restraints) Performing minimization step: 4064. Total energy = 1288.6852 kcal/mol (1286.7834 without restraints) Performing minimization step: 4065. Total energy = 1288.6428 kcal/mol (1286.7412 without restraints) Performing minimization step: 4066. Total energy = 1288.6004 kcal/mol (1286.6990 without restraints) Performing minimization step: 4067. Total energy = 1288.5585 kcal/mol (1286.6573 without restraints) Performing minimization step: 4068. Total energy = 1288.5162 kcal/mol (1286.6152 without restraints) Performing minimization step: 4069. Total energy = 1288.4739 kcal/mol (1286.5731 without restraints) Performing minimization step: 4070. Total energy = 1288.4316 kcal/mol (1286.5310 without restraints) Performing minimization step: 4071. Total energy = 1288.3895 kcal/mol (1286.4892 without restraints) Performing minimization step: 4072. Total energy = 1288.3473 kcal/mol (1286.4471 without restraints) Performing minimization step: 4073. Total energy = 1288.3051 kcal/mol (1286.4051 without restraints) Performing minimization step: 4074. Total energy = 1288.2629 kcal/mol (1286.3631 without restraints) Performing minimization step: 4075. Total energy = 1288.2207 kcal/mol (1286.3211 without restraints) Performing minimization step: 4076. Total energy = 1288.1785 kcal/mol (1286.2791 without restraints) Performing minimization step: 4077. Total energy = 1288.1363 kcal/mol (1286.2371 without restraints) Performing minimization step: 4078. Total energy = 1288.0941 kcal/mol (1286.1951 without restraints) Performing minimization step: 4079. Total energy = 1288.0520 kcal/mol (1286.1532 without restraints) Performing minimization step: 4080. Total energy = 1288.0098 kcal/mol (1286.1112 without restraints) Performing minimization step: 4081. Total energy = 1287.9677 kcal/mol (1286.0693 without restraints) Performing minimization step: 4082. Total energy = 1287.9256 kcal/mol (1286.0274 without restraints) Performing minimization step: 4083. Total energy = 1287.8835 kcal/mol (1285.9855 without restraints) Performing minimization step: 4084. Total energy = 1287.8414 kcal/mol (1285.9436 without restraints) Performing minimization step: 4085. Total energy = 1287.7994 kcal/mol (1285.9017 without restraints) Performing minimization step: 4086. Total energy = 1287.7573 kcal/mol (1285.8599 without restraints) Performing minimization step: 4087. Total energy = 1287.7153 kcal/mol (1285.8181 without restraints) Performing minimization step: 4088. Total energy = 1287.6735 kcal/mol (1285.7765 without restraints) Performing minimization step: 4089. Total energy = 1287.6316 kcal/mol (1285.7347 without restraints) Performing minimization step: 4090. Total energy = 1287.5898 kcal/mol (1285.6931 without restraints) Performing minimization step: 4091. Total energy = 1287.5476 kcal/mol (1285.6512 without restraints) Performing minimization step: 4092. Total energy = 1287.5059 kcal/mol (1285.6096 without restraints) Performing minimization step: 4093. Total energy = 1287.4639 kcal/mol (1285.5678 without restraints) Performing minimization step: 4094. Total energy = 1287.4221 kcal/mol (1285.5262 without restraints) Performing minimization step: 4095. Total energy = 1287.3802 kcal/mol (1285.4845 without restraints) Performing minimization step: 4096. Total energy = 1287.3382 kcal/mol (1285.4427 without restraints) Performing minimization step: 4097. Total energy = 1287.2964 kcal/mol (1285.4012 without restraints) Performing minimization step: 4098. Total energy = 1287.2546 kcal/mol (1285.3595 without restraints) Performing minimization step: 4099. Total energy = 1287.2127 kcal/mol (1285.3178 without restraints) Performing minimization step: 4100. Total energy = 1287.1709 kcal/mol (1285.2762 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/f42e8b68/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 4101. Total energy = 1287.1290 kcal/mol (1285.2345 without restraints) Performing minimization step: 4102. Total energy = 1287.0872 kcal/mol (1285.1929 without restraints) Performing minimization step: 4103. Total energy = 1287.0454 kcal/mol (1285.1513 without restraints) Performing minimization step: 4104. Total energy = 1287.0036 kcal/mol (1285.1097 without restraints) Performing minimization step: 4105. Total energy = 1286.9618 kcal/mol (1285.0680 without restraints) Performing minimization step: 4106. Total energy = 1286.9198 kcal/mol (1285.0263 without restraints) Performing minimization step: 4107. Total energy = 1286.8782 kcal/mol (1284.9849 without restraints) Performing minimization step: 4108. Total energy = 1286.8362 kcal/mol (1284.9431 without restraints) Performing minimization step: 4109. Total energy = 1286.7945 kcal/mol (1284.9016 without restraints) Performing minimization step: 4110. Total energy = 1286.7530 kcal/mol (1284.8602 without restraints) Performing minimization step: 4111. Total energy = 1286.7116 kcal/mol (1284.8190 without restraints) Performing minimization step: 4112. Total energy = 1286.6699 kcal/mol (1284.7775 without restraints) Performing minimization step: 4113. Total energy = 1286.6282 kcal/mol (1284.7360 without restraints) Performing minimization step: 4114. Total energy = 1286.5865 kcal/mol (1284.6945 without restraints) Performing minimization step: 4115. Total energy = 1286.5449 kcal/mol (1284.6531 without restraints) Performing minimization step: 4116. Total energy = 1286.5032 kcal/mol (1284.6116 without restraints) Performing minimization step: 4117. Total energy = 1286.4616 kcal/mol (1284.5702 without restraints) Performing minimization step: 4118. Total energy = 1286.4202 kcal/mol (1284.5290 without restraints) Performing minimization step: 4119. Total energy = 1286.3787 kcal/mol (1284.4876 without restraints) Performing minimization step: 4120. Total energy = 1286.3371 kcal/mol (1284.4463 without restraints) Performing minimization step: 4121. Total energy = 1286.2955 kcal/mol (1284.4049 without restraints) Performing minimization step: 4122. Total energy = 1286.2540 kcal/mol (1284.3635 without restraints) Performing minimization step: 4123. Total energy = 1286.2125 kcal/mol (1284.3222 without restraints) Performing minimization step: 4124. Total energy = 1286.1709 kcal/mol (1284.2809 without restraints) Performing minimization step: 4125. Total energy = 1286.1295 kcal/mol (1284.2396 without restraints) Performing minimization step: 4126. Total energy = 1286.0882 kcal/mol (1284.1985 without restraints) Performing minimization step: 4127. Total energy = 1286.0467 kcal/mol (1284.1572 without restraints) Performing minimization step: 4128. Total energy = 1286.0052 kcal/mol (1284.1160 without restraints) Performing minimization step: 4129. Total energy = 1285.9639 kcal/mol (1284.0747 without restraints) Performing minimization step: 4130. Total energy = 1285.9224 kcal/mol (1284.0335 without restraints) Performing minimization step: 4131. Total energy = 1285.8810 kcal/mol (1283.9923 without restraints) Performing minimization step: 4132. Total energy = 1285.8396 kcal/mol (1283.9510 without restraints) Performing minimization step: 4133. Total energy = 1285.7982 kcal/mol (1283.9098 without restraints) Performing minimization step: 4134. Total energy = 1285.7568 kcal/mol (1283.8687 without restraints) Performing minimization step: 4135. Total energy = 1285.7156 kcal/mol (1283.8278 without restraints) Performing minimization step: 4136. Total energy = 1285.6745 kcal/mol (1283.7866 without restraints) Performing minimization step: 4137. Total energy = 1285.6331 kcal/mol (1283.7455 without restraints) Performing minimization step: 4138. Total energy = 1285.5918 kcal/mol (1283.7044 without restraints) Performing minimization step: 4139. Total energy = 1285.5506 kcal/mol (1283.6635 without restraints) Performing minimization step: 4140. Total energy = 1285.5095 kcal/mol (1283.6224 without restraints) Performing minimization step: 4141. Total energy = 1285.4682 kcal/mol (1283.5814 without restraints) Performing minimization step: 4142. Total energy = 1285.4269 kcal/mol (1283.5402 without restraints) Performing minimization step: 4143. Total energy = 1285.3856 kcal/mol (1283.4992 without restraints) Performing minimization step: 4144. Total energy = 1285.3444 kcal/mol (1283.4581 without restraints) Performing minimization step: 4145. Total energy = 1285.3031 kcal/mol (1283.4169 without restraints) Performing minimization step: 4146. Total energy = 1285.2620 kcal/mol (1283.3761 without restraints) Performing minimization step: 4147. Total energy = 1285.2208 kcal/mol (1283.3351 without restraints) Performing minimization step: 4148. Total energy = 1285.1795 kcal/mol (1283.2939 without restraints) Performing minimization step: 4149. Total energy = 1285.1387 kcal/mol (1283.2534 without restraints) Performing minimization step: 4150. Total energy = 1285.0975 kcal/mol (1283.2124 without restraints) Performing minimization step: 4151. Total energy = 1285.0564 kcal/mol (1283.1714 without restraints) Performing minimization step: 4152. Total energy = 1285.0153 kcal/mol (1283.1305 without restraints) Performing minimization step: 4153. Total energy = 1284.9742 kcal/mol (1283.0896 without restraints) Performing minimization step: 4154. Total energy = 1284.9331 kcal/mol (1283.0487 without restraints) Performing minimization step: 4155. Total energy = 1284.8920 kcal/mol (1283.0078 without restraints) Performing minimization step: 4156. Total energy = 1284.8510 kcal/mol (1282.9669 without restraints) Performing minimization step: 4157. Total energy = 1284.8099 kcal/mol (1282.9260 without restraints) Performing minimization step: 4158. Total energy = 1284.7688 kcal/mol (1282.8852 without restraints) Performing minimization step: 4159. Total energy = 1284.7278 kcal/mol (1282.8443 without restraints) Performing minimization step: 4160. Total energy = 1284.6867 kcal/mol (1282.8034 without restraints) Performing minimization step: 4161. Total energy = 1284.6460 kcal/mol (1282.7628 without restraints) Performing minimization step: 4162. Total energy = 1284.6049 kcal/mol (1282.7220 without restraints) Performing minimization step: 4163. Total energy = 1284.5639 kcal/mol (1282.6812 without restraints) Performing minimization step: 4164. Total energy = 1284.5229 kcal/mol (1282.6404 without restraints) Performing minimization step: 4165. Total energy = 1284.4820 kcal/mol (1282.5996 without restraints) Performing minimization step: 4166. Total energy = 1284.4413 kcal/mol (1282.5591 without restraints) Performing minimization step: 4167. Total energy = 1284.4002 kcal/mol (1282.5181 without restraints) Performing minimization step: 4168. Total energy = 1284.3593 kcal/mol (1282.4775 without restraints) Performing minimization step: 4169. Total energy = 1284.3186 kcal/mol (1282.4370 without restraints) Performing minimization step: 4170. Total energy = 1284.2778 kcal/mol (1282.3963 without restraints) Performing minimization step: 4171. Total energy = 1284.2367 kcal/mol (1282.3555 without restraints) Performing minimization step: 4172. Total energy = 1284.1957 kcal/mol (1282.3146 without restraints) Performing minimization step: 4173. Total energy = 1284.1547 kcal/mol (1282.2738 without restraints) Performing minimization step: 4174. Total energy = 1284.1138 kcal/mol (1282.2331 without restraints) Performing minimization step: 4175. Total energy = 1284.0727 kcal/mol (1282.1922 without restraints) Performing minimization step: 4176. Total energy = 1284.0319 kcal/mol (1282.1516 without restraints) Performing minimization step: 4177. Total energy = 1283.9912 kcal/mol (1282.1110 without restraints) Performing minimization step: 4178. Total energy = 1283.9505 kcal/mol (1282.0705 without restraints) Performing minimization step: 4179. Total energy = 1283.9097 kcal/mol (1282.0299 without restraints) Performing minimization step: 4180. Total energy = 1283.8690 kcal/mol (1281.9894 without restraints) Performing minimization step: 4181. Total