files from another job e.g., 614e0a1b
The raw output files for each step of the pipeline can be found here and downloaded as a ZIP file here.
"Analysis with X3DNA” provides various detailed statistics for PDB files such as a list of RNA elements (helixes, stems, motifs, nucleotide modifications) and configuration of base pairs.
X.-J. Lu, H. J. Bussemaker, and W. K. Olson, “DSSR: an integrated software tool for dissecting the spatial structure of RNA.,” Nucleic Acids Research, vol. 43, no. 21, p. e142, Dec. 2015.
We are exploring using https://piwik.pro to track usage of the server for grant proposals, scientific presentations. Please write to us if there is any problem with your job mail us [behind Apple Hide My Mail]. You can also write an empty mail to sign to our Google Group to ask questions and shape the tools! Join our Google Group or write an empty e-mail to rna-tools+subscribe@googlegroups.com.