Standardize your PDB files

Get rnapuzzle ready structure. Clean up a structure, get standardized order of atoms. This is also the submission format required for the RNA Puzzles.

files from another job e.g., 614e0a1b

The raw output files for each step of the pipeline can be found here and downloaded as a ZIP file here.


Demo files "missing_op1op2_r43OK.pdb", applied fix "- add the missing OP1 and OP2 in chain: A residue # 44", chains are renamed to ABC, renumber residues if you want with the checkbox.

We are exploring using https://piwik.pro to track usage of the server for grant proposals, scientific presentations.
Please write to us if there is any problem with your job mail us [behind Apple Hide My Mail].
You can also write an empty mail to sign to our Google Group to ask questions and shape the tools! Join our Google Group or write an empty e-mail to rna-tools+subscribe@googlegroups.com.