energy = 1283.8282 kcal/mol (1281.9488 without restraints) Performing minimization step: 4182. Total energy = 1283.7875 kcal/mol (1281.9083 without restraints) Performing minimization step: 4183. Total energy = 1283.7468 kcal/mol (1281.8678 without restraints) Performing minimization step: 4184. Total energy = 1283.7061 kcal/mol (1281.8273 without restraints) Performing minimization step: 4185. Total energy = 1283.6656 kcal/mol (1281.7870 without restraints) Performing minimization step: 4186. Total energy = 1283.6250 kcal/mol (1281.7465 without restraints) Performing minimization step: 4187. Total energy = 1283.5843 kcal/mol (1281.7060 without restraints) Performing minimization step: 4188. Total energy = 1283.5437 kcal/mol (1281.6656 without restraints) Performing minimization step: 4189. Total energy = 1283.5031 kcal/mol (1281.6251 without restraints) Performing minimization step: 4190. Total energy = 1283.4625 kcal/mol (1281.5847 without restraints) Performing minimization step: 4191. Total energy = 1283.4219 kcal/mol (1281.5443 without restraints) Performing minimization step: 4192. Total energy = 1283.3813 kcal/mol (1281.5039 without restraints) Performing minimization step: 4193. Total energy = 1283.3407 kcal/mol (1281.4635 without restraints) Performing minimization step: 4194. Total energy = 1283.3002 kcal/mol (1281.4231 without restraints) Performing minimization step: 4195. Total energy = 1283.2594 kcal/mol (1281.3825 without restraints) Performing minimization step: 4196. Total energy = 1283.2189 kcal/mol (1281.3422 without restraints) Performing minimization step: 4197. Total energy = 1283.1779 kcal/mol (1281.3014 without restraints) Performing minimization step: 4198. Total energy = 1283.1374 kcal/mol (1281.2611 without restraints) Performing minimization step: 4199. Total energy = 1283.0970 kcal/mol (1281.2208 without restraints) Performing minimization step: 4200. Total energy = 1283.0567 kcal/mol (1281.1807 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/f42e8b68/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 4201. Total energy = 1283.0165 kcal/mol (1281.1407 without restraints) Performing minimization step: 4202. Total energy = 1282.9760 kcal/mol (1281.1004 without restraints) Performing minimization step: 4203. Total energy = 1282.9356 kcal/mol (1281.0602 without restraints) Performing minimization step: 4204. Total energy = 1282.8952 kcal/mol (1281.0200 without restraints) Performing minimization step: 4205. Total energy = 1282.8548 kcal/mol (1280.9798 without restraints) Performing minimization step: 4206. Total energy = 1282.8144 kcal/mol (1280.9395 without restraints) Performing minimization step: 4207. Total energy = 1282.7740 kcal/mol (1280.8993 without restraints) Performing minimization step: 4208. Total energy = 1282.7336 kcal/mol (1280.8591 without restraints) Performing minimization step: 4209. Total energy = 1282.6933 kcal/mol (1280.8190 without restraints) Performing minimization step: 4210. Total energy = 1282.6529 kcal/mol (1280.7788 without restraints) Performing minimization step: 4211. Total energy = 1282.6126 kcal/mol (1280.7386 without restraints) Performing minimization step: 4212. Total energy = 1282.5723 kcal/mol (1280.6985 without restraints) Performing minimization step: 4213. Total energy = 1282.5320 kcal/mol (1280.6584 without restraints) Performing minimization step: 4214. Total energy = 1282.4916 kcal/mol (1280.6181 without restraints) Performing minimization step: 4215. Total energy = 1282.4514 kcal/mol (1280.5782 without restraints) Performing minimization step: 4216. Total energy = 1282.4110 kcal/mol (1280.5378 without restraints) Performing minimization step: 4217. Total energy = 1282.3706 kcal/mol (1280.4977 without restraints) Performing minimization step: 4218. Total energy = 1282.3304 kcal/mol (1280.4577 without restraints) Performing minimization step: 4219. Total energy = 1282.2902 kcal/mol (1280.4177 without restraints) Performing minimization step: 4220. Total energy = 1282.2500 kcal/mol (1280.3777 without restraints) Performing minimization step: 4221. Total energy = 1282.2097 kcal/mol (1280.3375 without restraints) Performing minimization step: 4222. Total energy = 1282.1695 kcal/mol (1280.2974 without restraints) Performing minimization step: 4223. Total energy = 1282.1293 kcal/mol (1280.2575 without restraints) Performing minimization step: 4224. Total energy = 1282.0890 kcal/mol (1280.2173 without restraints) Performing minimization step: 4225. Total energy = 1282.0486 kcal/mol (1280.1772 without restraints) Performing minimization step: 4226. Total energy = 1282.0085 kcal/mol (1280.1372 without restraints) Performing minimization step: 4227. Total energy = 1281.9684 kcal/mol (1280.0973 without restraints) Performing minimization step: 4228. Total energy = 1281.9283 kcal/mol (1280.0574 without restraints) Performing minimization step: 4229. Total energy = 1281.8883 kcal/mol (1280.0175 without restraints) Performing minimization step: 4230. Total energy = 1281.8485 kcal/mol (1279.9779 without restraints) Performing minimization step: 4231. Total energy = 1281.8084 kcal/mol (1279.9380 without restraints) Performing minimization step: 4232. Total energy = 1281.7684 kcal/mol (1279.8982 without restraints) Performing minimization step: 4233. Total energy = 1281.7282 kcal/mol (1279.8581 without restraints) Performing minimization step: 4234. Total energy = 1281.6884 kcal/mol (1279.8187 without restraints) Performing minimization step: 4235. Total energy = 1281.6486 kcal/mol (1279.7787 without restraints) Performing minimization step: 4236. Total energy = 1281.6084 kcal/mol (1279.7389 without restraints) Performing minimization step: 4237. Total energy = 1281.5684 kcal/mol (1279.6991 without restraints) Performing minimization step: 4238. Total energy = 1281.5285 kcal/mol (1279.6594 without restraints) Performing minimization step: 4239. Total energy = 1281.4882 kcal/mol (1279.6192 without restraints) Performing minimization step: 4240. Total energy = 1281.4482 kcal/mol (1279.5794 without restraints) Performing minimization step: 4241. Total energy = 1281.4083 kcal/mol (1279.5397 without restraints) Performing minimization step: 4242. Total energy = 1281.3687 kcal/mol (1279.5002 without restraints) Performing minimization step: 4243. Total energy = 1281.3288 kcal/mol (1279.4605 without restraints) Performing minimization step: 4244. Total energy = 1281.2891 kcal/mol (1279.4209 without restraints) Performing minimization step: 4245. Total energy = 1281.2490 kcal/mol (1279.3811 without restraints) Performing minimization step: 4246. Total energy = 1281.2089 kcal/mol (1279.3411 without restraints) Performing minimization step: 4247. Total energy = 1281.1691 kcal/mol (1279.3015 without restraints) Performing minimization step: 4248. Total energy = 1281.1294 kcal/mol (1279.2620 without restraints) Performing minimization step: 4249. Total energy = 1281.0896 kcal/mol (1279.2223 without restraints) Performing minimization step: 4250. Total energy = 1281.0494 kcal/mol (1279.1823 without restraints) Performing minimization step: 4251. Total energy = 1281.0097 kcal/mol (1279.1428 without restraints) Performing minimization step: 4252. Total energy = 1280.9699 kcal/mol (1279.1032 without restraints) Performing minimization step: 4253. Total energy = 1280.9302 kcal/mol (1279.0636 without restraints) Performing minimization step: 4254. Total energy = 1280.8905 kcal/mol (1279.0241 without restraints) Performing minimization step: 4255. Total energy = 1280.8510 kcal/mol (1278.9849 without restraints) Performing minimization step: 4256. Total energy = 1280.8117 kcal/mol (1278.9456 without restraints) Performing minimization step: 4257. Total energy = 1280.7720 kcal/mol (1278.9061 without restraints) Performing minimization step: 4258. Total energy = 1280.7323 kcal/mol (1278.8666 without restraints) Performing minimization step: 4259. Total energy = 1280.6927 kcal/mol (1278.8272 without restraints) Performing minimization step: 4260. Total energy = 1280.6528 kcal/mol (1278.7874 without restraints) Performing minimization step: 4261. Total energy = 1280.6131 kcal/mol (1278.7480 without restraints) Performing minimization step: 4262. Total energy = 1280.5735 kcal/mol (1278.7086 without restraints) Performing minimization step: 4263. Total energy = 1280.5339 kcal/mol (1278.6691 without restraints) Performing minimization step: 4264. Total energy = 1280.4944 kcal/mol (1278.6297 without restraints) Performing minimization step: 4265. Total energy = 1280.4548 kcal/mol (1278.5903 without restraints) Performing minimization step: 4266. Total energy = 1280.4152 kcal/mol (1278.5508 without restraints) Performing minimization step: 4267. Total energy = 1280.3753 kcal/mol (1278.5112 without restraints) Performing minimization step: 4268. Total energy = 1280.3358 kcal/mol (1278.4718 without restraints) Performing minimization step: 4269. Total energy = 1280.2964 kcal/mol (1278.4327 without restraints) Performing minimization step: 4270. Total energy = 1280.2570 kcal/mol (1278.3933 without restraints) Performing minimization step: 4271. Total energy = 1280.2174 kcal/mol (1278.3540 without restraints) Performing minimization step: 4272. Total energy = 1280.1775 kcal/mol (1278.3143 without restraints) Performing minimization step: 4273. Total energy = 1280.1381 kcal/mol (1278.2750 without restraints) Performing minimization step: 4274. Total energy = 1280.0986 kcal/mol (1278.2357 without restraints) Performing minimization step: 4275. Total energy = 1280.0592 kcal/mol (1278.1965 without restraints) Performing minimization step: 4276. Total energy = 1280.0198 kcal/mol (1278.1572 without restraints) Performing minimization step: 4277. Total energy = 1279.9804 kcal/mol (1278.1180 without restraints) Performing minimization step: 4278. Total energy = 1279.9410 kcal/mol (1278.0787 without restraints) Performing minimization step: 4279. Total energy = 1279.9014 kcal/mol (1278.0393 without restraints) Performing minimization step: 4280. Total energy = 1279.8620 kcal/mol (1278.0001 without restraints) Performing minimization step: 4281. Total energy = 1279.8227 kcal/mol (1277.9609 without restraints) Performing minimization step: 4282. Total energy = 1279.7833 kcal/mol (1277.9217 without restraints) Performing minimization step: 4283. Total energy = 1279.7440 kcal/mol (1277.8826 without restraints) Performing minimization step: 4284. Total energy = 1279.7046 kcal/mol (1277.8433 without restraints) Performing minimization step: 4285. Total energy = 1279.6652 kcal/mol (1277.8041 without restraints) Performing minimization step: 4286. Total energy = 1279.6258 kcal/mol (1277.7650 without restraints) Performing minimization step: 4287. Total energy = 1279.5866 kcal/mol (1277.7259 without restraints) Performing minimization step: 4288. Total energy = 1279.5473 kcal/mol (1277.6868 without restraints) Performing minimization step: 4289. Total energy = 1279.5081 kcal/mol (1277.6477 without restraints) Performing minimization step: 4290. Total energy = 1279.4688 kcal/mol (1277.6086 without restraints) Performing minimization step: 4291. Total energy = 1279.4296 kcal/mol (1277.5696 without restraints) Performing minimization step: 4292. Total energy = 1279.3904 kcal/mol (1277.5305 without restraints) Performing minimization step: 4293. Total energy = 1279.3512 kcal/mol (1277.4915 without restraints) Performing minimization step: 4294. Total energy = 1279.3120 kcal/mol (1277.4525 without restraints) Performing minimization step: 4295. Total energy = 1279.2728 kcal/mol (1277.4135 without restraints) Performing minimization step: 4296. Total energy = 1279.2337 kcal/mol (1277.3745 without restraints) Performing minimization step: 4297. Total energy = 1279.1945 kcal/mol (1277.3355 without restraints) Performing minimization step: 4298. Total energy = 1279.1556 kcal/mol (1277.2968 without