method: all-atom-built-in
target: mHER_H3_AgNeg_unique_fv_0_igfoldCDRH3_ONLY.pdb
of models: 1
Traceback (most recent call last):
  File "/home/ubuntu/miniconda3/bin/rna_calc_rmsd.py", line 7, in <module>
    exec(compile(f.read(), __file__, 'exec'))
  File "/home/ubuntu/rna-tools/rna_tools/tools/rna_calc_rmsd/rna_calc_rmsd.py", line 358, in <module>
    rmsd_curr, atoms = calc_rmsd(r1, target_fn, target_selection, target_ignore_selection, model_selection, model_ignore_selection, args.way, args.verbose)
  File "/home/ubuntu/rna-tools/rna_tools/tools/rna_calc_rmsd/rna_calc_rmsd.py", line 193, in calc_rmsd
    atomsP, P = get_coordinates(a, model_selection, model_ignore_selection, 'pdb', True, way)
  File "/home/ubuntu/rna-tools/rna_tools/tools/rna_calc_rmsd/lib/rmsd/calculate_rmsd.py", line 106, in get_coordinates
    return get_coordinates_pdb(filename, selection, ignore_selection, ignore_hydrogens, way)
  File "/home/ubuntu/rna-tools/rna_tools/tools/rna_calc_rmsd/lib/rmsd/calculate_rmsd.py", line 162, in get_coordinates_pdb
    curr_resi = int(line[22:26])
ValueError: invalid literal for int() with base 10: '4.76'
DONE!