restraints) Performing minimization step: 4299. Total energy = 1279.1168 kcal/mol (1277.2582 without restraints) Performing minimization step: 4300. Total energy = 1279.0778 kcal/mol (1277.2193 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/f42e8b68/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 4301. Total energy = 1279.0388 kcal/mol (1277.1804 without restraints) Performing minimization step: 4302. Total energy = 1278.9997 kcal/mol (1277.1415 without restraints) Performing minimization step: 4303. Total energy = 1278.9606 kcal/mol (1277.1026 without restraints) Performing minimization step: 4304. Total energy = 1278.9215 kcal/mol (1277.0637 without restraints) Performing minimization step: 4305. Total energy = 1278.8827 kcal/mol (1277.0251 without restraints) Performing minimization step: 4306. Total energy = 1278.8438 kcal/mol (1276.9863 without restraints) Performing minimization step: 4307. Total energy = 1278.8046 kcal/mol (1276.9473 without restraints) Performing minimization step: 4308. Total energy = 1278.7655 kcal/mol (1276.9084 without restraints) Performing minimization step: 4309. Total energy = 1278.7266 kcal/mol (1276.8696 without restraints) Performing minimization step: 4310. Total energy = 1278.6876 kcal/mol (1276.8308 without restraints) Performing minimization step: 4311. Total energy = 1278.6486 kcal/mol (1276.7920 without restraints) Performing minimization step: 4312. Total energy = 1278.6097 kcal/mol (1276.7533 without restraints) Performing minimization step: 4313. Total energy = 1278.5708 kcal/mol (1276.7145 without restraints) Performing minimization step: 4314. Total energy = 1278.5319 kcal/mol (1276.6758 without restraints) Performing minimization step: 4315. Total energy = 1278.4930 kcal/mol (1276.6371 without restraints) Performing minimization step: 4316. Total energy = 1278.4541 kcal/mol (1276.5984 without restraints) Performing minimization step: 4317. Total energy = 1278.4150 kcal/mol (1276.5594 without restraints) Performing minimization step: 4318. Total energy = 1278.3762 kcal/mol (1276.5207 without restraints) Performing minimization step: 4319. Total energy = 1278.3376 kcal/mol (1276.4823 without restraints) Performing minimization step: 4320. Total energy = 1278.2988 kcal/mol (1276.4436 without restraints) Performing minimization step: 4321. Total energy = 1278.2600 kcal/mol (1276.4050 without restraints) Performing minimization step: 4322. Total energy = 1278.2212 kcal/mol (1276.3664 without restraints) Performing minimization step: 4323. Total energy = 1278.1824 kcal/mol (1276.3278 without restraints) Performing minimization step: 4324. Total energy = 1278.1436 kcal/mol (1276.2892 without restraints) Performing minimization step: 4325. Total energy = 1278.1047 kcal/mol (1276.2503 without restraints) Performing minimization step: 4326. Total energy = 1278.0658 kcal/mol (1276.2117 without restraints) Performing minimization step: 4327. Total energy = 1278.0271 kcal/mol (1276.1731 without restraints) Performing minimization step: 4328. Total energy = 1277.9884 kcal/mol (1276.1346 without restraints) Performing minimization step: 4329. Total energy = 1277.9497 kcal/mol (1276.0960 without restraints) Performing minimization step: 4330. Total energy = 1277.9110 kcal/mol (1276.0575 without restraints) Performing minimization step: 4331. Total energy = 1277.8725 kcal/mol (1276.0192 without restraints) Performing minimization step: 4332. Total energy = 1277.8336 kcal/mol (1275.9805 without restraints) Performing minimization step: 4333. Total energy = 1277.7950 kcal/mol (1275.9420 without restraints) Performing minimization step: 4334. Total energy = 1277.7564 kcal/mol (1275.9037 without restraints) Performing minimization step: 4335. Total energy = 1277.7181 kcal/mol (1275.8654 without restraints) Performing minimization step: 4336. Total energy = 1277.6795 kcal/mol (1275.8270 without restraints) Performing minimization step: 4337. Total energy = 1277.6409 kcal/mol (1275.7886 without restraints) Performing minimization step: 4338. Total energy = 1277.6023 kcal/mol (1275.7502 without restraints) Performing minimization step: 4339. Total energy = 1277.5637 kcal/mol (1275.7118 without restraints) Performing minimization step: 4340. Total energy = 1277.5252 kcal/mol (1275.6734 without restraints) Performing minimization step: 4341. Total energy = 1277.4867 kcal/mol (1275.6350 without restraints) Performing minimization step: 4342. Total energy = 1277.4481 kcal/mol (1275.5967 without restraints) Performing minimization step: 4343. Total energy = 1277.4096 kcal/mol (1275.5583 without restraints) Performing minimization step: 4344. Total energy = 1277.3711 kcal/mol (1275.5200 without restraints) Performing minimization step: 4345. Total energy = 1277.3325 kcal/mol (1275.4815 without restraints) Performing minimization step: 4346. Total energy = 1277.2940 kcal/mol (1275.4432 without restraints) Performing minimization step: 4347. Total energy = 1277.2556 kcal/mol (1275.4049 without restraints) Performing minimization step: 4348. Total energy = 1277.2171 kcal/mol (1275.3666 without restraints) Performing minimization step: 4349. Total energy = 1277.1787 kcal/mol (1275.3284 without restraints) Performing minimization step: 4350. Total energy = 1277.1403 kcal/mol (1275.2901 without restraints) Performing minimization step: 4351. Total energy = 1277.1019 kcal/mol (1275.2519 without restraints) Performing minimization step: 4352. Total energy = 1277.0636 kcal/mol (1275.2138 without restraints) Performing minimization step: 4353. Total energy = 1277.0253 kcal/mol (1275.1756 without restraints) Performing minimization step: 4354. Total energy = 1276.9869 kcal/mol (1275.1374 without restraints) Performing minimization step: 4355. Total energy = 1276.9486 kcal/mol (1275.0992 without restraints) Performing minimization step: 4356. Total energy = 1276.9102 kcal/mol (1275.0610 without restraints) Performing minimization step: 4357. Total energy = 1276.8719 kcal/mol (1275.0229 without restraints) Performing minimization step: 4358. Total energy = 1276.8336 kcal/mol (1274.9847 without restraints) Performing minimization step: 4359. Total energy = 1276.7952 kcal/mol (1274.9466 without restraints) Performing minimization step: 4360. Total energy = 1276.7569 kcal/mol (1274.9084 without restraints) Performing minimization step: 4361. Total energy = 1276.7187 kcal/mol (1274.8703 without restraints) Performing minimization step: 4362. Total energy = 1276.6804 kcal/mol (1274.8322 without restraints) Performing minimization step: 4363. Total energy = 1276.6421 kcal/mol (1274.7941 without restraints) Performing minimization step: 4364. Total energy = 1276.6039 kcal/mol (1274.7560 without restraints) Performing minimization step: 4365. Total energy = 1276.5657 kcal/mol (1274.7180 without restraints) Performing minimization step: 4366. Total energy = 1276.5276 kcal/mol (1274.6801 without restraints) Performing minimization step: 4367. Total energy = 1276.4895 kcal/mol (1274.6421 without restraints) Performing minimization step: 4368. Total energy = 1276.4513 kcal/mol (1274.6040 without restraints) Performing minimization step: 4369. Total energy = 1276.4131 kcal/mol (1274.5660 without restraints) Performing minimization step: 4370. Total energy = 1276.3748 kcal/mol (1274.5278 without restraints) Performing minimization step: 4371. Total energy = 1276.3366 kcal/mol (1274.4898 without restraints) Performing minimization step: 4372. Total energy = 1276.2989 kcal/mol (1274.4523 without restraints) Performing minimization step: 4373. Total energy = 1276.2614 kcal/mol (1274.4150 without restraints) Performing minimization step: 4374. Total energy = 1276.2233 kcal/mol (1274.3771 without restraints) Performing minimization step: 4375. Total energy = 1276.1852 kcal/mol (1274.3391 without restraints) Performing minimization step: 4376. Total energy = 1276.1471 kcal/mol (1274.3012 without restraints) Performing minimization step: 4377. Total energy = 1276.1093 kcal/mol (1274.2635 without restraints) Performing minimization step: 4378. Total energy = 1276.0712 kcal/mol (1274.2256 without restraints) Performing minimization step: 4379. Total energy = 1276.0336 kcal/mol (1274.1882 without restraints) Performing minimization step: 4380. Total energy = 1275.9956 kcal/mol (1274.1503 without restraints) Performing minimization step: 4381. Total energy = 1275.9577 kcal/mol (1274.1127 without restraints) Performing minimization step: 4382. Total energy = 1275.9197 kcal/mol (1274.0748 without restraints) Performing minimization step: 4383. Total energy = 1275.8818 kcal/mol (1274.0369 without restraints) Performing minimization step: 4384. Total energy = 1275.8439 kcal/mol (1273.9993 without restraints) Performing minimization step: 4385. Total energy = 1275.8058 kcal/mol (1273.9613 without restraints) Performing minimization step: 4386. Total energy = 1275.7678 kcal/mol (1273.9235 without restraints) Performing minimization step: 4387. Total energy = 1275.7300 kcal/mol (1273.8858 without restraints) Performing minimization step: 4388. Total energy = 1275.6920 kcal/mol (1273.8480 without restraints) Performing minimization step: 4389. Total energy = 1275.6541 kcal/mol (1273.8103 without restraints) Performing minimization step: 4390. Total energy = 1275.6159 kcal/mol (1273.7722 without restraints) Performing minimization step: 4391. Total energy = 1275.5782 kcal/mol (1273.7346 without restraints) Performing minimization step: 4392. Total energy = 1275.5403 kcal/mol (1273.6969 without restraints) Performing minimization step: 4393. Total energy = 1275.5024 kcal/mol (1273.6592 without restraints) Performing minimization step: 4394. Total energy = 1275.4647 kcal/mol (1273.6216 without restraints) Performing minimization step: 4395. Total energy = 1275.4270 kcal/mol (1273.5841 without restraints) Performing minimization step: 4396. Total energy = 1275.3892 kcal/mol (1273.5465 without restraints) Performing minimization step: 4397. Total energy = 1275.3516 kcal/mol (1273.5090 without restraints) Performing minimization step: 4398. Total energy = 1275.3142 kcal/mol (1273.4718 without restraints) Performing minimization step: 4399. Total energy = 1275.2764 kcal/mol (1273.4342 without restraints) Performing minimization step: 4400. Total energy = 1275.2387 kcal/mol (1273.3966 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/f42e8b68/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 4401. Total energy = 1275.2010 kcal/mol (1273.3590 without restraints) Performing minimization step: 4402. Total energy = 1275.1633 kcal/mol (1273.3216 without restraints) Performing minimization step: 4403. Total energy = 1275.1259 kcal/mol (1273.2843 without restraints) Performing minimization step: 4404. Total energy = 1275.0882 kcal/mol (1273.2468 without restraints) Performing minimization step: 4405. Total energy = 1275.0506 kcal/mol (1273.2094 without restraints) Performing minimization step: 4406. Total energy = 1275.0128 kcal/mol (1273.1717 without restraints) Performing minimization step: 4407. Total energy = 1274.9748 kcal/mol (1273.1337 without restraints) Performing minimization step: 4408. Total energy = 1274.9370 kcal/mol (1273.0962 without restraints) Performing minimization step: 4409. Total energy = 1274.8993 kcal/mol (1273.0587 without restraints) Performing minimization step: 4410. Total energy = 1274.8617 kcal/mol (1273.0212 without restraints) Performing minimization step: 4411. Total energy = 1274.8241 kcal/mol (1272.9837 without restraints) Performing minimization step: 4412. Total energy = 1274.7864 kcal/mol (1272.9462 without restraints) Performing minimization step: 4413. Total energy = 1274.7488 kcal/mol (1272.9087 without restraints) Performing minimization step: 4414. Total energy = 1274.7112 kcal/mol (1272.8713 without restraints) Performing minimization step: 4415. Total energy = 1274.6735 kcal/mol (1272.8337 without restraints) Performing minimization step: 4416. Total energy = 1274.6358 kcal/mol (1272.7963 without restraints) Performing minimization step: 4417. Total energy = 1274.5984 kcal/mol (1272.7591 without restraints) Performing minimization step: 4418. Total energy = 1274.5610 kcal/mol (1272.7217 without restraints) Performing minimization step: 4419. Total energy = 1274.5234 kcal/mol (1272.6843 without restraints) Performing minimization step: 4420. Total energy = 1274.4859 kcal/mol (1272.6470 without restraints) Performing minimization step: 4421. Total energy = 1274.4486 kcal/mol (1272.6099 without restraints) Performing minimization step: 4422. Total energy = 1274.4111 kcal/mol (1272.5725 without restraints) Performing minimization step: 4423. Total energy = 1274.3737 kcal/mol (1272.5353 without restraints) Performing minimization step: 4424. Total energy = 1274.3364 kcal/mol (1272.4981 without restraints) Performing minimization step: 4425. Total energy = 1274.2990 kcal/mol (1272.4608 without restraints) Performing minimization step: 4426. Total energy = 1274.2617 kcal/mol (1272.4238 without restraints) Performing minimization step: 4427. Total energy = 1274.2245 kcal/mol (1272.3867 without restraints) Performing minimization step: 4428. Total energy = 1274.1874 kcal/mol (1272.3497 without restraints) Performing minimization step: 4429. Total energy = 1274.1500 kcal/mol (1272.3125 without restraints) Performing minimization step: 4430. Total energy = 1274.1125 kcal/mol (1272.2752 without restraints) Performing minimization step: 4431. Total energy = 1274.0752 kcal/mol (1272.2380 without restraints) Performing minimization step: 4432. Total energy = 1274.0378 kcal/mol (1272.2008 without restraints) Performing minimization step: 4433. Total energy = 1274.0005 kcal/mol (1272.1636 without restraints) Performing minimization step: 4434. Total energy = 1273.9633 kcal/mol (1272.1266 without restraints) Performing minimization step: 4435. Total energy = 1273.9262 kcal/mol (1272.0897 without restraints) Performing minimization step: 4436. Total energy = 1273.8889 kcal/mol (1272.0525 without restraints) Performing minimization step: 4437. Total energy = 1273.8516 kcal/mol (1272.0154 without restraints) Performing minimization step: 4438. Total energy = 1273.8143 kcal/mol (1271.9782 without restraints) Performing minimization step: 4439. Total energy = 1273.7770 kcal/mol (1271.9411 without restraints) Performing minimization step: 4440. Total energy = 1273.7398 kcal/mol (1271.9040 without restraints) Performing minimization step: 4441. Total energy = 1273.7025 kcal/mol (1271.8669 without restraints) Performing minimization step: 4442. Total energy = 1273.6652 kcal/mol (1271.8297 without restraints) Performing minimization step: 4443. Total energy = 1273.6279 kcal/mol (1271.7926 without restraints) Performing minimization step: 4444. Total energy = 1273.5907 kcal/mol (1271.7555 without restraints) Performing minimization step: 4445. Total energy = 1273.5534 kcal/mol (1271.7185 without restraints) Performing minimization step: 4446. Total energy = 1273.5164 kcal/mol (1271.6815 without restraints) Performing minimization step: 4447. Total energy = 1273.4792 kcal/mol (1271.6445 without restraints) Performing minimization step: 4448. Total energy = 1273.4421 kcal/mol (1271.6075 without restraints) Performing minimization step: 4449. Total energy = 1273.4046 kcal/mol (1271.5701 without restraints) Performing minimization step: 4450. Total energy = 1273.3674 kcal/mol (1271.5331 without restraints) Performing minimization step: 4451. Total energy = 1273.3303 kcal/mol (1271.4962 without restraints) Performing minimization step: 4452. Total energy = 1273.2932 kcal/mol (1271.4593 without restraints) Performing minimization step: 4453. Total energy = 1273.2561 kcal/mol (1271.4224 without restraints) Performing minimization step: 4454. Total energy = 1273.2191 kcal/mol (1271.3855 without restraints) Performing minimization step: 4455. Total energy = 1273.1820 kcal/mol (1271.3486 without restraints) Performing minimization step: 4456. Total energy = 1273.1450 kcal/mol (1271.3117 without restraints) Performing minimization step: 4457. Total energy = 1273.1083 kcal/mol (1271.2751 without restraints) Performing minimization step: 4458. Total energy = 1273.0715 kcal/mol (1271.2384 without restraints) Performing minimization step: 4459. Total energy = 1273.0344 kcal/mol (1271.2016 without restraints) Performing minimization step: 4460. Total energy = 1272.9974 kcal/mol (1271.1647 without restraints) Performing minimization step: 4461. Total energy = 1272.9604 kcal/mol (1271.1279 without restraints) Performing minimization step: 4462. Total energy = 1272.9235 kcal/mol (1271.0910 without restraints) Performing minimization step: 4463. Total energy = 1272.8865 kcal/mol (1271.0542 without restraints) Performing minimization step: 4464. Total energy = 1272.8493 kcal/mol (1271.0172 without restraints) Performing minimization step: 4465. Total energy = 1272.8123 kcal/mol (1270.9802 without restraints) Performing minimization step: 4466. Total energy = 1272.7752 kcal/mol (1270.9434 without restraints) Performing minimization step: 4467. Total energy = 1272.7383 kcal/mol (1270.9066 without restraints) Performing minimization step: 4468. Total energy = 1272.7014 kcal/mol (1270.8699 without restraints) Performing minimization step: 4469. Total energy = 1272.6645 kcal/mol (1270.8331 without restraints) Performing minimization step: 4470. Total energy = 1272.6276 kcal/mol (1270.7964 without restraints) Performing minimization step: 4471. Total energy = 1272.5908 kcal/mol (1270.7597 without restraints) Performing minimization step: 4472. Total energy = 1272.5537 kcal/mol (1270.7228 without restraints) Performing minimization step: 4473. Total energy = 1272.5168 kcal/mol (1270.6861 without restraints) Performing minimization step: 4474. Total energy = 1272.4800 kcal/mol (1270.6494 without restraints) Performing minimization step: 4475. Total energy = 1272.4429 kcal/mol (1270.6125 without restraints) Performing minimization step: 4476. Total energy = 1272.4061 kcal/mol (1270.5759 without restraints) Performing minimization step: 4477. Total energy = 1272.3693 kcal/mol (1270.5392 without restraints) Performing minimization step: 4478. Total energy = 1272.3326 kcal/mol (1270.5026 without restraints) Performing minimization step: 4479. Total energy = 1272.2957 kcal/mol (1270.4659 without restraints) Performing minimization step: 4480. Total energy = 1272.2588 kcal/mol (1270.4291 without restraints) Performing minimization step: 4481. Total energy = 1272.2221 kcal/mol (1270.3926 without restraints) Performing minimization step: 4482. Total energy = 1272.1855 kcal/mol (1270.3562 without restraints) Performing minimization step: 4483. Total energy = 1272.1491 kcal/mol (1270.3198 without restraints) Performing minimization step: 4484. Total energy = 1272.1126 kcal/mol (1270.2835 without restraints) Performing minimization step: 4485. Total energy = 1272.0755 kcal/mol (1270.2466 without restraints) Performing minimization step: 4486. Total energy = 1272.0388 kcal/mol (1270.2100 without restraints) Performing minimization step: 4487. Total energy = 1272.0023 kcal/mol (1270.1739 without restraints) Performing minimization step: 4488. Total energy = 1271.9660 kcal/mol (1270.1376 without restraints) Performing minimization step: 4489. Total energy = 1271.9291 kcal/mol (1270.1006 without restraints) Performing minimization step: 4490. Total energy = 1271.8923 kcal/mol (1270.0641 without restraints) Performing minimization step: 4491. Total energy = 1271.8557 kcal/mol (1270.0277 without restraints) Performing minimization step: 4492. Total energy = 1271.8190 kcal/mol (1269.9912 without restraints) Performing minimization step: 4493. Total energy = 1271.7824 kcal/mol (1269.9547 without restraints) Performing minimization step: 4494. Total energy = 1271.7459 kcal/mol (1269.9183 without restraints) Performing minimization step: 4495. Total energy = 1271.7093 kcal/mol (1269.8819 without restraints) Performing minimization step: 4496. Total energy = 1271.6727 kcal/mol (1269.8455 without restraints) Performing minimization step: 4497. Total energy = 1271.6361 kcal/mol (1269.8090 without restraints) Performing minimization step: 4498. Total energy = 1271.5996 kcal/mol (1269.7726 without restraints) Performing minimization step: 4499. Total energy = 1271.5630 kcal/mol (1269.7362 without restraints) Performing minimization step: 4500. Total energy = 1271.5263 kcal/mol (1269.6997 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/f42e8b68/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 4501. Total energy = 1271.4898 kcal/mol (1269.6633 without restraints) Performing minimization step: 4502. Total energy = 1271.4534 kcal/mol (1269.6270 without restraints) Performing minimization step: 4503. Total energy = 1271.4171 kcal/mol (1269.5909 without restraints) Performing minimization step: 4504. Total energy = 1271.3806 kcal/mol (1269.5546 without restraints) Performing minimization step: 4505. Total energy = 1271.3446 kcal/mol (1269.5187 without restraints) Performing minimization step: 4506. Total energy = 1271.3081 kcal/mol (1269.4823 without restraints) Performing minimization step: 4507. Total energy = 1271.2716 kcal/mol (1269.4461 without restraints) Performing minimization step: 4508. Total energy = 1271.2353 kcal/mol (1269.4098 without restraints) Performing minimization step: 4509. Total energy = 1271.1987 kcal/mol (1269.3733 without restraints) Performing minimization step: 4510. Total energy = 1271.1618 kcal/mol (1269.3366 without restraints) Performing minimization step: 4511. Total energy = 1271.1254 kcal/mol (1269.3004 without restraints) Performing minimization step: 4512. Total energy = 1271.0890 kcal/mol (1269.2642 without restraints) Performing minimization step: 4513. Total energy = 1271.0527 kcal/mol (1269.2280 without restraints) Performing minimization step: 4514. Total energy = 1271.0163 kcal/mol (1269.1918 without restraints) Performing minimization step: 4515. Total energy = 1270.9798 kcal/mol (1269.1554 without restraints) Performing minimization step: 4516. Total energy = 1270.9435 kcal/mol (1269.1192 without restraints) Performing minimization step: 4517. Total energy = 1270.9073 kcal/mol (1269.0833 without restraints) Performing minimization step: 4518. Total energy = 1270.8715 kcal/mol (1269.0475 without restraints) Performing minimization step: 4519. Total energy = 1270.8352 kcal/mol (1269.0114 without restraints) Performing minimization step: 4520. Total energy = 1270.7989 kcal/mol (1268.9752 without restraints) Performing minimization step: 4521. Total energy = 1270.7627 kcal/mol (1268.9392 without restraints) Performing minimization step: 4522. Total energy = 1270.7264 kcal/mol (1268.9031 without restraints) Performing minimization step: 4523. Total energy = 1270.6904 kcal/mol (1268.8672 without restraints) Performing minimization step: 4524. Total energy = 1270.6542 kcal/mol (1268.8311 without restraints) Performing minimization step: 4525. Total energy = 1270.6179 kcal/mol (1268.7950 without restraints) Performing minimization step: 4526. Total energy = 1270.5818 kcal/mol (1268.7590 without restraints) Performing minimization step: 4527. Total energy = 1270.5456 kcal/mol (1268.7230 without restraints) Performing minimization step: 4528. Total energy = 1270.5095 kcal/mol (1268.6870 without restraints) Performing minimization step: 4529. Total energy = 1270.4734 kcal/mol (1268.6510 without restraints) Performing minimization step: 4530. Total energy = 1270.4370 kcal/mol (1268.6148 without restraints) Performing minimization step: 4531. Total energy = 1270.4008 kcal/mol (1268.5788 without restraints) Performing minimization step: 4532. Total energy = 1270.3647 kcal/mol (1268.5428 without restraints) Performing minimization step: 4533. Total energy = 1270.3290 kcal/mol (1268.5073 without restraints) Performing minimization step: 4534. Total energy = 1270.2929 kcal/mol (1268.4713 without restraints) Performing minimization step: 4535. Total energy = 1270.2570 kcal/mol (1268.4356 without restraints) Performing minimization step: 4536. Total energy = 1270.2208 kcal/mol (1268.3995 without restraints) Performing minimization step: 4537. Total energy = 1270.1847 kcal/mol (1268.3635 without restraints) Performing minimization step: 4538. Total energy = 1270.1486 kcal/mol (1268.3276 without restraints) Performing minimization step: 4539. Total energy = 1270.1126 kcal/mol (1268.2917 without restraints) Performing minimization step: 4540. Total energy = 1270.0768 kcal/mol (1268.2561 without restraints) Performing minimization step: 4541. Total energy = 1270.0410 kcal/mol (1268.2204 without restraints) Performing minimization step: 4542. Total energy = 1270.0050 kcal/mol (1268.1845 without restraints) Performing minimization step: 4543. Total energy = 1269.9687 kcal/mol (1268.1485 without restraints) Performing minimization step: 4544. Total energy = 1269.9327 kcal/mol (1268.1126 without restraints) Performing minimization step: 4545. Total energy = 1269.8968 kcal/mol (1268.0768 without restraints) Performing minimization step: 4546. Total energy = 1269.8610 kcal/mol (1268.0413 without restraints) Performing minimization step: 4547. Total energy = 1269.8254 kcal/mol (1268.0057 without restraints) Performing minimization step: 4548. Total energy = 1269.7894 kcal/mol (1267.9699 without restraints) Performing minimization step: 4549. Total energy = 1269.7533 kcal/mol (1267.9339 without restraints) Performing minimization step: 4550. Total energy = 1269.7178 kcal/mol (1267.8985 without restraints) Performing minimization step: 4551. Total energy = 1269.6819 kcal/mol (1267.8628 without restraints) Performing minimization step: 4552. Total energy = 1269.6460 kcal/mol (1267.8270 without restraints) Performing minimization step: 4553. Total energy = 1269.6101 kcal/mol (1267.7913 without restraints) Performing minimization step: 4554. Total energy = 1269.5744 kcal/mol (1267.7558 without restraints) Performing minimization step: 4555. Total energy = 1269.5386 kcal/mol (1267.7201 without restraints) Performing minimization step: 4556. Total energy = 1269.5030 kcal/mol (1267.6846 without restraints) Performing minimization step: 4557. Total energy = 1269.4671 kcal/mol (1267.6489 without restraints) Performing minimization step: 4558. Total energy = 1269.4314 kcal/mol (1267.6134 without restraints) Performing minimization step: 4559. Total energy = 1269.3957 kcal/mol (1267.5778 without restraints) Performing minimization step: 4560. Total energy = 1269.3599 kcal/mol (1267.5421 without restraints) Performing minimization step: 4561. Total energy = 1269.3241 kcal/mol (1267.5065 without restraints) Performing minimization step: 4562. Total energy = 1269.2884 kcal/mol (1267.4709 without restraints) Performing minimization step: 4563. Total energy = 1269.2526 kcal/mol (1267.4353 without restraints) Performing minimization step: 4564. Total energy = 1269.2167 kcal/mol (1267.3995 without restraints) Performing minimization step: 4565. Total energy = 1269.1809 kcal/mol (1267.3639 without restraints) Performing minimization step: 4566. Total energy = 1269.1454 kcal/mol (1267.3285 without restraints) Performing minimization step: 4567. Total energy = 1269.1097 kcal/mol (1267.2929 without restraints) Performing minimization step: 4568. Total energy = 1269.0740 kcal/mol (1267.2574 without restraints) Performing minimization step: 4569. Total energy = 1269.0383 kcal/mol (1267.2218 without restraints) Performing minimization step: 4570. Total energy = 1269.0026 kcal/mol (1267.1862 without restraints) Performing minimization step: 4571. Total energy = 1268.9667 kcal/mol (1267.1505 without restraints) Performing minimization step: 4572. Total energy = 1268.9311 kcal/mol (1267.1152 without restraints) Performing minimization step: 4573. Total energy = 1268.8957 kcal/mol (1267.0800 without restraints) Performing minimization step: 4574. Total energy = 1268.8602 kcal/mol (1267.0445 without restraints) Performing minimization step: 4575. Total energy = 1268.8246 kcal/mol (1267.0090 without restraints) Performing minimization step: 4576. Total energy = 1268.7887 kcal/mol (1266.9733 without restraints) Performing minimization step: 4577. Total energy = 1268.7531 kcal/mol (1266.9378 without restraints) Performing minimization step: 4578. Total energy = 1268.7176 kcal/mol (1266.9026 without restraints) Performing minimization step: 4579. Total energy = 1268.6826 kcal/mol (1266.8675 without restraints) Performing minimization step: 4580. Total energy = 1268.6470 kcal/mol (1266.8321 without restraints) Performing minimization step: 4581. Total energy = 1268.6113 kcal/mol (1266.7967 without restraints) Performing minimization step: 4582. Total energy = 1268.5759 kcal/mol (1266.7613 without restraints) Performing minimization step: 4583. Total energy = 1268.5404 kcal/mol (1266.7259 without restraints) Performing minimization step: 4584. Total energy = 1268.5048 kcal/mol (1266.6905 without restraints) Performing minimization step: 4585. Total energy = 1268.4695 kcal/mol (1266.6554 without restraints) Performing minimization step: 4586. Total energy = 1268.4340 kcal/mol (1266.6200 without restraints) Performing minimization step: 4587. Total energy = 1268.3986 kcal/mol (1266.5847 without restraints) Performing minimization step: 4588. Total energy = 1268.3631 kcal/mol (1266.5493 without restraints) Performing minimization step: 4589. Total energy = 1268.3277 kcal/mol (1266.5141 without restraints) Performing minimization step: 4590. Total energy = 1268.2925 kcal/mol (1266.4790 without restraints) Performing minimization step: 4591. Total energy = 1268.2570 kcal/mol (1266.4437 without restraints) Performing minimization step: 4592. Total energy = 1268.2216 kcal/mol (1266.4084 without restraints) Performing minimization step: 4593. Total energy = 1268.1857 kcal/mol (1266.3727 without restraints) Performing minimization step: 4594. Total energy = 1268.1503 kcal/mol (1266.3374 without restraints) Performing minimization step: 4595. Total energy = 1268.1149 kcal/mol (1266.3022 without restraints) Performing minimization step: 4596. Total energy = 1268.0796 kcal/mol (1266.2670 without restraints) Performing minimization step: 4597. Total energy = 1268.0442 kcal/mol (1266.2317 without restraints) Performing minimization step: 4598. Total energy = 1268.0091 kcal/mol (1266.1967 without restraints) Performing minimization step: 4599. Total energy = 1267.9737 kcal/mol (1266.1615 without restraints) Performing minimization step: 4600. Total energy = 1267.9384 kcal/mol (1266.1263 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/f42e8b68/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 4601. Total energy = 1267.9027 kcal/mol (1266.0908 without restraints) Performing minimization step: 4602. Total energy = 1267.8674 kcal/mol (1266.0556 without restraints) Performing minimization step: 4603. Total energy = 1267.8320 kcal/mol (1266.0204 without restraints) Performing minimization step: 4604. Total energy = 1267.7965 kcal/mol (1265.9851 without restraints) Performing minimization step: 4605. Total energy = 1267.7615 kcal/mol (1265.9502 without restraints) Performing minimization step: 4606. Total energy = 1267.7262 kcal/mol (1265.9150 without restraints) Performing minimization step: 4607. Total energy = 1267.6908 kcal/mol (1265.8798 without restraints) Performing minimization step: 4608. Total energy = 1267.6556 kcal/mol (1265.8447 without restraints) Performing minimization step: 4609. Total energy = 1267.6204 kcal/mol (1265.8096 without restraints) Performing minimization step: 4610. Total energy = 1267.5851 kcal/mol (1265.7745 without restraints) Performing minimization step: 4611. Total energy = 1267.5499 kcal/mol (1265.7395 without restraints) Performing minimization step: 4612. Total energy = 1267.5145 kcal/mol (1265.7042 without restraints) Performing minimization step: 4613. Total energy = 1267.4794 kcal/mol (1265.6692 without restraints) Performing minimization step: 4614. Total energy = 1267.4442 kcal/mol (1265.6341 without restraints) Performing minimization step: 4615. Total energy = 1267.4090 kcal/mol (1265.5991 without restraints) Performing minimization step: 4616. Total energy = 1267.3738 kcal/mol (1265.5641 without restraints) Performing minimization step: 4617. Total energy = 1267.3387 kcal/mol (1265.5291 without restraints) Performing minimization step: 4618. Total energy = 1267.3037 kcal/mol (1265.4943 without restraints) Performing minimization step: 4619. Total energy = 1267.2686 kcal/mol (1265.4593 without restraints) Performing minimization step: 4620. Total energy = 1267.2336 kcal/mol (1265.4245 without restraints) Performing minimization step: 4621. Total energy = 1267.1986 kcal/mol (1265.3896 without restraints) Performing minimization step: 4622. Total energy = 1267.1635 kcal/mol (1265.3546 without restraints) Performing minimization step: 4623. Total energy = 1267.1284 kcal/mol (1265.3197 without restraints) Performing minimization step: 4624. Total energy = 1267.0932 kcal/mol (1265.2846 without restraints) Performing minimization step: 4625. Total energy = 1267.0582 kcal/mol (1265.2498 without restraints) Performing minimization step: 4626. Total energy = 1267.0233 kcal/mol (1265.2149 without restraints) Performing minimization step: 4627. Total energy = 1266.9882 kcal/mol (1265.1800 without restraints) Performing minimization step: 4628. Total energy = 1266.9532 kcal/mol (1265.1451 without restraints) Performing minimization step: 4629. Total energy = 1266.9182 kcal/mol (1265.1103 without restraints) Performing minimization step: 4630. Total energy = 1266.8830 kcal/mol (1265.0752 without restraints) Performing minimization step: 4631. Total energy = 1266.8480 kcal/mol (1265.0404 without restraints) Performing minimization step: 4632. Total energy = 1266.8133 kcal/mol (1265.0058 without restraints) Performing minimization step: 4633. Total energy = 1266.7783 kcal/mol (1264.9709 without restraints) Performing minimization step: 4634. Total energy = 1266.7431 kcal/mol (1264.9359 without restraints) Performing minimization step: 4635. Total energy = 1266.7080 kcal/mol (1264.9008 without restraints) Performing minimization step: 4636. Total energy = 1266.6730 kcal/mol (1264.8661 without restraints) Performing minimization step: 4637. Total energy = 1266.6382 kcal/mol (1264.8315 without restraints) Performing minimization step: 4638. Total energy = 1266.6034 kcal/mol (1264.7967 without restraints) Performing minimization step: 4639. Total energy = 1266.5685 kcal/mol (1264.7620 without restraints) Performing minimization step: 4640. Total energy = 1266.5338 kcal/mol (1264.7274 without restraints) Performing minimization step: 4641. Total energy = 1266.4989 kcal/mol (1264.6927 without restraints) Performing minimization step: 4642. Total energy = 1266.4641 kcal/mol (1264.6580 without restraints) Performing minimization step: 4643. Total energy = 1266.4296 kcal/mol (1264.6237 without restraints) Performing minimization step: 4644. Total energy = 1266.3948 kcal/mol (1264.5890 without restraints) Performing minimization step: 4645. Total energy = 1266.3600 kcal/mol (1264.5543 without restraints) Performing minimization step: 4646. Total energy = 1266.3251 kcal/mol (1264.5196 without restraints) Performing minimization step: 4647. Total energy = 1266.2903 kcal/mol (1264.4849 without restraints) Performing minimization step: 4648. Total energy = 1266.2553 kcal/mol (1264.4500 without restraints) Performing minimization step: 4649. Total energy = 1266.2210 kcal/mol (1264.4158 without restraints) Performing minimization step: 4650. Total energy = 1266.1863 kcal/mol (1264.3814 without restraints) Performing minimization step: 4651. Total energy = 1266.1516 kcal/mol (1264.3468 without restraints) Performing minimization step: 4652. Total energy = 1266.1173 kcal/mol (1264.3125 without restraints) Performing minimization step: 4653. Total energy = 1266.0825 kcal/mol (1264.2779 without restraints) Performing minimization step: 4654. Total energy = 1266.0478 kcal/mol (1264.2434 without restraints) Performing minimization step: 4655. Total energy = 1266.0131 kcal/mol (1264.2088 without restraints) Performing minimization step: 4656. Total energy = 1265.9783 kcal/mol (1264.1742 without restraints) Performing minimization step: 4657. Total energy = 1265.9436 kcal/mol (1264.1396 without restraints) Performing minimization step: 4658. Total energy = 1265.9089 kcal/mol (1264.1050 without restraints) Performing minimization step: 4659. Total energy = 1265.8744 kcal/mol (1264.0707 without restraints) Performing minimization step: 4660. Total energy = 1265.8397 kcal/mol (1264.0361 without restraints) Performing minimization step: 4661. Total energy = 1265.8055 kcal/mol (1264.0020 without restraints) Performing minimization step: 4662. Total energy = 1265.7709 kcal/mol (1263.9676 without restraints) Performing minimization step: 4663. Total energy = 1265.7363 kcal/mol (1263.9331 without restraints) Performing minimization step: 4664. Total energy = 1265.7017 kcal/mol (1263.8986 without restraints) Performing minimization step: 4665. Total energy = 1265.6671 kcal/mol (1263.8642 without restraints) Performing minimization step: 4666. Total energy = 1265.6325 kcal/mol (1263.8297 without restraints) Performing minimization step: 4667. Total energy = 1265.5976 kcal/mol (1263.7950 without restraints) Performing minimization step: 4668. Total energy = 1265.5628 kcal/mol (1263.7603 without restraints) Performing minimization step: 4669. Total energy = 1265.5283 kcal/mol (1263.7259 without restraints) Performing minimization step: 4670. Total energy = 1265.4937 kcal/mol (1263.6915 without restraints) Performing minimization step: 4671. Total energy = 1265.4591 kcal/mol (1263.6570 without restraints) Performing minimization step: 4672. Total energy = 1265.4245 kcal/mol (1263.6226 without restraints) Performing minimization step: 4673. Total energy = 1265.3900 kcal/mol (1263.5882 without restraints) Performing minimization step: 4674. Total energy = 1265.3555 kcal/mol (1263.5538 without restraints) Performing minimization step: 4675. Total energy = 1265.3209 kcal/mol (1263.5194 without restraints) Performing minimization step: 4676. Total energy = 1265.2864 kcal/mol (1263.4850 without restraints) Performing minimization step: 4677. Total energy = 1265.2519 kcal/mol (1263.4507 without restraints) Performing minimization step: 4678. Total energy = 1265.2177 kcal/mol (1263.4166 without restraints) Performing minimization step: 4679. Total energy = 1265.1832 kcal/mol (1263.3822 without restraints) Performing minimization step: 4680. Total energy = 1265.1488 kcal/mol (1263.3479 without restraints) Performing minimization step: 4681. Total energy = 1265.1143 kcal/mol (1263.3136 without restraints) Performing minimization step: 4682. Total energy = 1265.0799 kcal/mol (1263.2793 without restraints) Performing minimization step: 4683. Total energy = 1265.0452 kcal/mol (1263.2448 without restraints) Performing minimization step: 4684. Total energy = 1265.0109 kcal/mol (1263.2106 without restraints) Performing minimization step: 4685. Total energy = 1264.9765 kcal/mol (1263.1763 without restraints) Performing minimization step: 4686. Total energy = 1264.9421 kcal/mol (1263.1420 without restraints) Performing minimization step: 4687. Total energy = 1264.9077 kcal/mol (1263.1078 without restraints) Performing minimization step: 4688. Total energy = 1264.8733 kcal/mol (1263.0735 without restraints) Performing minimization step: 4689. Total energy = 1264.8389 kcal/mol (1263.0393 without restraints) Performing minimization step: 4690. Total energy = 1264.8045 kcal/mol (1263.0051 without restraints) Performing minimization step: 4691. Total energy = 1264.7704 kcal/mol (1262.9710 without restraints) Performing minimization step: 4692. Total energy = 1264.7360 kcal/mol (1262.9368 without restraints) Performing minimization step: 4693. Total energy = 1264.7019 kcal/mol (1262.9028 without restraints) Performing minimization step: 4694. Total energy = 1264.6676 kcal/mol (1262.8686 without restraints) Performing minimization step: 4695. Total energy = 1264.6333 kcal/mol (1262.8345 without restraints) Performing minimization step: 4696. Total energy = 1264.5990 kcal/mol (1262.8003 without restraints) Performing minimization step: 4697. Total energy = 1264.5645 kcal/mol (1262.7659 without restraints) Performing minimization step: 4698. Total energy = 1264.5302 kcal/mol (1262.7318 without restraints) Performing minimization step: 4699. Total energy = 1264.4955 kcal/mol (1262.6972 without restraints) Performing minimization step: 4700. Total energy = 1264.4612 kcal/mol (1262.6631 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/f42e8b68/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 4701. Total energy = 1264.4274 kcal/mol (1262.6294 without restraints) Performing minimization step: 4702. Total energy = 1264.3932 kcal/mol (1262.5953 without restraints) Performing minimization step: 4703. Total energy = 1264.3591 kcal/mol (1262.5614 without restraints) Performing minimization step: 4704. Total energy = 1264.3249 kcal/mol (1262.5273 without restraints) Performing minimization step: 4705. Total energy = 1264.2907 kcal/mol (1262.4932 without restraints) Performing minimization step: 4706. Total energy = 1264.2565 kcal/mol (1262.4592 without restraints) Performing minimization step: 4707. Total energy = 1264.2223 kcal/mol (1262.4251 without restraints) Performing minimization step: 4708. Total energy = 1264.1881 kcal/mol (1262.3911 without restraints) Performing minimization step: 4709. Total energy = 1264.1537 kcal/mol (1262.3568 without restraints) Performing minimization step: 4710. Total energy = 1264.1196 kcal/mol (1262.3228 without restraints) Performing minimization step: 4711. Total energy = 1264.0855 kcal/mol (1262.2888 without restraints) Performing minimization step: 4712. Total energy = 1264.0517 kcal/mol (1262.2552 without restraints) Performing minimization step: 4713. Total energy = 1264.0176 kcal/mol (1262.2212 without restraints) Performing minimization step: 4714. Total energy = 1263.9838 kcal/mol (1262.1876 without restraints) Performing minimization step: 4715. Total energy = 1263.9498 kcal/mol (1262.1537 without restraints) Performing minimization step: 4716. Total energy = 1263.9158 kcal/mol (1262.1197 without restraints) Performing minimization step: 4717. Total energy = 1263.8815 kcal/mol (1262.0857 without restraints) Performing minimization step: 4718. Total energy = 1263.8474 kcal/mol (1262.0517 without restraints) Performing minimization step: 4719. Total energy = 1263.8134 kcal/mol (1262.0178 without restraints) Performing minimization step: 4720. Total energy = 1263.7793 kcal/mol (1261.9839 without restraints) Performing minimization step: 4721. Total energy = 1263.7454 kcal/mol (1261.9502 without restraints) Performing minimization step: 4722. Total energy = 1263.7118 kcal/mol (1261.9167 without restraints) Performing minimization step: 4723. Total energy = 1263.6778 kcal/mol (1261.8828 without restraints) Performing minimization step: 4724. Total energy = 1263.6438 kcal/mol (1261.8489 without restraints) Performing minimization step: 4725. Total energy = 1263.6098 kcal/mol (1261.8150 without restraints) Performing minimization step: 4726. Total energy = 1263.5757 kcal/mol (1261.7811 without restraints) Performing minimization step: 4727. Total energy = 1263.5417 kcal/mol (1261.7472 without restraints) Performing minimization step: 4728. Total energy = 1263.5078 kcal/mol (1261.7134 without restraints) Performing minimization step: 4729. Total energy = 1263.4738 kcal/mol (1261.6796 without restraints) Performing minimization step: 4730. Total energy = 1263.4402 kcal/mol (1261.6461 without restraints) Performing minimization step: 4731. Total energy = 1263.4064 kcal/mol (1261.6127 without restraints) Performing minimization step: 4732. Total energy = 1263.3729 kcal/mol (1261.5791 without restraints) Performing minimization step: 4733. Total energy = 1263.3390 kcal/mol (1261.5453 without restraints) Performing minimization step: 4734. Total energy = 1263.3050 kcal/mol (1261.5115 without restraints) Performing minimization step: 4735. Total energy = 1263.2709 kcal/mol (1261.4775 without restraints) Performing minimization step: 4736. Total energy = 1263.2370 kcal/mol (1261.4437 without restraints) Performing minimization step: 4737. Total energy = 1263.2032 kcal/mol (1261.4100 without restraints) Performing minimization step: 4738. Total energy = 1263.1693 kcal/mol (1261.3762 without restraints) Performing minimization step: 4739. Total energy = 1263.1356 kcal/mol (1261.3426 without restraints) Performing minimization step: 4740. Total energy = 1263.1018 kcal/mol (1261.3091 without restraints) Performing minimization step: 4741. Total energy = 1263.0680 kcal/mol (1261.2754 without restraints) Performing minimization step: 4742. Total energy = 1263.0342 kcal/mol (1261.2417 without restraints) Performing minimization step: 4743. Total energy = 1263.0004 kcal/mol (1261.2080 without restraints) Performing minimization step: 4744. Total energy = 1262.9666 kcal/mol (1261.1743 without restraints) Performing minimization step: 4745. Total energy = 1262.9327 kcal/mol (1261.1406 without restraints) Performing minimization step: 4746. Total energy = 1262.8990 kcal/mol (1261.1070 without restraints) Performing minimization step: 4747. Total energy = 1262.8652 kcal/mol (1261.0733 without restraints) Performing minimization step: 4748. Total energy = 1262.8314 kcal/mol (1261.0397 without restraints) Performing minimization step: 4749. Total energy = 1262.7978 kcal/mol (1261.0063 without restraints) Performing minimization step: 4750. Total energy = 1262.7641 kcal/mol (1260.9726 without restraints) Performing minimization step: 4751. Total energy = 1262.7303 kcal/mol (1260.9390 without restraints) Performing minimization step: 4752. Total energy = 1262.6967 kcal/mol (1260.9056 without restraints) Performing minimization step: 4753. Total energy = 1262.6631 kcal/mol (1260.8720 without restraints) Performing minimization step: 4754. Total energy = 1262.6296 kcal/mol (1260.8387 without restraints) Performing minimization step: 4755. Total energy = 1262.5959 kcal/mol (1260.8051 without restraints) Performing minimization step: 4756. Total energy = 1262.5621 kcal/mol (1260.7715 without restraints) Performing minimization step: 4757. Total energy = 1262.5282 kcal/mol (1260.7377 without restraints) Performing minimization step: 4758. Total energy = 1262.4946 kcal/mol (1260.7042 without restraints) Performing minimization step: 4759. Total energy = 1262.4609 kcal/mol (1260.6706 without restraints) Performing minimization step: 4760. Total energy = 1262.4272 kcal/mol (1260.6371 without restraints) Performing minimization step: 4761. Total energy = 1262.3935 kcal/mol (1260.6035 without restraints) Performing minimization step: 4762. Total energy = 1262.3599 kcal/mol (1260.5700 without restraints) Performing minimization step: 4763. Total energy = 1262.3263 kcal/mol (1260.5366 without restraints) Performing minimization step: 4764. Total energy = 1262.2931 kcal/mol (1260.5035 without restraints) Performing minimization step: 4765. Total energy = 1262.2596 kcal/mol (1260.4702 without restraints) Performing minimization step: 4766. Total energy = 1262.2261 kcal/mol (1260.4367 without restraints) Performing minimization step: 4767. Total energy = 1262.1922 kcal/mol (1260.4030 without restraints) Performing minimization step: 4768. Total energy = 1262.1586 kcal/mol (1260.3696 without restraints) Performing minimization step: 4769. Total energy = 1262.1250 kcal/mol (1260.3361 without restraints) Performing minimization step: 4770. Total energy = 1262.0914 kcal/mol (1260.3026 without restraints) Performing minimization step: 4771. Total energy = 1262.0579 kcal/mol (1260.2692 without restraints) Performing minimization step: 4772. Total energy = 1262.0241 kcal/mol (1260.2355 without restraints) Performing minimization step: 4773. Total energy = 1261.9906 kcal/mol (1260.2022 without restraints) Performing minimization step: 4774. Total energy = 1261.9570 kcal/mol (1260.1686 without restraints) Performing minimization step: 4775. Total energy = 1261.9234 kcal/mol (1260.1352 without restraints) Performing minimization step: 4776. Total energy = 1261.8901 kcal/mol (1260.1020 without restraints) Performing minimization step: 4777. Total energy = 1261.8566 kcal/mol (1260.0687 without restraints) Performing minimization step: 4778. Total energy = 1261.8233 kcal/mol (1260.0355 without restraints) Performing minimization step: 4779. Total energy = 1261.7898 kcal/mol (1260.0021 without restraints) Performing minimization step: 4780. Total energy = 1261.7563 kcal/mol (1259.9688 without restraints) Performing minimization step: 4781. Total energy = 1261.7229 kcal/mol (1259.9357 without restraints) Performing minimization step: 4782. Total energy = 1261.6896 kcal/mol (1259.9024 without restraints) Performing minimization step: 4783. Total energy = 1261.6567 kcal/mol (1259.8696 without restraints) Performing minimization step: 4784. Total energy = 1261.6236 kcal/mol (1259.8366 without restraints) Performing minimization step: 4785. Total energy = 1261.5902 kcal/mol (1259.8033 without restraints) Performing minimization step: 4786. Total energy = 1261.5568 kcal/mol (1259.7701 without restraints) Performing minimization step: 4787. Total energy = 1261.5234 kcal/mol (1259.7369 without restraints) Performing minimization step: 4788. Total energy = 1261.4900 kcal/mol (1259.7036 without restraints) Performing minimization step: 4789. Total energy = 1261.4567 kcal/mol (1259.6704 without restraints) Performing minimization step: 4790. Total energy = 1261.4233 kcal/mol (1259.6371 without restraints) Performing minimization step: 4791. Total energy = 1261.3900 kcal/mol (1259.6039 without restraints) Performing minimization step: 4792. Total energy = 1261.3566 kcal/mol (1259.5707 without restraints) Performing minimization step: 4793. Total energy = 1261.3231 kcal/mol (1259.5373 without restraints) Performing minimization step: 4794. Total energy = 1261.2898 kcal/mol (1259.5041 without restraints) Performing minimization step: 4795. Total energy = 1261.2565 kcal/mol (1259.4711 without restraints) Performing minimization step: 4796. Total energy = 1261.2233 kcal/mol (1259.4379 without restraints) Performing minimization step: 4797. Total energy = 1261.1900 kcal/mol (1259.4047 without restraints) Performing minimization step: 4798. Total energy = 1261.1567 kcal/mol (1259.3716 without restraints) Performing minimization step: 4799. Total energy = 1261.1234 kcal/mol (1259.3384 without restraints) Performing minimization step: 4800. Total energy = 1261.0902 kcal/mol (1259.3053 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/f42e8b68/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 4801. Total energy = 1261.0569 kcal/mol (1259.2721 without restraints) Performing minimization step: 4802. Total energy = 1261.0236 kcal/mol (1259.2390 without restraints) Performing minimization step: 4803. Total energy = 1260.9904 kcal/mol (1259.2059 without restraints) Performing minimization step: 4804. Total energy = 1260.9572 kcal/mol (1259.1728 without restraints) Performing minimization step: 4805. Total energy = 1260.9240 kcal/mol (1259.1397 without restraints) Performing minimization step: 4806. Total energy = 1260.8910 kcal/mol (1259.1069 without restraints) Performing minimization step: 4807. Total energy = 1260.8578 kcal/mol (1259.0738 without restraints) Performing minimization step: 4808. Total energy = 1260.8244 kcal/mol (1259.0405 without restraints) Performing minimization step: 4809. Total energy = 1260.7912 kcal/mol (1259.0075 without restraints) Performing minimization step: 4810. Total energy = 1260.7580 kcal/mol (1258.9744 without restraints) Performing minimization step: 4811. Total energy = 1260.7248 kcal/mol (1258.9414 without restraints) Performing minimization step: 4812. Total energy = 1260.6916 kcal/mol (1258.9083 without restraints) Performing minimization step: 4813. Total energy = 1260.6585 kcal/mol (1258.8753 without restraints) Performing minimization step: 4814. Total energy = 1260.6253 kcal/mol (1258.8423 without restraints) Performing minimization step: 4815. Total energy = 1260.5922 kcal/mol (1258.8093 without restraints) Performing minimization step: 4816. Total energy = 1260.5591 kcal/mol (1258.7763 without restraints) Performing minimization step: 4817. Total energy = 1260.5260 kcal/mol (1258.7433 without restraints) Performing minimization step: 4818. Total energy = 1260.4930 kcal/mol (1258.7106 without restraints) Performing minimization step: 4819. Total energy = 1260.4605 kcal/mol (1258.6781 without restraints) Performing minimization step: 4820. Total energy = 1260.4274 kcal/mol (1258.6451 without restraints) Performing minimization step: 4821. Total energy = 1260.3942 kcal/mol (1258.6120 without restraints) Performing minimization step: 4822. Total energy = 1260.3609 kcal/mol (1258.5789 without restraints) Performing minimization step: 4823. Total energy = 1260.3278 kcal/mol (1258.5459 without restraints) Performing minimization step: 4824. Total energy = 1260.2949 kcal/mol (1258.5132 without restraints) Performing minimization step: 4825. Total energy = 1260.2619 kcal/mol (1258.4801 without restraints) Performing minimization step: 4826. Total energy = 1260.2287 kcal/mol (1258.4472 without restraints) Performing minimization step: 4827. Total energy = 1260.1957 kcal/mol (1258.4143 without restraints) Performing minimization step: 4828. Total energy = 1260.1627 kcal/mol (1258.3814 without restraints) Performing minimization step: 4829. Total energy = 1260.1297 kcal/mol (1258.3486 without restraints) Performing minimization step: 4830. Total energy = 1260.0967 kcal/mol (1258.3157 without restraints) Performing minimization step: 4831. Total energy = 1260.0637 kcal/mol (1258.2828 without restraints) Performing minimization step: 4832. Total energy = 1260.0305 kcal/mol (1258.2496 without restraints) Performing minimization step: 4833. Total energy = 1259.9974 kcal/mol (1258.2168 without restraints) Performing minimization step: 4834. Total energy = 1259.9646 kcal/mol (1258.1842 without restraints) Performing minimization step: 4835. Total energy = 1259.9318 kcal/mol (1258.1514 without restraints) Performing minimization step: 4836. Total energy = 1259.8988 kcal/mol (1258.1186 without restraints) Performing minimization step: 4837. Total energy = 1259.8659 kcal/mol (1258.0858 without restraints) Performing minimization step: 4838. Total energy = 1259.8330 kcal/mol (1258.0530 without restraints) Performing minimization step: 4839. Total energy = 1259.8001 kcal/mol (1258.0202 without restraints) Performing minimization step: 4840. Total energy = 1259.7672 kcal/mol (1257.9875 without restraints) Performing minimization step: 4841. Total energy = 1259.7343 kcal/mol (1257.9547 without restraints) Performing minimization step: 4842. Total energy = 1259.7016 kcal/mol (1257.9220 without restraints) Performing minimization step: 4843. Total energy = 1259.6686 kcal/mol (1257.8892 without restraints) Performing minimization step: 4844. Total energy = 1259.6358 kcal/mol (1257.8565 without restraints) Performing minimization step: 4845. Total energy = 1259.6030 kcal/mol (1257.8239 without restraints) Performing minimization step: 4846. Total energy = 1259.5700 kcal/mol (1257.7910 without restraints) Performing minimization step: 4847. Total energy = 1259.5369 kcal/mol (1257.7580 without restraints) Performing minimization step: 4848. Total energy = 1259.5043 kcal/mol (1257.7255 without restraints) Performing minimization step: 4849. Total energy = 1259.4716 kcal/mol (1257.6930 without restraints) Performing minimization step: 4850. Total energy = 1259.4389 kcal/mol (1257.6604 without restraints) Performing minimization step: 4851. Total energy = 1259.4061 kcal/mol (1257.6277 without restraints) Performing minimization step: 4852. Total energy = 1259.3732 kcal/mol (1257.5950 without restraints) Performing minimization step: 4853. Total energy = 1259.3405 kcal/mol (1257.5624 without restraints) Performing minimization step: 4854. Total energy = 1259.3077 kcal/mol (1257.5297 without restraints) Performing minimization step: 4855. Total energy = 1259.2749 kcal/mol (1257.4971 without restraints) Performing minimization step: 4856. Total energy = 1259.2421 kcal/mol (1257.4644 without restraints) Performing minimization step: 4857. Total energy = 1259.2098 kcal/mol (1257.4322 without restraints) Performing minimization step: 4858. Total energy = 1259.1775 kcal/mol (1257.4000 without restraints) Performing minimization step: 4859. Total energy = 1259.1447 kcal/mol (1257.3674 without restraints) Performing minimization step: 4860. Total energy = 1259.1120 kcal/mol (1257.3348 without restraints) Performing minimization step: 4861. Total energy = 1259.0793 kcal/mol (1257.3022 without restraints) Performing minimization step: 4862. Total energy = 1259.0466 kcal/mol (1257.2696 without restraints) Performing minimization step: 4863. Total energy = 1259.0139 kcal/mol (1257.2371 without restraints) Performing minimization step: 4864. Total energy = 1258.9812 kcal/mol (1257.2045 without restraints) Performing minimization step: 4865. Total energy = 1258.9486 kcal/mol (1257.1720 without restraints) Performing minimization step: 4866. Total energy = 1258.9159 kcal/mol (1257.1394 without restraints) Performing minimization step: 4867. Total energy = 1258.8835 kcal/mol (1257.1071 without restraints) Performing minimization step: 4868. Total energy = 1258.8510 kcal/mol (1257.0748 without restraints) Performing minimization step: 4869. Total energy = 1258.8184 kcal/mol (1257.0423 without restraints) Performing minimization step: 4870. Total energy = 1258.7858 kcal/mol (1257.0098 without restraints) Performing minimization step: 4871. Total energy = 1258.7531 kcal/mol (1256.9773 without restraints) Performing minimization step: 4872. Total energy = 1258.7205 kcal/mol (1256.9448 without restraints) Performing minimization step: 4873. Total energy = 1258.6879 kcal/mol (1256.9123 without restraints) Performing minimization step: 4874. Total energy = 1258.6551 kcal/mol (1256.8796 without restraints) Performing minimization step: 4875. Total energy = 1258.6225 kcal/mol (1256.8471 without restraints) Performing minimization step: 4876. Total energy = 1258.5899 kcal/mol (1256.8147 without restraints) Performing minimization step: 4877. Total energy = 1258.5571 kcal/mol (1256.7820 without restraints) Performing minimization step: 4878. Total energy = 1258.5243 kcal/mol (1256.7494 without restraints) Performing minimization step: 4879. Total energy = 1258.4918 kcal/mol (1256.7170 without restraints) Performing minimization step: 4880. Total energy = 1258.4595 kcal/mol (1256.6850 without restraints) Performing minimization step: 4881. Total energy = 1258.4274 kcal/mol (1256.6528 without restraints) Performing minimization step: 4882. Total energy = 1258.3948 kcal/mol (1256.6203 without restraints) Performing minimization step: 4883. Total energy = 1258.3623 kcal/mol (1256.5879 without restraints) Performing minimization step: 4884. Total energy = 1258.3298 kcal/mol (1256.5556 without restraints) Performing minimization step: 4885. Total energy = 1258.2973 kcal/mol (1256.5232 without restraints) Performing minimization step: 4886. Total energy = 1258.2650 kcal/mol (1256.4910 without restraints) Performing minimization step: 4887. Total energy = 1258.2325 kcal/mol (1256.4586 without restraints) Performing minimization step: 4888. Total energy = 1258.2002 kcal/mol (1256.4265 without restraints) Performing minimization step: 4889. Total energy = 1258.1678 kcal/mol (1256.3942 without restraints) Performing minimization step: 4890. Total energy = 1258.1353 kcal/mol (1256.3618 without restraints) Performing minimization step: 4891. Total energy = 1258.1030 kcal/mol (1256.3297 without restraints) Performing minimization step: 4892. Total energy = 1258.0708 kcal/mol (1256.2976 without restraints) Performing minimization step: 4893. Total energy = 1258.0383 kcal/mol (1256.2652 without restraints) Performing minimization step: 4894. Total energy = 1258.0058 kcal/mol (1256.2327 without restraints) Performing minimization step: 4895. Total energy = 1257.9733 kcal/mol (1256.2005 without restraints) Performing minimization step: 4896. Total energy = 1257.9407 kcal/mol (1256.1680 without restraints) Performing minimization step: 4897. Total energy = 1257.9084 kcal/mol (1256.1358 without restraints) Performing minimization step: 4898. Total energy = 1257.8762 kcal/mol (1256.1037 without restraints) Performing minimization step: 4899. Total energy = 1257.8439 kcal/mol (1256.0717 without restraints) Performing minimization step: 4900. Total energy = 1257.8118 kcal/mol (1256.0398 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/f42e8b68/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. Performing minimization step: 4901. Total energy = 1257.7797 kcal/mol (1256.0076 without restraints) Performing minimization step: 4902. Total energy = 1257.7473 kcal/mol (1255.9753 without restraints) Performing minimization step: 4903. Total energy = 1257.7152 kcal/mol (1255.9434 without restraints) Performing minimization step: 4904. Total energy = 1257.6829 kcal/mol (1255.9112 without restraints) Performing minimization step: 4905. Total energy = 1257.6506 kcal/mol (1255.8790 without restraints) Performing minimization step: 4906. Total energy = 1257.6185 kcal/mol (1255.8470 without restraints) Performing minimization step: 4907. Total energy = 1257.5862 kcal/mol (1255.8148 without restraints) Performing minimization step: 4908. Total energy = 1257.5539 kcal/mol (1255.7827 without restraints) Performing minimization step: 4909. Total energy = 1257.5218 kcal/mol (1255.7507 without restraints) Performing minimization step: 4910. Total energy = 1257.4894 kcal/mol (1255.7183 without restraints) Performing minimization step: 4911. Total energy = 1257.4570 kcal/mol (1255.6861 without restraints) Performing minimization step: 4912. Total energy = 1257.4247 kcal/mol (1255.6540 without restraints) Performing minimization step: 4913. Total energy = 1257.3924 kcal/mol (1255.6218 without restraints) Performing minimization step: 4914. Total energy = 1257.3602 kcal/mol (1255.5897 without restraints) Performing minimization step: 4915. Total energy = 1257.3279 kcal/mol (1255.5575 without restraints) Performing minimization step: 4916. Total energy = 1257.2957 kcal/mol (1255.5254 without restraints) Performing minimization step: 4917. Total energy = 1257.2635 kcal/mol (1255.4933 without restraints) Performing minimization step: 4918. Total energy = 1257.2312 kcal/mol (1255.4612 without restraints) Performing minimization step: 4919. Total energy = 1257.1990 kcal/mol (1255.4292 without restraints) Performing minimization step: 4920. Total energy = 1257.1668 kcal/mol (1255.3971 without restraints) Performing minimization step: 4921. Total energy = 1257.1345 kcal/mol (1255.3648 without restraints) Performing minimization step: 4922. Total energy = 1257.1023 kcal/mol (1255.3328 without restraints) Performing minimization step: 4923. Total energy = 1257.0701 kcal/mol (1255.3007 without restraints) Performing minimization step: 4924. Total energy = 1257.0379 kcal/mol (1255.2687 without restraints) Performing minimization step: 4925. Total energy = 1257.0058 kcal/mol (1255.2367 without restraints) Performing minimization step: 4926. Total energy = 1256.9736 kcal/mol (1255.2046 without restraints) Performing minimization step: 4927. Total energy = 1256.9415 kcal/mol (1255.1726 without restraints) Performing minimization step: 4928. Total energy = 1256.9094 kcal/mol (1255.1406 without restraints) Performing minimization step: 4929. Total energy = 1256.8772 kcal/mol (1255.1086 without restraints) Performing minimization step: 4930. Total energy = 1256.8451 kcal/mol (1255.0766 without restraints) Performing minimization step: 4931. Total energy = 1256.8130 kcal/mol (1255.0446 without restraints) Performing minimization step: 4932. Total energy = 1256.7810 kcal/mol (1255.0128 without restraints) Performing minimization step: 4933. Total energy = 1256.7490 kcal/mol (1254.9809 without restraints) Performing minimization step: 4934. Total energy = 1256.7171 kcal/mol (1254.9490 without restraints) Performing minimization step: 4935. Total energy = 1256.6850 kcal/mol (1254.9171 without restraints) Performing minimization step: 4936. Total energy = 1256.6530 kcal/mol (1254.8852 without restraints) Performing minimization step: 4937. Total energy = 1256.6209 kcal/mol (1254.8533 without restraints) Performing minimization step: 4938. Total energy = 1256.5889 kcal/mol (1254.8213 without restraints) Performing minimization step: 4939. Total energy = 1256.5570 kcal/mol (1254.7896 without restraints) Performing minimization step: 4940. Total energy = 1256.5250 kcal/mol (1254.7577 without restraints) Performing minimization step: 4941. Total energy = 1256.4929 kcal/mol (1254.7258 without restraints) Performing minimization step: 4942. Total energy = 1256.4610 kcal/mol (1254.6939 without restraints) Performing minimization step: 4943. Total energy = 1256.4293 kcal/mol (1254.6624 without restraints) Performing minimization step: 4944. Total energy = 1256.3974 kcal/mol (1254.6305 without restraints) Performing minimization step: 4945. Total energy = 1256.3654 kcal/mol (1254.5987 without restraints) Performing minimization step: 4946. Total energy = 1256.3334 kcal/mol (1254.5668 without restraints) Performing minimization step: 4947. Total energy = 1256.3014 kcal/mol (1254.5349 without restraints) Performing minimization step: 4948. Total energy = 1256.2695 kcal/mol (1254.5031 without restraints) Performing minimization step: 4949. Total energy = 1256.2374 kcal/mol (1254.4713 without restraints) Performing minimization step: 4950. Total energy = 1256.2058 kcal/mol (1254.4397 without restraints) Performing minimization step: 4951. Total energy = 1256.1741 kcal/mol (1254.4081 without restraints) Performing minimization step: 4952. Total energy = 1256.1421 kcal/mol (1254.3763 without restraints) Performing minimization step: 4953. Total energy = 1256.1102 kcal/mol (1254.3445 without restraints) Performing minimization step: 4954. Total energy = 1256.0783 kcal/mol (1254.3127 without restraints) Performing minimization step: 4955. Total energy = 1256.0464 kcal/mol (1254.2810 without restraints) Performing minimization step: 4956. Total energy = 1256.0148 kcal/mol (1254.2494 without restraints) Performing minimization step: 4957. Total energy = 1255.9829 kcal/mol (1254.2177 without restraints) Performing minimization step: 4958. Total energy = 1255.9506 kcal/mol (1254.1855 without restraints) Performing minimization step: 4959. Total energy = 1255.9186 kcal/mol (1254.1536 without restraints) Performing minimization step: 4960. Total energy = 1255.8867 kcal/mol (1254.1218 without restraints) Performing minimization step: 4961. Total energy = 1255.8548 kcal/mol (1254.0901 without restraints) Performing minimization step: 4962. Total energy = 1255.8230 kcal/mol (1254.0583 without restraints) Performing minimization step: 4963. Total energy = 1255.7912 kcal/mol (1254.0267 without restraints) Performing minimization step: 4964. Total energy = 1255.7593 kcal/mol (1253.9949 without restraints) Performing minimization step: 4965. Total energy = 1255.7277 kcal/mol (1253.9634 without restraints) Performing minimization step: 4966. Total energy = 1255.6958 kcal/mol (1253.9316 without restraints) Performing minimization step: 4967. Total energy = 1255.6641 kcal/mol (1253.9001 without restraints) Performing minimization step: 4968. Total energy = 1255.6323 kcal/mol (1253.8684 without restraints) Performing minimization step: 4969. Total energy = 1255.6005 kcal/mol (1253.8367 without restraints) Performing minimization step: 4970. Total energy = 1255.5688 kcal/mol (1253.8052 without restraints) Performing minimization step: 4971. Total energy = 1255.5371 kcal/mol (1253.7735 without restraints) Performing minimization step: 4972. Total energy = 1255.5053 kcal/mol (1253.7419 without restraints) Performing minimization step: 4973. Total energy = 1255.4736 kcal/mol (1253.7104 without restraints) Performing minimization step: 4974. Total energy = 1255.4420 kcal/mol (1253.6788 without restraints) Performing minimization step: 4975. Total energy = 1255.4102 kcal/mol (1253.6472 without restraints) Performing minimization step: 4976. Total energy = 1255.3788 kcal/mol (1253.6158 without restraints) Performing minimization step: 4977. Total energy = 1255.3472 kcal/mol (1253.5844 without restraints) Performing minimization step: 4978. Total energy = 1255.3156 kcal/mol (1253.5529 without restraints) Performing minimization step: 4979. Total energy = 1255.2840 kcal/mol (1253.5215 without restraints) Performing minimization step: 4980. Total energy = 1255.2524 kcal/mol (1253.4901 without restraints) Performing minimization step: 4981. Total energy = 1255.2209 kcal/mol (1253.4585 without restraints) Performing minimization step: 4982. Total energy = 1255.1892 kcal/mol (1253.4269 without restraints) Performing minimization step: 4983. Total energy = 1255.1575 kcal/mol (1253.3954 without restraints) Performing minimization step: 4984. Total energy = 1255.1257 kcal/mol (1253.3637 without restraints) Performing minimization step: 4985. Total energy = 1255.0939 kcal/mol (1253.3321 without restraints) Performing minimization step: 4986. Total energy = 1255.0623 kcal/mol (1253.3005 without restraints) Performing minimization step: 4987. Total energy = 1255.0306 kcal/mol (1253.2690 without restraints) Performing minimization step: 4988. Total energy = 1254.9989 kcal/mol (1253.2374 without restraints) Performing minimization step: 4989. Total energy = 1254.9672 kcal/mol (1253.2057 without restraints) Performing minimization step: 4990. Total energy = 1254.9354 kcal/mol (1253.1742 without restraints) Performing minimization step: 4991. Total energy = 1254.9040 kcal/mol (1253.1428 without restraints) Performing minimization step: 4992. Total energy = 1254.8724 kcal/mol (1253.1113 without restraints) Performing minimization step: 4993. Total energy = 1254.8408 kcal/mol (1253.0799 without restraints) Performing minimization step: 4994. Total energy = 1254.8092 kcal/mol (1253.0484 without restraints) Performing minimization step: 4995. Total energy = 1254.7774 kcal/mol (1253.0168 without restraints) Performing minimization step: 4996. Total energy = 1254.7458 kcal/mol (1252.9853 without restraints) Performing minimization step: 4997. Total energy = 1254.7143 kcal/mol (1252.9538 without restraints) Performing minimization step: 4998. Total energy = 1254.6827 kcal/mol (1252.9224 without restraints) Performing minimization step: 4999. Total energy = 1254.6512 kcal/mol (1252.8911 without restraints) Performing minimization step: 5000. Total energy = 1254.6196 kcal/mol (1252.8595 without restraints) Writing PDB file: /home/ubuntu/rna-tools/rna_tools/tools/webserver-engine/media/jobs/f42e8b68/tmp/ENST00000618027_refx/ENST00000618027_refx.pdb ...Done. /home/ubuntu/rna-tools//opt/qrnas/ Save to ENST00000618027_refx.pdb DONE!